Pub Date : 2025-11-28DOI: 10.1186/s40538-025-00883-y
Muhammad Naveed, Iqra Abid, Muhammad Munir, Abdul Ghafoor, Nashi Alqahtani, Sabreena Islam, Hassan Ali-Dinar, Adnan Mustafa
Cadmium (Cd) contamination in agricultural soils poses a significant threat to sustainable food production, necessitating innovative remediation strategies. This study introduces knowledge-based augmented manure (AM), formulated through controlled microbial oxidation of sulfur to generate H+ ions for targeted soil acidification, optimizing phosphate (P)-mediated Cd immobilization. A greenhouse experiment was conducted using B. napus in non-spiked and Cd-spiked alkaline soils (0 and 60 mg kg−1 Cd), with two P fertilizer rates (0.5% and 1% DAP) applied in combination with either normal manure (NM) or AM. The amendment rates (P40 and P80) were determined based on an incubation trial to achieve specific soil pH targets (7.5 and 6.5) while preventing over-acidification. Results showed that Cd stress severely impaired plant growth and triggered antioxidant enzyme activity. However, AM + P80 significantly improved plant physiological and agronomic traits, leading to a 90.9% reduction in Cd bioaccumulation, an 83% decrease in the Cd bioconcentration factor, and a 78.8% decline in the Cd harvest index. Additionally, the AM + P80 treatment reduced the health risk index by 83.2%, demonstrating its potential to enhance soil health, suppress Cd uptake, and safeguard food safety. These findings highlight AM as a promising, precision-based soil amendment that regulates pH, optimizes P-Cd interactions, and improves plant resilience in Cd-contaminated calcareous soils.
{"title":"Precision-based augmented manure for pH-targeted soil acidification: improved phosphate-mediated cadmium immobilization and canola growth in calcareous soils","authors":"Muhammad Naveed, Iqra Abid, Muhammad Munir, Abdul Ghafoor, Nashi Alqahtani, Sabreena Islam, Hassan Ali-Dinar, Adnan Mustafa","doi":"10.1186/s40538-025-00883-y","DOIUrl":"10.1186/s40538-025-00883-y","url":null,"abstract":"<div><p>Cadmium (Cd) contamination in agricultural soils poses a significant threat to sustainable food production, necessitating innovative remediation strategies. This study introduces knowledge-based augmented manure (AM), formulated through controlled microbial oxidation of sulfur to generate H<sup>+</sup> ions for targeted soil acidification, optimizing phosphate (P)-mediated Cd immobilization. A greenhouse experiment was conducted using <i>B. napus</i> in non-spiked and Cd-spiked alkaline soils (0 and 60 mg kg<sup>−1</sup> Cd), with two P fertilizer rates (0.5% and 1% DAP) applied in combination with either normal manure (NM) or AM. The amendment rates (P40 and P80) were determined based on an incubation trial to achieve specific soil pH targets (7.5 and 6.5) while preventing over-acidification. Results showed that Cd stress severely impaired plant growth and triggered antioxidant enzyme activity. However, AM + P80 significantly improved plant physiological and agronomic traits, leading to a 90.9% reduction in Cd bioaccumulation, an 83% decrease in the Cd bioconcentration factor, and a 78.8% decline in the Cd harvest index. Additionally, the AM + P80 treatment reduced the health risk index by 83.2%, demonstrating its potential to enhance soil health, suppress Cd uptake, and safeguard food safety. These findings highlight AM as a promising, precision-based soil amendment that regulates pH, optimizes P-Cd interactions, and improves plant resilience in Cd-contaminated calcareous soils.</p><h3>Graphical Abstract</h3><div><figure><div><div><picture><source><img></source></picture></div></div></figure></div></div>","PeriodicalId":512,"journal":{"name":"Chemical and Biological Technologies in Agriculture","volume":"12 1","pages":""},"PeriodicalIF":5.2,"publicationDate":"2025-11-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://link.springer.com/content/pdf/10.1186/s40538-025-00883-y.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145779205","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-11-27DOI: 10.1186/s40538-025-00893-w
Yanwei Gong, Junying Zhang, Liu Yang, Xinyi Zhao, Lingdie Wang, Dong An, Lianqiang Jiang, Yubing Jiao, Lili Shen
Background
Plant viruses cause severe agricultural losses. Conventional pesticides have issues such as residues and resistance, while the delivery efficiency of functional microRNAs in RNA interference strategies is low. This study aimed to evaluate the inhibitory effect of miR168d on potato virus Y in Nicotiana benthamiana and construct a high-efficiency nanodelivery system.
Results
MicroRNA168d significantly reduces the replication and spread of potato virus Y by targeting and inhibiting Heat Shock Protein 90-5. For the nanocomplex with a tetrahedral DNA nanostructure as the carrier and the cationic lipid 1,2-dioleoyl-3-trimethylammonium propane (DOTAP) as the coating—characterization showed that it enhances the vascular transport efficiency, nuclease resistance, and cellular permeability of miR168d. Additionally, this nanocomplex exhibits low toxicity and good biocompatibility toward tobacco suspension cells. After foliar application, the nanocomplex group showed higher accumulation of miR168d in the leaves and stems of N. benthamiana compared with that in the control group. Specifically, the accumulation of mRNA and protein of the PVY coat protein in the nanocomplex group decreased by 64.3% and the corresponding percentage (consistent with the reduction at the protein level), respectively. As a result, the disease resistance of the plants was significantly improved.
Conclusion
This study reveals the antiviral mechanism of the miR168d-HSP90-5 regulatory module, provides a green non-transgenic nanoscale strategy, and is of great significance for agricultural antiviral breeding and sustainable agriculture.
{"title":"DOTAP-functionalized DNA nanocages enable efficient miR168d trafficking to antagonize PVY infection by modulating HSP90-5 homeostasis","authors":"Yanwei Gong, Junying Zhang, Liu Yang, Xinyi Zhao, Lingdie Wang, Dong An, Lianqiang Jiang, Yubing Jiao, Lili Shen","doi":"10.1186/s40538-025-00893-w","DOIUrl":"10.1186/s40538-025-00893-w","url":null,"abstract":"<div><h3>Background</h3><p>Plant viruses cause severe agricultural losses. Conventional pesticides have issues such as residues and resistance, while the delivery efficiency of functional microRNAs in RNA interference strategies is low. This study aimed to evaluate the inhibitory effect of miR168d on potato virus Y in <i>Nicotiana benthamiana</i> and construct a high-efficiency nanodelivery system.</p><h3>Results</h3><p>MicroRNA168d significantly reduces the replication and spread of potato virus Y by targeting and inhibiting Heat Shock Protein 90-5. For the nanocomplex with a tetrahedral DNA nanostructure as the carrier and the cationic lipid 1,2-dioleoyl-3-trimethylammonium propane (DOTAP) as the coating—characterization showed that it enhances the vascular transport efficiency, nuclease resistance, and cellular permeability of miR168d. Additionally, this nanocomplex exhibits low toxicity and good biocompatibility toward tobacco suspension cells. After foliar application, the nanocomplex group showed higher accumulation of miR168d in the leaves and stems of <i>N. benthamiana</i> compared with that in the control group. Specifically, the accumulation of mRNA and protein of the PVY coat protein in the nanocomplex group decreased by 64.3% and the corresponding percentage (consistent with the reduction at the protein level), respectively. As a result, the disease resistance of the plants was significantly improved.</p><h3>Conclusion</h3><p>This study reveals the antiviral mechanism of the miR168d-HSP90-5 regulatory module, provides a green non-transgenic nanoscale strategy, and is of great significance for agricultural antiviral breeding and sustainable agriculture.</p><h3>Graphical abstract</h3><div><figure><div><div><picture><source><img></source></picture></div></div></figure></div></div>","PeriodicalId":512,"journal":{"name":"Chemical and Biological Technologies in Agriculture","volume":"12 1","pages":""},"PeriodicalIF":5.2,"publicationDate":"2025-11-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://link.springer.com/content/pdf/10.1186/s40538-025-00893-w.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145887040","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-11-26DOI: 10.1186/s40538-025-00887-8
Kangwei Xie, Yusha Du, Xiujuan Gan, Jiatong Zhang, Xinling Liu, Tieyi Hu, Jian Liang, Niqi Xie, Xingyong Yang
Background
Gray mold, a highly destructive disease that affects economically significant crops such as tomatoes, has been a subject of considerable research. Biological control via microorganisms is considered safe, effective, and environmentally friendly. Therefore, screening for biocontrol agents against Botrytis cinerea and elucidating their antagonistic mechanisms are essential for the biological management of tomato gray mold.
Results
In this study, Burkholderia plantarii BpMS90, which exhibited a 63.51% inhibition rate against B. cinerea and broad-spectrum antifungal activity against 10 plant pathogenic fungi, was isolated from the roots of Potentilla kleiniana. Biochemical, morphological, and genomic analyses classified BpMS90 as a strain of B. plantarii. Microscopic examination revealed that BpMS90 inhibited B. cinerea hyphae growth and markedly suppressed B. cinerea spore germination. Needle inoculation assays revealed that BpMS90 mitigates tomato fruit gray mold disease symptoms. Transcriptomic analysis and quantitative reverse transcription polymerase chain reaction demonstrated that BpMS90 induces the upregulation of disease resistance-associated genes, such as RPM1, RPS2, and PIK1 within the Avr-mediated defense pathway.
Conclusions
BpMS90 reduces the relative abundance of B. cinerea in postharvest tomato fruit and mitigates rot diseases caused by this fungus during storage by inducing the upregulation of genes involved in Avr-mediated defense pathways. This study is the first to reveal the biocontrol potential of BpMS90, thereby laying a foundation for B. cinerea control strategies and offering valuable insights into the postharvest biological control of fruits.
{"title":"Endophytic Burkholderia plantarii BpMS90 protects harvested tomato against gray mold via antagonistic action and disease resistance induction","authors":"Kangwei Xie, Yusha Du, Xiujuan Gan, Jiatong Zhang, Xinling Liu, Tieyi Hu, Jian Liang, Niqi Xie, Xingyong Yang","doi":"10.1186/s40538-025-00887-8","DOIUrl":"10.1186/s40538-025-00887-8","url":null,"abstract":"<div><h3>Background</h3><p>Gray mold, a highly destructive disease that affects economically significant crops such as tomatoes, has been a subject of considerable research. Biological control via microorganisms is considered safe, effective, and environmentally friendly. Therefore, screening for biocontrol agents against <i>Botrytis cinerea</i> and elucidating their antagonistic mechanisms are essential for the biological management of tomato gray mold.</p><h3>Results</h3><p>In this study, <i>Burkholderia plantarii</i> BpMS90, which exhibited a 63.51% inhibition rate against <i>B. cinerea</i> and broad-spectrum antifungal activity against 10 plant pathogenic fungi, was isolated from the roots of <i>Potentilla kleiniana</i>. Biochemical, morphological, and genomic analyses classified BpMS90 as a strain of <i>B. plantarii</i>. Microscopic examination revealed that BpMS90 inhibited <i>B. cinerea</i> hyphae growth and markedly suppressed <i>B. cinerea</i> spore germination. Needle inoculation assays revealed that BpMS90 mitigates tomato fruit gray mold disease symptoms. Transcriptomic analysis and quantitative reverse transcription polymerase chain reaction demonstrated that BpMS90 induces the upregulation of disease resistance-associated genes, such as <i>RPM1</i>, <i>RPS2</i>, and <i>PIK1</i> within the Avr-mediated defense pathway.</p><h3>Conclusions</h3><p>BpMS90 reduces the relative abundance of <i>B. cinerea</i> in postharvest tomato fruit and mitigates rot diseases caused by this fungus during storage by inducing the upregulation of genes involved in Avr-mediated defense pathways. This study is the first to reveal the biocontrol potential of BpMS90, thereby laying a foundation for <i>B. cinerea</i> control strategies and offering valuable insights into the postharvest biological control of fruits.</p><h3>Graphical Abstract</h3><div><figure><div><div><picture><source><img></source></picture></div></div></figure></div></div>","PeriodicalId":512,"journal":{"name":"Chemical and Biological Technologies in Agriculture","volume":"12 1","pages":""},"PeriodicalIF":5.2,"publicationDate":"2025-11-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://link.springer.com/content/pdf/10.1186/s40538-025-00887-8.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145612935","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-11-23DOI: 10.1186/s40538-025-00889-6
Amr Elkelish, Ahmad M. Alqudah, Sulaiman A. Alsalamah, Hussain Alqahtani, Haifa A. S. Alhaithloul, Amr Fouda, Celestin Ukozehasi, Samar G. Thabet
<div><h3>Background</h3><p>Combined drought–heat episodes are rising in frequency and severity. Beyond short-term acclimation, it remains unclear how plants archive these experiences across generations to influence offspring phenotype, a gap we address by interrogating transgenerational stress memory. These concurrent stresses trigger complex physiological and molecular responses and may establish a heritable stress memory in plants, potentially priming progeny for improved tolerance. To investigate this phenomenon, we explored the genetic architecture of transgenerational drought and heat stress memory in wheat through genome-wide association studies (GWAS) and candidate gene analysis. Our goal was to identify genetic loci and mechanisms that underlie adaptive responses to recurring abiotic stress.</p><h3>Methods</h3><p>A diverse panel of wheat genotypes was evaluated under well-watered control conditions and recurring combined drought–heat stress treatments across three successive generations. We measured key physiological parameters (e.g., chlorophyll content, osmolyte and protein levels) and agronomic traits (plant height, spike characteristics, grain number, kernel weight) to assess stress tolerance and memory retention. Genome-wide association mapping linked this phenotypic variation under stress to specific genomic regions, and candidate genes within these regions were identified based on known roles in abiotic stress responses. Expression profiling of selected candidate genes was also performed to validate their stress-responsive behavior.</p><h3>Results</h3><p>Recurrent drought and heat stress caused a progressive decline in chlorophyll content, accompanied by marked accumulation of stress-related metabolites such as proline and soluble proteins, reflecting adaptive physiological adjustment. In contrast, key yield components, including plant height, spike length, spikelet number, grains per spike, and thousand-kernel weight, were significantly reduced, underscoring the detrimental impact on productivity. These effects varied across generations and genotypes, indicating differences in stress memory and highlighting the need to select resilient lines. GWAS identified significant single-nucleotide polymorphisms (SNPs) in four genomic regions on chromosomes 1A, 1B, and 2A that are associated with chlorophyll content, osmolyte accumulation, and yield-related traits under repeated stress. Candidate genes in these loci include factors involved in RNA splicing (arginine/serine-rich splicing factors), carbohydrate metabolism (trehalose-6-phosphate phosphatase), cytoskeletal organization (actin bundling proteins), and cell wall modification (xyloglucan endotransglucosylase). Expression analyses showed that these genes are rapidly induced under combined stress, suggesting a coordinated regulatory network for stress adaptation. Notably, some identified loci were specifically linked to traits reflecting transgenerational memory, supporting a genetic
{"title":"Enhancing wheat resilience to combined drought and heat stress through genetic mapping of transgenerational stress memory","authors":"Amr Elkelish, Ahmad M. Alqudah, Sulaiman A. Alsalamah, Hussain Alqahtani, Haifa A. S. Alhaithloul, Amr Fouda, Celestin Ukozehasi, Samar G. Thabet","doi":"10.1186/s40538-025-00889-6","DOIUrl":"10.1186/s40538-025-00889-6","url":null,"abstract":"<div><h3>Background</h3><p>Combined drought–heat episodes are rising in frequency and severity. Beyond short-term acclimation, it remains unclear how plants archive these experiences across generations to influence offspring phenotype, a gap we address by interrogating transgenerational stress memory. These concurrent stresses trigger complex physiological and molecular responses and may establish a heritable stress memory in plants, potentially priming progeny for improved tolerance. To investigate this phenomenon, we explored the genetic architecture of transgenerational drought and heat stress memory in wheat through genome-wide association studies (GWAS) and candidate gene analysis. Our goal was to identify genetic loci and mechanisms that underlie adaptive responses to recurring abiotic stress.</p><h3>Methods</h3><p>A diverse panel of wheat genotypes was evaluated under well-watered control conditions and recurring combined drought–heat stress treatments across three successive generations. We measured key physiological parameters (e.g., chlorophyll content, osmolyte and protein levels) and agronomic traits (plant height, spike characteristics, grain number, kernel weight) to assess stress tolerance and memory retention. Genome-wide association mapping linked this phenotypic variation under stress to specific genomic regions, and candidate genes within these regions were identified based on known roles in abiotic stress responses. Expression profiling of selected candidate genes was also performed to validate their stress-responsive behavior.</p><h3>Results</h3><p>Recurrent drought and heat stress caused a progressive decline in chlorophyll content, accompanied by marked accumulation of stress-related metabolites such as proline and soluble proteins, reflecting adaptive physiological adjustment. In contrast, key yield components, including plant height, spike length, spikelet number, grains per spike, and thousand-kernel weight, were significantly reduced, underscoring the detrimental impact on productivity. These effects varied across generations and genotypes, indicating differences in stress memory and highlighting the need to select resilient lines. GWAS identified significant single-nucleotide polymorphisms (SNPs) in four genomic regions on chromosomes 1A, 1B, and 2A that are associated with chlorophyll content, osmolyte accumulation, and yield-related traits under repeated stress. Candidate genes in these loci include factors involved in RNA splicing (arginine/serine-rich splicing factors), carbohydrate metabolism (trehalose-6-phosphate phosphatase), cytoskeletal organization (actin bundling proteins), and cell wall modification (xyloglucan endotransglucosylase). Expression analyses showed that these genes are rapidly induced under combined stress, suggesting a coordinated regulatory network for stress adaptation. Notably, some identified loci were specifically linked to traits reflecting transgenerational memory, supporting a genetic ","PeriodicalId":512,"journal":{"name":"Chemical and Biological Technologies in Agriculture","volume":"12 1","pages":""},"PeriodicalIF":5.2,"publicationDate":"2025-11-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://link.springer.com/content/pdf/10.1186/s40538-025-00889-6.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145675699","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-11-21DOI: 10.1186/s40538-025-00888-7
Ali Salehzadeh, Mohammad Hossein Mirjalili, Mansoureh Tavan, Ali Sonboli, Shahrokh Kazempour-Osaloo, Samad Nejad Ebrahimi
Background
Astragalus L. (Fabaceae), a genus rich in bioactive triterpene saponins like astragalosides (ASTs), is recognized for its diverse biological activities. The present study aimed to quantify ASTs I, II, and IV in root extracts of fifteen Iranian Astragalus species. The acetylcholinesterase inhibitory activity of root extracts from astragaloside-rich species was also evaluated, and their neuroprotective effects were estimated using molecular docking analysis. Additionally, total phenolic content (TPC), total flavonoid content (TFC), and antioxidant activity in root and aerial parts of species were evaluated.
Results
A. michauxianus and A. gossypinus yielded the highest ASTs I and IV content (2.49 ± 0.03 and 6.27 ± 0.89 mg/g DW, respectively), among Astragalus species examined in this study. TPC and TFC of roots were higher than that of aerial parts for all species, and the highest TPC and TFC were obtained for A. verus (12.12 ± 1.05 mg GAE/g DW) and A. floccosus (115.48 ± 1.54 mg RUE /g DW), respectively. Furthermore, the aerial parts extracts of A. remotijugus and A. aduncus showed the best free radical scavenging ability with the lowest IC50 values (28.83 ± 0.64 and 28.86 ± 0.64 μg/mL, respectively), while for A. gossypinus and A. floccosus, the best scavenging ability (IC50) was displayed in root extracts (23.32 ± 0.79 and 23.45 ± 0.74 μg/mL, respectively). The highest AChE inhibitory activity was exhibited by A. aduncus with the lowest IC50 (200 ± 14.02 µg/ mL), followed by A. gossypinus and A. michauxianus. Moreover, molecular docking studies revealed that astragaloside I exhibits the strongest binding affinity to AChE (− 7.610 kcal/mol), forming multiple stabilizing interactions within the active site, suggesting its superior inhibitory potential compared to astragalosides II and IV.
Conclusions
These findings highlight the potential of selected Astragalus species as valuable resources for pharmaceutical applications and provide a foundation for future breeding programs aimed at maximizing ASTs production.
{"title":"Phytochemical profiling and acetylcholinesterase inhibitory activity of fifteen Iranian Astragalus species: towards new sources of astragalosides","authors":"Ali Salehzadeh, Mohammad Hossein Mirjalili, Mansoureh Tavan, Ali Sonboli, Shahrokh Kazempour-Osaloo, Samad Nejad Ebrahimi","doi":"10.1186/s40538-025-00888-7","DOIUrl":"10.1186/s40538-025-00888-7","url":null,"abstract":"<div><h3>Background</h3><p><i>Astragalus</i> L. (Fabaceae), a genus rich in bioactive triterpene saponins like astragalosides (ASTs), is recognized for its diverse biological activities. The present study aimed to quantify ASTs I, II, and IV in root extracts of fifteen Iranian <i>Astragalus</i> species. The acetylcholinesterase inhibitory activity of root extracts from astragaloside-rich species was also evaluated, and their neuroprotective effects were estimated using molecular docking analysis. Additionally, total phenolic content (TPC), total flavonoid content (TFC), and antioxidant activity in root and aerial parts of species were evaluated.</p><h3>Results</h3><p><i>A. michauxianus</i> and <i>A. gossypinus</i> yielded the highest ASTs I and IV content (2.49 ± 0.03 and 6.27 ± 0.89 mg/g DW, respectively), among <i>Astragalus</i> species examined in this study. TPC and TFC of roots were higher than that of aerial parts for all species, and the highest TPC and TFC were obtained for <i>A. verus</i> (12.12 ± 1.05 mg GAE/g DW) and <i>A. floccosus</i> (115.48 ± 1.54 mg RUE /g DW), respectively. Furthermore, the aerial parts extracts of <i>A. remotijugus</i> and <i>A. aduncus</i> showed the best free radical scavenging ability with the lowest IC<sub>50</sub> values (28.83 ± 0.64 and 28.86 ± 0.64 μg/mL, respectively), while for <i>A. gossypinus</i> and <i>A. floccosus</i>, the best scavenging ability (IC<sub>50</sub>) was displayed in root extracts (23.32 ± 0.79 and 23.45 ± 0.74 μg/mL, respectively). The highest AChE inhibitory activity was exhibited by <i>A. aduncus</i> with the lowest IC<sub>50</sub> (200 ± 14.02 µg/ mL), followed by <i>A. gossypinus</i> and <i>A. michauxianus</i>. Moreover, molecular docking studies revealed that astragaloside I exhibits the strongest binding affinity to AChE (− 7.610 kcal/mol), forming multiple stabilizing interactions within the active site, suggesting its superior inhibitory potential compared to astragalosides II and IV.</p><h3>Conclusions</h3><p>These findings highlight the potential of selected <i>Astragalus</i> species as valuable resources for pharmaceutical applications and provide a foundation for future breeding programs aimed at maximizing ASTs production.</p><h3>Graphical Abstract</h3><div><figure><div><div><picture><source><img></source></picture></div></div></figure></div></div>","PeriodicalId":512,"journal":{"name":"Chemical and Biological Technologies in Agriculture","volume":"12 1","pages":""},"PeriodicalIF":5.2,"publicationDate":"2025-11-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://chembioagro.springeropen.com/counter/pdf/10.1186/s40538-025-00888-7","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145561657","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Alfalfa (Medicago sativa L.) is one of the most important forage crop in northern China, suffers from low-temperature (LT) stress, which significantly impairs its yield. While selenium (Se) supplementation has been reported to enhance abiotic stress tolerance in plants, the underlying molecular mechanisms in alfalfa remain poorly understood. This study aims to explore how Se mediates LT tolerance in alfalfa through transcriptomic analysis.
Results
Selenium significantly increased total Se in both shoots and roots, enhanced root-to-shoot translocation, and under low temperature (LT) shifted Se speciation toward organic forms at the higher dose. Meanwhile, 0.4 mg kg−1 Se was sufficient to restore Pn, Gs, Ci, and Tr, reduce MDA, and elevate SOD, POD, APX, GR, GSH, and ASA, indicating improved photosynthetic performance and antioxidant status. Co-expression network analysis identified modules tightly associated with these traits: in the photosynthetic module, MS.gene064837 and MS.gene051360 were positively correlated with Gs, whereas MS.gene061853 and MS.gene037454 were positively correlated with Ci and Tr but negatively with Gs, suggesting coordination between carbon assimilation and stomatal control. In the antioxidant module, MS.gene036174 correlated positively with GSH and MDA and negatively with GSSG, while MS.gene064490 showed negative correlations with Pro, SS, GSSG, SOD, and POD. qRT-PCR of six targets corroborated the RNA-seq trends. Collectively, these results indicate that moderate soil Se (0.4 mg·kg−1) supplementation enhances LT tolerance in alfalfa by concurrently optimizing photosynthetic regulation and antioxidant defense, with MS.gene064837, MS.gene051360, MS.gene036174, and MS.gene064490 emerging as candidate regulators whose specific functions require further validation.
Conclusions
This study reveals that selenium enhances LT tolerance in alfalfa by promoting Se conversion into its organic form, optimizing redox homeostasis, and activating key genes associated with photosynthesis and antioxidant defense. These findings provide valuable insights into Se-mediated cold tolerance mechanisms, offering a foundation for Se-based strategies in improving the resilience of forage crops to cold stress.
{"title":"Transcriptomic insights into selenium‐mediated mitigation of low‐temperature stress in alfalfa","authors":"Runze Wang, Xiaoxu Qie, Muhammad Irfan Malik, Xinyao Li, Shengping Zhang, Xiaotian Zhang, Qunying Zhang, Jianbo Zhang, Cai Sun, Yajun Zhang, Yaling Lu, Qiang Ma, Yingkui Yang, Binqiang Bai, Lizhuang Hao","doi":"10.1186/s40538-025-00885-w","DOIUrl":"10.1186/s40538-025-00885-w","url":null,"abstract":"<div><h3>Background</h3><p>Alfalfa (<i>Medicago sativa L.</i>) is one of the most important forage crop in northern China, suffers from low-temperature (LT) stress, which significantly impairs its yield. While selenium (Se) supplementation has been reported to enhance abiotic stress tolerance in plants, the underlying molecular mechanisms in alfalfa remain poorly understood. This study aims to explore how Se mediates LT tolerance in alfalfa through transcriptomic analysis.</p><h3>Results</h3><p>Selenium significantly increased total Se in both shoots and roots, enhanced root-to-shoot translocation, and under low temperature (LT) shifted Se speciation toward organic forms at the higher dose. Meanwhile, 0.4 mg kg<sup>−1</sup> Se was sufficient to restore Pn, Gs, Ci, and Tr, reduce MDA, and elevate SOD, POD, APX, GR, GSH, and ASA, indicating improved photosynthetic performance and antioxidant status. Co-expression network analysis identified modules tightly associated with these traits: in the photosynthetic module, MS.gene064837 and MS.gene051360 were positively correlated with Gs, whereas MS.gene061853 and MS.gene037454 were positively correlated with Ci and Tr but negatively with Gs, suggesting coordination between carbon assimilation and stomatal control. In the antioxidant module, MS.gene036174 correlated positively with GSH and MDA and negatively with GSSG, while MS.gene064490 showed negative correlations with Pro, SS, GSSG, SOD, and POD. qRT-PCR of six targets corroborated the RNA-seq trends. Collectively, these results indicate that moderate soil Se (0.4 mg·kg<sup>−1</sup>) supplementation enhances LT tolerance in alfalfa by concurrently optimizing photosynthetic regulation and antioxidant defense, with MS.gene064837, MS.gene051360, MS.gene036174, and MS.gene064490 emerging as candidate regulators whose specific functions require further validation.</p><h3>Conclusions</h3><p>This study reveals that selenium enhances LT tolerance in alfalfa by promoting Se conversion into its organic form, optimizing redox homeostasis, and activating key genes associated with photosynthesis and antioxidant defense. These findings provide valuable insights into Se-mediated cold tolerance mechanisms, offering a foundation for Se-based strategies in improving the resilience of forage crops to cold stress.</p><h3>Graphical Abstract</h3><div><figure><div><div><picture><source><img></source></picture></div></div></figure></div></div>","PeriodicalId":512,"journal":{"name":"Chemical and Biological Technologies in Agriculture","volume":"12 1","pages":""},"PeriodicalIF":5.2,"publicationDate":"2025-11-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://chembioagro.springeropen.com/counter/pdf/10.1186/s40538-025-00885-w","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145561639","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
This study was based on the identification of drought-resistant wheat varieties from trials to assess drought levels accurately in wheat and respond promptly to the impact of drought stress on grain yield. Hyperspectral remote sensing data and canopy temperature parameters for different wheat varieties were obtained, and classification models for drought resistance were constructed using various machine learning algorithms.
Results
As the growth period progresses, the spectral reflectance in the near-infrared band first increases but then decreases in the following pattern: flowering > heading > booting > jointing > filling. The effective temperature range of the canopy temperature histogram for different drought-resistant varieties also gradually increased with growth stage, and during each growth stage, the temperature variation in strongly drought-resistant varieties was the smallest compared with that in extremely weak drought-resistant varieties. Vegetation indices can represent the differences in drought resistance among wheat varieties; under drought stress, as drought resistance decreases, the canopy temperature parameters increase. There are certain correlations between the vegetation index (VI), canopy temperature parameter (TP), and the drought index for wheat yield. Furthermore, among the classification models based on the VI, TP, and VI + TP, the random forest (RF) model has the highest accuracy rate. Among them, the accuracy rates of the random forest model for VI + TP are 89.47% for overall accuracy (OA) and 0.85 for Kappa, which are higher than those of VI (OA = 69.57%, Kappa = 0.57) and TP (OA = 76.19%, Kappa = 0.66). In the optimal classification model VI + TP-RF, TP contributes the most to the RF classification algorithm based on multisource data fusion.
Conclusions
This study confirms the feasibility of using multimodal data fusion for classifying drought-resistant wheat varieties and provides a new reference method for further clear evaluation of wheat drought grade.