Pub Date : 2024-08-03DOI: 10.1007/s10980-024-01912-1
Nicholas M. Fountain-Jones, Michael Charleston, Emily J. Flies, Scott Carver, Luke A. Yates
Context
The global impact of the SARS-CoV-2 pandemic has been uneven, with some regions experiencing significant excess mortality while others have been relatively unaffected. Yet factors which predict this variation remain enigmatic, particularly at large spatial scales.
Objectives
We aimed to uncover the key drivers of excess mortality across countries and regions to help understand the factors contributing to the varied impacts of the pandemic worldwide.
Methods
We used spatially explicit Bayesian models that integrate environmental, socio-demographic and endemic disease data at the country level to provide robust global estimates of excess SARS-CoV-2 mortality (P-scores) for the years 2020 and 2021.
Results
We find that urbanization, gross domestic product (GDP) and spatial patterns are strong predictors of excess mortality, with countries characterized by low GDP but high urbanization experiencing the highest levels of excess mortality. Intriguingly, we also observed that the prevalence of malaria and human immunodeficiency virus (HIV) are associated with country-level SARS-CoV-2 excess mortality in Africa and the Western Pacific, whereby countries with low HIV prevalence but high malaria prevalence tend to have lower levels of excess mortality. While these associations are correlative in nature at the macro-scale, they emphasize that patterns of endemic disease and socio-demographic factors are needed to understand the global dynamics of SARS-CoV-2.
Conclusions
Our study identifies factors associated with variation in excess mortality across countries, providing insights into why some were more impacted by the pandemic than others. By understanding these predictors, we can better inform global outbreak management strategies, such as targeting medical resources to highly urban countries with low GDP and high HIV prevalence to reduce mortality during future outbreaks.
背景SARS-CoV-2疫情对全球的影响是不均衡的,一些地区的死亡率严重超标,而另一些地区则相对不受影响。然而,预测这种差异的因素仍然是个谜,尤其是在大的空间尺度上。目标我们的目的是揭示造成各国和各地区死亡率过高的关键因素,以帮助了解造成该流行病在全球范围内产生不同影响的因素。结果我们发现,城市化、国内生产总值(GDP)和空间模式是超额死亡率的有力预测因素,GDP 低但城市化程度高的国家超额死亡率最高。耐人寻味的是,我们还观察到疟疾和人体免疫缺陷病毒(HIV)的流行与非洲和西太平洋地区国家级 SARS-CoV-2 超常死亡率有关,其中 HIV 流行率低但疟疾流行率高的国家往往超常死亡率较低。虽然这些关联在宏观尺度上具有相关性,但它们强调,要了解 SARS-CoV-2 的全球动态,需要了解地方病的模式和社会人口因素。通过了解这些预测因素,我们可以更好地为全球疫情管理策略提供信息,例如将医疗资源集中用于国内生产总值低、艾滋病毒感染率高的高度城市化国家,以降低未来疫情爆发时的死亡率。
{"title":"Why some countries but not others? Urbanisation, GDP and endemic disease predict global SARS-CoV-2 excess mortality patterns","authors":"Nicholas M. Fountain-Jones, Michael Charleston, Emily J. Flies, Scott Carver, Luke A. Yates","doi":"10.1007/s10980-024-01912-1","DOIUrl":"https://doi.org/10.1007/s10980-024-01912-1","url":null,"abstract":"<h3 data-test=\"abstract-sub-heading\">Context</h3><p>The global impact of the SARS-CoV-2 pandemic has been uneven, with some regions experiencing significant excess mortality while others have been relatively unaffected. Yet factors which predict this variation remain enigmatic, particularly at large spatial scales.</p><h3 data-test=\"abstract-sub-heading\">Objectives</h3><p>We aimed to uncover the key drivers of excess mortality across countries and regions to help understand the factors contributing to the varied impacts of the pandemic worldwide.</p><h3 data-test=\"abstract-sub-heading\">Methods</h3><p>We used spatially explicit Bayesian models that integrate environmental, socio-demographic and endemic disease data at the country level to provide robust global estimates of excess SARS-CoV-2 mortality (P-scores) for the years 2020 and 2021.</p><h3 data-test=\"abstract-sub-heading\">Results</h3><p>We find that urbanization, gross domestic product (GDP) and spatial patterns are strong predictors of excess mortality, with countries characterized by low GDP but high urbanization experiencing the highest levels of excess mortality. Intriguingly, we also observed that the prevalence of malaria and human immunodeficiency virus (HIV) are associated with country-level SARS-CoV-2 excess mortality in Africa and the Western Pacific, whereby countries with low HIV prevalence but high malaria prevalence tend to have lower levels of excess mortality. While these associations are correlative in nature at the macro-scale, they emphasize that patterns of endemic disease and socio-demographic factors are needed to understand the global dynamics of SARS-CoV-2.</p><h3 data-test=\"abstract-sub-heading\">Conclusions</h3><p>Our study identifies factors associated with variation in excess mortality across countries, providing insights into why some were more impacted by the pandemic than others. By understanding these predictors, we can better inform global outbreak management strategies, such as targeting medical resources to highly urban countries with low GDP and high HIV prevalence to reduce mortality during future outbreaks.</p>","PeriodicalId":54745,"journal":{"name":"Landscape Ecology","volume":"295 1","pages":""},"PeriodicalIF":5.2,"publicationDate":"2024-08-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141881604","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-08-03DOI: 10.1007/s10980-024-01956-3
Aku Korhonen, Oskar Katavisto, Sylwia Adamczyk, Bartosz Adamczyk, Leena Hamberg
Context
Urban forest soils represent significant reservoirs of biodiversity in cities. Retaining this diversity under urban land-use change requires understanding on how species richness, community assembly and uniqueness of species assemblages are related to local forest characteristics and surrounding landscape structure.
Objectives
Our aim was to assess the significance and relative importance of logging history, tree species composition and urbanization in shaping soil microbial communities across urban spruce-dominated forest landscapes. We investigated responses of microbial diversity from three complementary viewpoints: local diversity, community assembly patterns and community uniqueness.
Methods
We collected soil bacterial and fungal metabarcoding data from 73 spruce-dominated forest sites distributed in three urban centers across southern Finland. We related these data to measurements of logging intensity, tree species composition and degree of urbanization.
Results
Logging intensity, tree species composition and urbanization affected site-scale microbial diversity, but the effects varied between microbial groups. Only logging intensity had a significant imprint on microbial assembly, and this effect was restricted to bacteria. Relative uniqueness of microbial assemblages at the landscape-scale was coupled with the uniqueness of tree species composition in all microbial groups, and further affected by tree diversity in saprotrophic fungi and urbanization in ectomycorrhizal fungi.
Conclusions
In the context of urban spruce-dominated forests, locally diverse tree stands are not necessarily the same as those that contribute the most to landscape-scale diversity. Identifying and preserving contrasting tree stand structures, which support distinctive soil microbial assemblages, may be the winning strategy in maintaining a wide range of soil microbial diversity.
{"title":"Uniqueness of tree stand composition and soil microbial communities are related across urban spruce-dominated forests","authors":"Aku Korhonen, Oskar Katavisto, Sylwia Adamczyk, Bartosz Adamczyk, Leena Hamberg","doi":"10.1007/s10980-024-01956-3","DOIUrl":"https://doi.org/10.1007/s10980-024-01956-3","url":null,"abstract":"<h3 data-test=\"abstract-sub-heading\">Context</h3><p>Urban forest soils represent significant reservoirs of biodiversity in cities. Retaining this diversity under urban land-use change requires understanding on how species richness, community assembly and uniqueness of species assemblages are related to local forest characteristics and surrounding landscape structure.</p><h3 data-test=\"abstract-sub-heading\">Objectives</h3><p>Our aim was to assess the significance and relative importance of logging history, tree species composition and urbanization in shaping soil microbial communities across urban spruce-dominated forest landscapes. We investigated responses of microbial diversity from three complementary viewpoints: local diversity, community assembly patterns and community uniqueness.</p><h3 data-test=\"abstract-sub-heading\">Methods</h3><p>We collected soil bacterial and fungal metabarcoding data from 73 spruce-dominated forest sites distributed in three urban centers across southern Finland. We related these data to measurements of logging intensity, tree species composition and degree of urbanization.</p><h3 data-test=\"abstract-sub-heading\">Results</h3><p>Logging intensity, tree species composition and urbanization affected site-scale microbial diversity, but the effects varied between microbial groups. Only logging intensity had a significant imprint on microbial assembly, and this effect was restricted to bacteria. Relative uniqueness of microbial assemblages at the landscape-scale was coupled with the uniqueness of tree species composition in all microbial groups, and further affected by tree diversity in saprotrophic fungi and urbanization in ectomycorrhizal fungi.</p><h3 data-test=\"abstract-sub-heading\">Conclusions</h3><p>In the context of urban spruce-dominated forests, locally diverse tree stands are not necessarily the same as those that contribute the most to landscape-scale diversity. Identifying and preserving contrasting tree stand structures, which support distinctive soil microbial assemblages, may be the winning strategy in maintaining a wide range of soil microbial diversity.</p>","PeriodicalId":54745,"journal":{"name":"Landscape Ecology","volume":"64 1","pages":""},"PeriodicalIF":5.2,"publicationDate":"2024-08-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141887003","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-08-03DOI: 10.1007/s10980-024-01952-7
M. Dennis, J. J. Huck, C. D. Holt, P. da Conceição Bispo, E. McHenry, A. Speak, P. James
Context
Understanding habitat fragmentation is a critical concern for nature conservation and the focus of intense debate in landscape ecology. Resolving the uncertainty around the effects of habitat fragmentation on biodiversity remains an ongoing challenge that requires the successful delineation of multiple patch-landscape interactions.
Objectives
We carried out a regional analysis on species richness of woodland mammals to determine the relative influence of structural, compositional and functional characteristics related to woodland habitat across different land-cover gradients.
Methods
We calculated the Edge-weighted Habitat Index, an area-weighted measure of functional connectivity that incorporates a mechanistic estimate of edge-effects, for interior woodland habitat. We compared its influence on mammalian species richness to that of increasing edge and patch density, landscape diversity, and a habitat-only model, in different contexts of matrix hostility across Northern England in the UK.
Results
Our results demonstrate the relevance of alternative drivers of species richness resulting from patch-landscape interactions across gradients of matrix hostility. Evidence is provided for positive and negative effects of increasing structural (edge density), functional (connected interior habitat) and compositional (landscape diversity) attributes, varying according to matrix type and intensity. Results were sensitive to dominant land-cover types in the matrix and the scale of observation.
Conclusion
This study provides new insights into fragmentation effects on biodiversity and clarifies assumptions around the relative influence of structural, compositional and functional habitat characteristics on landscape-level species richness. We highlight the presence of thresholds, related to matrix hostility, that determine alternative drivers of species richness in woodland mammals. These drivers, and related thresholds, were sensitive to the scale of observation and landscape context. Landscape decisions aimed at promoting biodiversity should consider sources of matrix hostility and homogeneity at scales relevant to ecological processes of interest.
{"title":"Land-cover gradients determine alternate drivers of mammalian species richness in fragmented landscapes","authors":"M. Dennis, J. J. Huck, C. D. Holt, P. da Conceição Bispo, E. McHenry, A. Speak, P. James","doi":"10.1007/s10980-024-01952-7","DOIUrl":"https://doi.org/10.1007/s10980-024-01952-7","url":null,"abstract":"<h3 data-test=\"abstract-sub-heading\">Context</h3><p>Understanding habitat fragmentation is a critical concern for nature conservation and the focus of intense debate in landscape ecology. Resolving the uncertainty around the effects of habitat fragmentation on biodiversity remains an ongoing challenge that requires the successful delineation of multiple patch-landscape interactions.</p><h3 data-test=\"abstract-sub-heading\">Objectives</h3><p>We carried out a regional analysis on species richness of woodland mammals to determine the relative influence of structural, compositional and functional characteristics related to woodland habitat across different land-cover gradients.</p><h3 data-test=\"abstract-sub-heading\">Methods</h3><p>We calculated the Edge-weighted Habitat Index, an area-weighted measure of functional connectivity that incorporates a mechanistic estimate of edge-effects, for interior woodland habitat. We compared its influence on mammalian species richness to that of increasing edge and patch density, landscape diversity, and a habitat-only model, in different contexts of matrix hostility across Northern England in the UK.</p><h3 data-test=\"abstract-sub-heading\">Results</h3><p>Our results demonstrate the relevance of alternative drivers of species richness resulting from patch-landscape interactions across gradients of matrix hostility. Evidence is provided for positive and negative effects of increasing structural (edge density), functional (connected interior habitat) and compositional (landscape diversity) attributes, varying according to matrix type and intensity. Results were sensitive to dominant land-cover types in the matrix and the scale of observation.</p><h3 data-test=\"abstract-sub-heading\">Conclusion</h3><p>This study provides new insights into fragmentation effects on biodiversity and clarifies assumptions around the relative influence of structural, compositional and functional habitat characteristics on landscape-level species richness. We highlight the presence of thresholds, related to matrix hostility, that determine alternative drivers of species richness in woodland mammals. These drivers, and related thresholds, were sensitive to the scale of observation and landscape context. Landscape decisions aimed at promoting biodiversity should consider sources of matrix hostility and homogeneity at scales relevant to ecological processes of interest.</p>","PeriodicalId":54745,"journal":{"name":"Landscape Ecology","volume":"1 1","pages":""},"PeriodicalIF":5.2,"publicationDate":"2024-08-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141881610","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-08-03DOI: 10.1007/s10980-024-01949-2
Alexandre Levi-Mourao, Roberto Meseguer, Filipe Madeira, José Antonio Martinez-Casasnovas, Alejandro C. Costamagna, Xavier Pons
Context
The alfalfa weevil Hypera postica Gyllenhal (Coleoptera: Curculionidae) is one of the most destructive pests of alfalfa worldwide. Both local and landscape-scale factors can significantly influence crop pests, natural enemies, and the effectiveness of biological control services, but the relative influence of these factors is unclear.
Objectives
We investigated the influence of the local variables and surrounding landscape composition and configuration on the abundance of alfalfa weevil, and on the abundance and parasitism rates of its larval parasitoids, Bathyplectes spp.
Methods
We sampled 65 commercial alfalfa fields along the Ebro Basin, Spain, over a period of 3 years, recording the field characteristics and landscape structure at three buffer radii of 250, 500 and 1000 m from the center of each field.
Results
The abundance of weevil larvae was positively associated with the field perimeter and with the uncut alfalfa surrounding the pipes of the sprinkler irrigation system, but only one configuration variable was positively correlated: the alfalfa edge density. No local characteristics or landscape structures were associated with the abundance of adult weevils. The abundance of Bathyplectes spp. adults was positively associated to local factors such as the densities of alfalfa weevils and aphids. Few landscape structure variables, such as alfalfa edge density and Simpson’s Diversity Index, had explanatory value only at 250 m buffer radius. The rate of larval parasitism was affected by local variables, such as alfalfa weevil abundance and field age.
Conclusion
Our results provide, for the first time in the Mediterranean region and Europe, evidence of the relative importance of landscape structure and local factors on the abundance of the alfalfa weevil and its larval parasitoids, Bathyplectes spp. The strongest influences were based on local characteristics.
{"title":"Local factors have a greater influence on the abundance of alfalfa weevil and its larval parasitoids than landscape complexity in heterogeneous landscapes","authors":"Alexandre Levi-Mourao, Roberto Meseguer, Filipe Madeira, José Antonio Martinez-Casasnovas, Alejandro C. Costamagna, Xavier Pons","doi":"10.1007/s10980-024-01949-2","DOIUrl":"https://doi.org/10.1007/s10980-024-01949-2","url":null,"abstract":"<h3 data-test=\"abstract-sub-heading\">Context</h3><p>The alfalfa weevil <i>Hypera postica</i> Gyllenhal (Coleoptera: Curculionidae) is one of the most destructive pests of alfalfa worldwide. Both local and landscape-scale factors can significantly influence crop pests, natural enemies, and the effectiveness of biological control services, but the relative influence of these factors is unclear.</p><h3 data-test=\"abstract-sub-heading\">Objectives</h3><p>We investigated the influence of the local variables and surrounding landscape composition and configuration on the abundance of alfalfa weevil, and on the abundance and parasitism rates of its larval parasitoids, <i>Bathyplectes</i> spp.</p><h3 data-test=\"abstract-sub-heading\">Methods</h3><p>We sampled 65 commercial alfalfa fields along the Ebro Basin, Spain, over a period of 3 years, recording the field characteristics and landscape structure at three buffer radii of 250, 500 and 1000 m from the center of each field.</p><h3 data-test=\"abstract-sub-heading\">Results</h3><p>The abundance of weevil larvae was positively associated with the field perimeter and with the uncut alfalfa surrounding the pipes of the sprinkler irrigation system, but only one configuration variable was positively correlated: the alfalfa edge density. No local characteristics or landscape structures were associated with the abundance of adult weevils. The abundance of <i>Bathyplectes</i> spp. adults was positively associated to local factors such as the densities of alfalfa weevils and aphids. Few landscape structure variables, such as alfalfa edge density and Simpson’s Diversity Index, had explanatory value only at 250 m buffer radius. The rate of larval parasitism was affected by local variables, such as alfalfa weevil abundance and field age.</p><h3 data-test=\"abstract-sub-heading\">Conclusion</h3><p>Our results provide, for the first time in the Mediterranean region and Europe, evidence of the relative importance of landscape structure and local factors on the abundance of the alfalfa weevil and its larval parasitoids, <i>Bathyplectes</i> spp. The strongest influences were based on local characteristics.</p>","PeriodicalId":54745,"journal":{"name":"Landscape Ecology","volume":"79 1","pages":""},"PeriodicalIF":5.2,"publicationDate":"2024-08-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141881455","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Sustainable development in coastal zones faces escalating flood risk in the context of climate change and urbanization, and the rapid urban growth in flood zones has been one of the key drivers. Therefore, understanding the Urban Exposure to Flooding (UEF) and its future scenarios is important in coastal zones.
Objectives
The objectives of this study were: (1) to assess the future dynamics of UEFs in China's coastal zones, and (2) to identify a sustainable way of urban planning in controlling the growth of UEFs.
Methods
Future UEFs in coastal China were assessed during 2020–2050 by combining urban expansion model, scenario analysis, and flood exposure assessment. Alternative scenarios were considered of shared socioeconomic pathways (SSPs), representative concentration pathways (RCPs), strategies of urban planning.
Results
The results show that the 1000-year flood UEFs along coastal China was expected to grow under SSP2-RCP4.5 from 9,879 km2 in 2020 to 13,424 (12,997–13,981) km2 in 2050, representing an increment of 35.88% (31.56%–41.52%). Alternatively, the strategy of sustainable development planning could reduce the newly added UEF by 16.98% (15.63%–18.67%) in a 1000-year flood scenario.
Conclusions
The findings proved that the ways of urban growth matters in terms of affecting food exposure and risk and flood risk should be incorporated into urban planning for a sustainable landscape. The study could offer methodology and support for sustainable development strategies in reducing future urban flood risk.
{"title":"Sustainable urban planning to control flood exposure in the coastal zones of China","authors":"Yijing Wu, Jingwei Li, Haoyuan Wu, Yongqiang Duan, Hanru Shen, Shiqiang Du","doi":"10.1007/s10980-024-01951-8","DOIUrl":"https://doi.org/10.1007/s10980-024-01951-8","url":null,"abstract":"<h3 data-test=\"abstract-sub-heading\">Context</h3><p>Sustainable development in coastal zones faces escalating flood risk in the context of climate change and urbanization, and the rapid urban growth in flood zones has been one of the key drivers. Therefore, understanding the Urban Exposure to Flooding (UEF) and its future scenarios is important in coastal zones.</p><h3 data-test=\"abstract-sub-heading\">Objectives</h3><p>The objectives of this study were: (1) to assess the future dynamics of UEFs in China's coastal zones, and (2) to identify a sustainable way of urban planning in controlling the growth of UEFs.</p><h3 data-test=\"abstract-sub-heading\">Methods</h3><p>Future UEFs in coastal China were assessed during 2020–2050 by combining urban expansion model, scenario analysis, and flood exposure assessment. Alternative scenarios were considered of shared socioeconomic pathways (SSPs), representative concentration pathways (RCPs), strategies of urban planning.</p><h3 data-test=\"abstract-sub-heading\">Results</h3><p>The results show that the 1000-year flood UEFs along coastal China was expected to grow under SSP2-RCP4.5 from 9,879 km<sup>2</sup> in 2020 to 13,424 (12,997–13,981) km<sup>2</sup> in 2050, representing an increment of 35.88% (31.56%–41.52%). Alternatively, the strategy of sustainable development planning could reduce the newly added UEF by 16.98% (15.63%–18.67%) in a 1000-year flood scenario.</p><h3 data-test=\"abstract-sub-heading\">Conclusions</h3><p>The findings proved that the ways of urban growth matters in terms of affecting food exposure and risk and flood risk should be incorporated into urban planning for a sustainable landscape. The study could offer methodology and support for sustainable development strategies in reducing future urban flood risk.</p>","PeriodicalId":54745,"journal":{"name":"Landscape Ecology","volume":"22 2 1","pages":""},"PeriodicalIF":5.2,"publicationDate":"2024-08-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141881606","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-07-30DOI: 10.1007/s10980-024-01930-z
Pablo Yair Huais
Context
Typical landscape-scale studies comprise the delimitation of landscapes followed by the calculation of one or more landscape metrics. Performing an analysis at multiple spatial scales is often required, occasionally followed by the selection of a particular scale according to the response variable of interest. More complex research goals might require a thorough inspection of landscapes, plus a selection of landscapes that would fulfill certain conditions regarding their landscape metrics. These tasks can usually be programmatically challenging, especially if multiple spatial scales are being analyzed.
Objectives
The R package multilandr builds on several spatial-oriented R packages to provide a toolbox to develop and inspect multi-scale landscapes based on simple spatial inputs.
Methods and results
The package delivers functions to calculate metrics within a multi-scale framework. Also, it provides several utility functions to visualize correlations between metrics, filter landscapes that fulfill certain predefined conditions or select a wide-range gradient of landscapes for a given metric, among other useful tasks. This paper introduces the functionality of multilandr through a step-by-step instruction guide and case studies.
Conclusions
The R package multilandr provides a set of functions to facilitate typical methodological workflow of landscape-scale studies in the R environment, for both beginner and expert R users. It provides the functionality to perform a systematic filtering and selection of landscapes according to a given experimental design. The package is especially programmed to develop multi-scale designs but is also useful for the calculation of metrics of a set of landscapes from any GIS-related project.
背景典型的景观尺度研究包括景观划界,然后计算一个或多个景观指标。通常需要在多个空间尺度上进行分析,有时还需要根据感兴趣的响应变量选择特定的尺度。更复杂的研究目标可能需要对景观进行彻底检查,并选择符合景观指标特定条件的景观。这些任务通常在编程上具有挑战性,尤其是在分析多个空间尺度的情况下。方法与结果该 R 软件包提供了在多尺度框架内计算指标的函数。此外,它还提供了几个实用功能,用于可视化度量之间的相关性、过滤满足某些预定义条件的景观,或为给定度量选择大范围的景观梯度,以及其他有用的任务。本文通过分步指导和案例研究介绍了 multilandr 的功能。 结论 R 软件包 multilandr 提供了一系列功能,以方便 R 环境中景观尺度研究的典型方法工作流程,适用于 R 初学者和专家用户。它提供了根据给定的实验设计对景观进行系统过滤和选择的功能。该软件包尤其适用于开发多尺度设计,但也可用于计算来自任何 GIS 相关项目的一组景观的指标。
{"title":"multilandr: an R package for multi-scale landscape analysis","authors":"Pablo Yair Huais","doi":"10.1007/s10980-024-01930-z","DOIUrl":"https://doi.org/10.1007/s10980-024-01930-z","url":null,"abstract":"<h3 data-test=\"abstract-sub-heading\">Context</h3><p>Typical landscape-scale studies comprise the delimitation of landscapes followed by the calculation of one or more landscape metrics. Performing an analysis at multiple spatial scales is often required, occasionally followed by the selection of a particular scale according to the response variable of interest. More complex research goals might require a thorough inspection of landscapes, plus a selection of landscapes that would fulfill certain conditions regarding their landscape metrics. These tasks can usually be programmatically challenging, especially if multiple spatial scales are being analyzed.</p><h3 data-test=\"abstract-sub-heading\">Objectives</h3><p>The R package <i>multilandr</i> builds on several spatial-oriented R packages to provide a toolbox to develop and inspect multi-scale landscapes based on simple spatial inputs.</p><h3 data-test=\"abstract-sub-heading\">Methods and results</h3><p>The package delivers functions to calculate metrics within a multi-scale framework. Also, it provides several utility functions to visualize correlations between metrics, filter landscapes that fulfill certain predefined conditions or select a wide-range gradient of landscapes for a given metric, among other useful tasks. This paper introduces the functionality of <i>multilandr</i> through a step-by-step instruction guide and case studies.</p><h3 data-test=\"abstract-sub-heading\">Conclusions</h3><p>The R package <i>multilandr</i> provides a set of functions to facilitate typical methodological workflow of landscape-scale studies in the R environment, for both beginner and expert R users. It provides the functionality to perform a systematic filtering and selection of landscapes according to a given experimental design. The package is especially programmed to develop multi-scale designs but is also useful for the calculation of metrics of a set of landscapes from any GIS-related project.</p>","PeriodicalId":54745,"journal":{"name":"Landscape Ecology","volume":"77 1","pages":""},"PeriodicalIF":5.2,"publicationDate":"2024-07-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141870328","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-07-30DOI: 10.1007/s10980-024-01935-8
Nicholas L. James, Graeme S. Cumming
Context
As complementary terrestrial and aquatic habitats are pulled apart by environmental change, animals will have to adjust their behaviours to successfully track their fundamental niches. We introduce a novel example of how climate change impacts can drive separation between complementary foraging and breeding habitats in seabirds.
Objectives
We evaluated how Black Noddies (Anous minutus) modified their movement behaviour across the seascape to access complementary habitat types during a period of local food scarcity; and whether this influenced their breeding success.
Methods
We quantified characteristics of foraging behaviour relating to energy consumption (time, distance and area covered) over four breeding seasons for Black Noddies (A. minutus) and compared favourable years (2019, 2020 and 2021) to an unfavourable year (2022). We also quantified and compared chick health and survival rates over the same period.
Results
In 2022, severe reduction in local food abundance on Heron Island led breeding Black Noddies to forage further by an order of magnitude, utilizing a remote wooded island (Bushy Islet) as an overnight roosting location. This was a novel and completely unexpected response to the altered environmental conditions. At the same time, 2022 saw significant increases in chick mortality and decreases in chick health compared to other years.
Conclusions
We show how a growing mismatch between nesting, roosting, and foraging sites pushed individuals in a breeding tropical seabird population to extend their foraging range by an order of magnitude, with direct negative consequences for juveniles. Our findings highlight the need to explicitly consider habitat complementation in land- and seascape conservation initiatives and planning.
{"title":"Climate change may impact habitat complementation and cause disassociation for mobile species","authors":"Nicholas L. James, Graeme S. Cumming","doi":"10.1007/s10980-024-01935-8","DOIUrl":"https://doi.org/10.1007/s10980-024-01935-8","url":null,"abstract":"<h3 data-test=\"abstract-sub-heading\">Context</h3><p>As complementary terrestrial and aquatic habitats are pulled apart by environmental change, animals will have to adjust their behaviours to successfully track their fundamental niches. We introduce a novel example of how climate change impacts can drive separation between complementary foraging and breeding habitats in seabirds.</p><h3 data-test=\"abstract-sub-heading\">Objectives</h3><p>We evaluated how Black Noddies (<i>Anous minutus</i>) modified their movement behaviour across the seascape to access complementary habitat types during a period of local food scarcity; and whether this influenced their breeding success.</p><h3 data-test=\"abstract-sub-heading\">Methods</h3><p>We quantified characteristics of foraging behaviour relating to energy consumption (time, distance and area covered) over four breeding seasons for Black Noddies (<i>A. minutus</i>) and compared favourable years (2019, 2020 and 2021) to an unfavourable year (2022). We also quantified and compared chick health and survival rates over the same period.</p><h3 data-test=\"abstract-sub-heading\">Results</h3><p>In 2022, severe reduction in local food abundance on Heron Island led breeding Black Noddies to forage further by an order of magnitude, utilizing a remote wooded island (Bushy Islet) as an overnight roosting location. This was a novel and completely unexpected response to the altered environmental conditions. At the same time, 2022 saw significant increases in chick mortality and decreases in chick health compared to other years.</p><h3 data-test=\"abstract-sub-heading\">Conclusions</h3><p>We show how a growing mismatch between nesting, roosting, and foraging sites pushed individuals in a breeding tropical seabird population to extend their foraging range by an order of magnitude, with direct negative consequences for juveniles. Our findings highlight the need to explicitly consider habitat complementation in land- and seascape conservation initiatives and planning.</p>","PeriodicalId":54745,"journal":{"name":"Landscape Ecology","volume":"3 1","pages":""},"PeriodicalIF":5.2,"publicationDate":"2024-07-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141870326","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-07-29DOI: 10.1007/s10980-024-01927-8
Dylan M. Westaway, Chris J. Jolly, David M. Watson, Tim S. Jessop, Damian R. Michael, Grant D. Linley, Anna Aristova, Ben Holmes, Jodi N. Price, Euan G. Ritchie, William L. Geary, Anne Buchan, Ella Loeffler, Dale G. Nimmo
Context
Human disturbance has transformed ecosystems globally, yet studies of the ecological impact of landscape modification are often confounded. Non-random patterns of land clearing cause differing vegetation types and soil productivity between fragments in modified landscapes and reference areas—like national parks—with which they are compared.
Objectives
We sought to explore the influence of land modification on herpetofauna and small mammal communities using multiple biodiversity measures—species richness and diversity, individual species abundance, and community composition. We also aimed to investigate the role of traits such as diet, habitat breadth, and litter size in moderating species responses to land modification.
Methods
We established 100 sampling sites to survey herpetofauna and small mammals in 11 fragments in an agricultural landscape compared to 11 ecologically equivalent ‘pseudo-fragments’ in a nearby national park in south-eastern Australia. We selected pairs of fragments and pseudo-fragments of the same size and vegetation type, and used identical survey methods to sample pairs simultaneously, thereby controlling for numerous confounding factors, such as differing vegetation type, weather, and survey effort.
Results
Species richness and diversity were similar between fragments and pseudo-fragments. Despite this, we found community composition differed markedly—driven by the varying responses of individual species—indicating a shift in fauna communities associated with land modification. Fossorial habit, omnivorous diet, and broad habitat requirements led to higher abundance in fragments whilst arboreality, carnivorous diet, and narrow habitat requirements led to higher abundance in pseudo-fragments.
Conclusions
Although fragments hold similar numbers of species to continuous areas, they contain distinct and novel communities, and sustain high abundances of some species. These diverse communities are dominated by native species, including threatened species, and their distinctive composition is shaped by traits conducive to persistence amidst land modification. These novel communities may provide a reservoir of resilience in the face of environmental change and should be viewed as complementary to conservation areas.
{"title":"Fragments maintain similar herpetofauna and small mammal richness and diversity to continuous habitat, but community composition and traits differ","authors":"Dylan M. Westaway, Chris J. Jolly, David M. Watson, Tim S. Jessop, Damian R. Michael, Grant D. Linley, Anna Aristova, Ben Holmes, Jodi N. Price, Euan G. Ritchie, William L. Geary, Anne Buchan, Ella Loeffler, Dale G. Nimmo","doi":"10.1007/s10980-024-01927-8","DOIUrl":"https://doi.org/10.1007/s10980-024-01927-8","url":null,"abstract":"<h3 data-test=\"abstract-sub-heading\">Context</h3><p>Human disturbance has transformed ecosystems globally, yet studies of the ecological impact of landscape modification are often confounded. Non-random patterns of land clearing cause differing vegetation types and soil productivity between fragments in modified landscapes and reference areas—like national parks—with which they are compared.</p><h3 data-test=\"abstract-sub-heading\">Objectives</h3><p>We sought to explore the influence of land modification on herpetofauna and small mammal communities using multiple biodiversity measures—species richness and diversity, individual species abundance, and community composition. We also aimed to investigate the role of traits such as diet, habitat breadth, and litter size in moderating species responses to land modification.</p><h3 data-test=\"abstract-sub-heading\">Methods</h3><p>We established 100 sampling sites to survey herpetofauna and small mammals in 11 fragments in an agricultural landscape compared to 11 ecologically equivalent ‘pseudo-fragments’ in a nearby national park in south-eastern Australia. We selected pairs of fragments and pseudo-fragments of the same size and vegetation type, and used identical survey methods to sample pairs simultaneously, thereby controlling for numerous confounding factors, such as differing vegetation type, weather, and survey effort.</p><h3 data-test=\"abstract-sub-heading\">Results</h3><p>Species richness and diversity were similar between fragments and pseudo-fragments. Despite this, we found community composition differed markedly—driven by the varying responses of individual species—indicating a shift in fauna communities associated with land modification. Fossorial habit, omnivorous diet, and broad habitat requirements led to higher abundance in fragments whilst arboreality, carnivorous diet, and narrow habitat requirements led to higher abundance in pseudo-fragments.</p><h3 data-test=\"abstract-sub-heading\">Conclusions</h3><p>Although fragments hold similar numbers of species to continuous areas, they contain distinct and novel communities, and sustain high abundances of some species. These diverse communities are dominated by native species, including threatened species, and their distinctive composition is shaped by traits conducive to persistence amidst land modification. These novel communities may provide a reservoir of resilience in the face of environmental change and should be viewed as complementary to conservation areas.</p>","PeriodicalId":54745,"journal":{"name":"Landscape Ecology","volume":"65 1","pages":""},"PeriodicalIF":5.2,"publicationDate":"2024-07-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141870325","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-07-29DOI: 10.1007/s10980-024-01939-4
Frederik Gerits, Bert Reubens, Lies Messely, Kris Verheyen
Context
Reinforcement of agrobiodiversity in peri-urban areas requires a landscape lens. Relationships between land use composition and indicators of ecosystem services can depend on weather conditions and differ between regions.
Objectives
In this study we present new empirical data on relationships between landscape composition and indicators of regulating and provisioning agroecosystem services. Furthermore, we check if these data are consistent between two different ecoregions and different years.
Methods
We apply an innovative methodology in a research landscape in the province of Antwerp (Flanders, Belgium) in 2021 with 1 m²-garden as phytometers along a landscape compositional gradient. Landscape composition at different scales is used as explanatory variable for microclimate variation, arthropod activity, leaf herbivory and crop yield in the 1 m²-gardens. Results are compared to an identical experiment in another ecoregion in East Flanders in 2018, 2019.
Results
We found that the proportion of built-up areas is negatively related to local agroecosystem functioning. High-value herbaceous vegetation (e.g. extensive grasslands) promotes the activity of predators and high green vegetation buffers soil moisture and temperature variation, during dry and warm periods. Comparison between cases indicates that there is more consistency in the response of predatory invertebrates to the landscape composition than in the response of pollinators. The buffering effect of high green vegetation in the landscape increases when temperature and drought extremes occur.
Conclusions
The extent of high green vegetation can be enhanced at landscape level to maximise their ability to buffer extreme weather conditions. In peri-urban areas we should avoid further urban sprawl into the rural matrix and promote high-value herbaceous vegetation.
背景加强城郊地区的农业生物多样性需要从景观角度出发。土地利用构成与生态系统服务指标之间的关系可能取决于天气条件,并且在不同地区之间存在差异。在本研究中,我们提供了有关景观构成与农业生态系统服务调节和供应指标之间关系的新经验数据。此外,我们还检查了这些数据在两个不同的生态区和不同年份之间是否一致。方法我们在安特卫普省(比利时佛兰德斯)的一个研究景观中采用了一种创新方法,在 2021 年将 1 m² 的花园作为植物测量仪,沿着景观组成梯度进行测量。不同尺度的景观组成被用作 1 平方米花园中微气候变化、节肢动物活动、叶片食草动物和作物产量的解释变量。结果我们发现,建筑密集区的比例与当地农业生态系统的功能呈负相关。在干旱和温暖时期,高价值草本植被(如广阔的草地)可促进捕食者的活动,而高绿色植被可缓冲土壤水分和温度变化。对不同情况的比较表明,捕食性无脊椎动物对景观构成的反应比传粉昆虫的反应更为一致。当出现极端温度和干旱时,景观中高绿化植被的缓冲作用会增强。在城市周边地区,我们应避免城市进一步向农村基质扩展,并推广高价值的草本植被。
{"title":"Consistency of landscape compositional effects on microclimate, arthropods and plant performance across different years and regions","authors":"Frederik Gerits, Bert Reubens, Lies Messely, Kris Verheyen","doi":"10.1007/s10980-024-01939-4","DOIUrl":"https://doi.org/10.1007/s10980-024-01939-4","url":null,"abstract":"<h3 data-test=\"abstract-sub-heading\">Context</h3><p>Reinforcement of agrobiodiversity in peri-urban areas requires a landscape lens. Relationships between land use composition and indicators of ecosystem services can depend on weather conditions and differ between regions.</p><h3 data-test=\"abstract-sub-heading\">Objectives</h3><p>In this study we present new empirical data on relationships between landscape composition and indicators of regulating and provisioning agroecosystem services. Furthermore, we check if these data are consistent between two different ecoregions and different years.</p><h3 data-test=\"abstract-sub-heading\">Methods</h3><p>We apply an innovative methodology in a research landscape in the province of Antwerp (Flanders, Belgium) in 2021 with 1 m²-garden as phytometers along a landscape compositional gradient. Landscape composition at different scales is used as explanatory variable for microclimate variation, arthropod activity, leaf herbivory and crop yield in the 1 m²-gardens. Results are compared to an identical experiment in another ecoregion in East Flanders in 2018, 2019.</p><h3 data-test=\"abstract-sub-heading\">Results</h3><p>We found that the proportion of built-up areas is negatively related to local agroecosystem functioning. High-value herbaceous vegetation (e.g. extensive grasslands) promotes the activity of predators and high green vegetation buffers soil moisture and temperature variation, during dry and warm periods. Comparison between cases indicates that there is more consistency in the response of predatory invertebrates to the landscape composition than in the response of pollinators. The buffering effect of high green vegetation in the landscape increases when temperature and drought extremes occur.</p><h3 data-test=\"abstract-sub-heading\">Conclusions</h3><p>The extent of high green vegetation can be enhanced at landscape level to maximise their ability to buffer extreme weather conditions. In peri-urban areas we should avoid further urban sprawl into the rural matrix and promote high-value herbaceous vegetation.</p>","PeriodicalId":54745,"journal":{"name":"Landscape Ecology","volume":"28 1","pages":""},"PeriodicalIF":5.2,"publicationDate":"2024-07-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141870327","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-07-29DOI: 10.1007/s10980-024-01931-y
Nancy F. Sonti, Matthew E. Baker, John J. Lagrosa, Michael Allman, J. Morgan Grove, Michelle P. Katoski
Context
Land use history of urban forests impacts present-day soil structure, vegetation, and ecosystem function, yet is rarely documented in a way accessible to planners and land managers.
Objectives
To (1) summarize historical land cover of present-day forest patches in Baltimore, MD, USA across land ownership categories and (2) determine whether social-ecological characteristics vary by historical land cover trajectory.
Methods
Using land cover classification derived from 1927 and 1953 aerial imagery, we summarized present-day forest cover by three land cover sequence classes: (1) Persistent forest that has remained forested since 1927, (2) Successional forest previously cleared for non-forest vegetation (including agriculture) that has since reforested, or (3) Converted forest that has regrown on previously developed areas. We then assessed present-day ownership and average canopy height of forest patches by land cover sequence class.
Results
More than half of Baltimore City’s forest has persisted since at least 1927, 72% since 1953. About 30% has succeeded from non-forest vegetation during the past century, while 15% has reverted from previous development. A large proportion of forest converted from previous development is currently privately owned, whereas persistent and successional forest are more likely municipally-owned. Successional forest occurred on larger average parcels with the fewest number of distinct property owners per patch. Average tree canopy height was significantly greater in patches of persistent forest (mean = 18.1 m) compared to canopy height in successional and converted forest patches (16.6 m and 16.9 m, respectively).
Conclusions
Historical context is often absent from urban landscape ecology but provides information that can inform management approaches and conservation priorities with limited resources for sustaining urban natural resources. Using historical landscape analysis, urban forest patches could be further prioritized for protection by their age class and associated ecosystem characteristics.
{"title":"Shaping Baltimore’s urban forests: past insights for present-day ecology","authors":"Nancy F. Sonti, Matthew E. Baker, John J. Lagrosa, Michael Allman, J. Morgan Grove, Michelle P. Katoski","doi":"10.1007/s10980-024-01931-y","DOIUrl":"https://doi.org/10.1007/s10980-024-01931-y","url":null,"abstract":"<h3 data-test=\"abstract-sub-heading\">Context</h3><p>Land use history of urban forests impacts present-day soil structure, vegetation, and ecosystem function, yet is rarely documented in a way accessible to planners and land managers.</p><h3 data-test=\"abstract-sub-heading\">Objectives</h3><p>To (1) summarize historical land cover of present-day forest patches in Baltimore, MD, USA across land ownership categories and (2) determine whether social-ecological characteristics vary by historical land cover trajectory.</p><h3 data-test=\"abstract-sub-heading\">Methods</h3><p>Using land cover classification derived from 1927 and 1953 aerial imagery, we summarized present-day forest cover by three land cover sequence classes: (1) Persistent forest that has remained forested since 1927, (2) Successional forest previously cleared for non-forest vegetation (including agriculture) that has since reforested, or (3) Converted forest that has regrown on previously developed areas. We then assessed present-day ownership and average canopy height of forest patches by land cover sequence class.</p><h3 data-test=\"abstract-sub-heading\">Results</h3><p>More than half of Baltimore City’s forest has persisted since at least 1927, 72% since 1953. About 30% has succeeded from non-forest vegetation during the past century, while 15% has reverted from previous development. A large proportion of forest converted from previous development is currently privately owned, whereas persistent and successional forest are more likely municipally-owned. Successional forest occurred on larger average parcels with the fewest number of distinct property owners per patch. Average tree canopy height was significantly greater in patches of persistent forest (mean = 18.1 m) compared to canopy height in successional and converted forest patches (16.6 m and 16.9 m, respectively).</p><h3 data-test=\"abstract-sub-heading\">Conclusions</h3><p>Historical context is often absent from urban landscape ecology but provides information that can inform management approaches and conservation priorities with limited resources for sustaining urban natural resources. Using historical landscape analysis, urban forest patches could be further prioritized for protection by their age class and associated ecosystem characteristics.</p>","PeriodicalId":54745,"journal":{"name":"Landscape Ecology","volume":"8 1","pages":""},"PeriodicalIF":5.2,"publicationDate":"2024-07-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141870331","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}