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Augmenter of Liver Regeneration Crotonylation Assists in Mitochondria-ER Contact to Alleviate Hepatic Steatosis 肝脏再生促进剂(ALR)的巴豆酰化有助于线粒体-ER 接触,从而缓解肝脏脂肪变性。
IF 7.1 1区 医学 Q1 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2025-01-01 DOI: 10.1016/j.jcmgh.2024.101436
Xiao-lin Wang , Jia-hao He , Ping Xie, Yuan Wu, Ling-yue Dong, Wei An

Background & Aims

Crotonylation (Kcr), a newly identified post-translation modification (PTM), has been confirmed to be involved in diverse biological processes and human diseases as well. Metabolic dysfunction-associated steatotic liver disease (MASLD) poses a serious threat to people’s health. Augmenter of liver regeneration (ALR) is an important liver regulatory protein, and the insufficiency of ALR expression is reported to accelerate liver steatosis progression to liver fibrosis or even hepatic carcinoma (HCC). However, the connection between dysregulated ALR crotonylation and MASLD pathogenesis remains largely unknown.

Methods

Steatotic liver samples from human and Western diet (WD)-fed mice were employed for detecting Kcr levels. Mitochondrial function and mitochondria-ER interaction (MAM) relevant to ALR-Kcr modification was evaluated for hepatocyte lipid metabolism both in in vivo and in vitro experiments.

Results

Global protein crotonylation (Kcr) as well as ALR-Kcr was significantly decreased in liver samples of patients with MASLD and WD mice. Histone deacetylase1/2 (HDAC1/2) and lysine acetyltransferase 8 (KAT8) were identified responsible for regulation of ALR-Kcr, which takes place at lysine 78 (K78). The decrease of ALR crotonylation might be related to the imbalance between HDAC1/2 and KAT8 expression, inhibited its interaction with MFN2, expanding MAM distance and impairing mitochondrial lipid metabolism, and consequently deteriorating hepatic steatosis.

Conclusions

The insufficient ALR crotonylation might be a crucial mechanism contributing to the pathogenesis of MASLD. Keeping ALR crotonylation level would be beneficial for the prevention and treatment of MASLD.
背景与目的:Crotonylation (Kcr)是一种新发现的翻译后修饰(PTM),已被证实参与多种生物过程和人类疾病。代谢功能障碍相关性脂肪变性肝病(MASLD)严重威胁着人们的健康。肝再生增强蛋白(Augmenter of liver regeneration, ALR)是一种重要的肝脏调节蛋白,有报道称ALR表达不足会加速肝脏脂肪变性向肝纤维化甚至肝癌的发展。然而,失调的ALR巴豆酰化与MASLD发病机制之间的联系在很大程度上仍然未知。方法:采用人脂肪变性肝和西式饮食小鼠脂肪变性肝检测Kcr水平。在体内和体外实验中评估了与ALR-Kcr修饰相关的线粒体功能和线粒体-内质网相互作用(MAM)对肝细胞脂质代谢的影响。结果:MASLD患者和WD小鼠肝脏样品中总蛋白巴豆酰化(Global protein crotonylation, Kcr)和ALR-Kcr显著降低。组蛋白去乙酰化酶1/2 (HDAC1/2)和赖氨酸乙酰转移酶8 (KAT8)被鉴定为在赖氨酸78 (K78)位点调控ALR-Kcr。ALR crotonylation的降低可能与HADC1/2和KAT8表达失衡有关,抑制了其与MFN2的相互作用,扩大了MAM距离,损害了线粒体脂质代谢,从而恶化了肝脏脂肪变性。结论:ALR巴豆酰化不足可能是MASLD发病的重要机制。保持ALR的crotonylation水平有利于MASLD的预防和治疗。
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引用次数: 0
The Effect of FOXA3 Overexpression on Hepatocyte Differentiation and Liver Regeneration in a Fah cKO Mouse Model FOXA3过表达对Fah cKO小鼠肝细胞分化和肝再生的影响。
IF 7.1 1区 医学 Q1 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2025-01-01 DOI: 10.1016/j.jcmgh.2024.101438
Shao Li , Chupeng Ou , Jiajun Zhang , Min Zeng , Kangyan Liang , Qing Peng , Yi Gao

Background & Aims

Stimulated by injury or disease, hepatocytes can regenerate and repair liver tissues through proliferation and differentiation. Partial hepatectomy and liver transplantation are effective treatments for liver diseases. This study investigated the effect of FOXA3 on cell differentiation in HepaRG cell lines under 2- and 3-dimensional culture conditions.

Methods

Experiments were performed using a HepaRG cell line that stably overexpressed FOXA3 (RF3) and hepatocyte-specific functions. Moreover, a Fah conditional knockout mouse model (Fah cKO mice) was constructed using the CRISPR-Cas9 method and treated with RF3 spheroids for transplantation. Various molecular biology and immunostaining experiments were performed to assess liver function, hepatocyte structure, and expression levels of cell cycle–related proteins.

Results

HepaRG cells that overexpressed FOXA3 had hepatocyte-specific functions. RF3 spheroids expressed liver markers following gene and protein expression analysis. After RF3 spheroid transplantation, Fah cKO mice exhibited increased survival, reduced weight loss, normalization of liver function and hepatocyte structure, and enhanced expression of hepatocyte differentiation factors. However, the expression of cell cycle–related proteins, including p53 and p21, was decreased in vivo. Injection of an HNF4α antagonist revealed that inhibition of HNF4α effectively suppressed the regenerative capacity of the liver after RF3 spheroid transplantation, resulting in an increase in the number of p53- and p21-positive cells and a decrease in the expression levels of liver function–related genes.

Conclusions

FOXA3 plays an important role in hepatocyte function. RF3 spheroid transplantation had a therapeutic effect in the Fah cKO mouse model, improving liver function and promoting liver regeneration.
背景与目的:在损伤或疾病的刺激下,肝细胞可以通过增殖和分化来再生和修复肝组织。肝部分切除和肝移植是治疗肝脏疾病的有效方法。本研究考察了FOXA3在二维和三维培养条件下对HepaRG细胞系细胞分化的影响。方法:采用稳定过表达FOXA3 (RF3)和肝细胞特异性功能的HepaRG细胞系进行实验。此外,利用CRISPR-Cas9方法构建Fah条件敲除小鼠模型(Fah cKO小鼠),并用RF3球体处理用于移植。通过各种分子生物学和免疫染色实验来评估肝功能、肝细胞结构和细胞周期相关蛋白的表达水平。结果:过表达FOXA3的HepaRG细胞具有肝细胞特异性功能。通过基因和蛋白表达分析,RF3球体表达肝脏标志物。RF3球体移植后,Fah cKO小鼠的存活率提高,体重减轻,肝功能和肝细胞结构正常化,肝细胞分化因子表达增强。然而,细胞周期相关蛋白,包括p53和p21的表达在体内下降。注射HNF4α拮抗剂发现,抑制HNF4α可有效抑制RF3球体移植后肝脏的再生能力,导致p53-和p21阳性细胞数量增加,肝功能相关基因表达水平降低。结论:FOXA3在肝细胞功能中起重要作用。RF3球体移植在Fah cKO小鼠模型中具有改善肝功能、促进肝脏再生的治疗作用。
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引用次数: 0
Elevated Bile Acids Induce Circadian Rhythm Sleep Disorders in Chronic Liver Diseases 胆汁酸升高引起慢性肝病患者昼夜节律睡眠障碍。
IF 7.1 1区 医学 Q1 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2025-01-01 DOI: 10.1016/j.jcmgh.2024.101439
Lan Zhou , Min Yan , Qin Luo , Wen Qiu , Yu-Ru Guo , Xiao-Qing Guo , Hong-Bin Yu , Jing-Ru Huo , Yan-Lin Feng , De-Ping Wang , Teng Sun , Kai-Fang Wang , Jian-Yun Shi , Xuan Shang , Mei-Na Wu , Lin Wang , Ji-Min Cao

Background & Aims

Sleep disorders (SDs) are common in chronic liver diseases (CLDs). Some SDs arise from impaired internal clock and are, hence, circadian rhythm SDs (CRSDs). Bile acids (BAs), whose levels are increased in many CLDs, reciprocally interact with circadian rhythm. This study explores the mechanisms underlying CRSDs in CLDs and novel therapies.

Methods

We monitored the sleep of patients with CLD using actigraphic watch and established male mouse cholemia models by feeding with BA or bile duct ligation. Sleep-wake cycle and circadian rhythm were analyzed by electroencephalogram-electromyography and locomotor wheel-running experiments.

Results

Patients with CLD showed CRSD-like phenotypes including increased night activity and early awakening, which were strongly correlated with increased BA levels (ie, cholemia). CRSDs, including shortened circadian period, were recapitulated in 2 cholemic mouse models. Mechanistically, elevated BAs in the suprachiasmatic nucleus (SCN) activated BA receptor Takeda G protein-coupled receptor 5 (Tgr5), which, in turn, increased the level and phosphorylation of Period2 (Per2), a master rhythm regulator, through extracellular signal-regulated kinase (Erk) and casein kinase 1ε (CK1ε). Per2 phosphorylation inhibited its nuclear import, which would release its transcriptional inhibition and expedite the circadian cycle. Cholemia also blunted the light entrainment response and light-induced phase change of SCN mediated by the neurons expressing gastrin releasing peptide through Tgr5-Per2 axis. BA sequestrant or CK1 inhibitor reversed the CRSDs in cholemic mice by restoring Per2 distribution.

Conclusions

Cholemia is a major risk factor for CRSDs in CLDs and, hence, a promising target in future clinical study.
背景与目的:睡眠障碍(SDs)在慢性肝病(CLDs)中很常见。一些SDs是由内部时钟受损引起的,因此是昼夜节律性SDs (crsd)。胆汁酸(BAs)水平在许多CLDs中升高,与昼夜节律相互作用。本研究探讨了crsd在CLDs中的潜在机制和新的治疗方法。方法:采用活动记录仪监测CLD患者的睡眠,并通过BA喂养或胆管结扎建立雄性小鼠胆血症模型。通过脑电图-肌电图和运动轮跑实验分析睡眠-觉醒周期和昼夜节律。结果:CLD患者表现出crsd样表型,包括夜间活动增加和早醒,这与BA水平升高密切相关,即胆血症。在两种胆囊炎小鼠模型中重现了包括昼夜节律缩短的crsd。机制上,视交叉上核(SCN)中BAs的升高激活了BA受体Tgr5 (Takeda G蛋白偶联受体5),进而通过Erk(细胞外信号调节激酶)和酪蛋白激酶1ε (CK1ε)增加了主节律调节剂Period2 (Per2)的水平和磷酸化。Per2磷酸化抑制其核输入,从而释放其转录抑制并加快昼夜周期。胆血症还减弱了经Tgr5-Per2轴表达胃泌素释放肽的神经元介导的SCN的光夹带反应和光诱导相变。BA螯合剂或CK1抑制剂通过恢复Per2分布逆转了胆毒症小鼠的crsd。结论:胆血症是CLDs中crsd的主要危险因素,是未来临床研究的重要目标。
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引用次数: 0
Mouse Models for Pancreatic Ductal Adenocarcinoma are Affected by the cre-driver Used to Promote KRASG12D Activation 胰腺导管腺癌小鼠模型受用于促进 KRASG12D 激活的 cre 驱动程序的影响。
IF 7.1 1区 医学 Q1 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2025-01-01 DOI: 10.1016/j.jcmgh.2024.101428
Fatemeh Mousavi , Joyce Thompson , Justine Lau , Nur Renollet , Mickenzie B. Martin , Jake McGue , Oneeb Hassan , Timothy Frankel , Parisa Shooshtari , Christopher L. Pin , Filip Bednar

Background & Aims

The fundamental biology of pancreatic ductal adenocarcinoma has been greatly impacted by the characterization of genetically engineered mouse models that allow temporal and spatial activation of oncogenic KRAS (KRASG12D). One of the most commonly used models involves targeted insertion of a cre-recombinase into the Ptf1a gene. However, this approach disrupts the Ptf1a gene, resulting in haploinsufficiency that likely affects sensitivity to oncogenic KRAS (KRASG12D). This study aims to determine if Ptf1a haploinsufficiency affected the acinar cell response to KRASG12D before and after induction of pancreatic injury.

Methods

We performed morphological and molecular analysis of 3 genetically engineered mouse models that express a tamoxifen-inducible cre-recombinase to activate KrasG12D in acinar cells of the pancreas. The cre-recombinase was targeted to the acinar-specific transcription factor genes, Ptf1a or Mist1/Bhlha15, or expressed within a BAC-derived Elastase transgene. Histological and RNA-seq analyses were used to delineate differences between the models.

Results

Up to 2 months after tamoxifen induction of KRASG12D, morphological changes were negligible. However, induction of pancreatic injury by cerulein resulted in widespread PanIN lesions in Ptf1acreERT pancreata within 7 days and maintained for at least 5 weeks post-injury, which was not seen in the models with 2 functional Ptf1a alleles. RNA-sequencing analysis prior to injury induction suggested Ptf1acreERT and Mist1creERT mice have unique profiles of gene expression that predict a differential response to injury. Multiplex analysis of pancreatic tissue confirmed different inflammatory responses between the models.

Conclusions

These findings suggest Ptf1a haploinsufficiency in Ptf1acreERT mouse models promotes KRASG12D priming of genes for promotion of pancreatic ductal adenocarcinoma.
背景和目的:基因工程小鼠模型可在时间和空间上激活致癌基因 KRAS (KRASG12D),其特征对胰腺导管腺癌的基础生物学产生了巨大影响。最常用的模型之一是在 Ptf1a 基因中定向插入 cre 重组酶。然而,这种方法会破坏 Ptf1a 基因,导致单倍体缺陷,从而可能影响对致癌 KRAS(KRASG12D)的敏感性。本研究旨在确定在诱导胰腺损伤前后,Ptf1a单倍体缺陷是否会影响尖突细胞对KRASG12D的反应:我们对三种基因工程小鼠模型进行了形态学和分子分析,这些模型表达了他莫昔芬诱导的cre-重组酶,以激活胰腺尖突细胞中的KrasG12D。cre-重组酶靶向于胰腺尖突特异性转录因子基因Ptf1a或Mist1/Bhlha15,或在BAC衍生的弹性蛋白酶转基因中表达。组织学和RNA-seq分析用于确定不同模型之间的差异:结果:他莫昔芬诱导KRASG12D两个月后,其形态学变化可忽略不计。然而,在Ptf1acreERT胰腺中,用cerulein诱导胰腺损伤会在七天内导致广泛的PanIN病变,并在损伤后至少维持五周,这在具有两个功能性Ptf1a等位基因的模型中是看不到的。损伤诱导前的RNA-seq分析表明,Ptf1acreERT和Mist1creERT小鼠具有独特的基因表达谱,可预测对损伤的不同反应。对胰腺组织的多重分析证实了两种模型之间不同的炎症反应:这些研究结果表明,Ptf1acreERT 小鼠模型中的 Ptf1a 单倍性缺失会促进 KRASG12D 启动基因,从而诱发 PDAC。
{"title":"Mouse Models for Pancreatic Ductal Adenocarcinoma are Affected by the cre-driver Used to Promote KRASG12D Activation","authors":"Fatemeh Mousavi ,&nbsp;Joyce Thompson ,&nbsp;Justine Lau ,&nbsp;Nur Renollet ,&nbsp;Mickenzie B. Martin ,&nbsp;Jake McGue ,&nbsp;Oneeb Hassan ,&nbsp;Timothy Frankel ,&nbsp;Parisa Shooshtari ,&nbsp;Christopher L. Pin ,&nbsp;Filip Bednar","doi":"10.1016/j.jcmgh.2024.101428","DOIUrl":"10.1016/j.jcmgh.2024.101428","url":null,"abstract":"<div><h3>Background &amp; Aims</h3><div>The fundamental biology of pancreatic ductal adenocarcinoma has been greatly impacted by the characterization of genetically engineered mouse models that allow temporal and spatial activation of oncogenic KRAS (KRAS<sup>G12D</sup>). One of the most commonly used models involves targeted insertion of a <em>cre</em>-recombinase into the <em>Ptf1a</em> gene. However, this approach disrupts the <em>Ptf1a</em> gene, resulting in haploinsufficiency that likely affects sensitivity to oncogenic KRAS (KRAS<sup>G12D</sup>). This study aims to determine if <em>Ptf1a</em> haploinsufficiency affected the acinar cell response to KRAS<sup>G12D</sup> before and after induction of pancreatic injury.</div></div><div><h3>Methods</h3><div>We performed morphological and molecular analysis of 3 genetically engineered mouse models that express a tamoxifen-inducible <em>cre</em>-recombinase to activate <em>Kras</em><sup><em>G12D</em></sup> in acinar cells of the pancreas. The cre-recombinase was targeted to the acinar-specific transcription factor genes, <em>Ptf1a</em> or <em>Mist1/Bhlha15</em>, or expressed within a BAC-derived <em>Elastase</em> transgene. Histological and RNA-seq analyses were used to delineate differences between the models.</div></div><div><h3>Results</h3><div>Up to 2 months after tamoxifen induction of KRAS<sup>G12D</sup>, morphological changes were negligible. However, induction of pancreatic injury by cerulein resulted in widespread PanIN lesions in <em>Ptf1a</em><sup><em>creERT</em></sup> pancreata within 7 days and maintained for at least 5 weeks post-injury, which was not seen in the models with 2 functional <em>Ptf1a</em> alleles. RNA-sequencing analysis prior to injury induction suggested <em>Ptf1a</em><sup><em>creERT</em></sup> and <em>Mist1</em><sup><em>creERT</em></sup> mice have unique profiles of gene expression that predict a differential response to injury. Multiplex analysis of pancreatic tissue confirmed different inflammatory responses between the models.</div></div><div><h3>Conclusions</h3><div>These findings suggest <em>Ptf1a</em> haploinsufficiency in <em>Ptf1a</em><sup><em>creERT</em></sup> mouse models promotes KRAS<sup>G12D</sup> priming of genes for promotion of pancreatic ductal adenocarcinoma.</div></div>","PeriodicalId":55974,"journal":{"name":"Cellular and Molecular Gastroenterology and Hepatology","volume":"19 4","pages":"Article 101428"},"PeriodicalIF":7.1,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142640330","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Paneth Cells: Dispensable yet Irreplaceable for the Intestinal Stem Cell Niche 平板细胞:肠道干细胞生态位不可或缺但不可替代。
IF 7.1 1区 医学 Q1 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2025-01-01 DOI: 10.1016/j.jcmgh.2024.101443
Michaela Quintero , Linda C. Samuelson
Intestinal stem cells replenish the epithelium throughout life by continuously generating intestinal epithelial cell types, including absorptive enterocytes, and secretory goblet, endocrine, and Paneth cells. This process is orchestrated by a symphony of niche factors required to maintain intestinal stem cells and to direct their proliferation and differentiation. Among the various mature intestinal epithelial cell types, Paneth cells are unique in their location in the stem cell zone, directly adjacent to intestinal stem cells. Although Paneth cells were first described as an epithelial cell component of the innate immune system due to their expression of anti-microbial peptides, they have been proposed to be niche cells due to their close proximity to intestinal stem cells and expression of niche factors. However, function as a niche cell has been debated since mice lacking Paneth cells retain functional stem cells that continue to replenish the intestinal epithelium. In this review, we summarize the intestinal stem cell niche, including the Notch, Wnt, growth factor, mechanical, and metabolic niche, and discuss how Paneth cells might contribute to these various components. We also present a nuanced view of the Paneth cell as a niche cell. Although not required, Paneth cells enhance stem cell function, particularly during intestinal development and regeneration. Furthermore, we suggest that Paneth cell loss induces intestinal stem cell remodeling to adjust their niche demands.
肠道干细胞通过不断产生肠上皮细胞类型来补充上皮细胞,包括吸收型肠细胞、分泌型杯状细胞、内分泌细胞和Paneth细胞。这一过程是由维持肠道干细胞并指导其增殖和分化所需的生态位因子的交响乐精心编排的。在各种成熟肠上皮细胞类型中,Paneth细胞的独特之处在干细胞区,直接毗邻肠干细胞。虽然Paneth细胞最初被描述为先天免疫系统的上皮细胞成分,因为它们表达抗微生物肽,但由于它们与肠道干细胞和生态位因子的表达非常接近,它们被认为是生态位细胞。然而,作为一种生态位细胞的功能一直存在争议,因为缺乏Paneth细胞的小鼠保留了功能性干细胞,继续补充肠上皮。在这篇综述中,我们总结了肠道干细胞生态位,包括Notch、Wnt、生长因子、机械和代谢生态位,并讨论了Paneth细胞如何参与这些不同的组成部分。我们还提出了一个细致入微的观点,Paneth细胞作为一个生态位细胞。虽然不是必需的,但Paneth细胞增强了干细胞的功能,特别是在肠道发育和再生过程中。此外,我们认为Paneth细胞损失诱导ISC重塑以调整其生态位需求。
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引用次数: 0
Wall of Resilience: How the Intestinal Epithelium Prevents Inflammatory Onslaught in the Gut 复原之墙:肠道上皮细胞如何防止肠道炎症侵袭?
IF 7.1 1区 医学 Q1 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2025-01-01 DOI: 10.1016/j.jcmgh.2024.101423
Eva Liebing , Susanne M. Krug , Markus F. Neurath , Britta Siegmund , Christoph Becker
The intestinal epithelium forms the boundary between the intestinal immune system in the lamina propria and the outside world, the intestinal lumen, which contains a diverse array of microbial and environmental antigens. Composed of specialized cells, this epithelial monolayer has an exceptional turnover rate. Differentiated epithelial cells are released into the intestinal lumen within a few days, at the villus tip, a process that requires strict regulation. Dysfunction of the epithelial barrier increases the intestinal permeability and paves the way for luminal antigens to pass into the intestinal serosa. Stem cells at the bottom of Lieberkühn crypts provide a constant supply of mature epithelial cells. Differentiated intestinal epithelial cells exhibit a diverse array of mechanisms that enable communication with surrounding cells, fortification against microorganisms, and orchestration of nutrient absorption and hormonal balance. Furthermore, tight junctions regulate paracellular permeability properties, and their disruption can lead to an impairment of the intestinal barrier, allowing inflammation to develop or further progress. Intestinal epithelial cells provide a communication platform through which they maintain homeostasis with a spectrum of entities including immune cells, neuronal cells, and connective tissue cells. This homeostasis can be disrupted in disease, such as inflammatory bowel disease. Patients suffering from inflammatory bowel disease show an impaired gut barrier, dysregulated cellular communication, and aberrant proliferation and demise of cells. This review summarizes the individual cellular and molecular mechanisms pivotal for upholding the integrity of the intestinal epithelial barrier and shows how these can be disrupted in diseases, such as inflammatory bowel disease.
肠上皮构成了固有层中的肠道免疫系统与外部世界(肠腔)之间的边界,而外部世界则包含多种多样的微生物和环境抗原。这种上皮单层由特化细胞组成,具有极高的更替率。分化的上皮细胞会在几天内从绒毛顶端释放到肠腔中,这一过程需要严格的调节。上皮屏障功能失调会增加肠道通透性,为管腔抗原进入肠道血清铺平道路。利伯昆隐窝底部的干细胞可源源不断地提供成熟的上皮细胞。分化的 IECs 表现出多种多样的机制,能够与周围的细胞进行交流,抵御微生物的侵袭,并协调营养吸收和激素平衡。此外,紧密连接可调节细胞旁通透性,破坏紧密连接可导致肠道屏障受损,使炎症发展或进一步恶化。IECs 提供了一个交流平台,通过这个平台,IECs 与免疫细胞、神经细胞和结缔组织细胞等一系列实体保持平衡。这种平衡状态会在疾病(如炎症性肠病(IBD))中被破坏。IBD 患者的肠道屏障受损,细胞通讯失调,细胞异常增殖和消亡。本综述总结了维护肠道上皮屏障完整性的各种细胞和分子机制,并说明了这些机制在 IBD 等疾病中是如何被破坏的。
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引用次数: 0
PKMζ: A Brain Kinase Driving Metabolic Reprogramming and Myofibroblastic Differentiation PKMζ:驱动代谢重编程和肌成纤维细胞分化的脑激酶。
IF 7.1 1区 医学 Q1 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2025-01-01 DOI: 10.1016/j.jcmgh.2024.101437
Aveline Filliol
{"title":"PKMζ: A Brain Kinase Driving Metabolic Reprogramming and Myofibroblastic Differentiation","authors":"Aveline Filliol","doi":"10.1016/j.jcmgh.2024.101437","DOIUrl":"10.1016/j.jcmgh.2024.101437","url":null,"abstract":"","PeriodicalId":55974,"journal":{"name":"Cellular and Molecular Gastroenterology and Hepatology","volume":"19 3","pages":"Article 101437"},"PeriodicalIF":7.1,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142886518","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Genetic and Microbial Analysis of Invasiveness for Escherichia coli Strains Associated With Inflammatory Bowel Disease
IF 7.1 1区 医学 Q1 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2025-01-01 DOI: 10.1016/j.jcmgh.2024.101451
Jungyeon Kim , Jing Zhang , Lisa Kinch , Jinhui Shen , Sydney Field , Shahanshah Khan , Jan-Michael Klapproth , Kevin J. Forsberg , Tamia Harris-Tryon , Kim Orth , Qian Cong , Josephine Ni

Background & Aims

The adherent-invasive Escherichia coli (AIEC) pathotype is implicated in inflammatory bowel disease (IBD) pathogenesis. AIEC strains are currently defined by phenotypic measurement of their pathogenicity, including invasion of epithelial cells. This broad definition, combined with the genetic diversity of AIEC across patients with IBD, has complicated the identification of virulence determinants. We sought to quantify the invasion phenotype of clinical isolates from patients with IBD and identify the genetic basis for their invasion into epithelial cells.

Methods

A pangenome with core and accessory genes (genotype) was assembled using whole genome sequencing of 168 E coli samples isolated from 13 patients with IBD. A modified assay for invasion of epithelial cells (phenotype) was established with consideration of antibiotic resistance phenotypes. Isolate genotype was correlated to invasiveness phenotype to identify genetic factors that cosegregate with invasion.

Results

Pangenome-wide comparisons of E coli clinical isolates identified accessory genes that can cosegregate with invasion phenotype. These correlations found the acquisition of antibiotic resistance genes in clinical isolates compromised the traditional gentamicin protection assays used to quantify invasion. Therefore, an alternate assay, based on amikacin resistance, identified genes cosegregating with invasion. These genes encode an arylsulfatase, a glycoside hydrolase, and genetic islands carrying propanediol utilization and sulfoquinovose metabolism pathways.

Conclusions

This study highlights the importance of incorporating antibiotic resistance screening for invasion assays used in AIEC identification. Accurately screened invasion phenotypes identified accessory genome elements among E coli IBD isolates that correlate with their ability to invade epithelial cells. These results help explain why single genetic markers for the AIEC phylotype are challenging to identify.
{"title":"Genetic and Microbial Analysis of Invasiveness for Escherichia coli Strains Associated With Inflammatory Bowel Disease","authors":"Jungyeon Kim ,&nbsp;Jing Zhang ,&nbsp;Lisa Kinch ,&nbsp;Jinhui Shen ,&nbsp;Sydney Field ,&nbsp;Shahanshah Khan ,&nbsp;Jan-Michael Klapproth ,&nbsp;Kevin J. Forsberg ,&nbsp;Tamia Harris-Tryon ,&nbsp;Kim Orth ,&nbsp;Qian Cong ,&nbsp;Josephine Ni","doi":"10.1016/j.jcmgh.2024.101451","DOIUrl":"10.1016/j.jcmgh.2024.101451","url":null,"abstract":"<div><h3>Background &amp; Aims</h3><div>The adherent-invasive <em>Escherichia coli</em> (AIEC) pathotype is implicated in inflammatory bowel disease (IBD) pathogenesis. AIEC strains are currently defined by phenotypic measurement of their pathogenicity, including invasion of epithelial cells. This broad definition, combined with the genetic diversity of AIEC across patients with IBD, has complicated the identification of virulence determinants. We sought to quantify the invasion phenotype of clinical isolates from patients with IBD and identify the genetic basis for their invasion into epithelial cells.</div></div><div><h3>Methods</h3><div>A pangenome with core and accessory genes (genotype) was assembled using whole genome sequencing of 168 <em>E coli</em> samples isolated from 13 patients with IBD. A modified assay for invasion of epithelial cells (phenotype) was established with consideration of antibiotic resistance phenotypes. Isolate genotype was correlated to invasiveness phenotype to identify genetic factors that cosegregate with invasion.</div></div><div><h3>Results</h3><div>Pangenome-wide comparisons of <em>E coli</em> clinical isolates identified accessory genes that can cosegregate with invasion phenotype. These correlations found the acquisition of antibiotic resistance genes in clinical isolates compromised the traditional gentamicin protection assays used to quantify invasion. Therefore, an alternate assay, based on amikacin resistance, identified genes cosegregating with invasion. These genes encode an arylsulfatase, a glycoside hydrolase, and genetic islands carrying propanediol utilization and sulfoquinovose metabolism pathways.</div></div><div><h3>Conclusions</h3><div>This study highlights the importance of incorporating antibiotic resistance screening for invasion assays used in AIEC identification. Accurately screened invasion phenotypes identified accessory genome elements among <em>E coli</em> IBD isolates that correlate with their ability to invade epithelial cells. These results help explain why single genetic markers for the AIEC phylotype are challenging to identify.</div></div>","PeriodicalId":55974,"journal":{"name":"Cellular and Molecular Gastroenterology and Hepatology","volume":"19 4","pages":"Article 101451"},"PeriodicalIF":7.1,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143437535","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Cover
IF 7.1 1区 医学 Q1 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2025-01-01 DOI: 10.1016/S2352-345X(24)00212-1
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引用次数: 0
A Novel Multi-organ Male Model of Alcohol-induced Acute-on-chronic Liver Failure Reveals NET-mediated Hepatocellular Death, Which is Prevented by RIPK3 Inhibition 一项新的多器官男性酒精诱导的急性慢性肝衰竭模型显示,net介导的肝细胞死亡可通过RIPK3抑制来预防。
IF 7.1 1区 医学 Q1 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2025-01-01 DOI: 10.1016/j.jcmgh.2024.101446
Martí Ortega-Ribera , Yuan Zhuang , Mrigya Babuta , Veronika Brezani , Radhika S. Joshi , Zsuzsanna Zsengeller , Prashanth Thevkar Nagesh , Yanbo Wang , Roderick Bronson , Gyongyi Szabo

Background & Aims

Alcohol abuse is the most frequent precipitating factor of acute-on-chronic liver failure (ACLF). We aimed at developing an alcohol-induced ACLF model and dissecting its underlying molecular mechanisms.

Methods

ACLF was triggered by a single alcohol binge (5 g/kg) in a bile duct ligation (BDL) liver fibrosis murine model. Liver, kidney, and brain tissues and behavior were assessed in mice. Livers from patients with sclerosing cholangitis with and without ACLF were also evaluated.

Results

In advanced fibrosis induced by BDL, an alcohol binge induced features of ACLF, including significant liver damage, systemic inflammation (increased endotoxin and pro-inflammatory cytokines), and hepatocyte dysfunction compared with BDL alone. ACLF was associated with extrahepatic manifestations, including increased blood urea nitrogen and creatinine, impaired coagulation, and features of encephalopathy. We discovered significantly increased neutrophil count and neutrophil extracellular traps (NETs) in the liver, kidney, and brain in murine ACLF. Livers from ACLF mice showed increased pyroptosis (gasdermin D) and necroptosis (receptor-interacting protein kinase 3 [RIPK3]), when compared with BDL. In vitro, cell-free NETs were induced by alcohol and/or bile acids and triggered pyro-/necroptotic death in hepatocytes. NETosis, pyroptosis, and RIPK3 activation were validated in human livers with ACLF. Moreover, pharmacological inhibition of necroptosis with a RIPK3 inhibitor-ameliorated inflammation, NETs, and liver fibrosis, improving multi-organ ACLF pathophysiology.

Conclusions

Our novel ACLF model triggered by alcohol binge mimics key features of pathophysiology and multi-organ impairment in human ACLF. Our results indicate that neutrophil infiltration and NETs contribute to hepatocyte cell death via pyroptosis and necroptosis in ACLF, identifying RIPK3 as a potential therapeutic target.
背景和目的:酒精滥用是急性慢性肝衰竭(ACLF)最常见的诱发因素。我们旨在建立酒精诱导的ACLF模型并剖析其潜在的分子机制。方法:在胆管结扎(BDL)肝纤维化小鼠模型中,单次酒精暴饮(5g/Kg)触发ACLF。对小鼠的肝脏、肾脏和脑组织及行为进行了评估。同时对合并/不合并ACLF的硬化性胆管炎患者的肝脏进行了评估。结果:在BDL诱导的晚期纤维化中,与单独BDL相比,酒精狂欢诱导的ACLF特征包括显著的肝损伤、全身性炎症(内毒素和促炎细胞因子增加)和肝细胞功能障碍。ACLF与肝外表现相关,包括BUN和肌酐升高、凝血功能受损和脑病特征。我们发现在小鼠ACLF中,肝、肾和脑的中性粒细胞计数和中性粒细胞胞外陷阱(NET)显著增加。与BDL相比,ACLF小鼠的肝脏显示出更多的焦亡(气真皮蛋白D)和坏死(RIPK3)。在体外,酒精和/或胆汁酸诱导无细胞NETs,并引发肝细胞热/坏死性死亡。在ACLF患者肝脏中证实了NETosis、pyroptosis和RIPK3激活。此外,RIP3抑制剂对坏死下垂的药理学抑制可改善炎症、NETs和肝纤维化,改善多器官ACLF病理生理。结论:我们的新ACLF模型由酗酒引发,模拟了人类ACLF病理生理和多器官损伤的关键特征。我们的研究结果表明,中性粒细胞浸润和NETs通过ACLF中的焦亡和坏死亡参与肝细胞死亡,确定RIPK3是一个潜在的治疗靶点。
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Cellular and Molecular Gastroenterology and Hepatology
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