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A model combined with the atmospheric deposition flux to predict the accumulation of cadmium in rice (Oryza sativa L.) grain 结合大气沉降通量预测水稻籽粒镉积累的模型
IF 5.2 2区 农林科学 Q1 AGRICULTURE, MULTIDISCIPLINARY Pub Date : 2025-11-14 DOI: 10.1186/s40538-025-00875-y
Zhaoyue Liu, Fan Wang, Wenjun Yang, Liang Peng, Xiao Deng, Yang Yang, Qingru Zeng, Si Luo

Background

Hunan Province, a major rice-producing region in China, faces severe cadmium (Cd) contamination in rice grains. Cd, a heavy toxic metal, accumulates in rice through the soil–rice system, posing health risks via the food chain. Effective management relies on identifying pollution sources to guide targeted control and reduction strategies.

Results

Through the data collected over the past 5 years across four different regions, a multiple linear regression model was established to explore the effects of those factors influencing Cd accumulation in rice tissues, including the input fluxes of soil Cd, atmospheric deposition Cd (DICd), irrigation water Cd (IRCd), and fertilizer Cd (CFCd). Atmospheric deposition was identified as a major source of Cd input, with a higher annual average input flux than irrigation water and fertilizers. In the industrial and mining zone Zhuzhou, atmospheric deposition accounted for 96.42% of the total Cd input. In the regions with an increasing level of atmospheric deposition, Cd exhibited higher soil Cd concentrations but lower pH. Total soil Cd (TCd) concentrations demonstrated a significant positive correlation with both soil available Cd (ACd) concentrations and DICd. Additionally, TCd and DICd were determined to be the critical factors affecting the accumulation of Cd in rice tissues.

Conclusions

As indicated by the results, the spatial variation in rice Cd accumulation resulted from various sources of Cd input, highlighting the necessity to closely monitor Cd input fluxes across various regions. This study provides a benchmark for understanding the impact of atmospheric deposition on Cd accumulation in rice grains.

Graphical Abstract

背景:湖南省是中国水稻主产区,稻谷镉污染严重。镉是一种重金属,通过土壤-水稻系统在水稻中积累,通过食物链构成健康风险。有效的管理依赖于识别污染源,以指导有针对性的控制和减少战略。结果通过4个不同地区近5年的数据,建立多元线性回归模型,探讨土壤Cd输入通量、大气沉降Cd (DICd)、灌溉水Cd (IRCd)和肥料Cd (CFCd)对水稻组织Cd积累的影响。大气沉降是Cd输入的主要来源,其年平均输入通量高于灌溉水和肥料。株洲工矿区大气沉降占Cd输入总量的96.42%。土壤总Cd (TCd)浓度与土壤有效Cd (ACd)浓度和土壤有效Cd (DICd)浓度均呈显著正相关。此外,TCd和DICd是影响水稻组织中Cd积累的关键因素。结论不同Cd输入来源对水稻Cd积累的空间影响较大,需要对不同区域Cd输入通量进行密切监测。本研究为了解大气沉降对水稻籽粒Cd积累的影响提供了一个基准。图形抽象
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引用次数: 0
Engineering myxinidin-based supramolecular architectures for advanced antifungal applications in food protection 基于myxinidin的工程超分子结构在食品保护中的高级抗真菌应用
IF 5.2 2区 农林科学 Q1 AGRICULTURE, MULTIDISCIPLINARY Pub Date : 2025-11-13 DOI: 10.1186/s40538-025-00880-1
Simone Braccia, Rosa Bellavita, Oluwasegun Eric Ajayi, Marta Ranesi, Lorenzo Emiliano Imbò, Luca De Stefano, David Turrà, Rosarita Tatè, Camilla Casciello, Principia Dardano, Stefania Vitale, Annarita Falanga, Stefania Galdiero

Background

The antimicrobial peptide WMR-4, a myxinidin-derived sequence with Aib and D-amino acid substitutions, showed enhanced stability and strong antifungal activity against Fusarium oxysporum in vitro.

Results

Biophysical studies indicated a lytic mechanism via deep membrane insertion and leakage. However, free WMR-4 failed to block fungal penetration through cellulose barriers, revealing limits in complex systems. To overcome this, we developed supramolecular nanofibers functionalized with WMR-4 and the cell-penetrating peptide gH625. These nanofibers inhibited germ tube formation, partially reduced cellulose membrane penetration, and provided enhanced protection in biological contexts. Specifically, nanofibers limited opportunistic saprophytic colonization in apple tissues lacking epidermal barriers while preserving tissue integrity in intact tomato models, demonstrating barrier-specific therapeutic protection. SEM and AFM confirmed stable nanoscale coatings integrated into plant epidermal layers.

Conclusions

These results highlight WMR-4 as a potent antifungal candidate and demonstrate the potential of AMP-functionalized supramolecular nanostructures for agricultural applications.

Graphical abstract

抗菌肽WMR-4是由myxinidin衍生的含有Aib和d -氨基酸取代的序列,在体外对尖孢镰刀菌显示出更高的稳定性和较强的抗真菌活性。结果生物物理研究表明其裂解机制为深膜插入和渗漏。然而,游离WMR-4未能阻止真菌通过纤维素屏障的渗透,揭示了在复杂系统中的局限性。为了克服这个问题,我们开发了用WMR-4和细胞穿透肽gH625功能化的超分子纳米纤维。这些纳米纤维抑制了胚管的形成,部分减少了纤维素膜的渗透,并在生物环境中提供了增强的保护。具体来说,纳米纤维限制了机会性腐生菌在缺乏表皮屏障的苹果组织中的定植,同时在完整的番茄模型中保持了组织的完整性,证明了屏障特异性的治疗保护作用。扫描电镜和原子力显微镜证实了稳定的纳米涂层整合到植物表皮层中。结论这些结果表明WMR-4是一种有效的抗真菌候选物质,并证明了amp功能化的超分子纳米结构在农业上的应用潜力。图形抽象
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引用次数: 0
Moderate NO3–-N instead of NH4+-N alleviates the effect of salt stress on walnut growth 以适量NO3—N代替NH4+-N可缓解盐胁迫对核桃生长的影响
IF 5.2 2区 农林科学 Q1 AGRICULTURE, MULTIDISCIPLINARY Pub Date : 2025-11-12 DOI: 10.1186/s40538-025-00881-0
Gaoya Su, Sen Lu, Yongchao Bai, Dong Pei, Yan Wang, Hao Deng

Walnut (Juglans regia L.) is an important oilseed crop, and salt stress threatens the growth of walnut tree. In this study, NO3 or NH4+ was applied at three concentrations (4, 32, and 100 mM) to investigate the effect of NO3-N and NH4+-N on walnut seedlings under 100 mM NaCl stress. Results showed that moderate (32 mM) NO3-N application alleviated the effect of salt stress. Moreover, plants treated with 32 mM NO3-N showed no significant morphological difference from those subjected to the nonstress treatment. The treatment of 32 mM NO3-N application enhanced plant growth, increased antioxidant enzyme activities (superoxide dismutase and catalase), and restricted Na⁺ and Cl⁻ uptake and transport. Additionally, it might induce beneficial shifts in the rhizosphere microbiome. Low-concentration (4 mM) NO3⁻ or NH4⁺ treatment individually induced the minor alleviation of salt stress. By contrast, 100 mM NO3⁻ and all tested concentrations of NH₄⁺ further inhibited biomass and root growth, thereby exacerbating salt injury. Notably, 100 mM NH₄⁺ caused severe defoliation and seedling mortality. Furthermore, in contrast to its NO3 counterpart, 32 mM NH4⁺ shifted the root microbiome and impaired microbial diversity, likely contributing to increased salt sensitivity. This study demonstrates that moderate NO3⁻ application can effectively mitigate salt stress during walnut growth, offering a potential strategy for fertilizing walnut plantations under saline conditions.

Graphical Abstract

核桃(Juglans regia L.)是一种重要的油料作物,盐胁迫威胁着核桃树的生长。在100 mM NaCl胁迫下,以3种浓度(4、32和100 mM)的NO3−和NH4+施用NO3−和NH4+,研究了NO3−和NH4+-N对核桃幼苗的影响。结果表明,适量(32 mM)施用NO3−-N可缓解盐胁迫的影响。此外,32 mM NO3−-N处理的植株与非胁迫处理的植株形态差异不显著。施用32 mM NO3−-N能促进植株生长,提高抗氧化酶(超氧化物歧化酶和过氧化氢酶)活性,限制Na⁺和Cl⁻的吸收和运输。此外,它可能会诱导根际微生物群的有益转变。低浓度(4mm) NO3⁻或NH4⁺单独处理可轻微缓解盐胁迫。相比之下,100 mM NO3⁻和所有测试浓度的NH₄⁺进一步抑制了生物量和根的生长,从而加剧了盐的伤害。值得注意的是,100 mM nh4 +造成了严重的落叶和幼苗死亡率。此外,与NO3−相比,32 mM NH4⁺改变了根微生物组,损害了微生物多样性,可能导致盐敏感性增加。本研究表明,适量使用硝酸(NO3)可以有效地缓解核桃生长过程中的盐胁迫,为盐碱化条件下的核桃园施肥提供了一种潜在的策略。图形抽象
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引用次数: 0
Organically modified biogenic graphene oxide–mesoporous silica nanoparticles for eco-friendly and tailored release of Azadirachtin (neem) biopesticide 有机改性生物源氧化石墨烯-介孔二氧化硅纳米颗粒,用于印楝素(印楝)生物农药的环保和定制释放
IF 5.2 2区 农林科学 Q1 AGRICULTURE, MULTIDISCIPLINARY Pub Date : 2025-11-07 DOI: 10.1186/s40538-025-00879-8
Farzaneh Jokarshourijeh, Leila Ma′mani, Ramin Hossein, Aziz Sheikhigarjan

Herein, a modified biogenic graphene oxide–mesoporous silica hybrid nanoparticle (GO–MSNs) was developed as a reliable and efficient nano-pesticide delivery system (nano-PDS) for the slow release of neem (Azadirachtin, Aza), which is known as an environmentally friendly biopesticide. For this purpose, GO–MSN-based nanocarrier (GO–MSNs) was synthesized using rice husk-derived silica and graphene precursors, followed by surface modification to obtain propyl amine-functionalized GO–MSNs nanocarrier (nano-PDS). The nano-PDS nanocarrier was then characterized and investigated for its potential as a nanoporous host for efficient loading and slow-release pattern of Aza to control the silverleaf whitefly (Bemisia tabaci). The nanostructure and porosity of the synthesized nanocarrier were fully characterized by X-ray diffraction (XRD), electron microscopy (SEM and TEM), thermogravimetric analysis (TGA), and surface area and pore analysis using the Brunauer–Emmett–Teller (BET) and Barrett–Joyner–Halenda (BJH) theories. The loading efficiency was found to depend on nanocarrier characteristics, such as surface area, pore size, functional group, and surface charge. Notably, the interaction between Aza and the amine functional groups found in the nano-PDS led to a more efficient slow-release profile compared to the bare GO–MSNs nanocarrier. The release rate of Aza was analyzed using a UV–visible spectrophotometer at 214 nm. The UV stability, thermal stability, and release behavior as paramount factors in developing a sustainable Aza delivery system were tuned by manipulating the nanocarrier surface. The organically modified biogenic GO–MSNs thus offers promising potential for slow-release and improved efficiency of Aza-based nanobiopesticide in the control of Bemisia tabaci.

Graphical abstract

本研究开发了一种改性的生物源氧化石墨烯-介孔二氧化硅杂化纳米颗粒(GO-MSNs),作为一种可靠高效的纳米农药缓释系统(nano-PDS),用于缓释被称为环境友好型生物农药的印楝(印楝素,Aza)。为此,以稻壳为原料的二氧化硅和石墨烯为前驱体,合成了基于氧化石墨烯的纳米载体(GO-MSNs),然后对其进行表面改性,得到了丙胺功能化的氧化石墨烯纳米载体(nano-PDS)。然后对纳米pds纳米载体进行了表征,并研究了其作为纳米孔载体的潜力,用于高效负载和缓释模式的Aza来控制银叶白蝇(烟粉虱)。采用x射线衍射(XRD)、电子显微镜(SEM和TEM)、热重分析(TGA)、表面积分析(BET)和巴雷特-乔伊纳-哈伦达(BJH)理论对合成的纳米载体的纳米结构和孔隙率进行了全面表征。负载效率取决于纳米载体的特性,如表面积、孔径、官能团和表面电荷。值得注意的是,与GO-MSNs纳米载体相比,纳米pds中Aza和胺官能团之间的相互作用导致了更有效的缓释特性。用紫外可见分光光度计在214 nm处分析Aza的释放速度。紫外稳定性、热稳定性和释放行为是开发可持续的Aza递送系统的最重要因素,通过操纵纳米载体表面来调节。因此,有机修饰的生物源氧化石墨烯纳米粒具有缓释和提高氮杂基纳米农药防治烟粉虱效率的潜力。图形抽象
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引用次数: 0
Rooting for sustainability: Pantoea ananatis D1-28 volatiles boost tomato growth and rhizosphere microbial diversity 为可持续性生根:泛红D1-28挥发物促进番茄生长和根际微生物多样性
IF 5.2 2区 农林科学 Q1 AGRICULTURE, MULTIDISCIPLINARY Pub Date : 2025-11-07 DOI: 10.1186/s40538-025-00882-z
Nan Zeng, Haiyang Gong, Jiahe Pang, Dandan Wang, Ruoyan Ran, Chunji Li, Die Zhao, Xinyue Bi, Zhiyong Zhang, Faryal Babar Baloch, Ning Zhang, Bingxue Li

Background

Tomato (Solanum lycopersicum), a vital global crop rich in bioactive compounds, faces sustainability issues due to agrochemical overuse, necessitating eco-friendly biofertilizers like plant growth-promoting rhizobacteria (PGPR) for sustainable agriculture. This study aimed to identify superior PGPR strains with growth-enhancing volatile organic compounds (VOCs), characterize their VOC profiles, determine optimal VOC doses for growth promotion, and investigate their effects on root architecture, rhizosphere microbiome, and plant transcriptomics to elucidate mechanisms.

Results

Thirteen PGPR strains were screened for VOC-mediated tomato growth promotion. Key strains' VOCs were profiled using GC–MS. Dose-response assays tested core VOCs on growth and root architecture. Rhizosphere microbiome functional compartmentalization was analyzed, and transcriptomic profiling (KEGG pathway enrichment) of VOC-treated plants was performed. Three superior isolates (Pantoea ananatis D1-28, Burkholderia sp. D4-24, Burkholderia territorii D4-36) were identified, with D1-28 notably enhancing lateral roots and shoot biomass. GC–MS revealed strain-specific VOC profiles (31–37 compounds) sharing three core components: dimethyl disulfide (D), 2-nonanone (N), benzothiazole (B). Optimal doses profoundly remodeled root architecture and maximized growth: D (10⁻3 mmol/L), N (1 mmol/L), B (10⁻2 mmol/L). VOCs drove rhizosphere functional compartmentalization, enriching specific taxa. Transcriptomics identified 132 differentially enriched KEGG pathways (130 conserved), primarily linked to auxin biosynthesis, sulfur/nitrogen metabolism, energy metabolism, and carbohydrate metabolism, indicating analogous mechanisms.

Conclusions

This study elucidates for the first time how P. ananatis VOCs coordinate plant hormone signaling, metabolic networks, and rhizosphere microecology to synergistically enhance tomato growth, providing a theoretical foundation for VOC-based green agricultural technologies.

Graphical Abstract

摘要番茄(Solanum lycopersicum)是一种富含生物活性化合物的重要全球作物,由于农用化学品的过度使用,面临着可持续性问题,因此需要促进植物生长的根瘤菌(PGPR)等生态友好型生物肥料来实现可持续农业。本研究旨在鉴定具有促进生长的挥发性有机化合物(VOC)的优良PGPR菌株,表征其VOC谱,确定促进生长的最佳VOC剂量,并研究其对根构型、根际微生物组和植物转录组的影响,以阐明其机制。结果从13株PGPR菌株中筛选出voco介导的番茄促生长菌株。采用气相色谱-质谱分析了关键菌株的挥发性有机化合物。剂量-反应试验测试了核心挥发性有机化合物对生长和根系结构的影响。分析了voco处理植物的根际微生物组功能区隔,并进行了转录组学分析(KEGG途径富集)。鉴定出3个优势菌株(Pantoea ananatis D1-28、Burkholderia sp. D4-24、Burkholderia territorii D4-36),其中D1-28显著提高侧根和茎部生物量。GC-MS显示了菌株特异性VOC谱(31-37个化合物)共享三个核心成分:二甲基二硫(D), 2-壬酮(N),苯并噻唑(B)。最佳剂量可以深刻地重塑根结构并最大限度地促进生长:D (10 - 3 mmol/L), N (1 mmol/L), B (10 - 2 mmol/L)。VOCs驱动根际功能区隔,丰富特定分类群。转录组学鉴定出132个差异富集的KEGG通路(130个保守的),主要与生长素生物合成、硫/氮代谢、能量代谢和碳水化合物代谢有关,表明类似的机制。结论本研究首次阐明了番茄挥发性有机化合物如何协调植物激素信号、代谢网络和根际微生态协同促进番茄生长,为基于挥发性有机化合物的绿色农业技术提供了理论基础。图形抽象
{"title":"Rooting for sustainability: Pantoea ananatis D1-28 volatiles boost tomato growth and rhizosphere microbial diversity","authors":"Nan Zeng,&nbsp;Haiyang Gong,&nbsp;Jiahe Pang,&nbsp;Dandan Wang,&nbsp;Ruoyan Ran,&nbsp;Chunji Li,&nbsp;Die Zhao,&nbsp;Xinyue Bi,&nbsp;Zhiyong Zhang,&nbsp;Faryal Babar Baloch,&nbsp;Ning Zhang,&nbsp;Bingxue Li","doi":"10.1186/s40538-025-00882-z","DOIUrl":"10.1186/s40538-025-00882-z","url":null,"abstract":"<div><h3>Background</h3><p>Tomato (<i>Solanum lycopersicum</i>), a vital global crop rich in bioactive compounds, faces sustainability issues due to agrochemical overuse, necessitating eco-friendly biofertilizers like plant growth-promoting rhizobacteria (PGPR) for sustainable agriculture. This study aimed to identify superior PGPR strains with growth-enhancing volatile organic compounds (VOCs), characterize their VOC profiles, determine optimal VOC doses for growth promotion, and investigate their effects on root architecture, rhizosphere microbiome, and plant transcriptomics to elucidate mechanisms.</p><h3>Results</h3><p>Thirteen PGPR strains were screened for VOC-mediated tomato growth promotion. Key strains' VOCs were profiled using GC–MS. Dose-response assays tested core VOCs on growth and root architecture. Rhizosphere microbiome functional compartmentalization was analyzed, and transcriptomic profiling (KEGG pathway enrichment) of VOC-treated plants was performed. Three superior isolates (<i>Pantoea ananatis</i> D1-28, <i>Burkholderia</i> sp. D4-24, <i>Burkholderia territorii</i> D4-36) were identified, with D1-28 notably enhancing lateral roots and shoot biomass. GC–MS revealed strain-specific VOC profiles (31–37 compounds) sharing three core components: dimethyl disulfide (D), 2-nonanone (N), benzothiazole (B). Optimal doses profoundly remodeled root architecture and maximized growth: D (10⁻<sup>3</sup> mmol/L), N (1 mmol/L), B (10⁻<sup>2</sup> mmol/L). VOCs drove rhizosphere functional compartmentalization, enriching specific taxa. Transcriptomics identified 132 differentially enriched KEGG pathways (130 conserved), primarily linked to auxin biosynthesis, sulfur/nitrogen metabolism, energy metabolism, and carbohydrate metabolism, indicating analogous mechanisms.</p><h3>Conclusions</h3><p>This study elucidates for the first time how <i>P. ananatis</i> VOCs coordinate plant hormone signaling, metabolic networks, and rhizosphere microecology to synergistically enhance tomato growth, providing a theoretical foundation for VOC-based green agricultural technologies.</p><h3>Graphical Abstract</h3>\u0000<div><figure><div><div><picture><source><img></source></picture></div></div></figure></div></div>","PeriodicalId":512,"journal":{"name":"Chemical and Biological Technologies in Agriculture","volume":"12 1","pages":""},"PeriodicalIF":5.2,"publicationDate":"2025-11-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://chembioagro.springeropen.com/counter/pdf/10.1186/s40538-025-00882-z","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145456835","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Nano-encapsulated Litsea cubeba essential oil in chitosan nanoparticles induces toxicological and physiological disruption in Nilaparvata lugens 壳聚糖纳米包封山苍子精油可诱导褐飞虱的毒理学和生理学破坏
IF 5.2 2区 农林科学 Q1 AGRICULTURE, MULTIDISCIPLINARY Pub Date : 2025-11-06 DOI: 10.1186/s40538-025-00860-5
Abid Ali Soomro, Amr Abou El-Ela, Xiao-Xiao Shi, Asim Munawar, Chao Zhang, Naved A. Ansari, Fida H. Magsi, Amr Elkelish, Afrah E. Mohammed, Wen-Wu Zhou, Zeng-Rong Zhu

Background

The brown planthopper (Nilaparvata lugens) is a destructive rice pest in Asia, causing significant yield losses through sap feeding and virus transmission. We developed an eco-friendly nano-encapsulation system using chitosan nanoparticles (CS NPs) loaded with Litsea cubeba essential oil (Lc EO), a potent botanical insecticide. GC–MS analysis identified citral (48.5%) as the dominant component of Lc EO.

Results

CS-Lc NPs (282 nm in diameter) were successfully synthesized via emulsion-ionic gelation, exhibiting enhanced thermal stability and sustained release. Bioassays showed significantly higher insecticidal activity in CS-Lc NPs with LC₅₀ values of 391.41 mg/L at 72 h and 229.14 mg/L at 120 h, compared to unloaded CS NPs (1034.54 mg/L at 72 h and 627.78 mg/L at 120 h). The nano-formulation caused severe damage to the midgut epithelium, as observed through histopathology, elevated salivary flange production, disrupting the activities of detoxification enzymes (POD, SOD, CAT, AChE, AKP, ACP). Molecular analysis confirmed the upregulation of key detoxification genes, with a significant increase in NlCYP6AY1v2 expression, highlighting the enhanced bioavailability and sustained insecticidal activity provided by nano-encapsulation.

Conclusion

CS-Lc NPs enhanced both the stability and bioavailability of Lc EO, significantly improving its efficacy against BPH. This approach offers a promising alternative to reduce reliance on chemical pesticides in rice farming.

Graphical Abstract

褐飞虱(Nilaparvata lugens)是亚洲一种破坏性水稻害虫,通过食液和病毒传播造成重大产量损失。以壳聚糖纳米颗粒(CS NPs)为载体,制备了一种高效的植物性杀虫剂山苍子精油(Lc EO)。GC-MS分析发现柠檬醛(48.5%)为Lc EO的主要成分。结果通过乳状离子凝胶法制备了直径282 nm的scs - lc纳米颗粒,具有较好的热稳定性和缓释性能。生物测定显示,CS- LC NPs的杀虫活性显着提高,LC₅0值在72 h为391.41 mg/L,在120 h为229.14 mg/L,与未装载的CS NPs相比(72 h为1034.54 mg/L, 120 h为627.78 mg/L)。通过组织病理学观察,纳米制剂对中肠上皮造成严重损伤,唾液缘产生升高,解毒酶(POD, SOD, CAT, AChE, AKP, ACP)的活性受到破坏。分子分析证实了关键解毒基因的上调,其中NlCYP6AY1v2的表达显著增加,这表明纳米封装提供了更高的生物利用度和持续的杀虫活性。结论cs -Lc NPs提高了Lc EO的稳定性和生物利用度,显著提高了其抗BPH的效果。这种方法为减少水稻种植对化学农药的依赖提供了一种有希望的替代方法。图形抽象
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引用次数: 0
Supplements enhance antioxidant activity and improve the quality of whole-plant corn silage by altering secondary metabolic pathways and phenolic metabolite composition 添加剂通过改变次级代谢途径和酚类代谢物组成来增强抗氧化活性和改善全株玉米青贮质量
IF 5.2 2区 农林科学 Q1 AGRICULTURE, MULTIDISCIPLINARY Pub Date : 2025-11-04 DOI: 10.1186/s40538-025-00871-2
Xue Chen, Yifan Wang, Xinhe Shan, Xiao Chen, Tingting Jia, Jinze Bao, Lei Wang, Zhe Wu, Zhu Yu

Whole corn silage (WCS) is susceptible to deterioration during storage. However, suitable supplements can enhance active metabolites, which preserve silage quality and feeding value. This study compared the metabolic responses of WCS treated with Lactobacillus buchneri (LB), plant-derived melatonin (ME), and their combination (LB + ME) by evaluating fermentation quality, antioxidant indices, and active metabolites. Compared with that in the control (CK) treatment (348.43 U/g FW), superoxide dismutase (SOD) activity in the LB treatment significantly (p < 0.05) increased to 536.78 U/g FW. Meanwhile, the catalase activity in the ME treatment reached 34.90 nmol/min/g FW, which was significantly (p < 0.05) higher than that in the CK, LB, and LB + ME treatments. Furthermore, 2,2-diphenyl-1-picrylhydrazyl (DPPH) radical scavenging capacities increased to 7.89 and 7.36 μmol Trolox/g DM in the LB and ME treatments, respectively. Similarly, the ferric ion-reducing antioxidant power (FRAP) values increased to 10.50 and 9.30 μmol Trolox/g DM in the LB and ME treatments, respectively. Metabolomics analysis revealed 1449 secondary metabolites in WCS, with LB and ME promoting the synthesis of flavonoids, particularly sinapic acid, 1,2,5,7,8-pentahydroxy-3-methylanthracene-9,10-dione, and 2,4-dihydroxybenzoic acid. A positive correlation was observed between water-soluble carbohydrates, DPPH, FRAP, SOD, chrysoeriol, and kaempferide in LB-treated WCS. In conclusion, the LB treatment exhibited superior antioxidant activities, which ultimately promoted flavonoid synthesis. The findings of this study provide mechanistic insights into the influence of supplements on antioxidant pathways in WCS. The development of WCS additives also provides direction for the optimization of functional additive products.

Graphical Abstract

全粒玉米青贮在贮藏过程中容易变质。然而,适当添加可提高活性代谢物,从而保持青贮品质和饲用价值。本研究通过评价发酵品质、抗氧化指标和活性代谢物,比较布氏乳杆菌(LB)、植物源褪黑素(ME)及其组合(LB + ME)处理WCS的代谢反应。与对照(CK)处理(348.43 U/g FW)相比,LB处理的超氧化物歧化酶(SOD)活性显著提高(p < 0.05),达到536.78 U/g FW。同时,ME处理过氧化氢酶活性达到34.90 nmol/min/g FW,显著高于CK、LB和LB + ME处理(p < 0.05)。LB和ME处理对DPPH自由基的清除能力分别提高到7.89和7.36 μmol Trolox/g DM。LB和ME处理的铁离子还原抗氧化能力(FRAP)分别达到10.50和9.30 μmol Trolox/g DM。代谢组学分析显示,WCS中有1449种次生代谢产物,其中LB和ME促进了黄酮类化合物的合成,尤其是辛酸、1,2,5,7,8-五羟基-3-甲基蒽-9,10-二酮和2,4-二羟基苯甲酸。在lb处理的WCS中,水溶性碳水化合物、DPPH、FRAP、SOD、chrysoiol和山奈啶呈显著正相关。综上所述,LB处理具有较强的抗氧化活性,最终促进了黄酮类化合物的合成。本研究的发现为补充剂对WCS抗氧化途径的影响提供了机制见解。WCS添加剂的发展也为功能性添加剂产品的优化提供了方向。图形抽象
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引用次数: 0
Development of duplex PCR targeting RpmTEs and phcA genes for rapid and simultaneous detection of Ralstonia pseudosolanacearum in mulberry and other crops 以rpmte和phcA基因为靶点的双链PCR技术在桑树和其他作物中快速同时检测伪茄枯菌
IF 5.2 2区 农林科学 Q1 AGRICULTURE, MULTIDISCIPLINARY Pub Date : 2025-11-04 DOI: 10.1186/s40538-025-00857-0
Xueming Li, Ting Yuan, Rumei Li, Izhar Hyder Qazi, Jiping Liu

Bacterial wilt disease is an important bacterial soil-borne disease that poses a considerable threat to the sericulture and other crop industries. In China, mulberry bacterial wilt disease is caused by Ralstonia pseudosolanacearum Mori (RPM), while in other crops, this disease is caused by R. pseudosolanacearum. Establishing a rapid detection method for bacterial wilt disease in mulberry and other crops is highly relevant for controlling its spread and damages. In the present study, we targeted the RPM-specific transposase RpmTEs gene (GenBank accession number: SAMN37721522) and R. pseudosolanacearum virulence genes transcriptional regulator phcA gene (GenBank accession number: AL646052.1) for developing a specific duplex PCR (dPCR) assay. The dPCR assay primers were designed, and 198 strains of R. pseudosolanacearum from nine different hosts were used to optimize the reaction system and amplification program. In addition, the RPM-dPCR detection assay was established to test its specificity, sensitivity, and practicality. In terms of specificity, the results showed that the RPM-specific detection primers RpmTEs-1F/R had a 2.27% higher accuracy rate compared to the MG67-F/R primers reported in previous literature. While the primers phcA-1F/R had a 5% higher accuracy rate than the AU759f/AU760r primers reported in previous literature. RPM-dPCR showed a DNA detection sensitivity of 1 pg/µL (equivalent to 1 × 104 CFU/mL) at RpmTEs-1F/R:phcA-1F/R = 0.25:0.5, an annealing temperature of 63 ℃ and 30 cycles. It was found to be highly specific, as it wasn’t affected by non-target bacteria. The RPM detection rate for mulberry bacterial wilt samples (125) was 64.8%, while R. pseudosolanacearum detection rate for other crops’ samples (143) was 46.9%. Compared to traditional isolation method, RPM and R. pseudosolanacearum detection rates were 56.8% and 44.1%, respectively. Traditional isolation methods had a 2.8–8.0% lower detection rate than RPM-dPCR assay. The established RPM-dPCR assay is simple, specific, sensitive, and efficient, as it can be simultaneously used for the rapid detection of bacterial wilt in mulberry and other crops.

Graphical Abstract

细菌性枯萎病是一种重要的细菌性土传病害,对蚕桑和其他作物产业构成了相当大的威胁。在中国,桑树细菌性萎蔫病是由Ralstonia pseudosolanacearum Mori (RPM)引起的,而在其他作物中,该疾病是由r.s pseudosolanacearum引起的。建立桑树等农作物青枯病的快速检测方法,对控制其传播和危害具有重要意义。在本研究中,我们针对rpm特异性转座酶RpmTEs基因(GenBank登录号:SAMN37721522)和假番茄红霉毒力基因转录调控因子phcA基因(GenBank登录号:AL646052.1)建立了特异性双链PCR (dPCR)检测。设计dPCR检测引物,以9个不同寄主的198株假茄青霉为实验材料,对反应体系和扩增程序进行优化。建立RPM-dPCR检测方法,检验其特异性、敏感性和实用性。特异性方面,结果显示rpm特异性检测引物rpmes - 1f /R比文献报道的MG67-F/R引物准确率提高2.27%。而引物phcA-1F/R的准确率比文献中报道的AU759f/AU760r引物高5%。RPM-dPCR在rpmte - 1f /R:phcA-1F/R = 0.25:0.5,退火温度为63℃,循环30次时,DNA检测灵敏度为1 pg/µL(相当于1 × 104 CFU/mL)。人们发现它具有高度特异性,因为它不受非目标细菌的影响。桑树青枯病样品(125份)的RPM检出率为64.8%,其他作物青枯病样品(143份)的RPM检出率为46.9%。与传统分离方法相比,RPM和pseudosolanacearum的检出率分别为56.8%和44.1%。传统分离方法的检出率比RPM-dPCR低2.8 ~ 8.0%。所建立的RPM-dPCR检测方法简便、特异、灵敏、高效,可同时用于桑树及其他作物青枯病的快速检测。图形抽象
{"title":"Development of duplex PCR targeting RpmTEs and phcA genes for rapid and simultaneous detection of Ralstonia pseudosolanacearum in mulberry and other crops","authors":"Xueming Li,&nbsp;Ting Yuan,&nbsp;Rumei Li,&nbsp;Izhar Hyder Qazi,&nbsp;Jiping Liu","doi":"10.1186/s40538-025-00857-0","DOIUrl":"10.1186/s40538-025-00857-0","url":null,"abstract":"<div><p>Bacterial wilt disease is an important bacterial soil-borne disease that poses a considerable threat to the sericulture and other crop industries. In China, mulberry bacterial wilt disease is caused by <i>Ralstonia pseudosolanacearum</i> Mori (RPM), while in other crops, this disease is caused by <i>R. pseudosolanacearum</i>. Establishing a rapid detection method for bacterial wilt disease in mulberry and other crops is highly relevant for controlling its spread and damages. In the present study, we targeted the RPM-specific transposase <i>RpmTEs</i> gene (GenBank accession number: SAMN37721522) and <i>R. pseudosolanacearum</i> virulence genes transcriptional regulator <i>phcA</i> gene (GenBank accession number: AL646052.1) for developing a specific duplex PCR (dPCR) assay. The dPCR assay primers were designed, and 198 strains of <i>R. pseudosolanacearum</i> from nine different hosts were used to optimize the reaction system and amplification program. In addition, the RPM-dPCR detection assay was established to test its specificity, sensitivity, and practicality. In terms of specificity, the results showed that the RPM-specific detection primers RpmTEs-1F/R had a 2.27% higher accuracy rate compared to the MG67-F/R primers reported in previous literature. While the primers phcA-1F/R had a 5% higher accuracy rate than the AU759f/AU760r primers reported in previous literature. RPM-dPCR showed a DNA detection sensitivity of 1 pg/µL (equivalent to 1 × 10<sup>4</sup> CFU/mL) at RpmTEs-1F/R:phcA-1F/R = 0.25:0.5, an annealing temperature of 63 ℃ and 30 cycles. It was found to be highly specific, as it wasn’t affected by non-target bacteria. The RPM detection rate for mulberry bacterial wilt samples (125) was 64.8%, while <i>R. pseudosolanacearum</i> detection rate for other crops’ samples (143) was 46.9%. Compared to traditional isolation method, RPM and <i>R. pseudosolanacearum</i> detection rates were 56.8% and 44.1%, respectively. Traditional isolation methods had a 2.8–8.0% lower detection rate than RPM-dPCR assay. The established RPM-dPCR assay is simple, specific, sensitive, and efficient, as it can be simultaneously used for the rapid detection of bacterial wilt in mulberry and other crops.</p><h3>Graphical Abstract</h3>\u0000<div><figure><div><div><picture><source><img></source></picture></div></div></figure></div></div>","PeriodicalId":512,"journal":{"name":"Chemical and Biological Technologies in Agriculture","volume":"12 1","pages":""},"PeriodicalIF":5.2,"publicationDate":"2025-11-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://chembioagro.springeropen.com/counter/pdf/10.1186/s40538-025-00857-0","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145456410","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Pentamycin derived from Streptomyces murinus TCS22-109 as a promising biocontrol agent against postharvest gray mold and soft rot 从鼠链霉菌TCS22-109中提取的戊霉素是一种很有前途的防治采后灰霉病和软腐病的生物制剂
IF 5.2 2区 农林科学 Q1 AGRICULTURE, MULTIDISCIPLINARY Pub Date : 2025-10-31 DOI: 10.1186/s40538-025-00877-w
Jing Duan, Xuan Hu, Shaoyong Zhang, Jidong Wang, Fei Chen, Ezzeldin Ibrahim, Dan Wang, Haiping Lin

The majority of plant diseases are caused by pathogenic fungi, leading to huge losses in agriculture and forestry. Recently, the isolation and identification of antifungal compounds from actinomycetes have emerged as effective strategies for developing novel biological fungicides. In this study, the antagonistic strain TCS22-109 demonstrated broad-spectrum antifungal activity against six common pathogenic fungi and was identified as Streptomyces murinus based on morphological, physiological, and biochemical characteristics, as well as phylogenetic analysis of the 16S rRNA gene sequence. To tap into the bioactive potential of actinomycetes, an antifungal activity-guided isolation was performed on the fermentation extracts of strain TCS22-109. As a result, two antifungal compounds, actinomycin D and pentamycin, were isolated from TCS22-109, and their chemical structures were elucidated using NMR (nuclear magnetic resonance spectroscopy) and HR-MS (high-resolution mass spectrometry) analysis. Among these, pentamycin exhibited notable broad-spectrum antifungal properties, particularly against Rhizoctonia solani and Botrytis cinerea. Scanning electron microscopy (SEM) revealed that pentamycin inhibited the mycelial growth of B. cinerea and induced sporulation. Additionally, treatment with pentamycin led to ergosterol depletion and enhanced intracellular leakage in B. cinerea mycelium, indicating damage to cell membranes. Furthermore, pentamycin effectively protected postharvest fruit from gray mold caused by B. cinerea. These findings suggest that pentamycin derived from S. murinus TCS22-109 holds promise as a natural fungicide for managing plant and postharvest fruit diseases.

Graphical Abstract

大多数植物病害是由病原真菌引起的,给农业和林业造成巨大损失。近年来,从放线菌中分离和鉴定抗真菌化合物已成为开发新型生物杀菌剂的有效策略。在本研究中,拮抗菌株TCS22-109对6种常见病原菌表现出广谱的抗真菌活性,根据形态学、生理生化特征以及16S rRNA基因序列的系统发育分析,鉴定为鼠链霉菌。为了挖掘放线菌的生物活性潜力,对菌株TCS22-109的发酵提取物进行了抗真菌活性引导分离。结果,从TCS22-109中分离得到两个抗真菌化合物放线菌素D和pentamycin,并利用核磁共振波谱(NMR)和高分辨率质谱(HR-MS)分析对其化学结构进行了鉴定。其中,戊霉素表现出显著的广谱抗真菌特性,特别是对茄枯丝核菌和灰霉病菌。扫描电镜(SEM)结果显示,戊霉素抑制了葡萄球菌菌丝的生长并诱导产孢。此外,戊霉素治疗导致麦角甾醇耗竭,增强了葡萄球菌菌丝体的细胞内渗漏,表明细胞膜受损。此外,戊霉素还能有效地保护采后果实免受灰霉病的侵袭。这些发现表明,从S. murinus TCS22-109中提取的戊霉素有望作为一种天然杀菌剂用于控制植物和采后果实病害。图形抽象
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引用次数: 0
Effects of yucca extract on dynamic nutrient change, greenhouse gas emissions, and microbial community during chicken manure storage 丝兰提取物对鸡粪贮存过程中养分动态变化、温室气体排放和微生物群落的影响
IF 5.2 2区 农林科学 Q1 AGRICULTURE, MULTIDISCIPLINARY Pub Date : 2025-10-29 DOI: 10.1186/s40538-025-00874-z
Zhipeng Wu, Simin Liu, Yaqi Li, Siyu Fan, Shuaixin Tian, Guoyan Zhang, Yichun Liu, Hongliang Wang

Liquid manure storage contributes substantially to environmental emissions within manure management systems. This study evaluated Yucca schidigera extract (YE) as a sustainable microbial modulator for mitigating ammonia (NH3) and greenhouse gas emissions during 60-day storage of liquid chicken manure. Three treatments were established: no additive (control, CK), 0.1% biological deodorant (positive control, BF), and 0.5% YE. The results demonstrated that both YE and BF significantly reduced electrical conductivity (EC) (YE: 38.35%; BF: 34.51%) and ammonium nitrogen (NH4⁺-N) content (YE: 14.15%; BF: 20.21%) relative to CK, while elevating the C/N ratio by 9.97% (YE) and 18.63% (BF). Total nitrogen decreased by 23.88% (YE) and 26.34% (BF) from initial levels. In addition, the cumulative NH3 emissions of YE and BF decreased significantly by 20.18% and 20.12% compared to CK. However, YE increased CH₄ emissions by 17.43%, elevating global warming potential, whereas BF exhibited no significant effect on CH4. Neither additive influenced CO2 or N2O emissions. Microbial analysis revealed YE enriched Firmicutes (e.g., Fermentimonas), while BF enhanced Actinobacteriota (e.g., Corynebacterium) and Proteobacteria. Both additives suppressed ammonia-producing bacteria (e.g., Proteiniphilum). Mantel tests analysis indicated NH3 emissions correlated positively with EC and NH4⁺-N (P < 0.01), while CH4 emissions correlated with organic matter (OM) content (P < 0.05). These findings elucidate the microbial mechanisms of YE in mitigating the NH3 emission during liquid manure storage, whereas YE may induce trade-offs in CH4 emission. In the future, the formulation of compound plant-derived additives will be necessary for the synergetic abatement of carbon and nitrogen gases.

Graphical Abstract

液体粪肥储存对粪肥管理系统中的环境排放有很大贡献。本研究评价了丝兰提取物(Yucca schidigera extract, YE)作为一种可持续性微生物调节剂,在液态鸡粪贮存60 d期间减少氨(NH3)和温室气体的排放。建立了3个处理:无添加剂(对照,CK)、0.1%生物除臭剂(阳性对照,BF)和0.5% YE。结果表明,与CK相比,YE和BF均显著降低了电导率(EC) (YE: 38.35%, BF: 34.51%)和铵态氮(NH4 + -N)含量(YE: 14.15%, BF: 20.21%), C/N比分别提高了9.97% (YE)和18.63% (BF)。总氮比初始水平分别下降23.88% (YE)和26.34% (BF)。此外,与对照相比,YE和BF的累积NH3排放量显著下降20.18%和20.12%。然而,YE增加了17.43%的CH4排放量,提高了全球变暖潜势,而BF对CH4没有显著影响。两种添加剂都不影响CO2或N2O的排放。微生物分析显示,YE富集了厚壁菌门(如发酵单胞菌),而BF增强了放线菌门(如棒状杆菌)和变形菌门。两种添加剂都抑制产氨细菌(如嗜蛋白菌)。Mantel测试分析表明,NH3排放量与EC、NH4 + -N呈正相关(P < 0.01), CH4排放量与有机质(OM)含量呈正相关(P < 0.05)。这些发现阐明了YE在减少液肥储存过程中NH3排放的微生物机制,而YE可能导致CH4排放的权衡。在未来,复合植物衍生添加剂的配方将是必要的,以协同减排的碳和氮气体。图形抽象
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引用次数: 0
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Chemical and Biological Technologies in Agriculture
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