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A Revision of the Didelphid Marsupial Genus Marmosa Part 4. Species of the Alstoni Group (Subgenus Micoureus) 双翅目有袋动物属的修订(四)。小鲵群种(小鲵亚属)
IF 1.5 3区 环境科学与生态学 Q3 BIODIVERSITY CONSERVATION Pub Date : 2021-12-08 DOI: 10.1206/3983.1
R. Voss, Thomas C. Giarla, S. Jansa
ABSTRACT In this report, the fourth of a revisionary series on mouse opossums (Marmosa), we treat the members of a monophyletic group of trans-Andean taxa that include M. alstoni (Allen, 1900); M. nicaraguae Thomas, 1905; and M. adleri, a new species. Although cytochrome b sequence divergence values among these species are substantially lower than distances commonly observed among other congeners, members of the Alstoni Group are strikingly unlike one another in morphological traits. We conjecture that rapid phenotypic divergence accompanied the Pleistocene radiation of an ancestral lineage that entered Central America as a late participant in the Great American Biotic Interchange. Additional undescribed species of the Alstoni Group seem likely to exist based on the evidence at hand, and we emphasize the need for renewed collecting in Central America, which has long been neglected by mammalian biodiversity researchers.
在这篇关于鼠负鼠(Marmosa)修订系列的第四篇报告中,我们研究了跨安第斯分类群中一个单系群的成员,包括M. alstoni (Allen, 1900);尼加拉瓜·托马斯,1905;和新种M. adleri。尽管这些物种之间的细胞色素b序列差异值明显低于其他同系物之间的距离,但Alstoni群的成员在形态特征上却明显不同。我们推测,快速的表型分化伴随着一个祖先谱系的更新世辐射,该谱系作为大美洲生物交换的后期参与者进入中美洲。根据现有的证据,Alstoni群的其他未被描述的物种似乎可能存在,我们强调有必要在中美洲重新收集,这一领域长期被哺乳动物生物多样性研究人员所忽视。
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引用次数: 3
A New Dromaeosaurid (Dinosauria: Coelurosauria) from Khulsan, Central Mongolia 文章题目蒙古中部呼尔山一新龙目(恐龙纲:颈龙目)
IF 1.5 3区 环境科学与生态学 Q3 BIODIVERSITY CONSERVATION Pub Date : 2021-11-08 DOI: 10.1206/3982.1
James G. Napoli, Alexander Ruebenstahl, Bhart‐Anjan S. Bhullar, A. Turner, M. Norell
ABSTRACT Dromaeosaurid theropods represent a rare but important clade of nonavialan dinosaurs. Their close evolutionary relationship to modern birds has placed them at the center of paleontological research for the last several decades. Herein we describe a new species of dromaeosaurid—Kuru kulla, gen. et sp. nov.—based on a partial skeleton from the Late Cretaceous Khulsan locality (Barun Goyot Formation) of Mongolia. This species is diagnosed by several autapomorphies within Dromaeosauridae, including a sharp groove anterior and ventral to the narial fossa on the premaxilla, a posterolaterally directed hornlet on the posterodorsal process of the lacrimal, a deep surangular bearing two surangular foramina, and anteriorly displaced pleurocoels on the dorsal centra. The taxon is further characterized by a unique combination of characters, including a mediolaterally narrow metatarsal II, serrations on both carinae of the dentary teeth, hyposphenes that are widely separated but joined by a web of bone, and a lacrimal with a poorly developed boss on its lateral surface. Phylogenetic analysis finds Kuru kulla to be the sister taxon of Adasaurus mongoliensis, from the slightly later Nemegt Formation, with which it is united by three synapomorphies: a posterior surangular foramen that is ∼30% the depth of the surangular, absence of a fourth trochanter of the femur, and thoracic centra that are markedly longer than their midpoint widths. The recognition of this taxon has important implications for common assumptions of Mesozoic terrestrial ecosystem structure and adds new data to a recently recognized pattern in dromaeosaurid faunal composition among Late Cretaceous localities in Mongolia and Inner Mongolia (Nei Mongol Autonomous Region, China).
摘要:Dromaeosauroid兽脚亚目恐龙是一个罕见但重要的非北欧恐龙分支。在过去的几十年里,它们与现代鸟类的密切进化关系使它们成为古生物学研究的中心。在此,我们根据蒙古晚白垩世Khulsan地区(Barun Goyot组)的部分骨骼,描述了一个新的dromaeosaurid物种——Kuru kulla,gen.et sp.nov。该物种是由Dromaeosauridae科的几种自体变形来诊断的,包括上颌前鼻孔窝前和腹侧的一个锐槽,泪腺后突上的一个后外侧角,一个带有两个腓肠孔的深腓肠骨,以及中央背侧向前移位的胸膜腔。该分类单元的进一步特征是一个独特的特征组合,包括内侧狭窄的跖骨II、两颗齿状牙齿的隆突上的锯齿、广泛分离但由骨网连接的尿道下裂,以及侧面凸起发育不良的泪腺。系统发育分析发现,Kuru kulla是蒙古阿达龙的姐妹分类单元,来自稍晚的涅美格特组,它与涅美格特组由三个突触形态结合在一起:一个约为腓肠肌深度30%的后腓肠肌孔,没有第四个股骨粗隆,以及明显长于中点宽度的胸中央。该分类单元的识别对中生代陆地生态系统结构的常见假设具有重要意义,并为最近在蒙古和内蒙古(中国内蒙古自治区)晚白垩世地区发现的龙类动物群组成模式增加了新的数据。
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引用次数: 5
A New Troglomorphic, Leaf-litter Scorpion from Ecuador (Troglotayosicidae: Troglotayosicus) 厄瓜多尔一新种穴居凋落叶蝎(穴居蝗科:穴居蝗科)
IF 1.5 3区 环境科学与生态学 Q3 BIODIVERSITY CONSERVATION Pub Date : 2021-11-03 DOI: 10.1206/3981.1
Ricardo Botero-Trujillo, J. Ochoa, L. Prendini
ABSTRACT For several decades, Troglotayosicus Lourenço, 1981, remained an enigmatic, monotypic scorpion genus believed to be troglobitic. The discovery and description in recent years of several endogean species of the genus, inhabiting the leaf litter of tropical rainforests in Colombia and Ecuador, advanced knowledge about these scorpions. The known distribution of Troglotayosicus was considerably expanded along the Andes, and it was demonstrated that, despite the absence of median ocelli, the genus is composed primarily of species that inhabit leaf litter. In the present study, Troglotayosicus ballvei, sp. nov., is described from Sacha Huagra Lodge, adjacent to Archidona Municipality, in Napo Province, Ecuador, raising the number of Troglotayosicus species to six, three each in Colombia and Ecuador. An updated map of the known distribution of the genus is presented.
几十年来,Troglotayosicus louren(1981)一直是一个神秘的单型蝎子属,被认为是穴居人。近年来,在哥伦比亚和厄瓜多尔热带雨林的落叶层中发现和描述了几种内源的蝎属物种,提高了对这些蝎子的认识。已知的穴居人沿安第斯山脉的分布有相当大的扩展,并且表明,尽管没有中间的ocelli,该属主要由栖息在凋落叶中的物种组成。在本研究中,来自厄瓜多尔纳波省阿奇多纳市附近的Sacha Huagra Lodge的穴居人(Troglotayosicus ballvei, sp. nov.)被描述,将穴居人的种类增加到6种,哥伦比亚和厄瓜多尔各3种。一个更新的地图已知分布的属提出。
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引用次数: 0
Two New Phenacogrammus (Characoidei; Alestidae) from the Ndzaa River (Mfimi-Lukenie Basin) of Central Africa, Democratic Republic of Congo 刚果民主共和国中部非洲Ndzaa河(Mfimi-Lukenie盆地)的两个新Phenacogrammus(Characoidei;Alestidae)
IF 1.5 3区 环境科学与生态学 Q3 BIODIVERSITY CONSERVATION Pub Date : 2021-11-03 DOI: 10.1206/3980.1
M. Stiassny, S. E. Alter, R. J. Monsembula Iyaba, T. Liyandja
ABSTRACT Two new Phenacogrammus are described from the Ndzaa River, a small left-bank tributary of the Mfimi-Lukenie River in the central Congo basin. They share with P. deheyni, a congener endemic to the Cuvette Centrale to the north, a prominent anterior expansion of the first pleural rib; a feature interpreted here as a synapomorphy diagnostic for this species assemblage. The two new species are readily differentiated from P. deheyni based on differences in pigmentation patterning, a lower number of scales in longitudinal series (26–28 vs. 29–33) and a longer head length (m. 24.9% SL vs. 21.7 and 23.2% SL). Phenacogrammus flexus, new species, is distinguished from all congeners in the possession of 6 (vs. 7) supraneural bones, and a characteristic zigzag pattern of black pigmentation along and below the midline extending from the posterior border of the opercle to the base of the caudal peduncle. While no unambiguous morphological autapomorphies have been located to diagnose P. concolor, new species, it is nonetheless readily distinguished from all congeners, except P. deheyni and P. flexus, in the possession of a prominent anterior expansion of the first pleural rib. It differs from both P. deheyni and P. flexus in the absence of a dominant pigmentation patterning over the flanks and caudal peduncle. Additionally, it differs from P. flexus in a shallower body depth (m. 24.9% vs. 27.0% SL) and in the possession of 7 (vs. 6) supraneurals. The three species exhibit extensive divergence in mt-COI sequence (P. flexus vs. P. concolor 10.2%–11%; P. flexus vs deheyni 12.9%–13.5%; P. concolor vs. deheyni 11.3%–12.9%). Furthermore, analysis of shape variation utilizing geometric morphometrics indicates that each species differs significantly in body shape.
刚果盆地中部姆菲米-卢肯尼河左岸的一条小支流恩扎河中发现了两种新的Phenacogrammus。它们与P. deheyni相同,P. deheyni是北部中央小丘特有的同系物,第一胸膜肋骨的突出的前扩张;这个特征在这里被解释为这个物种组合的突触形态诊断。这两个新种很容易与deheyni区分,基于色素沉着模式的差异,纵向系列鳞片数量较少(26-28比29-33)和较长的头长(m. 24.9% SL比21.7和23.2% SL)。新种屈斑蝶(Phenacogrammus flexus)与所有同系物的区别在于,它拥有6块(vs. 7块)神经膜上骨,中线及中线以下有典型的锯齿状黑色色素沉着,从肢柄后缘一直延伸到尾柄基部。虽然没有明确的形态学自异形被定位来诊断P. concolor,新种,尽管如此,它很容易与所有同属物种区分开来,除了P. deheyni和P. flexus,在第一胸膜肋骨有一个突出的前扩张。它不同于这两个P. deheyni和P. flexus在没有显性色素沉着模式在侧翼和尾端花序梗。此外,它与屈曲假单胞菌在较浅的体深(24.9% vs. 27.0% SL)和拥有7个(vs. 6个)上膈肌方面有所不同。三个物种在mt-COI序列上表现出广泛的差异(P. flexus vs. concolor 10.2%-11%;弯曲假单胞菌vs deheyni 12.9%-13.5%;P. concolor vs. deheyni 11.3%-12.9%)。此外,利用几何形态计量学对形状变化进行分析表明,每个物种在体型上存在显著差异。
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引用次数: 3
A New Species of Histiotus Gervais, 1856 (Chiroptera, Vespertilionidae), from the Pacific Coast of Northern Peru 1856年秘鲁北部太平洋沿岸野田鼠一新种(翼翅目,野田鼠科)
IF 1.5 3区 环境科学与生态学 Q3 BIODIVERSITY CONSERVATION Pub Date : 2021-10-13 DOI: 10.1206/3979.1
P. Velazco, F. Almeida, Vinícius C. Cláudio, A. Giménez, N. Giannini
ABSTRACT The Pacific coastal desert of Peru harbors a unique bat fauna, including narrowly endemic taxa adapted to arid environments. This region was also the setting where several pre-Incan civilizations flourished. The Moche culture (100–850 CE) was one of those, with a rich and diverse material culture that included strikingly realistic ceramic representations of the regional flora and fauna. In particular, one Mochica pottery vessel is in the form of a bat that, based on external characteristics (large pinnae and tragus, pinnae connected by high band of membrane across the forehead, and lack of noseleaf), clearly represents an individual of the vespertilionid genus Histiotus. The morphological characteristics observed in this vessel, in addition to the area of influence of the Moche culture, suggests that this vessel depicts a species previously unknown to science that we describe here as new on the basis of two specimens obtained in 2012 in the Peruvian department of Piura. Our new species, Histiotus mochica, can be distinguished from other congeners by having unicolored dorsal fur, medial lobes of pinnae greater than 9.5 mm wide, and a well-developed (>4.3 mm high) transverse band of skin connecting the pinnae. Cytochrome b sequence data indicate that the new species is sister to H. humboldti from the Andes of Colombia and northern Ecuador. The new species is a medium-sized Histiotus that clusters with H. laephotis, H. velatus, and with small specimens of H. montanus in our multivariate analyses. With the description of H. mochica, the diversity of the genus increases to 11 species. We provide a key based on external characters of all known species of Histiotus.
秘鲁太平洋沿岸沙漠拥有独特的蝙蝠动物群,包括适应干旱环境的狭窄特有分类群。这个地区也是几个前印加文明繁荣的地方。莫切文化(公元100-850年)就是其中之一,它拥有丰富多样的物质文化,其中包括对该地区动植物的惊人逼真的陶瓷表现。特别值得一提的是,一件莫奇卡陶制容器是蝙蝠的形状,根据其外部特征(大耳廓和耳屏,耳廓由横跨前额的高带膜连接,没有鼻叶),显然代表了一个蝙蝠属的个体。在这个容器中观察到的形态特征,加上莫切文化的影响区域,表明这个容器描绘了一个以前不为科学所知的物种,我们根据2012年在秘鲁皮乌拉省获得的两个标本在这里描述为新物种。我们的新种——摩奇卡组鸟(Histiotus mochica),可以从其他同类中区分出来,因为它有单色的背毛,耳廓的内侧裂片大于9.5毫米宽,以及连接耳廓的发育良好(约4.3毫米高)的横向皮肤带。细胞色素b序列数据表明,这一新物种是来自哥伦比亚安第斯山脉和厄瓜多尔北部的洪堡蒂人的姐妹物种。在我们的多变量分析中,新发现的种是一种中等大小的麻蝇,它与H. laephotis、H. velatus和H. montanus的小标本聚集在一起。随着麻苣苔属的描述,麻苣苔属的多样性增加到11种。我们提供了一个基于所有已知种的史提乌属的外部特征的钥匙。
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引用次数: 6
Description of a New Species of Rariphotic Parapercis (Perciformes: Pinguipedidae) from the Solomon Islands 文章标题所罗门群岛羽蝗类一新种记述(尾形目:羽蝗科)
IF 1.5 3区 环境科学与生态学 Q3 BIODIVERSITY CONSERVATION Pub Date : 2021-09-30 DOI: 10.1206/3978.1
J. Sparks, Nicholas Chaloux, Robert C. Schelly, D. F. Gruber, Tate S. Sparks, Brennan T. Phillips
ABSTRACT A new species belonging to the pinguipedid genus Parapercis is described herein from a single specimen collected via a remotely operated vehicle (ROV) from rariphotic depths in the Western Province of the Solomon Islands. Parapercis rota, new species, is readily distinguished from all other congeners by a unique pigmentation pattern comprising four large, rounded, orangish-olive saddles dorsally on the flank, each with a distinct, large, dorsomedial white spot completely enclosed within the saddles, plus a fifth saddle on the caudal peduncle with only a small white dorsomedial dot; 10 discrete broad, dark orangish-olive oval vertical bars below the lateral midline; a single row of dark spots on the soft dorsal fin; caudal fin lined dorsally and ventrally with stripes of yellowish-olive pigmentation extending the length of the fin; and two prominent dark brown to black spots at the caudal-fin base. ROV-based collecting systems are a promising and relatively affordable technology for studying ichthyological diversity on deeper reef habitats, particularly those beyond the reach of technical SCUBA. The discovery and description of P. rota adds to the growing number of Parapercis species that are known to occur in mesophotic and deeper waters.
摘要本文描述了一个属于平足目Parapercis属的新种,该新种是通过遥控潜水器(ROV)从所罗门群岛西部省的稀有深处采集的单个标本。副percis rota是一种新物种,其独特的色素沉着模式很容易与所有其他同类物种区分开来,包括四个大的、圆形的、橙色的橄榄鞍,每个鞍背都有一个明显的、大的、完全包围在鞍内的背内侧白点,加上尾梗上只有一个白色背内侧小点的第五个鞍;侧中线下方的10个离散的宽的深橙色橄榄椭圆形垂直条;软背鳍上的一排深色斑点;尾鳍背侧和腹侧排列有黄橄榄色的条纹,延长了鳍的长度;尾鳍基部有两个突出的深棕色至黑色斑点。基于ROV的收集系统是一种很有前途且相对负担得起的技术,用于研究更深的珊瑚礁栖息地的鱼类多样性,特别是那些技术SCUBA无法覆盖的栖息地。P.rota的发现和描述增加了已知出现在中生和更深水域的Parapercis物种的数量。
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引用次数: 0
A Revision of the Genus Hermacha Simon, 1889 (Mygalomorphae: Entypesidae), in Southern Africa with Revalidation of Hermachola Hewitt, 1915, and Brachytheliscus Pocock, 1902 Hermacha Simon属的修订,1889年(Mygalomorphae:Entypsidae),在南部非洲,Hermachola Hewitt的重新验证,1915年,和Brachyliscus Pocock,1902年
IF 1.5 3区 环境科学与生态学 Q3 BIODIVERSITY CONSERVATION Pub Date : 2021-09-02 DOI: 10.1206/3977.1
Duniesky Ríos-Tamayo, I. Engelbrecht, P. Goloboff
ABSTRACT The southern African species of the mygalomorph spider genus Hermacha Simon, 1889, are revised. Eight species are redescribed: H. brevicauda Purcell, 1903; H. caudata Simon, 1889; H. evanescens Purcell, 1903; H. fulva Tucker, 1917; H. lanata Purcell, 1902; H. nigrispinosa Tucker, 1917; H. sericea Purcell, 1902; and H. tuckeri Raven, 1985. The female of H. sericea and the male of H. evanescens are described for the first time. Three new species are described: H. septemtrionalis, sp. nov., H. maraisae, sp. nov., and H. montana, sp. nov. On the basis of their genital morphology H. curvipes Purcell, 1902, and H. nigra Tucker, 1917, are considered incertae sedis. Pionothele capensis Zonstein, 2016, was found to be conspecific with H. brevicauda and is synonymized. The genera Brachytheliscus Pocock, 1902, and Hermachola Hewitt, 1915, are revalidated and redescribed. Hermacha capensis (Ausserer, 1871) and H. crudeni Hewitt, 1913, are transferred to Hermachola. Hermachola crudeni (Hewitt, 1913), originally described from a female, and Hermachola grahami Hewitt, 1915, originally described from a male, were found to be conspecific and synonymized. A new species, Hermachola lyleae, sp. nov., is also described. New morphological characters for the diagnoses of these genera and a dichotomous key for all species considered here are provided. Known distributions are mapped and, where available, ecological data are included. With the exception of H. caudata and H. mazoena Hewitt, 1915, all species are endemic to South Africa, but further survey work in neighboring countries is needed. This work substantially improves the taxonomy of this group of spiders and provides a foundation for further investigation of the diversity and relationships of species within the region.
摘要对1889年发现的南部非洲斑蛛属Hermacha Simon进行了修订。重新描述了八个物种:H.brevicoda Purcell,1903;H.尾状西蒙,1889年;H.evanescens Purcell,1903年;H.富尔瓦·塔克,1917年;H.拉纳塔·普塞尔,1902年;H.nigrispinosa Tucker,1917年;H.塞尔西亚-珀塞尔,1902年;和H.tuckeri Raven,1985年。首次描述了蚕桑的雌性和伊凡森的雄性。描述了三个新种:H.septemtrionalis,sp.nov.,H.maraisae,sp.nova.和H.montana,sp.nov。根据它们的生殖器形态,H.curvipes Purcell,1902和H.nigra Tucker,1917被认为是景天科植物。Pioneothele capensis Zonstein,2016,被发现与H.brevicoda同源,是同义词。Brachythescus Pocock属(1902年)和Hermachola Hewitt属(1915年)被重新验证和重新命名。Hermacha capensis(Ausserer,1871年)和H.crudeni Hewitt,1913年,被转移到Hermachola。Hermachola crudeni(Hewitt,1913),最初由女性描述,和Hermachola-grahami-Hewitt(1915),最初从男性描述,被发现是同种和同义的。文章还报道了一个新种,Hermachola lyleae,sp.nov。为这些属的诊断提供了新的形态学特征,并为这里考虑的所有物种提供了一个二分键。绘制了已知的分布图,并在可用的情况下包括生态数据。除了H.caudata和H.mazoena Hewitt,1915年,所有物种都是南非的特有物种,但还需要在邻国进行进一步的调查工作。这项工作大大改进了这类蜘蛛的分类学,并为进一步调查该地区物种的多样性和关系奠定了基础。
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引用次数: 1
Four New Species of “Hooded Tick-Spiders” (Ricinulei, Ricinoididae) from South and Central America, with Clarification of the Identity of Cryptocellus leleupi Cooreman, 1976 中南美洲“有帽蜱蛛”四新种(蓖麻目,蓖麻科),并对leeleupi Cryptocellus的身份进行澄清,1976
IF 1.5 3区 环境科学与生态学 Q3 BIODIVERSITY CONSERVATION Pub Date : 2021-08-25 DOI: 10.1206/3976.1
Ricardo Botero-Trujillo, L. S. Carvalho, E. Flórez D., L. Prendini
ABSTRACT The Ricinulei Thorell, 1876, or “hooded tick-spiders,” are among the least studied arachnid orders. Knowledge of ricinuleid diversity has been slow to accumulate because these arachnids are underrepresented in biological collections. Despite an increase in the pace of new species descriptions in recent decades, the species richness of the order probably remains vastly underestimated. Large areas in some of the world's most biodiverse countries are without a single record for the order, hence new records invariably turn out to be new species. The present contribution describes four new species of the mostly South American genus Cryptocellus Westwood, 1874: Cryptocellus canutama, sp. nov., and Cryptocellus jamari, sp. nov., from Brazil; Cryptocellus islacolon, sp. nov., from Panama; and Cryptocellus macagual, sp. nov., from Colombia. Additionally, a new diagnosis and description are provided for Cryptocellus leleupi Cooreman, 1976, long considered a nomen dubium. The known locality records of the five species and their putative relatives are mapped. The present contribution raises the number of Cryptocellus species to 45 and the number of extant species of Ricinulei to 101.
Ricinulei Thorell, 1876,或“帽状蜱蛛”,是研究最少的蛛形纲之一。关于蓖麻毒素多样性的知识积累缓慢,因为这些蛛形纲动物在生物收藏中代表性不足。尽管近几十年来新物种的描述速度有所加快,但该目的物种丰富度可能仍被大大低估。在世界上生物多样性最丰富的一些国家的大片地区,该目没有任何记录,因此新记录必然是新物种。本文描述了主要来自南美洲的Cryptocellus Westwood属的4个新种:来自巴西的Cryptocellus canutama, sp. nov.和Cryptocellus jamari, sp. nov.;Cryptocellus islacolon, sp. nov.,产自巴拿马;和来自哥伦比亚的Cryptocellus macagual, sp. nov.。此外,本文还对长期以来被认为是一种常见的细菌Cryptocellus leeleupi Cooreman, 1976提供了一种新的诊断和描述。绘制了五种已知的地点记录及其推测的亲缘关系。目前的贡献使隐虫属的种数增加到45种,蓖麻属的现存种数增加到101种。
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引用次数: 0
The Bacterial Diversity Lurking in Protist Cell Cultures Protist细胞培养中潜伏的细菌多样性
IF 1.5 3区 环境科学与生态学 Q3 BIODIVERSITY CONSERVATION Pub Date : 2021-08-25 DOI: 10.1206/3975.1
Ameris Aponte, Yangtsho Gyaltshen, J. Burns, Aaron A. Heiss, Eunsoo Kim, Sally D. Warring
Laboratory cultures of heterotrophic protists are often xenic, meaning that the culture contains more than one microbial organism. In this study, we analyzed genome-assembly data from cultures of four marine protist flagellates—the marine malawimonad Imasa heleensis , the undescribed mantamonad strain SRT-306, the discobid Ophirina amphinema , and the cryptist Palpitomonas bilix —specifically to search for genomes of cocultured bacteria. As no external bacteria have been added to the protist stock cultures, it is probable that the cocultured bacteria came from the original water samples from which the protists were isolated. At least some of these bacteria are consumed as a food source by the protists, all of which are obligate hetero-trophs. From four separate metagenomic de novo assemblies for these mixed cultures, we identified 28 scaffolds, which BUSCO analyses suggest represent complete or near-complete bacterial genomes. These scaffolds range in length from 3,139,436 to 6,090,282 bp and encode 2873 to 5666 genes. Only eight of the 28 scaffolds corresponded to entries in the NCBI genome database, meaning that 20 of these scaffolds represent genomes from putatively novel bacterial species. Our findings highlight that data like these, which are often discarded or overlooked, can be a source of novel genomes and/or species.
异养原生生物的实验室培养物通常是异种的,这意味着培养物包含不止一种微生物。在这项研究中,我们分析了四种海洋原生鞭毛虫——海洋malawimonad Imasa heleensis,未描述的mantamonad菌株SRT-306,盘状Ophirina amphinema和隐状Palpitomonas bilix——培养的基因组组装数据,专门寻找共培养细菌的基因组。由于原生生物的原始培养物中没有添加外部细菌,因此共培养的细菌很可能来自分离原生生物的原始水样。这些细菌中至少有一部分被原生生物作为食物来源消耗,所有这些原生生物都是专性异养生物。从这些混合培养物的四个独立的宏基因组从头组装中,我们确定了28个支架,BUSCO分析表明它们代表了完整或接近完整的细菌基因组。这些支架的长度在3,139,436至6,090,282 bp之间,编码2873至5666个基因。28个支架中只有8个与NCBI基因组数据库中的条目相对应,这意味着其中20个支架代表了假定的新细菌物种的基因组。我们的研究结果强调,这些经常被丢弃或忽视的数据可以成为新基因组和/或物种的来源。
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引用次数: 3
Terrestrial Isopods from Spanish Amber (Crustacea: Oniscidea): Insights into the Cretaceous Soil Biota 来自西班牙琥珀的陆生等足类动物(甲壳纲:洋葱总科):白垩纪土壤生物群的见解
IF 1.5 3区 环境科学与生态学 Q3 BIODIVERSITY CONSERVATION Pub Date : 2021-08-06 DOI: 10.1206/3974.1
Alba Sánchez-García, E. Peñalver, X. Delclòs, M. Engel
ABSTRACT Terrestrial isopods (Crustacea: Oniscidea) are a model group for studying the colonization of land. However, their fossil record is remarkably scarce and restricted to amber inclusions, and therefore amber deposits represent valuable windows to their past diversity and morphology. Here we present a new collection of 11 terrestrial isopod specimens preserved in Albian-aged amber from the Peñacerrada I outcrop, northern Spain, which collectively represent the most thoroughly documented fauna of Mesozoic Oniscidea. The three new genera and species identified belong to three of five major groups of the Oniscidea: Eoligiiscus tarraconensis, new genus and species (Ligiidae), Autrigoniscus resinicola, new genus and species (Synocheta: Trichoniscidae), and Heraclitus helenae, new genus and species (Crinocheta: Detonidae?). These taxa significantly expand the known fossil record of Oniscidea and demonstrate that considerable cladogenesis had already transpired by the Albian. The assemblage represents the earliest-known diversification of Oniscidea, extending direct evidence of terrestrialization in the group back to the late Early Cretaceous. These new taxa exhibit some characteristics that may inform hypotheses relating to general patterns of terrestrial isopod evolution. A discussion is provided about different aspects of the paleoecology and biology of the fossils compared to the Recent fauna. The new species indicate that Cretaceous isopods were a group of considerable adaptive diversity, exhibiting innovations analogous to what Recent isopods would exhibit 105 million years later.
陆生等足类(甲壳纲:尾足纲)是研究陆地定殖的典型类群。然而,它们的化石记录非常稀少,而且仅限于琥珀包裹体,因此琥珀矿床是了解它们过去多样性和形态的宝贵窗口。在这里,我们展示了西班牙北部Peñacerrada I露头中保存在阿尔及利亚时代琥珀中的11个陆生等足类标本,这些标本共同代表了中生代蛇足类动物群的最完整记录。经鉴定的3个新属、新种隶属于蠓亚5个主要类群中的3个,分别是:蠓亚科新属、新种、新属、新种、新属、新种、新属、新种。这些分类群大大扩展了已知的蛇尾亚纲化石记录,并证明了相当大的枝进化已经在阿尔比亚发生。该组合代表了已知最早的蛇尾纲多样化,将该群体陆地化的直接证据追溯到早白垩纪晚期。这些新的分类群表现出一些特征,可以为有关陆地等足类动物进化的一般模式的假设提供信息。讨论了这些化石与近代动物群的古生态学和生物学的不同方面。这些新物种表明,白垩纪等足类动物是一个具有相当适应性多样性的群体,它们所表现出的创新类似于1.05亿年后的现代等足类动物所表现出的创新。
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引用次数: 2
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American Museum Novitates
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