Pub Date : 2026-12-01Epub Date: 2026-01-27DOI: 10.1080/21645698.2026.2614130
Ali Raza, Yiran Li, Sidra Charagh, Chunli Guo, Mengkai Zhao, Zhangli Hu
Climate change-driven single and combined abiotic stresses pose escalating threats to sustainable, climate-smart agriculture and global food security. Melatonin (MLT, a powerful plant biostimulant) has established noteworthy potential in improving stress tolerance by regulating diverse physiological, biochemical, and molecular responses. Therefore, this review delivers a comprehensive synopsis of MLT-enabled omics responses across genomics, transcriptomics, proteomics, metabolomics, miRNAomics, epigenomics, phenomics, ionomics, and microbiomics levels that collectively regulate plant adaptation to multiple abiotic stresses. We also highlight the crosstalk between these omics layers and the power of integrated multi-omics (panomics) approaches to harness the complex regulatory networks underlying MLT-enabled stress tolerance. Lastly, we argue for translating these omics insights into actionable strategies through advanced genetic engineering and synthetic biology platforms to develop MLT-enabled, stress-smart crop plants.
{"title":"Melatonin-enabled omics: understanding plant responses to single and combined abiotic stresses for climate-smart agriculture.","authors":"Ali Raza, Yiran Li, Sidra Charagh, Chunli Guo, Mengkai Zhao, Zhangli Hu","doi":"10.1080/21645698.2026.2614130","DOIUrl":"10.1080/21645698.2026.2614130","url":null,"abstract":"<p><p>Climate change-driven single and combined abiotic stresses pose escalating threats to sustainable, climate-smart agriculture and global food security. Melatonin (MLT, a powerful plant biostimulant) has established noteworthy potential in improving stress tolerance by regulating diverse physiological, biochemical, and molecular responses. Therefore, this review delivers a comprehensive synopsis of MLT-enabled omics responses across genomics, transcriptomics, proteomics, metabolomics, miRNAomics, epigenomics, phenomics, ionomics, and microbiomics levels that collectively regulate plant adaptation to multiple abiotic stresses. We also highlight the crosstalk between these omics layers and the power of integrated multi-omics (panomics) approaches to harness the complex regulatory networks underlying MLT-enabled stress tolerance. Lastly, we argue for translating these omics insights into actionable strategies through advanced genetic engineering and synthetic biology platforms to develop MLT-enabled, stress-smart crop plants.</p>","PeriodicalId":54282,"journal":{"name":"Gm Crops & Food-Biotechnology in Agriculture and the Food Chain","volume":"17 1","pages":"2614130"},"PeriodicalIF":4.7,"publicationDate":"2026-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12851399/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146055237","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-01Epub Date: 2025-03-09DOI: 10.1080/21645698.2025.2477231
Chelsea Sutherland, Savannah Gleim, Simona Lubieniechi, Stuart J Smyth
Genetically modified crop adoption in Canada has been the key driver in removing tillage as the lead form of weed control, due to increased weed control efficiency. Land use has transitioned from the use of summerfallow to continuous cropping, predominantly involving zero or minimum tillage practices. Prairie crop rotations have diversified away from mainly cereals to include three-year rotations of cereals, pulses, and oilseeds. Total herbicide volume applied has increased as crop production acres increased, but the rate of herbicide active ingredient applied per hectare has declined. Diverse crop rotations allow for weed control using herbicides with different modes of action, reducing selection pressure for resistant weed development. Herbicide-resistant weeds are an important concern for farmers, as the loss of key herbicides would make weed control exceedingly more difficult. The objective of this case study is to examine herbicide resistance weed development in the Canadian Prairies and to identify changes in resistance development following GM crop adoption.
{"title":"Rate of herbicide resistant weed development: A Canadian Prairie case study.","authors":"Chelsea Sutherland, Savannah Gleim, Simona Lubieniechi, Stuart J Smyth","doi":"10.1080/21645698.2025.2477231","DOIUrl":"10.1080/21645698.2025.2477231","url":null,"abstract":"<p><p>Genetically modified crop adoption in Canada has been the key driver in removing tillage as the lead form of weed control, due to increased weed control efficiency. Land use has transitioned from the use of summerfallow to continuous cropping, predominantly involving zero or minimum tillage practices. Prairie crop rotations have diversified away from mainly cereals to include three-year rotations of cereals, pulses, and oilseeds. Total herbicide volume applied has increased as crop production acres increased, but the rate of herbicide active ingredient applied per hectare has declined. Diverse crop rotations allow for weed control using herbicides with different modes of action, reducing selection pressure for resistant weed development. Herbicide-resistant weeds are an important concern for farmers, as the loss of key herbicides would make weed control exceedingly more difficult. The objective of this case study is to examine herbicide resistance weed development in the Canadian Prairies and to identify changes in resistance development following GM crop adoption.</p>","PeriodicalId":54282,"journal":{"name":"Gm Crops & Food-Biotechnology in Agriculture and the Food Chain","volume":"16 1","pages":"252-262"},"PeriodicalIF":4.5,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11901363/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143588195","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-01Epub Date: 2025-02-27DOI: 10.1080/21645698.2025.2472451
Xiaoxing Yu, Hongyu Gao, Pengfei Wang
The safety assessment of stacked transgenic crops is essential for their commercial cultivation. A crucial element of safety assessment is the nutritional evaluation of transgenic crops. Currently, profiling methods like transcriptome are employed as supplemental analytical tools to find the unintended effects of transgenic crops. In this study, stacked transgenic maize ZDRF8×nCX-1 was produced by crossing of two transgenic maize events ZDRF8 and nCX-1. This stacked transgenic maize expresses five genes: cry1Ab, cry2Ab and g10evo-epsps (from ZDRF8), as well as cp4 epsps and P450-N-Z1 (from nCX-1). Molecular analysis showed that the insertion sites of target genes were not changed during stack breeding, and the target genes are effectively expressed at both RNA and protein levels in ZDRF8×nCX-1. Target trait analysis showed that ZDRF8×nCX-1 exhibits tolerant to glyphosate, flazasulfuron and MCPA, and is resistant to damage by corn borers. Transcriptome analysis revealed that gene-stacked maize ZDRF8×nCX-1 did not significantly alter transcriptome profiles compared to the transgenic maize events ZDRF8 and nCX-1. Nutritional composition analysis showed that the grain profile of ZDRF8×nCX-1 was substantially equivalent to that of the non-transgenic counterpart. These results suggest that hybrid stacking does not cause significantly unintended effects beyond providing the intended beneficial traits.
{"title":"Transcriptome and nutritional composition analysis of stacked transgenic maize with insect resistance and herbicide tolerance.","authors":"Xiaoxing Yu, Hongyu Gao, Pengfei Wang","doi":"10.1080/21645698.2025.2472451","DOIUrl":"10.1080/21645698.2025.2472451","url":null,"abstract":"<p><p>The safety assessment of stacked transgenic crops is essential for their commercial cultivation. A crucial element of safety assessment is the nutritional evaluation of transgenic crops. Currently, profiling methods like transcriptome are employed as supplemental analytical tools to find the unintended effects of transgenic crops. In this study, stacked transgenic maize ZDRF8×nCX-1 was produced by crossing of two transgenic maize events ZDRF8 and nCX-1. This stacked transgenic maize expresses five genes: <i>cry1Ab</i>, <i>cry2Ab</i> and <i>g10evo-epsps</i> (from ZDRF8), as well as <i>cp4 epsps</i> and <i>P450-N-Z1</i> (from nCX-1). Molecular analysis showed that the insertion sites of target genes were not changed during stack breeding, and the target genes are effectively expressed at both RNA and protein levels in ZDRF8×nCX-1. Target trait analysis showed that ZDRF8×nCX-1 exhibits tolerant to glyphosate, flazasulfuron and MCPA, and is resistant to damage by corn borers. Transcriptome analysis revealed that gene-stacked maize ZDRF8×nCX-1 did not significantly alter transcriptome profiles compared to the transgenic maize events ZDRF8 and nCX-1. Nutritional composition analysis showed that the grain profile of ZDRF8×nCX-1 was substantially equivalent to that of the non-transgenic counterpart. These results suggest that hybrid stacking does not cause significantly unintended effects beyond providing the intended beneficial traits.</p>","PeriodicalId":54282,"journal":{"name":"Gm Crops & Food-Biotechnology in Agriculture and the Food Chain","volume":"16 1","pages":"216-234"},"PeriodicalIF":4.5,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11875497/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143525246","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-01Epub Date: 2025-03-23DOI: 10.1080/21645698.2025.2479913
Svante Resjö, Iqra, Nam P Kieu, Muhammad Awais Zahid, Marit Lenman, Björn Andersson, Erik Andreasson
Potato (Solanum tuberosum L.) is an important global crop, but its production is severely impacted by late blight, caused by the pathogen Phytophthora infestans. The economic burden of this disease is significant, and current control strategies rely mainly on fungicides, which face increasing regulatory and environmental constraints. To address this challenge, potatoes with resistance genes from wild potato relatives offer a promising solution. This study evaluated field resistance to late blight in potato lines (Maris Piper) containing the Solanum americanum resistance genes Rpi-amr3 and Rpi-amr1 across three years (2018-2020) in Sweden. Field trials were conducted under natural infection conditions to assess disease resistance. Results showed that the transgenic lines conferred strong resistance to late blight compared to the susceptible control. However, slight late blight symptoms were observed in the transgenic lines. These results highlight the effectiveness of S. americanum resistance genes in providing strong resistance, and emphasize the potential of stacking multiple R genes, including these genes to maintain efficacy. This research supports the development of resistant potato varieties as a sustainable alternative to chemical control, promoting food security and environmentally friendly agriculture.
{"title":"Late blight field resistance in potatoes carrying <i>Solanum americanum</i> resistance genes (Rpi-amr3 and Rpi-amr1).","authors":"Svante Resjö, Iqra, Nam P Kieu, Muhammad Awais Zahid, Marit Lenman, Björn Andersson, Erik Andreasson","doi":"10.1080/21645698.2025.2479913","DOIUrl":"10.1080/21645698.2025.2479913","url":null,"abstract":"<p><p>Potato (<i>Solanum tuberosum</i> L.) is an important global crop, but its production is severely impacted by late blight, caused by the pathogen <i>Phytophthora infestans</i>. The economic burden of this disease is significant, and current control strategies rely mainly on fungicides, which face increasing regulatory and environmental constraints. To address this challenge, potatoes with resistance genes from wild potato relatives offer a promising solution. This study evaluated field resistance to late blight in potato lines (Maris Piper) containing the <i>Solanum americanum</i> resistance genes <i>Rpi-amr3</i> and <i>Rpi-amr1</i> across three years (2018-2020) in Sweden. Field trials were conducted under natural infection conditions to assess disease resistance. Results showed that the transgenic lines conferred strong resistance to late blight compared to the susceptible control. However, slight late blight symptoms were observed in the transgenic lines. These results highlight the effectiveness of <i>S. americanum</i> resistance genes in providing strong resistance, and emphasize the potential of stacking multiple R genes, including these genes to maintain efficacy. This research supports the development of resistant potato varieties as a sustainable alternative to chemical control, promoting food security and environmentally friendly agriculture.</p>","PeriodicalId":54282,"journal":{"name":"Gm Crops & Food-Biotechnology in Agriculture and the Food Chain","volume":"16 1","pages":"263-271"},"PeriodicalIF":4.5,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11934159/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143694331","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-01Epub Date: 2024-12-31DOI: 10.1080/21645698.2024.2439116
Kent Brink, Tim Gunderson, Matthew Harmon, Kristine LeRoy, Margit Ross, Anitha S C, Brian Stolte, John Zhang
Genetically modified maize event DP-915635-4 expressing the IPD079Ea protein was developed to control corn rootworm damage to maize plants. Utilizing a modernized safety assessment model published by CropLife International (CLI), the safety of DP-915635-4 maize was assessed. The CLI core studies included were molecular characterization of the inserted DNA, expression and characterization of the expressed IPD079Ea protein, and its safety for both food and feed use and the environment. No hazards were identified for human or animal consumption of DP-915635-4 maize containing the IPD079Ea protein, indicating that supplementary studies were not necessary. An environmental risk assessment was performed to characterize any potential impacts to non-target organisms, the results of which established that DP-915635-4 maize is unlikely to result in unreasonable adverse effects to non-target organisms. This case study shows that the modernized safety assessment is effective at demonstrating the safety of genetically modified crop plants.
为防治根虫对玉米植株的危害,开发了表达IPD079Ea蛋白的玉米转基因事件DP-915635-4。利用CropLife International (CLI)发布的现代化安全评价模型,对DP-915635-4玉米的安全性进行了评价。CLI核心研究包括插入DNA的分子表征、表达的IPD079Ea蛋白的表达和表征,以及其对食品和饲料使用和环境的安全性。没有发现含有IPD079Ea蛋白的DP-915635-4玉米对人类或动物的危害,表明没有必要进行补充研究。进行了环境风险评估,以表征对非目标生物的任何潜在影响,其结果确定DP-915635-4玉米不太可能对非目标生物造成不合理的不利影响。本案例研究表明,现代化的安全评价方法能够有效地论证转基因作物的安全性。
{"title":"Science-based safety assessment of genetically modified DP915635 maize.","authors":"Kent Brink, Tim Gunderson, Matthew Harmon, Kristine LeRoy, Margit Ross, Anitha S C, Brian Stolte, John Zhang","doi":"10.1080/21645698.2024.2439116","DOIUrl":"10.1080/21645698.2024.2439116","url":null,"abstract":"<p><p>Genetically modified maize event DP-915635-4 expressing the IPD079Ea protein was developed to control corn rootworm damage to maize plants. Utilizing a modernized safety assessment model published by CropLife International (CLI), the safety of DP-915635-4 maize was assessed. The CLI core studies included were molecular characterization of the inserted DNA, expression and characterization of the expressed IPD079Ea protein, and its safety for both food and feed use and the environment. No hazards were identified for human or animal consumption of DP-915635-4 maize containing the IPD079Ea protein, indicating that supplementary studies were not necessary. An environmental risk assessment was performed to characterize any potential impacts to non-target organisms, the results of which established that DP-915635-4 maize is unlikely to result in unreasonable adverse effects to non-target organisms. This case study shows that the modernized safety assessment is effective at demonstrating the safety of genetically modified crop plants.</p>","PeriodicalId":54282,"journal":{"name":"Gm Crops & Food-Biotechnology in Agriculture and the Food Chain","volume":"16 1","pages":"72-82"},"PeriodicalIF":4.7,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11702926/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145726867","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-01Epub Date: 2025-03-19DOI: 10.1080/21645698.2025.2476667
Lelethu Mdoda, Nthabeleng Tamako, Lungile S Gidi, Denver Naidoo
Agriculture is essential to South Africa's economy, and maize is a crucial crop for smallholder farmers in the Eastern Cape. Traditional maize varieties face challenges related to productivity and resilience, prompting the promotion of Improved Maize Varieties (IMVs) to enhance yields and efficiency. This study investigates the impact of IMV adoption on agricultural productivity and technical efficiency in the region, addressing a gap in empirical evidence. Using a multistage random sampling approach, data was collected from 150 smallholder maize farmers and analyzed using stochastic production frontier, endogenous switching regression models, and the stochastic meta-frontier model. The study results reveal that 62% of the farmers are male, averaging 53 years old, and manage about four hectares with a mean monthly income of ZAR 3,562.13. Challenges, such as rainfall shortages and limited access to credit, hinder IMV adoption, although high access to extension services and diverse input use positively affect productivity. The adopted IMVs by farmers, including open-pollinated, hybrid, and genetically modified (GM) varieties, significantly boost maize yields and farm returns - yielding an average increase of 1.92 kg/ha and returns of ZAR 468.01 per hectare. Key adoption factors are education, farm size, and access to seeds and extension services, whereas barriers include market distance and family size. Technical efficiency is generally high at 74%, with farm size, seed, pesticides, agrochemicals, and fertilizers positively impacting maize production, whereas family labor negatively affects it. Factors such as age, education, and access to services significantly reduce technical inefficiency, while herd size, off-farm income, and distance to the market have mixed effects. The stochastic meta-frontier approach reveals that smallholder farmers adopting improved technologies show higher mean technical efficiency, indicating that advanced methods contribute to better resource use and productivity than traditional systems. This study suggests that targeted support is needed for farmers, enhancing access to extension services, affordable seeds, financial support, and investing in infrastructure and education can further improve adoption rates, technical efficiency, and overall productivity. Promoting improved technologies such as maize varieties will enhance the technical efficiency of farms, regardless of their adoption status. It would be key to improving overall agricultural productivity and farm household incomes.
{"title":"Evaluating the impact of improved maize varieties on agricultural productivity and technical efficiency among smallholder farmers in the Eastern Cape, South Africa: an empirical analysis.","authors":"Lelethu Mdoda, Nthabeleng Tamako, Lungile S Gidi, Denver Naidoo","doi":"10.1080/21645698.2025.2476667","DOIUrl":"10.1080/21645698.2025.2476667","url":null,"abstract":"<p><p>Agriculture is essential to South Africa's economy, and maize is a crucial crop for smallholder farmers in the Eastern Cape. Traditional maize varieties face challenges related to productivity and resilience, prompting the promotion of Improved Maize Varieties (IMVs) to enhance yields and efficiency. This study investigates the impact of IMV adoption on agricultural productivity and technical efficiency in the region, addressing a gap in empirical evidence. Using a multistage random sampling approach, data was collected from 150 smallholder maize farmers and analyzed using stochastic production frontier, endogenous switching regression models, and the stochastic meta-frontier model. The study results reveal that 62% of the farmers are male, averaging 53 years old, and manage about four hectares with a mean monthly income of ZAR 3,562.13. Challenges, such as rainfall shortages and limited access to credit, hinder IMV adoption, although high access to extension services and diverse input use positively affect productivity. The adopted IMVs by farmers, including open-pollinated, hybrid, and genetically modified (GM) varieties, significantly boost maize yields and farm returns - yielding an average increase of 1.92 kg/ha and returns of ZAR 468.01 per hectare. Key adoption factors are education, farm size, and access to seeds and extension services, whereas barriers include market distance and family size. Technical efficiency is generally high at 74%, with farm size, seed, pesticides, agrochemicals, and fertilizers positively impacting maize production, whereas family labor negatively affects it. Factors such as age, education, and access to services significantly reduce technical inefficiency, while herd size, off-farm income, and distance to the market have mixed effects. The stochastic meta-frontier approach reveals that smallholder farmers adopting improved technologies show higher mean technical efficiency, indicating that advanced methods contribute to better resource use and productivity than traditional systems. This study suggests that targeted support is needed for farmers, enhancing access to extension services, affordable seeds, financial support, and investing in infrastructure and education can further improve adoption rates, technical efficiency, and overall productivity. Promoting improved technologies such as maize varieties will enhance the technical efficiency of farms, regardless of their adoption status. It would be key to improving overall agricultural productivity and farm household incomes.</p>","PeriodicalId":54282,"journal":{"name":"Gm Crops & Food-Biotechnology in Agriculture and the Food Chain","volume":"16 1","pages":"272-304"},"PeriodicalIF":4.5,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11925116/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143659599","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-01Epub Date: 2024-12-24DOI: 10.1080/21645698.2024.2438421
Yimeng Wang, Peng Jiao, Chenyang Wu, Chunlai Wang, Ke Shi, Xiaoqi Gao, Shuyan Guan, Yiyong Ma
Maize (Zea mays L.) is a major food and feed crop and an important raw material for energy, chemicals, and livestock. The NF-Y family of transcription factors in maize plays a crucial role in the regulation of plant development and response to environmental stress. In this study, we successfully cloned and characterized the maize NF-Y transcription factor gene ZmNF-YB10. We used bioinformatics, quantitative fluorescence PCR, and other techniques to analyze the basic properties of the gene, its tissue expression specificity, and its role in response to drought, salt, and other stresses. The results indicated that the gene was 1209 base pairs (bp) in length, with a coding sequence (CDS) region of 618 bp, encoding a polypeptide composed of 205 amino acid residues. This polypeptide has a theoretical isoelectric point of 5.85 and features a conserved structural domain unique to the NF-Y family. Quantitative fluorescence PCR results demonstrated that the ZmNF-YB10 gene was differentially upregulated under drought and salt stress treatments but exhibited a negatively regulated expression pattern under alkali and cold stress treatments. Transgenic Arabidopsis thaliana subjected to drought and salt stress in soil showed greener leaves than wild-type A. thaliana. In addition, the overexpression lines showed reduced levels of hydrogen peroxide (H2O2), superoxide (O2-), and malondialdehyde (MDA) and increased activities of peroxidase (POD), catalase (CAT), and superoxide dismutase (SOD). Western blot analysis revealed a distinct band at 21.8 kDa. Salt and drought tolerance analyses conducted in E. coli BL21 indicated a positive regulation. In yeast cells, ZmNF-YB10 exhibited a biological function that enhances salt and drought tolerance. Protein interactions were observed among the ZmNF-YB10, ZmNF-YC2, and ZmNF-YC4 genes. It is hypothesized that the ZmNF-YB10, ZmNF-YC2, and ZmNF-YC4 genes may play a role in the response to abiotic stresses, such as drought and salt tolerance, in maize.
{"title":"<i>ZmNF-YB10</i>, a maize NF-Y transcription factor, positively regulates drought and salt stress response in <i>Arabidopsis thaliana</i>.","authors":"Yimeng Wang, Peng Jiao, Chenyang Wu, Chunlai Wang, Ke Shi, Xiaoqi Gao, Shuyan Guan, Yiyong Ma","doi":"10.1080/21645698.2024.2438421","DOIUrl":"https://doi.org/10.1080/21645698.2024.2438421","url":null,"abstract":"<p><p>Maize (<i>Zea mays</i> L.) is a major food and feed crop and an important raw material for energy, chemicals, and livestock. The NF-Y family of transcription factors in maize plays a crucial role in the regulation of plant development and response to environmental stress. In this study, we successfully cloned and characterized the maize NF-Y transcription factor gene <i>ZmNF-YB10</i>. We used bioinformatics, quantitative fluorescence PCR, and other techniques to analyze the basic properties of the gene, its tissue expression specificity, and its role in response to drought, salt, and other stresses. The results indicated that the gene was 1209 base pairs (bp) in length, with a coding sequence (CDS) region of 618 bp, encoding a polypeptide composed of 205 amino acid residues. This polypeptide has a theoretical isoelectric point of 5.85 and features a conserved structural domain unique to the NF-Y family. Quantitative fluorescence PCR results demonstrated that the <i>ZmNF-YB10</i> gene was differentially upregulated under drought and salt stress treatments but exhibited a negatively regulated expression pattern under alkali and cold stress treatments. Transgenic <i>Arabidopsis thaliana</i> subjected to drought and salt stress in soil showed greener leaves than wild-type <i>A. thaliana</i>. In addition, the overexpression lines showed reduced levels of hydrogen peroxide (H<sub>2</sub>O<sub>2</sub>), superoxide (O<sup>2-</sup>), and malondialdehyde (MDA) and increased activities of peroxidase (POD), catalase (CAT), and superoxide dismutase (SOD). Western blot analysis revealed a distinct band at 21.8 kDa. Salt and drought tolerance analyses conducted in <i>E. coli</i> BL21 indicated a positive regulation. In yeast cells, <i>ZmNF-YB10</i> exhibited a biological function that enhances salt and drought tolerance. Protein interactions were observed among the <i>ZmNF-YB10</i>, <i>ZmNF-YC2</i>, and <i>ZmNF-YC4</i> genes. It is hypothesized that the <i>ZmNF-YB10, ZmNF-YC2</i>, and <i>ZmNF-YC4</i> genes may play a role in the response to abiotic stresses, such as drought and salt tolerance, in maize.</p>","PeriodicalId":54282,"journal":{"name":"Gm Crops & Food-Biotechnology in Agriculture and the Food Chain","volume":"16 1","pages":"28-45"},"PeriodicalIF":4.5,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142883647","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-01Epub Date: 2025-03-31DOI: 10.1080/21645698.2025.2486280
Xinyue Wang, Jingwen Li, Yuxue Zhou, Jinhao Zhang, Le Wang, Yajing Liu, Xuguang Yang, Hongshuang Han, Qingyu Wang, Ying Wang
Biological nitrogen fixation (BNF) is the most cost-effective and environmentally benign method for nitrogen fertilization. Isoflavones are important signaling factors for BNF in leguminous plants. Whether chalcone isomerase (CHI), the key enzyme gene in the flavonoid synthesis pathway, contributes to soybean (Glycine max) nodulation has not yet been fully clarified. In the present study, we identified the functions of three types of GmCHI for BNF using a hairy root system. The results showed that GmCHI1A and GmCHI1B1 positively increased nodulation while GmCHI1B2 did not, with the GmCHI1A gene having a greater effect than GmCHI1B1. Meanwhile, the daidzein and genistein contents were significantly increased in composite plants overexpressing GmCHI1A and reduced in composite plants, thus interfering with GmCHI1A. However, overexpression of GmCHI1B1 significantly increased the content of glycitein but not daidzein, genistein content implied that homologous genes exhibit functional differentiation. These results provide a reference for subsequent studies on improving nitrogen fixation in soybeans and providing functional genes for the improvement of new varieties.
{"title":"Functional analysis of type II chalcone isomerase (<i>CHI</i>) genes in regulating soybean (<i>Glycine max L</i>.) nodule formation.","authors":"Xinyue Wang, Jingwen Li, Yuxue Zhou, Jinhao Zhang, Le Wang, Yajing Liu, Xuguang Yang, Hongshuang Han, Qingyu Wang, Ying Wang","doi":"10.1080/21645698.2025.2486280","DOIUrl":"10.1080/21645698.2025.2486280","url":null,"abstract":"<p><p>Biological nitrogen fixation (BNF) is the most cost-effective and environmentally benign method for nitrogen fertilization. Isoflavones are important signaling factors for BNF in leguminous plants. Whether chalcone isomerase (<i>CHI</i>), the key enzyme gene in the flavonoid synthesis pathway, contributes to soybean (<i>Glycine max</i>) nodulation has not yet been fully clarified. In the present study, we identified the functions of three types of <i>GmCHI</i> for BNF using a hairy root system. The results showed that <i>GmCHI1A</i> and <i>GmCHI1B1</i> positively increased nodulation while <i>GmCHI1B2</i> did not, with the <i>GmCHI1A</i> gene having a greater effect than <i>GmCHI1B1</i>. Meanwhile, the daidzein and genistein contents were significantly increased in composite plants overexpressing <i>GmCHI1A</i> and reduced in composite plants, thus interfering with <i>GmCHI1A</i>. However, overexpression of <i>GmCHI1B1</i> significantly increased the content of glycitein but not daidzein, genistein content implied that homologous genes exhibit functional differentiation. These results provide a reference for subsequent studies on improving nitrogen fixation in soybeans and providing functional genes for the improvement of new varieties.</p>","PeriodicalId":54282,"journal":{"name":"Gm Crops & Food-Biotechnology in Agriculture and the Food Chain","volume":"16 1","pages":"305-317"},"PeriodicalIF":4.5,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11970754/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143755990","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-01Epub Date: 2022-10-06DOI: 10.1080/21645698.2022.2120313
Naglaa A Abdallah, Hany Elsharawy, Hamiss A Abulela, Roger Thilmony, Abdelhadi A Abdelhadi, Nagwa I Elarabi
Genome editing tools have rapidly been adopted by plant scientists for crop improvement. Genome editing using a multiplex sgRNA-CRISPR/Cas9 genome editing system is a useful technique for crop improvement in monocot species. In this study, we utilized precise gene editing techniques to generate wheat 3'(2'), 5'-bisphosphate nucleotidase (TaSal1) mutants using a multiplex sgRNA-CRISPR/Cas9 genome editing system. Five active TaSal1 homologous genes were found in the genome of Giza168 in addition to another apparently inactive gene on chromosome 4A. Three gRNAs were designed and used to target exons 4, 5 and 7 of the five wheat TaSal1 genes. Among the 120 Giza168 transgenic plants, 41 lines exhibited mutations and produced heritable TaSal1 mutations in the M1 progeny and 5 lines were full 5 gene knock-outs. These mutant plants exhibit a rolled-leaf phenotype in young leaves and bended stems, but there were no significant changes in the internode length and width, leaf morphology, and stem shape. Anatomical and scanning electron microscope studies of the young leaves of mutated TaSal1 lines showed closed stomata, increased stomata width and increase in the size of the bulliform cells. Sal1 mutant seedlings germinated and grew better on media containing polyethylene glycol than wildtype seedlings. Our results indicate that the application of the multiplex sgRNA-CRISPR/Cas9 genome editing is efficient tool for mutating more multiple TaSal1 loci in hexaploid wheat.
{"title":"Multiplex CRISPR/Cas9-mediated genome editing to address drought tolerance in wheat.","authors":"Naglaa A Abdallah, Hany Elsharawy, Hamiss A Abulela, Roger Thilmony, Abdelhadi A Abdelhadi, Nagwa I Elarabi","doi":"10.1080/21645698.2022.2120313","DOIUrl":"10.1080/21645698.2022.2120313","url":null,"abstract":"<p><p>Genome editing tools have rapidly been adopted by plant scientists for crop improvement. Genome editing using a multiplex sgRNA-CRISPR/Cas9 genome editing system is a useful technique for crop improvement in monocot species. In this study, we utilized precise gene editing techniques to generate wheat 3'(2'), 5'-bisphosphate nucleotidase (<i>TaSal1</i>) mutants using a multiplex sgRNA-CRISPR/Cas9 genome editing system. Five active <i>TaSal1</i> homologous genes were found in the genome of Giza168 in addition to another apparently inactive gene on chromosome 4A. Three gRNAs were designed and used to target exons 4, 5 and 7 of the five wheat <i>TaSal1</i> genes. Among the 120 Giza168 transgenic plants, 41 lines exhibited mutations and produced heritable <i>TaSal1</i> mutations in the M<sub>1</sub> progeny and 5 lines were full 5 gene knock-outs. These mutant plants exhibit a rolled-leaf phenotype in young leaves and bended stems, but there were no significant changes in the internode length and width, leaf morphology, and stem shape. Anatomical and scanning electron microscope studies of the young leaves of mutated <i>TaSal1</i> lines showed closed stomata, increased stomata width and increase in the size of the bulliform cells. <i>Sal1</i> mutant seedlings germinated and grew better on media containing polyethylene glycol than wildtype seedlings. Our results indicate that the application of the multiplex sgRNA-CRISPR/Cas9 genome editing is efficient tool for mutating more multiple TaSal1 loci in hexaploid wheat.</p>","PeriodicalId":54282,"journal":{"name":"Gm Crops & Food-Biotechnology in Agriculture and the Food Chain","volume":" ","pages":"1-17"},"PeriodicalIF":4.5,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"33490173","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Flowering time is an important factor limiting the planting area of maize (Zea may L.). Gibberellin (GA) can regulate plant flowering time by mediating the GA signaling pathway. This study screened significantly down-regulated gene ZmGRAS46 by early flowering mutant transcriptomic sequencing (PRJNA788070) in the previous laboratory. The expression pattern analysis of the ZmGRAS46 gene shows that it has the highest expression level in maize stems. The stem treatment with 200 μmol/L GA3 resulted in the lowest expression of ZmGRAS46 at 3 h. Positive maize plants were obtained through the modified Agrobacterium-mediated genetic transformation of maize. The results showed that overexpression of ZmGRAS46 delayed the flowering of maize, and gene editing of ZmGRAS46 made maize blossom earlier. In addition, overexpression of ZmGRAS46 could increase maize 100-grain weight. This study provides new insights into the molecular mechanism of the GRAS gene in regulating plant flowering.
{"title":"<i>ZmGRAS46</i> negatively regulates flowering time in maize.","authors":"Xiaotong Wei, Honglin Zhang, Zhenzhong Jiang, Peng Jiao, Siyan Liu, Shuyan Guan, Yiyong Ma","doi":"10.1080/21645698.2024.2442158","DOIUrl":"10.1080/21645698.2024.2442158","url":null,"abstract":"<p><p>Flowering time is an important factor limiting the planting area of maize (<i>Zea may</i> L.). Gibberellin (GA) can regulate plant flowering time by mediating the GA signaling pathway. This study screened significantly down-regulated gene <i>ZmGRAS46</i> by early flowering mutant transcriptomic sequencing (PRJNA788070) in the previous laboratory. The expression pattern analysis of the <i>ZmGRAS46</i> gene shows that it has the highest expression level in maize stems. The stem treatment with 200 μmol/L GA<sub>3</sub> resulted in the lowest expression of <i>ZmGRAS46</i> at 3 h. Positive maize plants were obtained through the modified Agrobacterium-mediated genetic transformation of maize. The results showed that overexpression of <i>ZmGRAS46</i> delayed the flowering of maize, and gene editing of <i>ZmGRAS46</i> made maize blossom earlier. In addition, overexpression of <i>ZmGRAS46</i> could increase maize 100-grain weight. This study provides new insights into the molecular mechanism of the <i>GRAS</i> gene in regulating plant flowering.</p>","PeriodicalId":54282,"journal":{"name":"Gm Crops & Food-Biotechnology in Agriculture and the Food Chain","volume":"16 1","pages":"83-96"},"PeriodicalIF":4.7,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11702965/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145726796","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}