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Detection and Prevalence of Coronaviruses in European Bats: A Systematic Review. 欧洲蝙蝠中冠状病毒的检测和流行情况:系统综述。
IF 2.2 3区 环境科学与生态学 Q3 ENVIRONMENTAL SCIENCES Pub Date : 2024-12-01 Epub Date: 2024-11-23 DOI: 10.1007/s10393-024-01688-5
Mahima Hemnani, Priscilla Gomes da Silva, Gertrude Thompson, Patrícia Poeta, Hugo Rebelo, João R Mesquita

Bats are known hosts for a wide range of coronaviruses (CoVs), including those that cause severe acute respiratory syndrome (SARS-CoV-1) and Middle East respiratory syndrome (MERS-CoV). With the emergence of the COVID-19 pandemic caused by the SARS-CoV-2 virus, it has become increasingly important to understand the diversity and prevalence of CoVs in bat populations. This systematic review aimed to compile studies that have sampled CoVs from bats across Europe and assessed various aspects related to the testing of bat samples, including the country where the bats were collected, the CoV genomic region studied, the CoV genera that were detected, and the identification of bat species that were found to be carrying CoV. We identified 30 studies that assessed CoVs presence in bats across multiple countries including Italy, Germany, and various other nations with one or two studies each, which tested them for CoVs using a variety of matrices. CoVs were found in nine genera of bats, and the genomic regions included RdRp, ORF1a gene, as well as full genome, detecting α- and/or β-CoVs, with most of them being detectable only in faeces. This review provides a comprehensive overview of the CoVs detected in bats across Europe and highlights the importance of continued surveillance and monitoring of bat populations for potential emerging zoonotic CoVs.

众所周知,蝙蝠是多种冠状病毒(CoV)的宿主,其中包括导致严重急性呼吸系统综合征(SARS-CoV-1)和中东呼吸系统综合征(MERS-CoV)的冠状病毒。随着由 SARS-CoV-2 病毒引起的 COVID-19 大流行的出现,了解蝙蝠种群中 CoV 的多样性和流行率变得越来越重要。本系统综述旨在汇编从欧洲各地的蝙蝠中采集 CoV 样本的研究,并评估与检测蝙蝠样本相关的各个方面,包括采集蝙蝠的国家、研究的 CoV 基因组区域、检测到的 CoV 属种以及发现携带 CoV 的蝙蝠物种的鉴定。我们发现有 30 项研究评估了多个国家(包括意大利、德国和其他多个国家)的蝙蝠体内是否存在 CoV,每项研究有一项或两项,这些研究使用各种矩阵对蝙蝠进行了 CoV 检测。在九种蝙蝠属中发现了 CoVs,基因组区域包括 RdRp、ORF1a 基因和全基因组,检测到了α-和/或 β-CoVs,其中大多数只在粪便中检测到。本综述全面概述了在欧洲各地的蝙蝠中检测到的 CoV,并强调了继续监视和监测蝙蝠种群中潜在的新出现的人畜共患 CoV 的重要性。
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引用次数: 0
Spatial examination of social and environmental drivers of Middle East respiratory syndrome coronavirus (MERS-CoV) across Kenya. 对肯尼亚各地中东呼吸综合征冠状病毒(MERS-CoV)的社会和环境驱动因素进行空间研究。
IF 2.2 3区 环境科学与生态学 Q3 ENVIRONMENTAL SCIENCES Pub Date : 2024-12-01 Epub Date: 2024-06-25 DOI: 10.1007/s10393-024-01684-9
Ted J Lawrence, Geoffrey K Kangogo, Avery Fredman, Sharon L Deem, Eric M Fèvre, Ilona Gluecks, James D Brien, Enbal Shacham

Climate and agricultural land-use change has increased the likelihood of infectious disease emergence and transmissions, but these drivers are often examined separately as combined effects are ignored. Further, seldom are the influence of climate and agricultural land use on emerging infectious diseases examined in a spatially explicit way at regional scales. Our objective in this study was to spatially examine the climate, agriculture, and socio-demographic factors related to agro-pastoralism, and especially the combined effects of these variables that can influence the prevalence of Middle East respiratory syndrome coronavirus (MERS-CoV) in dromedary camels across northern Kenya. Our research questions focused on: (1) How MERS-CoV in dromedary camels has varied across geographic regions of northern Kenya, and (2) what climate, agriculture, and socio-demographic factors of agro-pastoralism were spatially related to the geographic variation of MERS-CoV cases in dromedary camels. To answer our questions, we analyzed the spatial distribution of historical cases based on serological evidence of MERS-CoV at the county level and applied spatial statistical analysis to examine the spatial relationships of the MERS-CoV cases between 2016 and 2018 to climate, agriculture, and socio-demographic factors of agro-pastoralism. Regional differences in MERS-CoV cases were spatially correlated with both social and environmental factors, and particularly ethno-religious camel practices, which highlight the complexity in the distribution of MERS-CoV in dromedary camels across Kenya.

气候和农业用地的变化增加了传染病出现和传播的可能性,但这些驱动因素往往被单独研究,而综合效应则被忽视。此外,很少在区域范围内以空间明确的方式研究气候和农业用地对新发传染病的影响。我们这项研究的目的是在空间上考察与农牧业相关的气候、农业和社会人口因素,尤其是这些变量的综合效应,它们可能会影响肯尼亚北部单峰骆驼中中东呼吸综合征冠状病毒(MERS-CoV)的流行。我们的研究问题主要集中在:(1)单峰骆驼中的 MERS-CoV 在肯尼亚北部不同地理区域的变化情况,以及(2)农牧业的气候、农业和社会人口因素与单峰骆驼中 MERS-CoV 病例的地理变化有何空间关系。为了回答我们的问题,我们根据县级MERS-CoV血清学证据分析了历史病例的空间分布,并应用空间统计分析法研究了2016年至2018年间MERS-CoV病例与气候、农业和农牧业社会人口因素的空间关系。MERS-CoV病例的地区差异与社会和环境因素,特别是民族宗教骆驼习俗存在空间相关性,这凸显了MERS-CoV在肯尼亚全国单峰骆驼中分布的复杂性。
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引用次数: 0
Correction to: Foodborne Zoonoses Common in Hunted Wild Boars. 更正:狩猎野猪中常见的食源性动物鼻子
IF 2.2 3区 环境科学与生态学 Q3 ENVIRONMENTAL SCIENCES Pub Date : 2024-12-01 Epub Date: 2022-03-18 DOI: 10.1007/s10393-022-01585-9
Maria Fredriksson-Ahomaa, Laura London, Teresa Skrzypczak, Tuija Kantala, Ilona Laamanen, Mia Biström, Leena Maunula, Tuija Gadd
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引用次数: 0
Pastoralism and Resulting Challenges for National Parks in Afar, Ethiopia. 埃塞俄比亚阿法尔地区的畜牧业及其给国家公园带来的挑战。
IF 2.2 3区 环境科学与生态学 Q3 ENVIRONMENTAL SCIENCES Pub Date : 2024-12-01 Epub Date: 2024-05-31 DOI: 10.1007/s10393-024-01687-6
Samson Abebe, Hamere Melaku, Ashenafi GebreGiorgis Kidanu, Rea Tschopp

Pastoralists and national parks are key stakeholders in the management and conservation of natural and protected habitats. In Ethiopia, Afar pastoralists migrate seasonally with their livestock in search for grazing and water areas. Livestock are also a source of infectious diseases that can spread into wildlife populations when pastoralists encroach into unfenced national parks. The interactions between pastoralists and national parks, as well as the subsequent impacts, remain insufficiently understood in Afar. Two structured questionnaire surveys were conducted in 2021, including 300 pastoralist households in seven woredas of Afar, and 58 staff from three national parks (Awash, Alidegi and Yangudi Rassa). They captured pastoralist movements and livestock diseases as well as the perception of national park staff regarding challenges resulting from pastoral encroachment into parks. Among the pastoralists, 74.7% migrated with their livestock for a mean 3.5 months per year, during which time, 90% of respondents reported contact with other livestock herds, and over 80% with wildlife. A third (34.2%) reported disease outbreaks in their village prior to migration. Pastoralists traveled long distances, crossing woreda, regional or national boundaries. All 58-park respondents reported pastoralists with livestock inside their park and their close contact with wildlife. Additionally, 69% reported the presence of domestic dogs. Wildlife displacement, habitat loss and dog attacks on wildlife were perceived as the main threat caused by the presence of pastoralists, whereas diseases were only mentioned by 15.5%. Overall, park staff showed poor disease knowledge. They reported poor disease surveillance and no disease response. Within pastoral contexts, improved collaboration between wildlife and livestock authorities regarding land use, disease awareness and surveillance is needed to balance the needs of both wildlife and pastoralist's livestock development and mitigate threats to wildlife habitats.

牧民和国家公园是管理和保护自然栖息地和受保护栖息地的主要利益相关者。在埃塞俄比亚,阿法尔牧民带着牲畜季节性迁徙,寻找牧场和水源。牲畜也是传染病的来源之一,当牧民侵入没有围栏的国家公园时,传染病就会传播到野生动物种群中。在阿法尔地区,人们对牧民与国家公园之间的互动以及随之产生的影响仍然了解不足。2021 年进行了两次结构化问卷调查,调查对象包括阿法尔七个区的 300 户牧民和三个国家公园(阿瓦士、阿利德吉和扬古迪拉萨)的 58 名工作人员。他们了解了牧民的流动和牲畜疾病情况,以及国家公园工作人员对牧民侵占公园所带来的挑战的看法。在牧民中,74.7% 的人每年与牲畜一起迁徙的时间平均为 3.5 个月,在此期间,90% 的受访者表示与其他畜群有接触,80% 以上的受访者表示与野生动物有接触。三分之一(34.2%)的受访者报告说,迁徙前他们所在的村庄爆发了疾病。牧民长途跋涉,跨越县、地区或国家边界。所有 58 个公园的受访者都报告说,牧民在公园内饲养牲畜,并与野生动物密切接触。此外,69% 的受访者称公园内有家犬。野生动物流离失所、栖息地丧失和狗对野生动物的攻击被认为是牧民的存在造成的主要威胁,而提到疾病的只有 15.5%。总体而言,公园工作人员对疾病的了解较少。他们报告说,疾病监测不力,也没有疾病应对措施。在牧区,野生动物和畜牧业管理部门需要在土地使用、疾病意识和监测方面加强合作,以平衡野生动物和牧民畜牧业发展的需求,减轻对野生动物栖息地的威胁。
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引用次数: 0
Large-Scale Serological Survey of Influenza A Virus in South Korean Wild Boar (Sus scrofa). 南韩野猪(Sus scrofa)甲型流感病毒大规模血清学调查。
IF 2.2 3区 环境科学与生态学 Q3 ENVIRONMENTAL SCIENCES Pub Date : 2024-12-01 Epub Date: 2024-06-06 DOI: 10.1007/s10393-024-01685-8
Bud Jung, Minjoo Yeom, Dong-Jun An, Aram Kang, Thi Thu Hang Vu, Woonsung Na, Youngjoo Byun, Daesub Song

In this comprehensive large-scale study, conducted from 2015 to 2019, 7,209 wild boars across South Korea were sampled to assess their exposure to influenza A viruses (IAVs). Of these, 250 (3.5%) were found to be IAV-positive by ELISA, and 150 (2.1%) by the hemagglutination inhibition test. Detected subtypes included 23 cases of pandemic 2009 H1N1, six of human seasonal H3N2, three of classical swine H1N1, 13 of triple-reassortant swine H1N2, seven of triple-reassortant swine H3N2, and seven of swine-origin H3N2 variant. Notably, none of the serum samples tested positive for avian IAV subtypes H3N8, H5N3, H7N7, and H9N2 or canine IAV subtype H3N2. This serologic analysis confirmed the exposure of Korean wild boars to various subtypes of swine and human influenza viruses, with some serum samples cross-reacting between swine and human strains, indicating potential infections with multiple IAVs. The results highlight the potential of wild boar as a novel mixing vessel, facilitating the adaptation of IAVs and their spillover to other hosts, including humans. In light of these findings, we recommend regular and frequent surveillance of circulating influenza viruses in the wild boar population as a proactive measure to prevent potential human influenza pandemics and wild boar influenza epizootics.

在这项从2015年到2019年进行的大规模综合研究中,对韩国各地的7209头野猪进行了采样,以评估它们接触甲型流感病毒(IAV)的情况。其中,250 头(3.5%)野猪通过酶联免疫吸附试验(ELISA)检测出 IAV 阳性,150 头(2.1%)通过血凝抑制试验检测出 IAV 阳性。检测到的亚型包括 23 例 2009 年大流行 H1N1、6 例人类季节性 H3N2、3 例典型猪 H1N1、13 例三重变异猪 H1N2、7 例三重变异猪 H3N2 和 7 例猪源 H3N2 变异型。值得注意的是,没有一个血清样本对禽类 IAV 亚型 H3N8、H5N3、H7N7 和 H9N2 或犬 IAV 亚型 H3N2 检测呈阳性。这项血清学分析证实,韩国野猪接触过各种亚型的猪流感病毒和人流感病毒,一些血清样本在猪毒株和人毒株之间出现交叉反应,表明可能感染了多种 IAV。这些结果凸显了野猪作为新型混合容器的潜力,有助于 IAV 的适应和向包括人类在内的其他宿主扩散。鉴于这些发现,我们建议对野猪群体中流行的流感病毒进行定期和频繁的监测,以此作为预防潜在的人类流感大流行和野猪流感流行的积极措施。
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引用次数: 0
Correction: Aetiology and Potential Animal Exposure in Central Nervous System Infections in Vietnam. 更正:越南中枢神经系统感染的病因和潜在动物接触。
IF 2.2 3区 环境科学与生态学 Q3 ENVIRONMENTAL SCIENCES Pub Date : 2024-12-01 Epub Date: 2022-11-22 DOI: 10.1007/s10393-022-01618-3
Hannah E Brindle, Behzad Nadjm, Marc Choisy, Rob Christley, Michael Griffiths, Stephen Baker, Juliet E Bryant, James I Campbell, Van Vinh Chau Nguyen, Thi Ngoc Diep Nguyen, Ty Thi Hang Vu, Van Hung Nguyen, Bao Long Hoang, Xuan Luat Le, Ha My Pham, Thi Dieu Ngan Ta, Dang Trung Nghia Ho, Thua Nguyen Tran, Thi Han Ny Nguyen, My Phuc Tran, Thi Hong Phuong Pham, Van Tan Le, Dac Thuan Nguyen, Thi Thu Trang Hau, Ngoc Vinh Nguyen, Heiman F L Wertheim, Guy E Thwaites, H Rogier van Doorn
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引用次数: 0
Correction: The Impact of Drought on HIV Care in Rural South Africa: An Interrupted Time Series Analysis. 更正:干旱对南非农村艾滋病毒护理的影响:中断的时间序列分析。
IF 2.2 3区 环境科学与生态学 Q3 ENVIRONMENTAL SCIENCES Pub Date : 2024-12-01 Epub Date: 2023-09-02 DOI: 10.1007/s10393-023-01648-5
Collins C Iwuji, Kathy Baisley, Molulaqhooa Linda Maoyi, Kingsley Orievulu, Lusanda Mazibuko, Sonja Ayeb-Karlsson, H Manisha Yapa, Willem Hanekom, Kobus Herbst, Dominic Kniveton
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引用次数: 0
Evaluating the Risk Landscape of Hawaiian Monk Seal Exposure to Toxoplasma gondii. 评估夏威夷僧海豹接触弓形虫的风险状况。
IF 2.2 3区 环境科学与生态学 Q3 ENVIRONMENTAL SCIENCES Pub Date : 2024-12-01 Epub Date: 2024-06-08 DOI: 10.1007/s10393-024-01678-7
Stacie Robinson, Kim Falinski, Devin Johnson, Elizabeth VanWormer, Karen Shapiro, Angela Amlin, Michelle Barbieri

Toxoplasmosis is a disease of primary concern for Hawaiian monk seals (Neomonachus schauinslandi), due to its apparently acute lethality and especially heavy impacts on breeding female seals. The disease-causing parasite, Toxoplasma gondii, depends on cats to complete its life cycle; thus, in order to understand how this pathogen infects marine mammals, it is essential to understand aspects of the terrestrial ecosystem and land-to-sea transport. In this study, we constructed a three-tiered model to assess risk of Hawaiian monk seal exposure to T. gondii oocysts: (1) oocyst contamination as a function of cat population characteristics; (2) land-to-sea transport of oocysts as a function of island hydrology, and (3) seal exposure as a function of habitat and space use. We were able to generate risk maps highlighting watersheds contributing the most to oocyst contamination of Hawaiian monk seal habitat. Further, the model showed that free-roaming cats most associated with humans (pets or strays often supplementally fed by people) were able to achieve high densities leading to high levels of oocyst contamination and elevated risk of T. gondii exposure.

弓形虫病是夏威夷僧海豹(Neomonachus schauinslandi)最关心的一种疾病,因为它显然具有急性致死性,对繁殖期雌海豹的影响尤其严重。致病寄生虫弓形虫依靠猫来完成其生命周期;因此,为了了解这种病原体是如何感染海洋哺乳动物的,了解陆地生态系统和陆地到海洋运输的各个方面至关重要。在这项研究中,我们构建了一个三层模型来评估夏威夷僧海豹暴露于 T. gondii 卵囊的风险:(1) 卵囊污染是猫群特征的函数;(2) 卵囊从陆地到海洋的迁移是岛屿水文的函数;(3) 海豹暴露于栖息地和空间使用的函数。我们能够生成风险地图,突出显示对夏威夷僧海豹栖息地造成卵囊污染最严重的流域。此外,该模型还显示,与人类关系最密切的自由漫步的猫(宠物或经常由人类喂养的流浪猫)能够达到很高的密度,从而导致卵囊污染水平很高,并增加了暴露于刚地氏菌的风险。
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引用次数: 0
Local Economic Conditions Affect Aedes albopictus Management 当地经济状况对白纹伊蚊管理的影响
IF 2.5 3区 环境科学与生态学 Q3 ENVIRONMENTAL SCIENCES Pub Date : 2024-04-24 DOI: 10.1007/s10393-024-01682-x
Jacopo Cerri, Chiara Sciandra, Tania Contardo, Sandro Bertolino

Invasive mosquitoes are an emerging public health issue, as many species are competent vectors for pathogens. We assessed how multiple environmental and socio-economic factors affected the engagement of municipalities in Italy (n = 7679) in actions against Aedes albopictus, an invasive mosquito affecting human health and well-being, between 2000 and 2020. We collected information about mosquito control from official documents and municipal websites and modeled the role played by multiple environmental and socioeconomic factors characterizing each municipality through the random forest algorithm. Municipalities are more prone to manage A. albopictus if more urbanized, in lowlands and with long infestation periods. Moreover, these variables are more predictive of management in municipalities with a high median income and thus more economic resources. Only 25.5% of Italian municipalities approved regulations for managing A. albopictus, and very few of them were in Southern Italy, the most deprived area of the country. Our findings indicate that local economic conditions moderate the effect of other drivers of mosquito control and ultimately can lead to better management of A. albopictus. If the management of invasive mosquitoes, or other forms of global change, is subjected to local economic conditions, economic inequalities will jeopardize the success of large-scale policies, also raising issues of environmental and climate justice.

入侵蚊子是一个新出现的公共卫生问题,因为许多种类的蚊子都是病原体的传播媒介。我们评估了多种环境和社会经济因素如何影响意大利市政当局(n = 7679)在 2000 年至 2020 年间参与防治白纹伊蚊(一种影响人类健康和福祉的入侵蚊子)的行动。我们从官方文件和市政网站上收集了有关蚊虫控制的信息,并通过随机森林算法模拟了每个城市的多种环境和社会经济因素所发挥的作用。如果城市化程度较高、地处低洼、蚊虫侵扰时间较长,那么这些城市就更容易控制白纹伊蚊。此外,在收入中位数较高、经济资源较多的城市,这些变量对管理的预测性更高。只有 25.5% 的意大利市政当局批准了白纹伊蚊管理条例,而且其中只有极少数位于意大利南部,即该国最贫困的地区。我们的研究结果表明,当地的经济条件可以缓和其他蚊虫控制驱动因素的影响,最终可以更好地管理白纹伊蚊。如果对入侵蚊虫或其他形式的全球变化的管理受制于当地经济条件,经济不平等将危及大规模政策的成功,同时也会引发环境和气候正义问题。
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引用次数: 0
Chlamydia psittaci Screening of Animal Workers from Argentina Exposed to Carrier Birds 对接触带菌鸟类的阿根廷动物工人进行鹦鹉热衣原体筛查
IF 2.5 3区 环境科学与生态学 Q3 ENVIRONMENTAL SCIENCES Pub Date : 2024-04-18 DOI: 10.1007/s10393-024-01683-w
Patricio Favier, Guillermo M. Wiemeyer, Maite B. Arias, Claudia S. Lara, Gabriela Vilar, Ana J. Crivelli, Herman K. Ludvik, María I. Ardiles, María L. Teijeiro, María J. Madariaga, María J. Rolón, María E. Cadario

Different syndromes are involved in human psittacosis (flu-like syndrome, atypical pneumonia up to lacrimal gland lymphoma). Diagnostic methods include serology, culture, and PCR. The rate of Chlamydia psittaci (Cp) positive tests among exposed workers is still unknown. Our study aimed to assess the rate of positive tests among workers who have contact with carrier birds in natural reserves from Buenos Aires, Argentina. Secondary aims were to analyze risk factors linked to these outcomes and the occurrence of signs that suggest psittacosis. Nasopharyngeal swabs and serum pairs were collected from employees who had interacted with confirmed carrier birds. Those with detectable DNA of Cp and/or anti-Chlamydia spp. antibody baseline titer ≥ 160 mUI/ml, or at least quadruplicating, were considered positive. Activities performed with or near birds, personal protective equipment use, and previous chronic conditions were assessed. Possible Cp-related pathologies were evaluated during follow-up. A total of 63 exposed workers (71.4% men) with a median age of 35.7 years (IQR 26–39) were evaluated to detect 28.6% positives. Respiratory chronic conditions were the unique factor associated with positive tests (OR 5.2 [1.5–18.5] p < .05). Surprisingly, about a third of the workers resulted positive and all responded to medical treatment, none developing an acute atypical pneumonia syndrome associated with classical presentation of psittacosis. Active testing for early diagnosis and proper treatment in zoological workers exposed to carrier or potentially carrier birds is strongly suggested as part of zoonotic diseases preventive measures.

人类鹦鹉热涉及不同的综合征(流感样综合征、非典型肺炎直至泪腺淋巴瘤)。诊断方法包括血清学、培养和 PCR。在接触该疾病的工人中,鹦鹉热衣原体(Cp)检测呈阳性的比例尚不清楚。我们的研究旨在评估阿根廷布宜诺斯艾利斯自然保护区内与带菌鸟类有接触的工人中的阳性检测率。次要目的是分析与这些结果相关的风险因素以及提示鹦鹉热的体征。研究人员从曾与确诊的带毒鸟类接触过的员工身上采集了鼻咽拭子和血清配对样本。凡检测到 Cp DNA 和/或抗衣原体抗体基线滴度≥ 160 mUI/ml,或至少四倍以上者,均被视为阳性。对与鸟类一起或在鸟类附近从事的活动、个人防护设备的使用以及以前的慢性病进行了评估。在随访期间对可能与 Cp 相关的病症进行了评估。共评估了 63 名接触过 Cp 的工人(71.4% 为男性),他们的中位年龄为 35.7 岁(IQR 为 26-39),其中 28.6% 呈阳性。呼吸道慢性疾病是与检测结果呈阳性相关的唯一因素(OR 5.2 [1.5-18.5] p <.05)。令人惊讶的是,约有三分之一的工人检测结果呈阳性,并且全部接受了治疗,没有人出现与鹦鹉热典型表现相关的急性非典型肺炎综合征。作为人畜共患病预防措施的一部分,我们强烈建议对接触带菌或潜在带菌鸟类的动物园工作人员进行积极检测,以便早期诊断和适当治疗。
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引用次数: 0
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