Pub Date : 2025-10-13DOI: 10.1007/s11696-025-04419-4
Vaishali, Shubham Sharma, Swati Rani, Richa Singh, Bharti Budhalakoti, Saurabh Bhardwaj, Magdi E. A. Zaki, Sobhi M. Gomha
Greener synthetic approaches have become more significant in organic synthesis over the past decade. Green synthesis is widely accepted by organic and medicinal chemists to construct sustainable organic molecular frameworks. Due to their unusual properties, ionic liquids have received considerable attention to researchers. Quinolines are privileged scaffolds for identifying lead structures like linomide, ciprofloxacin, and hydroxychloroquine, which have considerable medicinal potential. Quinoline and its scaffolds are used in many scientific fields to create useful molecular architectures. Previous reports show that ionic liquids act as solvents, and catalysts are essential for nature-friendly quinoline derivative development. There is no systematic analysis of ionic liquids-assisted quinoline synthesis despite its advances and potential. This is the first comprehensive review that depicts the dual role of ionic liquids in creating more interesting quinoline derivatives.
{"title":"Dual role of ionic liquids in quinoline scaffolds syntheses: a green and sustainable perspective","authors":"Vaishali, Shubham Sharma, Swati Rani, Richa Singh, Bharti Budhalakoti, Saurabh Bhardwaj, Magdi E. A. Zaki, Sobhi M. Gomha","doi":"10.1007/s11696-025-04419-4","DOIUrl":"10.1007/s11696-025-04419-4","url":null,"abstract":"<div><p>Greener synthetic approaches have become more significant in organic synthesis over the past decade. Green synthesis is widely accepted by organic and medicinal chemists to construct sustainable organic molecular frameworks. Due to their unusual properties, ionic liquids have received considerable attention to researchers. Quinolines are privileged scaffolds for identifying lead structures like linomide, ciprofloxacin, and hydroxychloroquine, which have considerable medicinal potential. Quinoline and its scaffolds are used in many scientific fields to create useful molecular architectures. Previous reports show that ionic liquids act as solvents, and catalysts are essential for nature-friendly quinoline derivative development. There is no systematic analysis of ionic liquids-assisted quinoline synthesis despite its advances and potential. This is the first comprehensive review that depicts the dual role of ionic liquids in creating more interesting quinoline derivatives.</p><h3>Graphical abstract</h3><div><figure><div><div><picture><source><img></source></picture></div></div></figure></div></div>","PeriodicalId":513,"journal":{"name":"Chemical Papers","volume":"80 1","pages":"83 - 131"},"PeriodicalIF":2.5,"publicationDate":"2025-10-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147339434","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
This study presents a novel approach to drug discovery by integrating machine learning algorithms with molecular modeling techniques. Specifically, it focuses on quantitative structure property relationship (QSPR) analysis enhanced by eccentricity-based topological indices derived from molecular structures. The physicochemical properties of antidepressant drugs are predicted using a combination of linear regression, random forest, and XGBoost models. This interdisciplinary framework leverages the strengths of machine learning, computational chemistry, and topological analysis to accelerate and refine the drug design process. The integration of these methodologies not only reduces the time required to identify effective compounds, but also provides deeper insights into drug activity and optimization. The results indicate that this hybrid approach holds significant promise for advancing rational drug design and supporting the development of personalized therapeutic strategies within the pharmaceutical industry.
{"title":"A hybrid computational framework for antidepressant drug design integrating machine learning algorithms and molecular modeling","authors":"Wakeel Ahmed, Tamseela Ashraf, Shahid Zaman, Asad Ullah, Farhana Khalid","doi":"10.1007/s11696-025-04413-w","DOIUrl":"10.1007/s11696-025-04413-w","url":null,"abstract":"<div><p>This study presents a novel approach to drug discovery by integrating machine learning algorithms with molecular modeling techniques. Specifically, it focuses on quantitative structure property relationship (QSPR) analysis enhanced by eccentricity-based topological indices derived from molecular structures. The physicochemical properties of antidepressant drugs are predicted using a combination of linear regression, random forest, and XGBoost models. This interdisciplinary framework leverages the strengths of machine learning, computational chemistry, and topological analysis to accelerate and refine the drug design process. The integration of these methodologies not only reduces the time required to identify effective compounds, but also provides deeper insights into drug activity and optimization. The results indicate that this hybrid approach holds significant promise for advancing rational drug design and supporting the development of personalized therapeutic strategies within the pharmaceutical industry.</p></div>","PeriodicalId":513,"journal":{"name":"Chemical Papers","volume":"80 1","pages":"589 - 614"},"PeriodicalIF":2.5,"publicationDate":"2025-10-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://link.springer.com/content/pdf/10.1007/s11696-025-04413-w.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147339437","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
The flamboyant seed’s activated carbon (FSAC) was carefully studied as a promising adsorbent for removing 4-nitroaniline (4-NA) from an aqueous solution. The comparison between classical methods and response surface methodology (RSM) on operating conditions, including initial 4-NA concentration, pH level, adsorbent dose, and adsorption time, was conducted with great care and attention to detail. In the classical approach, the four operating parameters affected the adsorption capacity of FSAC, which increased with higher initial 4-NA concentrations and longer contact times. Adsorption was enhanced at low pH levels, with equilibrium reached at 120 min. In RSM, the amount of 4-NA adsorbed increased as concentrations rose, pH decreased, and adsorbent dosage was reduced. The quadratic model successfully described the relationship between adsorption and the operating parameters (R2 = 0.929). The optimal adsorption capacity of 40.4 mg/g was achieved at 300 mg/L 4-NA concentration, pH 2, 0.1 g of adsorbent, and an adsorption time of 362.5 min. The Freundlich isotherm and pseudo-second-order kinetic models best explain the adsorption process, confirming the thoroughness and reliability of this research.
{"title":"Comparative evaluation of classical and response surface methodologies approaches for 4-nitroaniline adsorption onto flamboyant seed carbon","authors":"Samsudeen Olanrewaju Azeez, Ismaila Olalekan Saheed, Akeem Adebayo Jimoh, Abdullahi Mohammed, Faiz Bukhari Mohd Suah","doi":"10.1007/s11696-025-04411-y","DOIUrl":"10.1007/s11696-025-04411-y","url":null,"abstract":"<div><p>The flamboyant seed’s activated carbon (FSAC) was carefully studied as a promising adsorbent for removing 4-nitroaniline (4-NA) from an aqueous solution. The comparison between classical methods and response surface methodology (RSM) on operating conditions, including initial 4-NA concentration, pH level, adsorbent dose, and adsorption time, was conducted with great care and attention to detail. In the classical approach, the four operating parameters affected the adsorption capacity of FSAC, which increased with higher initial 4-NA concentrations and longer contact times. Adsorption was enhanced at low pH levels, with equilibrium reached at 120 min. In RSM, the amount of 4-NA adsorbed increased as concentrations rose, pH decreased, and adsorbent dosage was reduced. The quadratic model successfully described the relationship between adsorption and the operating parameters (<i>R</i><sup>2</sup> = 0.929). The optimal adsorption capacity of 40.4 mg/g was achieved at 300 mg/L 4-NA concentration, pH 2, 0.1 g of adsorbent, and an adsorption time of 362.5 min. The Freundlich isotherm and pseudo-second-order kinetic models best explain the adsorption process, confirming the thoroughness and reliability of this research.</p></div>","PeriodicalId":513,"journal":{"name":"Chemical Papers","volume":"80 1","pages":"577 - 588"},"PeriodicalIF":2.5,"publicationDate":"2025-10-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147339436","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-10-13DOI: 10.1007/s11696-025-04415-8
Chinemerem Ruth Ohoro, James F. Amaku, Kabir O. Oyedotun, Kovo G. Akpomie, Emmanuel Sunday Okeke, Chijioke Olisah, Alhadji Malloum, Kayode Adesina Adegoke, Joshua O. Ighalo, Jeanet Conradie
Polychlorinated dibenzo-p-dioxins and dibenzofurans are highly toxic pollutants that persist in the environment, bioaccumulate, and pose serious risks to human health and ecosystems. Their widespread presence, linked to cancer, endocrine disruption, and immune system impairment, required the knowledge of their long-term effects and mitigation approaches, which has led to the investigation of their toxicities. This review provides an overview of research progress, challenges, state-of-the-art control technologies, and future perspectives in the field of toxicology. Toxicological studies emerged from Asia, Europe, and North America, with most studies from the USA. Epidemiological studies have linked exposure to PCDD/Fs with adverse health outcomes, such as cancer, developmental abnormalities, and immune system disorders. Various techniques have been developed among others to remediate PCDD/Fs, including electrokinetic treatment, thermal desorption, vitrification, and supercritical water for soil and sediment. Biological methods are frequently preferred because they are more economical and environmentally advantageous. Eliminating persistent organic pollutants pollution sources for soils as well as controlling, securing, and remediating polluted sites and reservoirs are urgently needed measures to limit exposure and ensure food safety. In terms of control technologies, significant progress has been made in the development of state-of-the-art approaches for mitigating PCDD/F contamination. The development of cheaper and faster analytical methods to accurately measure these compounds in environmental and biological matrices is encouraged.
{"title":"Toxicological implications of polychlorinated dibenzo-p-dioxins (PCDDs) and dibenzofurans (PCDFs) in human and environmental matrices in developing countries","authors":"Chinemerem Ruth Ohoro, James F. Amaku, Kabir O. Oyedotun, Kovo G. Akpomie, Emmanuel Sunday Okeke, Chijioke Olisah, Alhadji Malloum, Kayode Adesina Adegoke, Joshua O. Ighalo, Jeanet Conradie","doi":"10.1007/s11696-025-04415-8","DOIUrl":"10.1007/s11696-025-04415-8","url":null,"abstract":"<div><p>Polychlorinated dibenzo-p-dioxins and dibenzofurans are highly toxic pollutants that persist in the environment, bioaccumulate, and pose serious risks to human health and ecosystems. Their widespread presence, linked to cancer, endocrine disruption, and immune system impairment, required the knowledge of their long-term effects and mitigation approaches, which has led to the investigation of their toxicities. This review provides an overview of research progress, challenges, state-of-the-art control technologies, and future perspectives in the field of toxicology. Toxicological studies emerged from Asia, Europe, and North America, with most studies from the USA. Epidemiological studies have linked exposure to PCDD/Fs with adverse health outcomes, such as cancer, developmental abnormalities, and immune system disorders. Various techniques have been developed among others to remediate PCDD/Fs, including electrokinetic treatment, thermal desorption, vitrification, and supercritical water for soil and sediment. Biological methods are frequently preferred because they are more economical and environmentally advantageous. Eliminating persistent organic pollutants pollution sources for soils as well as controlling, securing, and remediating polluted sites and reservoirs are urgently needed measures to limit exposure and ensure food safety. In terms of control technologies, significant progress has been made in the development of state-of-the-art approaches for mitigating PCDD/F contamination. The development of cheaper and faster analytical methods to accurately measure these compounds in environmental and biological matrices is encouraged.</p></div>","PeriodicalId":513,"journal":{"name":"Chemical Papers","volume":"80 1","pages":"57 - 82"},"PeriodicalIF":2.5,"publicationDate":"2025-10-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://link.springer.com/content/pdf/10.1007/s11696-025-04415-8.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147339433","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-10-13DOI: 10.1007/s11696-025-04431-8
Abdullahi Ibrahim Uba
The glucagon-like peptide-1 receptor (GLP-1R), a class B G protein-coupled receptor (GPCR), plays an essential role in regulating blood sugar and is a validated target for treating type 2 diabetes mellitus (T2DM) and obesity. The importance of negative allosteric modulators (NAMs) of GLP-1R—especially those derived from natural compounds—is an emerging and relatively underexplored area in pharmacology. This study aims to identify new natural product-derived GLP-1R NAMs through an integrated computational approach. Molecular docking was conducted on 100 natural compounds, including phenolics, flavonoids, alkaloids, anthraquinones, and terpenoids, targeting the allosteric site of GLP-1R. The top candidates with favorable docking scores were further examined with 200 ns molecular dynamics (MD) simulations to assess their binding stability. MM-GBSA calculations estimated the binding free energy of the receptor–ligand complexes. Two natural compounds, strictinin and verbascoside, demonstrated stable binding modes with Glide XP docking scores of − 8.41 and − 8.17 kcal/mol, respectively, along with the corresponding MM-GBSA binding energies of − 65.8 ± 4.2 and − 61.3 ± 5.7 kcal/mol. These results are comparable to the reference NAM, PF-06372222, which had Glide XP docking and MM-GBSA binding energy scores of –6.68 and –58.9 ± 6.1 kcal/mol, respectively. By highlighting the potential of bioactive plant metabolites to allosterically modulate GLP-1R function, these findings suggest their promise as scaffolds for developing new GLP-1R-targeted therapies.
{"title":"Exploration of natural compounds as potential negative allosteric modulators of glucagon-like peptide-1 receptor through molecular docking and dynamics simulation coupled with MM-GBSA binding energy calculations","authors":"Abdullahi Ibrahim Uba","doi":"10.1007/s11696-025-04431-8","DOIUrl":"10.1007/s11696-025-04431-8","url":null,"abstract":"<div><p>The glucagon-like peptide-1 receptor (GLP-1R), a class B G protein-coupled receptor (GPCR), plays an essential role in regulating blood sugar and is a validated target for treating type 2 diabetes mellitus (T2DM) and obesity. The importance of negative allosteric modulators (NAMs) of GLP-1R—especially those derived from natural compounds—is an emerging and relatively underexplored area in pharmacology. This study aims to identify new natural product-derived GLP-1R NAMs through an integrated computational approach. Molecular docking was conducted on 100 natural compounds, including phenolics, flavonoids, alkaloids, anthraquinones, and terpenoids, targeting the allosteric site of GLP-1R. The top candidates with favorable docking scores were further examined with 200 ns molecular dynamics (MD) simulations to assess their binding stability. MM-GBSA calculations estimated the binding free energy of the receptor–ligand complexes. Two natural compounds, strictinin and verbascoside, demonstrated stable binding modes with Glide XP docking scores of − 8.41 and − 8.17 kcal/mol, respectively, along with the corresponding MM-GBSA binding energies of − 65.8 ± 4.2 and − 61.3 ± 5.7 kcal/mol. These results are comparable to the reference NAM, PF-06372222, which had Glide XP docking and MM-GBSA binding energy scores of –6.68 and –58.9 ± 6.1 kcal/mol, respectively. By highlighting the potential of bioactive plant metabolites to allosterically modulate GLP-1R function, these findings suggest their promise as scaffolds for developing new GLP-1R-targeted therapies.</p></div>","PeriodicalId":513,"journal":{"name":"Chemical Papers","volume":"80 1","pages":"821 - 836"},"PeriodicalIF":2.5,"publicationDate":"2025-10-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147339435","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-10-12DOI: 10.1007/s11696-025-04402-z
V. Kayalvizhi, M. Divya Bharathi, K. Subhikksha, Paavai Era, F. Mary Anjalin, Muthumareeswaran Muthuramamoorthy, Shofiur Rahman, A. Raja, A. Shameem, RO. MU. Jauhar
Crystals throughout the years reported in the literature are high in quality and have shown good results experimentally when compared with other nanomaterials. But practically there are minimal defects, impurities and inhomogeneities by nature due to their physical or chemical conditions which can be observed and measured by their properties. Most of the physical properties are sensitive to deviation from ideality. Hence, theoretical outsourcing is mandatory in addition to their experimental characteristic properties. The essential component of defective crystal can be described, confronted and explained by their mechanism of growth, composition of crystallographic structure and properties along their molecular bonding insight, respectively. The peer-grown crystals of lithium 4-methyl-3-nitrobenzoate dihydrate are subjected to standard conventional characterization procedures followed by their theoretical evaluations on the elementary electrochemical parameters using solid-state analyses and electron transport-dependent dielectric functions which were carried out at different temperatures to prove the anisotropic nature of the grown crystals, the photoabsorption characteristics using electro-optic measurements that reveal its absorption coefficient along with the refractive index and extinction coefficient, thermal characteristics using kinetic parameters from thermogravimetric data revealing the activation energy, enthalpy and Gibb’s free energy of the grown crystal. Moreover, the dc conductivity of the material was also calculated from the Nyquist’s plot by impedance analysis for material’s suitability for the photonic applications and the fracture mechanic from hardness analysis to showcase the mechanical stability of the grown crystal.
{"title":"A photonic approach on a solid-state semi-organic lithium 4-methyl-3-nitrobenzoate dihydrate crystals for device parameter analyses","authors":"V. Kayalvizhi, M. Divya Bharathi, K. Subhikksha, Paavai Era, F. Mary Anjalin, Muthumareeswaran Muthuramamoorthy, Shofiur Rahman, A. Raja, A. Shameem, RO. MU. Jauhar","doi":"10.1007/s11696-025-04402-z","DOIUrl":"10.1007/s11696-025-04402-z","url":null,"abstract":"<div><p>Crystals throughout the years reported in the literature are high in quality and have shown good results experimentally when compared with other nanomaterials. But practically there are minimal defects, impurities and inhomogeneities by nature due to their physical or chemical conditions which can be observed and measured by their properties. Most of the physical properties are sensitive to deviation from ideality. Hence, theoretical outsourcing is mandatory in addition to their experimental characteristic properties. The essential component of defective crystal can be described, confronted and explained by their mechanism of growth, composition of crystallographic structure and properties along their molecular bonding insight, respectively. The peer-grown crystals of lithium 4-methyl-3-nitrobenzoate dihydrate are subjected to standard conventional characterization procedures followed by their theoretical evaluations on the elementary electrochemical parameters using solid-state analyses and electron transport-dependent dielectric functions which were carried out at different temperatures to prove the anisotropic nature of the grown crystals, the photoabsorption characteristics using electro-optic measurements that reveal its absorption coefficient along with the refractive index and extinction coefficient, thermal characteristics using kinetic parameters from thermogravimetric data revealing the activation energy, enthalpy and Gibb’s free energy of the grown crystal. Moreover, the dc conductivity of the material was also calculated from the Nyquist’s plot by impedance analysis for material’s suitability for the photonic applications and the fracture mechanic from hardness analysis to showcase the mechanical stability of the grown crystal.</p></div>","PeriodicalId":513,"journal":{"name":"Chemical Papers","volume":"80 1","pages":"437 - 448"},"PeriodicalIF":2.5,"publicationDate":"2025-10-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147338726","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-10-12DOI: 10.1007/s11696-025-04410-z
Archana Rajmane, Arjun Kumbhar
This review outlines a strategic method for immobilizing DABCO-based ionic liquids (ILs) on various solid supports to facilitate multi-component reactions (MCRs). DABCO (1,4-diazabicyclo[2.2.2]octane) is a rigid, nitrogen-rich bicyclic amine that has been functionalized to create a series of task-specific ILs. The immobilization of these ILs combines the advantages of traditional ILs with the practical benefits of heterogeneous catalysis. Attaching DABCO-based ILs to solid supports enhances their recovery and reusability while maintaining consistent catalytic activity. Various studies have evaluated their performance across different MCRs, demonstrating high yields, short reaction times, and mild conditions. Spectroscopic and analytical techniques have confirmed the structural integrity and stability of these catalysts. These catalysts function as both base and acid catalysts, facilitating substrate activation and improving reaction kinetics. Recycling studies showed minimal activity loss over multiple cycles, emphasizing their sustainability. The heterogeneous nature of the catalysts allows their easy separation from the reaction mixture, aligning with green chemistry principles. This review presents a versatile and eco-friendly platform for developing recyclable DABCO-based heterogeneous catalysts suitable for a broad range of organic transformations.