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Stationary peaks in a multivariable reaction–diffusion system: foliated snaking due to subcritical Turing instability 多变量反应扩散系统中的平稳峰:亚临界图灵不稳定性引起的叶状蛇形
IF 1.2 4区 数学 Q2 MATHEMATICS, APPLIED Pub Date : 2021-07-01 DOI: 10.1093/imamat/hxab029
Edgar Knobloch;Arik Yochelis
An activator–inhibitor–substrate model of side branching used in the context of pulmonary vascular and lung development is considered on the supposition that spatially localized concentrations of the activator trigger local side branching. The model consists of four coupled reaction–diffusion equations, and its steady localized solutions therefore obey an eight-dimensional spatial dynamical system in one spatial dimension (1D). Stationary localized structures within the model are found to be associated with a subcritical Turing instability and organized within a distinct type of foliated snaking bifurcation structure. This behavior is in turn associated with the presence of an exchange point in parameter space at which the complex leading spatial eigenvalues of the uniform concentration state are overtaken by a pair of real eigenvalues; this point plays the role of a Belyakov–Devaney point in this system. The primary foliated snaking structure consists of periodic spike or peak trains with $N$ identical equidistant peaks, $N=1,2,dots ,$, together with cross-links consisting of nonidentical, nonequidistant peaks. The structure is complicated by a multitude of multipulse states, some of which are also computed, and spans the parameter range from the primary Turing bifurcation all the way to the fold of the $N=1$ state. These states form a complex template from which localized physical structures develop in the transverse direction in 2D.
在假设激活剂的空间局部浓度触发局部侧分支的情况下,考虑了在肺血管和肺发育背景下使用的侧分支的激活剂-抑制剂-底物模型。该模型由四个耦合的反应-扩散方程组成,因此其稳态局部解服从一维(1D)中的八维空间动力学系统。模型中的固定局部结构被发现与亚临界图灵不稳定性有关,并被组织在一种不同类型的叶理蛇形分叉结构中。这种行为又与参数空间中交换点的存在相关联,在该交换点处,均匀集中状态的复数前导空间特征值被一对实特征值超越;这个点在这个系统中扮演着Belyakov–Devaney点的角色。初级叶片状蛇形结构由周期性尖峰或峰列组成,具有$N$相同的等距峰,$N=1,2,dots,$,以及由不相同、不等距峰组成的交联。该结构因大量的多脉冲状态而变得复杂,其中一些状态也被计算出来,并且跨越了从主要图灵分支到$N=1$状态的参数范围。这些状态形成了一个复杂的模板,局部物理结构从该模板在2D中沿横向发展。
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引用次数: 7
Curvature effects and radial homoclinic snaking 曲率效应与径向同宿蛇形
IF 1.2 4区 数学 Q2 MATHEMATICS, APPLIED Pub Date : 2021-07-01 DOI: 10.1093/imamat/hxab028
Damià Gomila;Edgar Knobloch
In this work, we revisit some general results on the dynamics of circular fronts between homogeneous states and the formation of localized structures in two dimensions (2D). We show how the bifurcation diagram of axisymmetric structures localized in radius fits within the framework of collapsed homoclinic snaking. In 2D, owing to curvature effects, the collapse of the snaking structure follows a different scaling that is determined by the so-called nucleation radius. Moreover, in the case of fronts between two symmetry-related states, the precise point in parameter space to which radial snaking collapses is not a ‘Maxwell’ point but is determined by the curvature-driven dynamics only. In this case, the snaking collapses to a ‘zero surface tension’ point. Near this point, the breaking of symmetry between the homogeneous states tilts the snaking diagram. A different scaling law is found for the collapse of the snaking curve in each case. Curvature effects on axisymmetric localized states with internal structure are also discussed, as are cellular structures separated from a homogeneous state by a circular front. While some of these results are well understood in terms of curvature-driven dynamics and front interactions, a proper mathematical description in terms of homoclinic trajectories in a radial spatial dynamics description is lacking.
在这项工作中,我们回顾了二维(2D)中均匀状态和局部结构形成之间的圆形锋面动力学的一些一般结果。我们展示了在半径局部化的轴对称结构的分岔图如何在塌缩同斜蛇形框架内拟合。在二维中,由于曲率效应,蛇形结构的坍塌遵循由所谓的成核半径决定的不同尺度。此外,在两个对称相关状态之间的前沿的情况下,径向蛇形坍缩在参数空间中的精确点不是“麦克斯韦”点,而是仅由曲率驱动的动力学决定的。在这种情况下,蛇形收缩到“零表面张力”点。在这一点附近,齐次状态之间对称性的破坏使蛇形图倾斜。在每种情况下,对于蛇形曲线的崩塌,都发现了不同的标度定律。曲率对具有内部结构的轴对称局域状态的影响也进行了讨论,同样也讨论了由圆形前缘与均匀状态分离的细胞结构。虽然其中一些结果在曲率驱动动力学和锋面相互作用方面得到了很好的理解,但在径向空间动力学描述中缺乏关于同斜轨迹的适当数学描述。
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引用次数: 3
Origin, bifurcation structure and stability of localized states in Kerr dispersive optical cavities 克尔色散光学腔中局域态的起源、分岔结构和稳定性
IF 1.2 4区 数学 Q2 MATHEMATICS, APPLIED Pub Date : 2021-07-01 DOI: 10.1093/imamat/hxab031
P Parra-Rivas;E Knobloch;L Gelens;D Gomila
Localized coherent structures can form in externally driven dispersive optical cavities with a Kerr-type non-linearity. Such systems are described by the Lugiato–Lefever (LL) equation, which supports a large variety of dynamical states. Here, we review our current knowledge of the formation, stability and bifurcation structure of localized structures in the one-dimensional LL equation. We do so by focusing on two main regimes of operation: anomalous and normal second-order dispersion. In the anomalous regime, localized patterns are organized in a homoclinic snaking scenario, which is eventually destroyed, leading to a foliated snaking bifurcation structure. In the normal regime, localized structures undergo a different type of bifurcation structure, known as collapsed snaking. The effects of third-order dispersion and various dynamical regimes are also described.
局域相干结构可以在具有克尔型非线性的外部驱动色散光学腔中形成。这类系统由Lugiato–Lefever(LL)方程描述,该方程支持多种动力学状态。在这里,我们回顾了我们目前对一维LL方程中局部结构的形成、稳定性和分岔结构的认识。我们通过关注两种主要的操作模式来做到这一点:反常和正常的二阶色散。在异常状态下,局部模式被组织成同宿蛇形场景,最终被破坏,导致叶理蛇形分叉结构。在正常状态下,局部结构经历了一种不同类型的分叉结构,称为塌陷蛇形。还描述了三阶色散和各种动力学状态的影响。
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引用次数: 13
Editorial to Homoclinic snaking at 21: in memory of Patrick Woods 21岁时对Homoclinic蛇的评论:纪念帕特里克·伍兹
IF 1.2 4区 数学 Q2 MATHEMATICS, APPLIED Pub Date : 2021-07-01 DOI: 10.1093/imamat/hxab041
Alan Champneys
This editorial serves as an extended introduction to the Special Issue. It gives the context to homoclinic snaking, especially the contribution of Patrick Woods. A very brief summary of more recent developments serves as a motivation to each paper that follows.
这篇社论是对特刊的延伸介绍。它为同性恋陷阱提供了背景,尤其是帕特里克·伍兹的贡献。对最近的事态发展作一个非常简短的总结,作为下面每一篇论文的动机。
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引用次数: 4
Localized states in coupled Cahn–Hilliard equations 耦合Cahn–Hilliard方程中的局部化态
IF 1.2 4区 数学 Q2 MATHEMATICS, APPLIED Pub Date : 2021-07-01 DOI: 10.1093/imamat/hxab026
Tobias Frohoff-Hülsmann;Uwe Thiele
The classical Cahn–Hilliard (CH) equation corresponds to a gradient dynamics model that describes phase decomposition in a binary mixture. In the spinodal region, an initially homogeneous state spontaneously decomposes via a large-scale instability into drop, hole or labyrinthine concentration patterns of a typical structure length followed by a continuously ongoing coarsening process. Here, we consider the coupled CH dynamics of two concentration fields and show that non-reciprocal (or active or non-variational) coupling may induce a small-scale (Turing) instability. At the corresponding primary bifurcation, a branch of periodically patterned steady states emerges. Furthermore, there exist localized states that consist of patterned patches coexisting with a homogeneous background. The branches of steady parity-symmetric and parity-asymmetric localized states form a slanted homoclinic snaking structure typical for systems with a conservation law. In contrast to snaking structures in systems with gradient dynamics, here, Hopf instabilities occur at a sufficiently large activity, which results in oscillating and travelling localized patterns.
经典的Cahn–Hilliard(CH)方程对应于描述二元混合物中相分解的梯度动力学模型。在旋节区,最初的均匀状态通过大规模的不稳定性自发分解为典型结构长度的液滴、空穴或迷宫式的浓度模式,随后是持续的粗化过程。在这里,我们考虑了两个浓度场的耦合CH动力学,并表明非互易(或主动或非变分)耦合可能导致小规模(图灵)不稳定性。在相应的主分叉处,出现了一个周期性模式稳态的分支。此外,存在由与均匀背景共存的图案化斑块组成的局部状态。稳态宇称对称和宇称非对称定域态的分支形成了具有守恒定律的系统典型的倾斜同宿蛇形结构。与具有梯度动力学的系统中的蛇形结构相反,在这里,Hopf不稳定性发生在足够大的活动下,这导致振荡和行进的局域模式。
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引用次数: 14
Numerical continuation of spiral waves in heteroclinic networks of cyclic dominance 循环优势异斜网中螺旋波的数值延拓
IF 1.2 4区 数学 Q2 MATHEMATICS, APPLIED Pub Date : 2021-07-01 DOI: 10.1093/imamat/hxab027
Cris R Hasan;Hinke M Osinga;Claire M Postlethwaite;Alastair M Rucklidge
Heteroclinic-induced spiral waves may arise in systems of partial differential equations that exhibit robust heteroclinic cycles between spatially uniform equilibria. Robust heteroclinic cycles arise naturally in systems with invariant subspaces, and their robustness is considered with respect to perturbations that preserve these invariances. We make use of particular symmetries in the system to formulate a relatively low-dimensional spatial two-point boundary-value problem in Fourier space that can be solved efficiently in conjunction with numerical continuation. The standard numerical set-up is formulated on an annulus with small inner radius, and Neumann boundary conditions are used on both inner and outer radial boundaries. We derive and implement alternative boundary conditions that allow for continuing the inner radius to zero and so compute spiral waves on a full disk. As our primary example, we investigate the formation of heteroclinic-induced spiral waves in a reaction–diffusion model that describes the spatiotemporal evolution of three competing populations in a 2D spatial domain—much like the Rock–Paper–Scissors game. We further illustrate the efficiency of our method with the computation of spiral waves in a larger network of cyclic dominance between five competing species, which describes the so-called Rock–Paper–Scissors–Lizard–Spock game.
异斜诱导的螺旋波可能出现在空间均匀平衡之间表现出鲁棒异斜循环的偏微分方程系统中。鲁棒异宿环在具有不变子空间的系统中自然产生,并且它们的鲁棒性考虑了保持这些不变性的摄动。我们利用系统中特定的对称性,在傅里叶空间中构造了一个相对低维的空间两点边值问题,该问题可以结合数值延拓有效地求解。标准的数值设置是建立在一个小的内半径环空上,诺伊曼边界条件被用于内外径向边界。我们推导并实现了允许内半径连续为零的替代边界条件,从而计算了整个磁盘上的螺旋波。作为我们的主要例子,我们在反应扩散模型中研究了异斜诱导的螺旋波的形成,该模型描述了三个竞争种群在二维空间域中的时空演化,就像石头剪刀布游戏一样。我们进一步说明了我们的方法的效率与螺旋波的计算在一个更大的网络循环优势之间的五个竞争物种,这描述了所谓的石头-剪刀-布-蜥蜴-斯波克游戏。
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引用次数: 1
Localized patterns and semi-strong interaction, a unifying framework for reaction–diffusion systems 局部模式和半强相互作用,反应扩散系统的统一框架
IF 1.2 4区 数学 Q2 MATHEMATICS, APPLIED Pub Date : 2021-07-01 DOI: 10.1093/imamat/hxab036
Fahad Al Saadi;Alan Champneys;Nicolas Verschueren
Systems of activator–inhibitor reaction–diffusion equations posed on an infinite line are studied using a variety of analytical and numerical methods. A canonical form is considered, which contains all known models with simple cubic autocatalytic nonlinearity and arbitrary constant and linear kinetics. Restricting attention to models that have a unique homogeneous equilibrium, this class includes the classical Schnakenberg and Brusselator models, as well as other systems proposed in the literature to model morphogenesis. Such models are known to feature Turing instability, when activator diffuses more slowly than inhibitor, leading to stable spatially periodic patterns. Conversely in the limit of small feed rates, semi-strong interaction asymptotic analysis shows existence of isolated spike-like patterns. This paper describes the broad bifurcation structures that connect these two regimes. A certain universal two-parameter state diagram is revealed in which the Turing bifurcation becomes sub-critical, leading to the onset of homoclinic snaking. This regime then morphs into the spike regime, with the outer-fold being predicted by the semi-strong asymptotics. A rescaling of parameters and field concentrations shows how this state diagram can be studied independently of the diffusion rates. Temporal dynamics is found to strongly depend on the diffusion ratio though. A Hopf bifurcation occurs along the branch of stable spikes, which is subcritical for small diffusion ratio, leading to collapse to the homogeneous state. As the diffusion ratio increases, this bifurcation typically becomes supercritical and interacts with the homoclinic snaking and also with a supercritical homogeneous Hopf bifurcation, leading to complex spatio-temporal dynamics. The details are worked out for a number of different models that fit the theory using a mixture of weakly nonlinear analysis, semi-strong asymptotics and different numerical continuation algorithms.
使用各种分析和数值方法研究了在无限线上提出的活化剂-抑制剂反应-扩散方程组。考虑了一个正则形式,它包含了所有已知的具有简单三次自催化非线性和任意常数和线性动力学的模型。将注意力限制在具有独特齐次平衡的模型上,这一类包括经典的Schnakenberg和Brusselator模型,以及文献中提出的用于建模形态发生的其他系统。已知这种模型具有图灵不稳定性,当激活剂比抑制剂扩散得更慢时,导致稳定的空间周期性模式。相反,在小进料速率的极限下,半强相互作用渐近分析表明存在孤立的尖峰状模式。本文描述了连接这两种状态的广义分叉结构。揭示了一个普遍的双参数状态图,其中图灵分岔成为亚临界,导致同宿蛇形的开始。然后,这个机制演变成尖峰机制,外部褶皱由半强渐近线预测。参数和场浓度的重新缩放显示了如何独立于扩散率来研究这种状态图。时间动力学被发现强烈依赖于扩散比。Hopf分岔发生在稳定尖峰的分支上,对于小的扩散比,这是亚临界的,导致坍塌到均匀状态。随着扩散比的增加,这种分叉通常变得超临界,并与同宿蛇形以及超临界齐次Hopf分叉相互作用,导致复杂的时空动力学。使用弱非线性分析、半强渐近性和不同的数值延拓算法的混合,为许多符合理论的不同模型计算了细节。
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引用次数: 11
Explicit superposed and forced plane wave generalized Beltrami flows 显式叠加和强迫平面波广义Beltrami流
IF 1.2 4区 数学 Q2 MATHEMATICS, APPLIED Pub Date : 2021-06-01 DOI: 10.1093/imamat/hxab015
Artur Prugger;Jens D M Rademacher
We revisit and present new linear spaces of explicit solutions to incompressible Euler and Navier–Stokes equations on ${{{mathbb{R}}}}^n$, as well as the rotating Boussinesq equations on ${{{mathbb{R}}}}^3$. We cast these solutions are superpositions of certain linear plane waves of arbitrary amplitudes that also solve the nonlinear equations by constraints on wave vectors and flow directions. For $nleqslant 3$, these are explicit examples for generalized Beltrami flows. We show that forcing terms of corresponding plane wave type yield explicit solutions by linear variation of constants. We work in Eulerian coordinates and distinguish the two situations of vanishing and of gradient nonlinear terms, where the nonlinear terms modify the pressure. The methods that we introduce to find explicit solutions in nonlinear fluid models can also be used in other equations with material derivative. Our approach offers another view on known explicit solutions of different fluid models from a plane wave perspective and provides transparent nonlinear interactions between different flow components.
我们重新审视并提出了${{mathbb{R}}}^n$上不可压缩Euler和Navier-Stokes方程的显式解的新线性空间,以及${{mathbb{R}}}^3$上的旋转Boussinesq方程。我们认为这些解是任意振幅的某些线性平面波的叠加,它们也通过波矢量和流动方向的约束来求解非线性方程。对于$nleqslant 3$,这些是广义Beltrami流的显式例子。我们证明了相应平面波类型的强迫项通过常数的线性变化产生显式解。我们在欧拉坐标系中工作,并区分消失和梯度非线性项的两种情况,其中非线性项修改了压力。我们介绍的在非线性流体模型中寻找显式解的方法也可以用于其他具有材料导数的方程。我们的方法从平面波的角度对不同流体模型的已知显式解提供了另一种观点,并提供了不同流动分量之间透明的非线性相互作用。
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引用次数: 3
Stationary and oscillatory localized patterns in ratio-dependent predator–prey systems 比例依赖捕食者-被捕食系统的平稳和振荡局部化模式
IF 1.2 4区 数学 Q2 MATHEMATICS, APPLIED Pub Date : 2021-06-01 DOI: 10.1093/imamat/hxab018
Fahad Al Saadi;Alan Champneys;Annette Worthy;Ahmed Msmali
Investigations are undertaken into simple predator–prey models with rational interaction terms in one and two spatial dimensions. Focusing on a case with linear interaction and saturation, an analysis for long domains in 1D is undertaken using ideas from spatial dynamics. In the limit that prey diffuses much more slowly than predator, the Turing bifurcation is found to be subcritical, which gives rise to localized patterns within a Pomeau pinning parameter region. Parameter regions for localized patterns and isolated spots are delineated. For a realistic range of parameters, a temporal Hopf bifurcation of the balanced equilibrium state occurs within the localized-pattern region. Detailed spectral computations and numerical simulations reveal how the Hopf bifurcation is inherited by the localized structures at nearby parameter values, giving rise to both temporally periodic and chaotic localized patterns. Simulation results in 2D confirm the onset of complex spatio-temporal patterns within the corresponding parameter regions. The generality of the results is confirmed by showing qualitatively the same bifurcation structure within a similar model with quadratic interaction and saturation. The implications for ecology are briefly discussed.
在一个和两个空间维度上,对具有合理相互作用项的简单捕食者-猎物模型进行了研究。针对线性相互作用和饱和的情况,利用空间动力学的思想对一维中的长域进行了分析。在猎物扩散速度比捕食者慢得多的极限下,图灵分支被发现是亚临界的,这在波莫钉扎参数区域内产生了局部模式。描绘了局部图案和孤立斑点的参数区域。对于现实的参数范围,平衡平衡状态的时间Hopf分岔发生在局部模式区域内。详细的谱计算和数值模拟揭示了Hopf分岔是如何由附近参数值的局部化结构继承的,从而产生时间周期性和混沌局部化模式。2D中的模拟结果证实了在相应的参数区域内复杂的时空模式的开始。通过在具有二次相互作用和饱和的相似模型中定性地显示相同的分叉结构,证实了结果的普遍性。简要讨论了对生态学的影响。
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引用次数: 4
Integrable reduction and solitons of the Fokas–Lenells equation Fokas–Lenells方程的可积约化和孤立子
IF 1.2 4区 数学 Q2 MATHEMATICS, APPLIED Pub Date : 2021-06-01 DOI: 10.1093/imamat/hxab020
Theodoros P Horikis
Novel soliton structures are constructed for the Fokas–Lenells equation. In so doing, and after discussing the stability of continuous waves, a multiple scales based perturbation theory is used to reduce the equation to a Korteweg–de Vries system whose single soliton solution gives rise to intricate (and rather unexpected) solutions to the original system. Both the focusing and defocusing equations are considered and it is found that dark solitons may exist in both cases while in the focusing case antidark solitons are also possible. These findings are quite surprising as the relative nonlinear Schrödinger equation does not exhibit these solutions. So far, similar abundance of solutions has only been observed in relative coupled systems.
为Fokas–Lenells方程构造了新的孤子结构。在这样做的过程中,在讨论了连续波的稳定性之后,使用基于多尺度的微扰理论将方程简化为Korteweg–de Vries系统,该系统的单孤立子解会对原始系统产生复杂(而且相当出乎意料)的解。考虑了聚焦和散焦方程,发现在这两种情况下都可能存在暗孤子,而在聚焦情况下也可能存在反暗孤子。这些发现非常令人惊讶,因为相对非线性的薛定谔方程没有表现出这些解。到目前为止,只有在相对耦合的系统中才观察到类似的大量解。
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引用次数: 1
期刊
IMA Journal of Applied Mathematics
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