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A Helpful Bug in the System: Gut Microbes and Their Positive Impact on Portal Pressure Modulation 系统中的有益错误:肠道微生物及其对门静脉压力调节的积极影响。
IF 7.1 1区 医学 Q1 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2024-01-01 DOI: 10.1016/j.jcmgh.2024.101399
Moira B. Hilscher
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引用次数: 0
IGF2BP1/IMP1 Deletion Enhances a Facultative Stem Cell State via Regulation of MAP1LC3B IGF2BP1/IMP1缺失可通过调节MAP1LC3B增强面干细胞状态
IF 7.2 1区 医学 Q1 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2024-01-01 DOI: 10.1016/j.jcmgh.2023.12.001
Louis R. Parham , Patrick A. Williams , Kay Katada , Shaneice K. Nettleford , Priya Chatterji , Kofi K. Acheampong , Charles H. Danan , Xianghui Ma , Lauren A. Simon , Kaitlyn E. Naughton , Rei Mizuno , Tatiana Karakasheva , Emily A. McMillan , Kelly A. Whelan , Donita C. Brady , Sydney M. Shaffer , Kathryn E. Hamilton

Background & Aims

The intestinal epithelium interfaces with a diverse milieu of luminal contents while maintaining robust digestive and barrier functions. Facultative intestinal stem cells are cells that survive tissue injury and divide to re-establish the epithelium. Prior studies have shown autophagic state as functional marker of facultative intestinal stem cells, but regulatory mechanisms are not known. The current study evaluated a post-transcriptional regulation of autophagy as an important factor for facultative stem cell state and tissue regeneration.

Methods

We evaluated stem cell composition, autophagic vesicle content, organoid formation, and in vivo regeneration in mice with intestinal epithelial deletion of the RNA binding protein IGF2 messenger RNA binding protein 1 (IMP1). The contribution of autophagy to resulting in vitro and in vivo phenotypes was evaluated via genetic inactivation of Atg7. Molecular analyses of IMP1 modulation of autophagy at the protein and transcript localization levels were performed using IMP1 mutant studies and single-molecule fluorescent in situ hybridization.

Results

Epithelial Imp1 deletion reduced leucine rich repeat containing G protein coupled receptor 5 cell frequency but enhanced both organoid formation efficiency and in vivo regeneration after irradiation. We confirmed prior studies showing increased autophagy with IMP1 deletion. Deletion of Atg7 reversed the enhanced regeneration observed with Imp1 deletion. IMP1 deletion or mutation of IMP1 phosphorylation sites enhanced expression of essential autophagy protein microtubule-associated protein 1 light chain 3β. Furthermore, immunofluorescence imaging coupled with single-molecule fluorescent in situ hybridization showed IMP1 colocalization with MAP1LC3B transcripts at homeostasis. Stress induction led to decreased colocalization.

Conclusions

Depletion of IMP1 enhances autophagy, which promotes intestinal regeneration via expansion of facultative intestinal stem cells.

背景& 目的肠道上皮与多种多样的管腔内容物相互作用,同时保持强大的消化和屏障功能。肠道干细胞是在组织损伤后存活下来并分裂以重建上皮的细胞。先前的研究表明,自噬状态是面肠干细胞的功能标志,但其调控机制尚不清楚。本研究评估了转录后对自噬的调控,认为自噬是面性干细胞状态和组织再生的一个重要因素。通过Atg7的遗传失活评估了自噬对体外和体内表型的贡献。利用 IMP1 突变体研究和单分子荧光原位杂交 (smFISH) 对 IMP1 在蛋白质和转录本定位水平上对自噬的调节作用进行了分子分析。我们证实了之前的研究表明,IMP1缺失会增加自噬。Atg7的缺失逆转了Imp1缺失所观察到的再生能力增强。IMP1缺失或IMP1磷酸化位点突变增强了必需的自噬蛋白微管相关蛋白1轻链3β(MAP1LC3B)的表达。此外,免疫荧光成像和 smFISH 显示了 IMP1 与 MAP1LC3B 转录本在平衡状态下的共定位。结论消耗 IMP1 可增强自噬,从而通过扩增肠道干细胞促进肠道再生。
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引用次数: 0
The Recurrent Liver MAN2A1-FER Oncoprotein Lacks Kinase Activity: Implications for the Use of Tyrosine Kinase Inhibitors 复发性肝脏 MAN2A1-FER 癌症蛋白缺乏激酶活性:对使用酪氨酸激酶抑制剂的影响。
IF 7.2 1区 医学 Q1 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2024-01-01 DOI: 10.1016/j.jcmgh.2023.12.007
Mathieu Desaunay, Edwige Voisset, Sebastien Letard, Philippe Roche, Paulo De Sepulveda
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引用次数: 0
Genetic Variation Between Small Bowel and Colon-Predominant Crohn's Disease 小肠型克罗恩病与结肠型克罗恩病之间的遗传变异。
IF 7.2 1区 医学 Q1 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2024-01-01 DOI: 10.1016/j.jcmgh.2024.02.010
Halee Patel, R. Alan Harris, Justin H. Qian, Numan Oezguen, Ashleigh Watson, Reka G. Szigeti, Stanley Cho, Wenly Ruan, Savini Britto, Antone Opekun, Geoffrey Preidis, Richard Kellermayer
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引用次数: 0
Actinomyces odontolyticus: From Carries to Colorectal Cancer 奥氏放线菌:从携带者到大肠癌
IF 7.2 1区 医学 Q1 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2024-01-01 DOI: 10.1016/j.jcmgh.2024.02.009
Keith A. Breau
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引用次数: 0
Trailblazing TRAIL Therapy: Illuminating Pathways for Cholangiocarcinoma Treatment 开创性的 TRAIL 疗法:照亮胆管癌治疗之路。
IF 7.2 1区 医学 Q1 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2024-01-01 DOI: 10.1016/j.jcmgh.2024.02.008
Sungjin Ko
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引用次数: 0
Interindividual Variation in Gut Nitrergic Neuron Density Is Regulated By GDNF Levels and ETV1 肠道硝酸神经元密度的个体间差异受 GDNF 水平和 ETV1 的调节。
IF 7.1 1区 医学 Q1 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2024-01-01 DOI: 10.1016/j.jcmgh.2024.101405
Heikki T. Virtanen , Peyman Choopanian , L. Lauriina Porokuokka , Richard Forsgård , Daniel R. Garton , Soophie Olfat , Riitta Korpela , Mehdi Mirzaie , Jaan-Olle Andressoo

Background & Aims

The size and function of the enteric nervous system (ENS) can vary substantially between individuals. Because ENS function is involved in the etiology of a growing number of common human diseases, understanding mechanisms that regulate ENS variation is important.

Methods

We analyzed RNAseq data from 41 normal adult human colon biopsies and single-cell RNA-seq data from human and mouse developing gut. To establish cause-consequence relationship we used alleles in mice that allow levels change of the candidate effector molecule in the comparable range to human samples. We used siRNA and primary neuronal cultures to define downstream molecular events and characterized gut functional changes in mice where molecular phenotypes paralleled findings in humans.

Results

We found that glial cell line–derived neurotrophic factor (GDNF) levels in the human colon vary about 5-fold and correlate strongly with nitrergic marker expression. In mice, we defined that GDNF levels are regulated via its 3’ untranslated region (3’ UTR) in the gastrointestinal tract and observed similar correlation between GDNF levels and nitrergic lineage development. We identified miR-9 and miR-133 as evolutionarily conserved candidates for negative regulation of GDNF expression in the gastrointestinal tract. Functionally, an increase in inhibitory nitrergic innervation results in an increase in gastrointestinal tract transit time, stool size, and water content accompanied with modestly reduced epithelial barrier function. Mechanistically, we found that GDNF levels regulate nitrergic lineage development via induction of transcription factor ETV1, corroborated by single-cell gene expression data in human and mouse developing enteric neurons.

Conclusions

Our results reveal how normal variation in GDNF levels influence ENS size, composition, and gut function, suggesting a mechanism for well-known interindividual variation among those parameters.
背景与目的:不同个体的肠道神经系统(ENS)的大小和功能会有很大差异。由于 ENS 功能与越来越多的人类常见疾病的病因有关,因此了解调控 ENS 变异的机制非常重要:我们分析了来自 41 例正常成人结肠活检组织的 RNAseq 数据,以及来自人类和小鼠发育中肠道的单细胞 RNAseq 数据。为了确定因果关系,我们利用了小鼠的等位基因,这些等位基因允许候选效应分子的水平在与人类样本相当的范围内发生变化。我们利用 siRNA 和原代神经元培养来确定下游分子事件,并描述了小鼠肠道功能变化的特征,其中的分子表型与人类的研究结果一致:结果:我们发现,人类结肠中的 GDNF 水平变化约为 5 倍,并且与硝酸神经元标记表达密切相关。在小鼠中,我们确定 GDNF 水平是通过其在消化道中的 3' 非翻译区(3' UTR)调节的,并观察到 GDNF 水平与能硝细胞系发育之间存在类似的相关性。我们发现,miR-9 和 miR-133 是消化道中负性调控 GDNF 表达的进化保守候选基因。在功能上,抑制性硝酸神经支配的增加会导致消化道转运时间、粪便体积和含水量的增加,同时上皮屏障功能也会适度降低。从机理上讲,我们发现 GDNF 水平通过诱导转录因子 ETV1 来调节硝能神经细胞系的发育,人和小鼠发育中的肠神经元的单细胞基因表达数据证实了这一点:我们的研究结果揭示了 GDNF 水平的正常变化如何影响 ENS 的大小、组成和肠道功能,并为这些参数之间众所周知的个体差异提出了一种机制。
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引用次数: 0
“The Good, the Bad, and the Ugly” – About Diverse Phenotypes of Hepatic Stellate Cells in the Liver "好、坏、丑"--关于肝脏中肝星状细胞的不同表型。
IF 7.2 1区 医学 Q1 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2024-01-01 DOI: 10.1016/j.jcmgh.2024.01.002
Alexandra Bogomolova , Asha Balakrishnan , Michael Ott , Amar Deep Sharma

Hepatic stellate cells (HSCs) and their activated derivatives, often referred to as myofibroblasts (MFs), play a key role in progression of chronic liver injuries leading to fibrosis, cirrhosis, and hepatocellular carcinoma. Until recently, MFs were considered a homogenous cell type majorly due to lack of techniques that allow complex molecular studies at a single-cell resolution. Recent technical advancements in genetic lineage-tracing models as well as the exponential growth of studies with single-cell transcriptome and proteome analyses have uncovered hidden heterogeneities among the HSC and MF populations in healthy states as well as chronic liver injuries at the various stages of tissue deformation. The identification of different phenotypes along the HSC/MF axis, which either maintain essential liver functions (“good” HSCs), emerge during fibrosis (“bad” HSCs), or even promote hepatocellular carcinoma (“ugly” HSCs), may lay the foundation for targeting a particular MF phenotype as potential treatment for chronic liver injuries.

肝星状细胞(HSC)及其活化衍生物(通常称为肌成纤维细胞(MF))在慢性肝损伤导致肝纤维化、肝硬化和肝细胞癌(HCC)的过程中起着关键作用。直到最近,肌成纤维细胞仍被认为是一种同源细胞类型,这主要是由于缺乏能以单细胞分辨率进行复杂分子研究的技术。最近,遗传系谱追踪模型的技术进步以及单细胞转录组和蛋白质组分析研究的迅猛发展,揭示了健康状态下造血干细胞和中性粒细胞群体之间隐藏的异质性,以及慢性肝损伤组织变形的不同阶段。造血干细胞/间充质干细胞轴上不同表型的鉴定,可以维持肝脏的基本功能("好的 "造血干细胞),在纤维化过程中出现("坏的 "造血干细胞),甚至促进 HCC("丑陋的 "造血干细胞),这为针对特定的间充质干细胞表型作为慢性肝损伤的潜在治疗方法奠定了基础。
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引用次数: 0
Noncanonical TRAIL Signaling Promotes Myeloid-Derived Suppressor Cell Abundance and Tumor Growth in Cholangiocarcinoma 非典型 TRAIL 信号促进胆管癌中髓系衍生抑制细胞的丰度和肿瘤生长
IF 7.2 1区 医学 Q1 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2024-01-01 DOI: 10.1016/j.jcmgh.2024.01.006
Emilien J. Loeuillard , Binbin Li , Hannah E. Stumpf , Jingchun Yang , Jessica R. Willhite , Jennifer L. Tomlinson , Fred Rakhshan Rohakhtar , Vernadette A. Simon , Rondell P. Graham , Rory L. Smoot , Haidong Dong , Sumera I. Ilyas

Background & Aims

Proapoptotic tumor necrosis factor–related apoptosis-inducing ligand (TRAIL) signaling as a cause of cancer cell death is a well-established mechanism. However, TRAIL-receptor (TRAIL-R) agonists have had very limited anticancer activity in human beings, challenging the concept of TRAIL as a potent anticancer agent. Herein, we aimed to define mechanisms by which TRAIL+ cancer cells can leverage noncanonical TRAIL signaling in myeloid-derived suppressor cells (MDSCs) promoting their abundance in murine cholangiocarcinoma (CCA).

Methods

Multiple immunocompetent syngeneic, orthotopic models of CCA were used. Single-cell RNA sequencing and cellular indexing of transcriptomes and epitopes by sequencing of CD45+ cells in murine tumors from the different CCA models was conducted.

Results

In multiple immunocompetent murine models of CCA, implantation of TRAIL+ murine cancer cells into Trail-r-/- mice resulted in a significant reduction in tumor volumes compared with wild-type mice. Tumor-bearing Trail-r-/- mice had a significant decrease in the abundance of MDSCs owing to attenuation of MDSC proliferation. Noncanonical TRAIL signaling with consequent nuclear factor-κB activation in MDSCs facilitated enhanced MDSC proliferation. Single-cell RNA sequencing and cellular indexing of transcriptomes and epitopes by sequencing of immune cells from murine tumors showed enrichment of a nuclear factor-κB activation signature in MDSCs. Moreover, MDSCs were resistant to TRAIL-mediated apoptosis owing to enhanced expression of cellular FLICE inhibitory protein, an inhibitor of proapoptotic TRAIL signaling. Accordingly, cellular FLICE inhibitory protein knockdown sensitized murine MDSCs to TRAIL-mediated apoptosis. Finally, cancer cell–restricted deletion of Trail significantly reduced MDSC abundance and murine tumor burden.

Conclusions

Our findings highlight the therapeutic potential of targeting TRAIL+ cancer cells for treatment of a poorly immunogenic cancer.

背景与目的:促凋亡的肿瘤坏死因子相关凋亡诱导配体(TRAIL)信号是导致癌细胞死亡的一个公认机制。然而,TRAIL-受体(TRAIL-R)激动剂在人体中的抗癌活性非常有限,这对TRAIL作为一种强效抗癌剂的概念提出了挑战。在此,我们旨在确定TRAIL+癌细胞可利用髓源性抑制细胞(MDSCs)中的非典型TRAIL信号促进其在小鼠胆管癌(CCA)中大量存在的机制:方法:使用多种免疫功能正常的 CCA 正位模型。方法:采用多种免疫能力强的同种异体小鼠模型,对不同 CCA 模型小鼠肿瘤中的 CD45+ 细胞进行单细胞 RNA 测序(scRNA-seq)和转录组细胞索引及表位测序(CITE-seq):结果:在多种免疫功能正常的 CCA 小鼠模型中,与野生型小鼠相比,将 TRAIL+ 小鼠癌细胞植入 Trail-r-/- 小鼠体内可显著减少肿瘤体积。由于MDSC增殖减弱,肿瘤携带Trail-r-/-小鼠的MDSC数量显著减少。小鼠肿瘤免疫细胞的 scRNA-seq 和 CITE-seq 结果表明,MDSCs 中 NF-κB 激活特征丰富。此外,由于细胞FLICE抑制蛋白(cFLIP)表达增强,MDSCs对TRAIL介导的细胞凋亡具有抵抗力。因此,敲除 cFLIP 可使小鼠 MDSCs 对 TRAIL 介导的细胞凋亡敏感。最后,癌细胞限制性缺失Trail可显著降低MDSC丰度和小鼠肿瘤负荷:我们的研究结果凸显了靶向TRAIL+癌细胞治疗免疫原性低的癌症的治疗潜力。
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引用次数: 0
CDKN2A-p16 Deletion and Activated KRASG12D Drive Barrett’s-Like Gland Hyperplasia-Metaplasia and Synergize in the Development of Dysplasia Precancer Lesions CDKN2A-p16 缺失和活化的 KRASG12D 驱动巴雷特氏样腺体增生-肥大,并在发育不良癌前病变的发展过程中协同作用
IF 7.2 1区 医学 Q1 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2024-01-01 DOI: 10.1016/j.jcmgh.2024.01.014
Jing Sun , Jorge L. Sepulveda , Elena V. Komissarova , Caitlin Hills , Tyler D. Seckar , Narine M. LeFevre , Hayk Simonyan , Colin Young , Gloria Su , Armando Del Portillo , Timothy C. Wang , Antonia R. Sepulveda

Background & Aims

Barrett’s esophagus is the precursor of esophageal dysplasia and esophageal adenocarcinoma. CDKN2A-p16 deletions were reported in 34%–74% of patients with Barrett’s esophagus who progressed to dysplasia and esophageal adenocarcinoma, suggesting that p16 loss may drive neoplastic progression. KRAS activation frequently occurs in esophageal adenocarcinoma and precancer lesions. LGR5+ stem cells in the squamocolumnar-junction (SCJ) of mouse stomach contribute as Barrett’s esophagus progenitors. We aimed to determine the functional effects of p16 loss and KRAS activation in Barrett’s-like metaplasia and dysplasia development.

Methods

We established mouse models with conditional knockout of CDKN2A-p16 (p16KO) and/or activated KRASG12D expression targeting SCJ LGR5+ cells in interleukin 1b transgenic mice and characterized histologic alterations (mucous-gland hyperplasia/metaplasia, inflammation, and dysplasia) in mouse SCJ. Gene expression was determined by microarray, RNA sequencing, and immunohistochemistry of SCJ tissues and cultured 3-dimensional organoids.

Results

p16KO mice exhibited increased mucous-gland hyperplasia/metaplasia versus control mice (P = .0051). Combined p16KO+KRASG12D resulted in more frequent dysplasia and higher dysplasia scores (P = .0036), with 82% of p16KO+KRASG12D mice developing high-grade dysplasia. SCJ transcriptome analysis showed several activated pathways in p16KO versus control mice (apoptosis, tumor necrosis factor-α/nuclear factor-kB, proteasome degradation, p53 signaling, MAPK, KRAS, and G1-to-S transition).

Conclusions

p16 deletion in LGR5+ cell precursors triggers increased SCJ mucous-gland hyperplasia/metaplasia. KRASG12D synergizes with p16 deletion resulting in higher grades of SCJ glandular dysplasia, mimicking Barrett’s high-grade dysplasia. These genetically modified mouse models establish a functional role of p16 and activated KRAS in the progression of Barrett’s-like lesions to dysplasia in mice, representing an in vivo model of esophageal adenocarcinoma precancer. Derived 3-dimensional organoid models further provide in vitro modeling opportunities of esophageal precancer stages.

背景& 目的巴雷特食管(BE)是食管发育不良和腺癌(EAC)的先兆。据报道,34-74%的BE患者会发展为发育不良和EAC,CDKN2A-p16缺失表明p16缺失可能会推动肿瘤的发展。KRAS活化经常发生在EAC和癌前病变中。小鼠胃鳞结膜交界处(SCJ)的LGR5+干细胞可作为BE的祖细胞。方法我们在白细胞介素-1b转基因小鼠中建立了CDKN2A-p16条件性基因敲除(p16KO)和/或KRASG12D表达激活的小鼠模型,靶向SCJ LGR5+细胞,并描述了小鼠SCJ的组织学改变(粘液腺增生/肥大、炎症和发育不良)。通过微阵列、RNAseq和免疫组化测定了SCJ组织和培养的三维器官组织的基因表达。p16KO+KRASG12D组合导致更频繁的发育不良和更高的发育不良评分,82%的p16KO+KRASG12D小鼠出现高级别发育不良(p=0.0036)。SCJ转录组分析表明,p16KO与对照小鼠相比,激活了几种通路(凋亡、TNF-α/NFkB、蛋白酶体降解、p53信号传导、MAPK、KRAS和G1-to-S转换)。KRASG12D与p16缺失协同作用,导致更高级别的SCJ腺体发育不良,模仿巴雷特氏高级别发育不良。这些转基因小鼠模型确立了 p16 和活化的 KRAS 在小鼠巴雷特样病变发展为发育不良过程中的功能性作用,代表了食管癌前病变的体内模型。衍生的三维类器官模型进一步为食管癌前病变阶段的体外建模提供了机会。
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引用次数: 0
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Cellular and Molecular Gastroenterology and Hepatology
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