Pub Date : 2025-12-15DOI: 10.1186/s40104-025-01312-8
Pedro Sá, Marta Gòdia, Rodrigo M Godinho, Claudia A Sevillano, Barbara Harlizius, Ole Madsen, Henk Bovenhuis
Background: Understanding the genetic basis of male reproduction in mammals remains challenging. Commercial pig populations offer a unique model for studying fertility, as semen traits are routinely recorded using high-throughput systems.
Results: In a large-scale GWAS of 15 semen traits based on 286,314 ejaculates collected from 2,954 boars of a purebred pig line, we identified 10 QTL, including four loci with recessive deleterious alleles. Several lead SNPs affected multiple semen traits. For example, a SNP on SSC6 was significantly associated with distal cytoplasmic droplets and with effects on tail abnormalities and sperm motility in a follow up analysis. The allele frequencies of some loci were different in older boar's, most likely due to culling based on poor semen quality. Using WGS, we identified six missense variants in high linkage disequilibrium (LD) with lead SNPs in genes related to sperm production (e.g., MEIOB, CFAP74 and UBE2B). Remarkably, the frequency of some alleles with predicted deleterious effects on semen traits increased between 2013 and 2019.
Conclusions: Our results highlight loci with major effects on semen quality, some of which are linked to functional variants in key genes involved in spermatogenesis. The information from this study can be used to select against deleterious alleles affecting semen characteristics in pigs and provides valuable insight into the genetics of mammalian male fertility.
{"title":"A genome-wide association study reveals additive and recessive alleles affecting male fertility in pigs.","authors":"Pedro Sá, Marta Gòdia, Rodrigo M Godinho, Claudia A Sevillano, Barbara Harlizius, Ole Madsen, Henk Bovenhuis","doi":"10.1186/s40104-025-01312-8","DOIUrl":"10.1186/s40104-025-01312-8","url":null,"abstract":"<p><strong>Background: </strong>Understanding the genetic basis of male reproduction in mammals remains challenging. Commercial pig populations offer a unique model for studying fertility, as semen traits are routinely recorded using high-throughput systems.</p><p><strong>Results: </strong>In a large-scale GWAS of 15 semen traits based on 286,314 ejaculates collected from 2,954 boars of a purebred pig line, we identified 10 QTL, including four loci with recessive deleterious alleles. Several lead SNPs affected multiple semen traits. For example, a SNP on SSC6 was significantly associated with distal cytoplasmic droplets and with effects on tail abnormalities and sperm motility in a follow up analysis. The allele frequencies of some loci were different in older boar's, most likely due to culling based on poor semen quality. Using WGS, we identified six missense variants in high linkage disequilibrium (LD) with lead SNPs in genes related to sperm production (e.g., MEIOB, CFAP74 and UBE2B). Remarkably, the frequency of some alleles with predicted deleterious effects on semen traits increased between 2013 and 2019.</p><p><strong>Conclusions: </strong>Our results highlight loci with major effects on semen quality, some of which are linked to functional variants in key genes involved in spermatogenesis. The information from this study can be used to select against deleterious alleles affecting semen characteristics in pigs and provides valuable insight into the genetics of mammalian male fertility.</p>","PeriodicalId":64067,"journal":{"name":"Journal of Animal Science and Biotechnology","volume":"16 1","pages":"171"},"PeriodicalIF":6.5,"publicationDate":"2025-12-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12703936/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145758563","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-10DOI: 10.1186/s40104-025-01304-8
Gaoqing Xu, Zhuoxuan Gu, Ziming Wang, Jing Zhao, He Ding, Hongyu Liu, Yi Fang, Xin Ma, Jing Guo, Wenfa Lyu, Jun Wang
Background: The cellular basis of testicular development and spermatogenesis for the extreme sperm density in chickens (100-fold higher than mammals) remains poorly defined. A comprehensive understanding of the molecular characteristics driving poultry testicular development is crucial for explaining this enhanced spermatogenic capacity.
Results: Here, we first established a single-cell transcriptome profile of chicken testes from hatching to maturity, identifying the dynamic transcriptional characteristics of germ cell fate transition and exploring the developmental characteristics of Sertoli cells and Leydig cells. Multi-species comparisons revealed a higher proportion of germ cells and the unique adaptations of Sertoli cells in chicken testes. Most importantly, our results demonstrated that Sertoli cells dominated in somatic composition of mature chicken testes, and proliferating Sertoli cells persisted in chicken testes even after sexual maturity, while no proliferating Sertoli cells in mammals. We also found a richer interaction network between chicken testicular cells, especially the specific activation of Sertoli cell interaction signals, such as TGF-β, BMP, EGF, and activin. These adaptations of Sertoli cells may support the spermatogenic superiority in chickens. Additionally, our results indicated that cAMP responsive element binding protein 5 (CREB5) played a crucial role in maintaining the maturation and function of chicken Sertoli cells, and circadian rhythm promoted testosterone secretion and the development of Leydig cells.
Conclusion: Our study revealed that the sustained proliferative capacity of Sertoli cells, their enriched signaling network, and the regulatory roles of CREB5 and circadian rhythms collectively represented unique testicular adaptations in chickens. These findings may hold extraordinary significance in understanding the molecular characteristics of poultry testicular development, and provide a plausible framework for explaining enhanced spermatogenesis in poultry.
{"title":"Unique Sertoli cell adaptations support enhanced spermatogenesis in chickens.","authors":"Gaoqing Xu, Zhuoxuan Gu, Ziming Wang, Jing Zhao, He Ding, Hongyu Liu, Yi Fang, Xin Ma, Jing Guo, Wenfa Lyu, Jun Wang","doi":"10.1186/s40104-025-01304-8","DOIUrl":"10.1186/s40104-025-01304-8","url":null,"abstract":"<p><strong>Background: </strong>The cellular basis of testicular development and spermatogenesis for the extreme sperm density in chickens (100-fold higher than mammals) remains poorly defined. A comprehensive understanding of the molecular characteristics driving poultry testicular development is crucial for explaining this enhanced spermatogenic capacity.</p><p><strong>Results: </strong>Here, we first established a single-cell transcriptome profile of chicken testes from hatching to maturity, identifying the dynamic transcriptional characteristics of germ cell fate transition and exploring the developmental characteristics of Sertoli cells and Leydig cells. Multi-species comparisons revealed a higher proportion of germ cells and the unique adaptations of Sertoli cells in chicken testes. Most importantly, our results demonstrated that Sertoli cells dominated in somatic composition of mature chicken testes, and proliferating Sertoli cells persisted in chicken testes even after sexual maturity, while no proliferating Sertoli cells in mammals. We also found a richer interaction network between chicken testicular cells, especially the specific activation of Sertoli cell interaction signals, such as TGF-β, BMP, EGF, and activin. These adaptations of Sertoli cells may support the spermatogenic superiority in chickens. Additionally, our results indicated that cAMP responsive element binding protein 5 (CREB5) played a crucial role in maintaining the maturation and function of chicken Sertoli cells, and circadian rhythm promoted testosterone secretion and the development of Leydig cells.</p><p><strong>Conclusion: </strong>Our study revealed that the sustained proliferative capacity of Sertoli cells, their enriched signaling network, and the regulatory roles of CREB5 and circadian rhythms collectively represented unique testicular adaptations in chickens. These findings may hold extraordinary significance in understanding the molecular characteristics of poultry testicular development, and provide a plausible framework for explaining enhanced spermatogenesis in poultry.</p>","PeriodicalId":64067,"journal":{"name":"Journal of Animal Science and Biotechnology","volume":"16 1","pages":"170"},"PeriodicalIF":6.5,"publicationDate":"2025-12-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12690856/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145716947","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Zinc, an essential trace element, plays a pivotal role in maintaining animal health and physiological functions. This review comprehensively examines zinc metabolism-including absorption dynamics across species (poultry, ruminants, and non-ruminants), transport mechanisms, storage in tissues, e.g., the liver, and excretion pathways-and its multifaceted effects on animal health. Zinc critically regulates aspects of growth and development, particularly bone formation, as its deficiency induces skeletal deformities in young animals. It modulates immune function through zinc finger proteins, influencing immune organ integrity, lymphocyte proliferation, and cytokine expression. Reproductive performance is significantly affected by zinc, with its deficiency causing impaired spermatogenesis; delayed sexual maturity in males; and reduced litter size, embryonic survival, and placental function in females. At the molecular level, zinc regulates the activity of enzymes (e.g., SOD), signaling pathways (MAPK, NF-κB), and transcription factors (MTF-1, Sp1) to maintain homeostasis. Both zinc deficiency (due to dietary insufficiency, malabsorption, or physiological stress) and zinc excess (from environmental pollution or feed oversupplementation) adversely affect health, disrupting mineral balance, enzyme function, and gut microbiota. In animal production, inorganic (zinc oxide, zinc sulfate) and organic (zinc methionine) sources of zinc increase growth, immunity, and productivity, although sustainable strategies are needed to mitigate environmental risks. Future research should focus on novel zinc formulations, precision nutrition, and interactions with gut microbiota to optimize livestock health and sustainable husbandry.
{"title":"Zinc and animal health: an in-depth exploration of its role in physiological functions and regulatory molecular mechanisms.","authors":"Zhaolong Cai, Jingjing Wang, Yuxi Zhang, Xiaohan Li, Jilong Luo, Xuejiao Gao, Mengyao Guo","doi":"10.1186/s40104-025-01301-x","DOIUrl":"10.1186/s40104-025-01301-x","url":null,"abstract":"<p><p>Zinc, an essential trace element, plays a pivotal role in maintaining animal health and physiological functions. This review comprehensively examines zinc metabolism-including absorption dynamics across species (poultry, ruminants, and non-ruminants), transport mechanisms, storage in tissues, e.g., the liver, and excretion pathways-and its multifaceted effects on animal health. Zinc critically regulates aspects of growth and development, particularly bone formation, as its deficiency induces skeletal deformities in young animals. It modulates immune function through zinc finger proteins, influencing immune organ integrity, lymphocyte proliferation, and cytokine expression. Reproductive performance is significantly affected by zinc, with its deficiency causing impaired spermatogenesis; delayed sexual maturity in males; and reduced litter size, embryonic survival, and placental function in females. At the molecular level, zinc regulates the activity of enzymes (e.g., SOD), signaling pathways (MAPK, NF-κB), and transcription factors (MTF-1, Sp1) to maintain homeostasis. Both zinc deficiency (due to dietary insufficiency, malabsorption, or physiological stress) and zinc excess (from environmental pollution or feed oversupplementation) adversely affect health, disrupting mineral balance, enzyme function, and gut microbiota. In animal production, inorganic (zinc oxide, zinc sulfate) and organic (zinc methionine) sources of zinc increase growth, immunity, and productivity, although sustainable strategies are needed to mitigate environmental risks. Future research should focus on novel zinc formulations, precision nutrition, and interactions with gut microbiota to optimize livestock health and sustainable husbandry.</p>","PeriodicalId":64067,"journal":{"name":"Journal of Animal Science and Biotechnology","volume":"16 1","pages":"169"},"PeriodicalIF":6.5,"publicationDate":"2025-12-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12687542/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145716901","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Background: Weaning-induced diarrhoea and growth retardation in piglets are associated with impaired intestinal barrier function and decreased levels of colonic short-chain fatty acids (SCFAs). Although SCFA supplementation has been proposed to mitigate these issues, the efficacy and optimal dosage of sodium isobutyrate remain unclear.
Results: We investigated the effects of sodium isobutyrate supplementation (500, 1,000, 2,000, and 4,000 mg/kg diet) on weaned piglets (Duroc × Landrace × Yorkshire, 28 d of age; n = 8). After a 28-d feeding trial, supplementation at 500-2,000 mg/kg significantly improved average daily gain and feed efficiency and reduced diarrhoea frequency, with maximal benefits observed at 1,000 mg/kg (P < 0.0001). Additionally, 500-1,000 mg/kg sodium isobutyrate supplementation increased the apparent digestibility of crude protein, organic matter, and crude fibre (P < 0.05). Serum biochemical parameters were unaffected, although secretory immunoglobulin A (SIgA) levels significantly increased upon supplementation with 500-1,000 mg/kg (P < 0.05). 16S rRNA gene sequencing indicated that sodium isobutyrate increased the abundance of beneficial colonic microbiota. The 1,000 mg/kg group presented the most pronounced effect, with a significant increase of the relative abundance of Prevotella and the greatest improvement in SCFA concentrations (P < 0.05). Metabolomics revealed elevated levels of colonic indole-3-lactic acid and 3-hydroxybutyrate upon supplementation with 1,000 mg/kg (P < 0.05). Transcriptomic analyses indicated activation of protein digestion and absorption pathways, and PI3K-Akt signalling, marked by TSG-6 upregulation and the suppression of ISG15 and DDIT4 expression (P < 0.05). Supplementation with 1,000 mg/kg was associated with improved intestinal barrier-related markers, including reduced serum D-lactate, diamine oxidase, and lipopolysaccharide levels, increased tight junction protein expression; activation of G protein-coupled receptors; and inhibition of TLR4/MyD88/NF-κB signalling (P < 0.05), suggesting enhanced barrier function.
Conclusions: In conclusion, dietary supplementation with 1,000 mg/kg sodium isobutyrate was associated with improved intestinal morphology, reduced serum permeability, increased expression of tight junction proteins, and enhanced immune function in weaned piglets, suggesting enhanced colonic barrier function and providing dosage guidance and mechanistic insights for future applications.
{"title":"Dietary supplementation with sodium isobutyrate enhances growth performance and colonic barrier function in weaned piglets via microbiota-metabolite-host interactions.","authors":"Xiuyu Fang, Zihan Chi, Zhengyi Wang, Xinlin Wang, Xingrui Qu, Shuang Zhang, Feng Gao, Baoming Shi, Xuan Zhao","doi":"10.1186/s40104-025-01310-w","DOIUrl":"10.1186/s40104-025-01310-w","url":null,"abstract":"<p><strong>Background: </strong>Weaning-induced diarrhoea and growth retardation in piglets are associated with impaired intestinal barrier function and decreased levels of colonic short-chain fatty acids (SCFAs). Although SCFA supplementation has been proposed to mitigate these issues, the efficacy and optimal dosage of sodium isobutyrate remain unclear.</p><p><strong>Results: </strong>We investigated the effects of sodium isobutyrate supplementation (500, 1,000, 2,000, and 4,000 mg/kg diet) on weaned piglets (Duroc × Landrace × Yorkshire, 28 d of age; n = 8). After a 28-d feeding trial, supplementation at 500-2,000 mg/kg significantly improved average daily gain and feed efficiency and reduced diarrhoea frequency, with maximal benefits observed at 1,000 mg/kg (P < 0.0001). Additionally, 500-1,000 mg/kg sodium isobutyrate supplementation increased the apparent digestibility of crude protein, organic matter, and crude fibre (P < 0.05). Serum biochemical parameters were unaffected, although secretory immunoglobulin A (SIgA) levels significantly increased upon supplementation with 500-1,000 mg/kg (P < 0.05). 16S rRNA gene sequencing indicated that sodium isobutyrate increased the abundance of beneficial colonic microbiota. The 1,000 mg/kg group presented the most pronounced effect, with a significant increase of the relative abundance of Prevotella and the greatest improvement in SCFA concentrations (P < 0.05). Metabolomics revealed elevated levels of colonic indole-3-lactic acid and 3-hydroxybutyrate upon supplementation with 1,000 mg/kg (P < 0.05). Transcriptomic analyses indicated activation of protein digestion and absorption pathways, and PI3K-Akt signalling, marked by TSG-6 upregulation and the suppression of ISG15 and DDIT4 expression (P < 0.05). Supplementation with 1,000 mg/kg was associated with improved intestinal barrier-related markers, including reduced serum D-lactate, diamine oxidase, and lipopolysaccharide levels, increased tight junction protein expression; activation of G protein-coupled receptors; and inhibition of TLR4/MyD88/NF-κB signalling (P < 0.05), suggesting enhanced barrier function.</p><p><strong>Conclusions: </strong>In conclusion, dietary supplementation with 1,000 mg/kg sodium isobutyrate was associated with improved intestinal morphology, reduced serum permeability, increased expression of tight junction proteins, and enhanced immune function in weaned piglets, suggesting enhanced colonic barrier function and providing dosage guidance and mechanistic insights for future applications.</p>","PeriodicalId":64067,"journal":{"name":"Journal of Animal Science and Biotechnology","volume":"16 1","pages":"168"},"PeriodicalIF":6.5,"publicationDate":"2025-12-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12683800/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145703121","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-06DOI: 10.1186/s40104-025-01313-7
Kwangwook Kim, Sangwoo Park, Cynthia Jinno, Peng Ji, Yanhong Liu
Background: Our previous study demonstrated that dietary supplementation of Bacillus subtilis enhanced growth performance and intestinal integrity in weaned pigs challenged with enterotoxigenic Escherichia coli (ETEC). Therefore, this study aimed to explore the impact of Bacillus subtilis on gut health and its role in modulating host-microbe interactions in post-weaning pigs.
Results: ETEC infection disrupted key metabolic pathways in distal colon, including glutathione, beta-alanine, and pyrimidine metabolism, indicating increased oxidative stress, impaired nucleotide balance, and amino acid catabolic stress. Bacillus subtilis supplementation induced distinct metabolomic and microbiome profiles in colon digesta of weaned pigs challenged with ETEC. Bacillus subtilis-treated pigs under ETEC challenge exhibited significant enrichment in amino acid- and energy-related pathways such as arginine biosynthesis, phenylalanine metabolism, pantothenate and CoA biosynthesis. ETEC infection induced microbial dysbiosis in the distal colon, resulting in decrease (P < 0.05) in abundance of Streptococcaceae and Enterobacteriaceae compared to healthy controls. Bacillus subtilis supplementation mitigated the ETEC-induced disruptions by increasing the relative abundance of beneficial bacterial families, including Lachnospiraceae and Bacteroidaceae.
Conclusion: Supplementation of Bacillus subtilis improves intestinal health and resilience against ETEC challenge by mitigating infection-induced metabolic disruptions and gut dysbiosis in weaned pigs.
{"title":"Impact of dietary supplementation of Bacillus subtilis on the metabolic profiles and microbial ecology of weanling pigs experimentally infected with a pathogenic Escherichia coli.","authors":"Kwangwook Kim, Sangwoo Park, Cynthia Jinno, Peng Ji, Yanhong Liu","doi":"10.1186/s40104-025-01313-7","DOIUrl":"10.1186/s40104-025-01313-7","url":null,"abstract":"<p><strong>Background: </strong>Our previous study demonstrated that dietary supplementation of Bacillus subtilis enhanced growth performance and intestinal integrity in weaned pigs challenged with enterotoxigenic Escherichia coli (ETEC). Therefore, this study aimed to explore the impact of Bacillus subtilis on gut health and its role in modulating host-microbe interactions in post-weaning pigs.</p><p><strong>Results: </strong>ETEC infection disrupted key metabolic pathways in distal colon, including glutathione, beta-alanine, and pyrimidine metabolism, indicating increased oxidative stress, impaired nucleotide balance, and amino acid catabolic stress. Bacillus subtilis supplementation induced distinct metabolomic and microbiome profiles in colon digesta of weaned pigs challenged with ETEC. Bacillus subtilis-treated pigs under ETEC challenge exhibited significant enrichment in amino acid- and energy-related pathways such as arginine biosynthesis, phenylalanine metabolism, pantothenate and CoA biosynthesis. ETEC infection induced microbial dysbiosis in the distal colon, resulting in decrease (P < 0.05) in abundance of Streptococcaceae and Enterobacteriaceae compared to healthy controls. Bacillus subtilis supplementation mitigated the ETEC-induced disruptions by increasing the relative abundance of beneficial bacterial families, including Lachnospiraceae and Bacteroidaceae.</p><p><strong>Conclusion: </strong>Supplementation of Bacillus subtilis improves intestinal health and resilience against ETEC challenge by mitigating infection-induced metabolic disruptions and gut dysbiosis in weaned pigs.</p>","PeriodicalId":64067,"journal":{"name":"Journal of Animal Science and Biotechnology","volume":"16 1","pages":"167"},"PeriodicalIF":6.5,"publicationDate":"2025-12-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12681179/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145688731","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-05DOI: 10.1186/s40104-025-01308-4
Xinyue Zhang, Xiaojing Liu, Siyuan Liu, Weixuan Tang, Shaoxiong Ji, Hongjin Ji, Ya Jing Wang, Zhijun Cao, Hongjian Yang, Wei Wang, Shengli Li
Background: Fatty liver syndrome is a prevalent metabolic disorder in transition dairy cows, characterized by excessive hepatic lipid accumulation that impairs liver function and leads to systemic metabolic disturbances. Docosahexaenoic acid (DHA), a prominent n-3 polyunsaturated fatty acid (PUFA), not only exhibits anti-inflammatory and anti-oxidative properties, but also holds potential in ameliorating lipid metabolism. This study integrated in vitro bovine primary hepatocyte models and in vivo dairy cow trials to investigate the regulatory effects of DHA on hepatic lipid deposition.
Results: In vitro, 40 μmol/L DHA significantly reduced triglyceride (TAG) accumulation in steatotic hepatocytes by downregulating genes involved in fatty acid transport (FABP-1, CD36) and lipogenesis (DGAT2, FAS, SREBP-1C), while upregulating markers of lipolysis (CGI-58, ATGL) and fatty acid oxidation (ACADL, CPT1A, CPT2). Transmission electron microscopy (TEM) confirmed DHA-mediated restoration of mitochondrial ultrastructure and enhanced lipid droplet (LD)-mitochondria interactions. In vivo, dietary rumen-protected DHA (180 g/d) supplementation reduced hepatic lipid deposition, improved liver function (evidenced by decreased total bilirubin and alanine aminotransferase), reduced oxidative stress and inflammation (suppressed malondialdehyde, glutathione peroxidase, and lipopolysaccharide), coincided with relieving insulin resistance (reduced insulin and glucose, as well increased adiponectin) in dairy cows with fatty liver. These improvements may be attributed to increased expression of TOMM20 and MtCo-1, promoting mitochondrial biogenesis and β-oxidation, along with an elevated plasma n-3/n-6 ratio.
Conclusions: Collectively, these findings suggest that DHA supplementation represents a promising nutritional strategy for preventing spontaneous fatty liver in transition dairy cows by enhancing hepatic lipid clearance and restoring metabolic homeostasis.
{"title":"Docosahexaenoic acid (DHA) alleviates hepatic lipid deposition in dairy cows during the transition period: an integrated in vitro and in vivo study.","authors":"Xinyue Zhang, Xiaojing Liu, Siyuan Liu, Weixuan Tang, Shaoxiong Ji, Hongjin Ji, Ya Jing Wang, Zhijun Cao, Hongjian Yang, Wei Wang, Shengli Li","doi":"10.1186/s40104-025-01308-4","DOIUrl":"10.1186/s40104-025-01308-4","url":null,"abstract":"<p><strong>Background: </strong>Fatty liver syndrome is a prevalent metabolic disorder in transition dairy cows, characterized by excessive hepatic lipid accumulation that impairs liver function and leads to systemic metabolic disturbances. Docosahexaenoic acid (DHA), a prominent n-3 polyunsaturated fatty acid (PUFA), not only exhibits anti-inflammatory and anti-oxidative properties, but also holds potential in ameliorating lipid metabolism. This study integrated in vitro bovine primary hepatocyte models and in vivo dairy cow trials to investigate the regulatory effects of DHA on hepatic lipid deposition.</p><p><strong>Results: </strong>In vitro, 40 μmol/L DHA significantly reduced triglyceride (TAG) accumulation in steatotic hepatocytes by downregulating genes involved in fatty acid transport (FABP-1, CD36) and lipogenesis (DGAT2, FAS, SREBP-1C), while upregulating markers of lipolysis (CGI-58, ATGL) and fatty acid oxidation (ACADL, CPT1A, CPT2). Transmission electron microscopy (TEM) confirmed DHA-mediated restoration of mitochondrial ultrastructure and enhanced lipid droplet (LD)-mitochondria interactions. In vivo, dietary rumen-protected DHA (180 g/d) supplementation reduced hepatic lipid deposition, improved liver function (evidenced by decreased total bilirubin and alanine aminotransferase), reduced oxidative stress and inflammation (suppressed malondialdehyde, glutathione peroxidase, and lipopolysaccharide), coincided with relieving insulin resistance (reduced insulin and glucose, as well increased adiponectin) in dairy cows with fatty liver. These improvements may be attributed to increased expression of TOMM20 and MtCo-1, promoting mitochondrial biogenesis and β-oxidation, along with an elevated plasma n-3/n-6 ratio.</p><p><strong>Conclusions: </strong>Collectively, these findings suggest that DHA supplementation represents a promising nutritional strategy for preventing spontaneous fatty liver in transition dairy cows by enhancing hepatic lipid clearance and restoring metabolic homeostasis.</p>","PeriodicalId":64067,"journal":{"name":"Journal of Animal Science and Biotechnology","volume":"16 1","pages":"166"},"PeriodicalIF":6.5,"publicationDate":"2025-12-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12679754/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145679360","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-04DOI: 10.1186/s40104-025-01302-w
Vahideh Shay Sadr, Jose A Quinteros, Sonia Yun Liu, Reza Barekatain
The primary role of the gastrointestinal tract in broiler chickens is nutrient assimilation, with transporter proteins facilitating the uptake of amino acids, peptides, monosaccharides, fatty acids, and minerals across the intestinal epithelium. Among these nutrient transporters, members of the solute carrier family are particularly important, and gene expression analyses targeting these transporters have provided informative insights into how birds adapt to diverse dietary, environmental, and physiological challenges to maintain nutrient homeostasis. These transporters are expressed either at the brush border membrane, where they facilitate the absorption of nutrients from the gut lumen into enterocytes, or at the basolateral membrane, where they mediate the transfer of nutrients from the enterocytes into the bloodstream. The expression of these transporters is influenced by a range of factors, including bird age, sex, intestinal segment, dietary substrate availability and source, as well as external stressors such as heat stress and pathogen exposure. While upregulation of transporter genes often suggests an enhanced capacity for nutrient uptake, it does not always correlate with improved growth performance, due to compensatory physiological responses and fluctuations in nutrient bioavailability. Understanding the regulation and functional dynamics of nutrient transporters presents valuable opportunities to develop targeted dietary and management strategies aimed at optimizing nutrient utilization and improving bird performance. This review summarizes current knowledge on the classification, function, and regulation of key nutrient transporters in broilers, highlights factors influencing their expression, and explores their implications for nutrition and production efficiency.
{"title":"Nutrient transporters in broiler chickens: intestinal gene expression profiles, functional roles, and influencing factors.","authors":"Vahideh Shay Sadr, Jose A Quinteros, Sonia Yun Liu, Reza Barekatain","doi":"10.1186/s40104-025-01302-w","DOIUrl":"10.1186/s40104-025-01302-w","url":null,"abstract":"<p><p>The primary role of the gastrointestinal tract in broiler chickens is nutrient assimilation, with transporter proteins facilitating the uptake of amino acids, peptides, monosaccharides, fatty acids, and minerals across the intestinal epithelium. Among these nutrient transporters, members of the solute carrier family are particularly important, and gene expression analyses targeting these transporters have provided informative insights into how birds adapt to diverse dietary, environmental, and physiological challenges to maintain nutrient homeostasis. These transporters are expressed either at the brush border membrane, where they facilitate the absorption of nutrients from the gut lumen into enterocytes, or at the basolateral membrane, where they mediate the transfer of nutrients from the enterocytes into the bloodstream. The expression of these transporters is influenced by a range of factors, including bird age, sex, intestinal segment, dietary substrate availability and source, as well as external stressors such as heat stress and pathogen exposure. While upregulation of transporter genes often suggests an enhanced capacity for nutrient uptake, it does not always correlate with improved growth performance, due to compensatory physiological responses and fluctuations in nutrient bioavailability. Understanding the regulation and functional dynamics of nutrient transporters presents valuable opportunities to develop targeted dietary and management strategies aimed at optimizing nutrient utilization and improving bird performance. This review summarizes current knowledge on the classification, function, and regulation of key nutrient transporters in broilers, highlights factors influencing their expression, and explores their implications for nutrition and production efficiency.</p>","PeriodicalId":64067,"journal":{"name":"Journal of Animal Science and Biotechnology","volume":"16 1","pages":"165"},"PeriodicalIF":6.5,"publicationDate":"2025-12-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12676860/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145670580","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-03DOI: 10.1186/s40104-025-01300-y
Shuyong Xu, Guangyong Zhao, Mark D Hanigan, Gonzalo Cantalapiedra-Hijar, Mengmeng Li
Skeletal muscle accounts for approximately 40% of body mass and 50%-75% of whole-body protein, playing a central role in meat production and quality. Efficient protein synthesis in skeletal muscle relies on an adequate supply of nutrient substrates and a balanced amino acid profile. Branched-chain amino acids (BCAA), including leucine (Leu), isoleucine (Ile), and valine (Val), are the most abundant essential amino acids in skeletal muscle and contribute to both protein synthesis and oxidative energy production. Additionally, BCAA function as signaling molecules that regulate gene expression and protein phosphorylation cascades, which significantly influence physiological processes, such as protein synthesis and degradation, glucose and lipid metabolism, and cell apoptosis and autophagy. These processes are primarily mediated through the PI3K/AKT/AMPK/mTOR signaling pathways. This review summarizes BCAA transporters and catabolic metabolism, their role as signaling molecules in regulating protein metabolism and glucose and lipid equilibrium, and applications in animal production. These findings offer both theoretical insights and practical guidelines for the precise regulation of feed efficiency and production performance through tailored dietary BCAA supplementations.
{"title":"Branched-chain amino acids in muscle growth: mechanisms, physiological functions, and applications.","authors":"Shuyong Xu, Guangyong Zhao, Mark D Hanigan, Gonzalo Cantalapiedra-Hijar, Mengmeng Li","doi":"10.1186/s40104-025-01300-y","DOIUrl":"10.1186/s40104-025-01300-y","url":null,"abstract":"<p><p>Skeletal muscle accounts for approximately 40% of body mass and 50%-75% of whole-body protein, playing a central role in meat production and quality. Efficient protein synthesis in skeletal muscle relies on an adequate supply of nutrient substrates and a balanced amino acid profile. Branched-chain amino acids (BCAA), including leucine (Leu), isoleucine (Ile), and valine (Val), are the most abundant essential amino acids in skeletal muscle and contribute to both protein synthesis and oxidative energy production. Additionally, BCAA function as signaling molecules that regulate gene expression and protein phosphorylation cascades, which significantly influence physiological processes, such as protein synthesis and degradation, glucose and lipid metabolism, and cell apoptosis and autophagy. These processes are primarily mediated through the PI3K/AKT/AMPK/mTOR signaling pathways. This review summarizes BCAA transporters and catabolic metabolism, their role as signaling molecules in regulating protein metabolism and glucose and lipid equilibrium, and applications in animal production. These findings offer both theoretical insights and practical guidelines for the precise regulation of feed efficiency and production performance through tailored dietary BCAA supplementations.</p>","PeriodicalId":64067,"journal":{"name":"Journal of Animal Science and Biotechnology","volume":"16 1","pages":"164"},"PeriodicalIF":6.5,"publicationDate":"2025-12-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12673755/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145662691","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-02DOI: 10.1186/s40104-025-01299-2
Chan Liang, Runqi Fu, Daiwen Chen, Gang Tian, Jun He, Ping Zheng, Jie Yu, Junning Pu, Bing Yu
Background: Low dietary energy levels can disrupt energy balance, causing metabolic disorders, particularly those involving in hepatic lipid metabolism. Betaine (BET), an important methyl donor, has demonstrated protective effects against liver diseases. However, its effects on hepatic lipid metabolism in pigs fed a low-net energy (NE) diet and the underlying mechanisms remain unclear. Thirty-two pigs (85.52 ± 2.27 kg) were randomly assigned to four treatments: N-NE group (normal NE diet, 2,475 kcal/kg NE), N-NEB group (normal NE diet + 1,500 mg/kg BET, 2,475 kcal/kg NE), R100-NE group (low-NE diet, 2,375 kcal/kg NE), and R100-NEB group (low-NE diet + 1,500 mg/kg BET, 2,375 kcal/kg NE). The experiment lasted 35 d.
Results: There was no significant difference in growth performance among the groups (P > 0.05). Reducing dietary NE levels caused liver dysfunction and increased total glyceride concentration, accompanied by lipid metabolism disorders. BET supplementation in a low-NE diet exhibited hepatoprotective roles, as evidenced by increased TP concentration and reduced ALT level in serum (P < 0.05), as well as decreased fat content, adipocyte size, and total glyceride concentration in the liver (P < 0.05). Meanwhile, dietary BET alleviated low-NE diet-induced hepatic lipid metabolism disorder by downregulating mRNA expressions of genes related to fatty acid transport (FABP3 and CD36) and lipogenesis (SREBP1c and FASN), while upregulating mRNA expressions involved in lipolysis (CPT1 and HSL) (P < 0.05). Furthermore, dietary BET increased serum SAM concentration and the SAM/SAH ratio in pigs fed low-NE diets (P < 0.05), thereby providing sufficient methyl groups through regulating the activities of enzymes participated in BET metabolism. Mechanistically, BET increased m6A modification level and regulated mRNA and protein expressions of m6A modified proteins including METTL3, METTL14, WTAP, YTHDF1, and ALKBH5. Correlation analysis showed a significant association between m6A RNA methylation and hepatic lipid metabolism, suggesting that m6A RNA methylation may play a critical role in mediating hepatic lipid metabolism.
Conclusions: Dietary BET supplementation in low-NE diets alleviated hepatic lipid metabolism disorders by regulating m6A RNA methylation, ultimately reducing hepatic lipid accumulation in finishing pigs.
{"title":"Betaine alleviates hepatic lipid metabolism disorder in finishing pigs fed a low-energy diet through regulating m<sup>6</sup>A RNA methylation.","authors":"Chan Liang, Runqi Fu, Daiwen Chen, Gang Tian, Jun He, Ping Zheng, Jie Yu, Junning Pu, Bing Yu","doi":"10.1186/s40104-025-01299-2","DOIUrl":"10.1186/s40104-025-01299-2","url":null,"abstract":"<p><strong>Background: </strong>Low dietary energy levels can disrupt energy balance, causing metabolic disorders, particularly those involving in hepatic lipid metabolism. Betaine (BET), an important methyl donor, has demonstrated protective effects against liver diseases. However, its effects on hepatic lipid metabolism in pigs fed a low-net energy (NE) diet and the underlying mechanisms remain unclear. Thirty-two pigs (85.52 ± 2.27 kg) were randomly assigned to four treatments: N-NE group (normal NE diet, 2,475 kcal/kg NE), N-NEB group (normal NE diet + 1,500 mg/kg BET, 2,475 kcal/kg NE), R100-NE group (low-NE diet, 2,375 kcal/kg NE), and R100-NEB group (low-NE diet + 1,500 mg/kg BET, 2,375 kcal/kg NE). The experiment lasted 35 d.</p><p><strong>Results: </strong>There was no significant difference in growth performance among the groups (P > 0.05). Reducing dietary NE levels caused liver dysfunction and increased total glyceride concentration, accompanied by lipid metabolism disorders. BET supplementation in a low-NE diet exhibited hepatoprotective roles, as evidenced by increased TP concentration and reduced ALT level in serum (P < 0.05), as well as decreased fat content, adipocyte size, and total glyceride concentration in the liver (P < 0.05). Meanwhile, dietary BET alleviated low-NE diet-induced hepatic lipid metabolism disorder by downregulating mRNA expressions of genes related to fatty acid transport (FABP3 and CD36) and lipogenesis (SREBP1c and FASN), while upregulating mRNA expressions involved in lipolysis (CPT1 and HSL) (P < 0.05). Furthermore, dietary BET increased serum SAM concentration and the SAM/SAH ratio in pigs fed low-NE diets (P < 0.05), thereby providing sufficient methyl groups through regulating the activities of enzymes participated in BET metabolism. Mechanistically, BET increased m<sup>6</sup>A modification level and regulated mRNA and protein expressions of m<sup>6</sup>A modified proteins including METTL3, METTL14, WTAP, YTHDF1, and ALKBH5. Correlation analysis showed a significant association between m<sup>6</sup>A RNA methylation and hepatic lipid metabolism, suggesting that m<sup>6</sup>A RNA methylation may play a critical role in mediating hepatic lipid metabolism.</p><p><strong>Conclusions: </strong>Dietary BET supplementation in low-NE diets alleviated hepatic lipid metabolism disorders by regulating m<sup>6</sup>A RNA methylation, ultimately reducing hepatic lipid accumulation in finishing pigs.</p>","PeriodicalId":64067,"journal":{"name":"Journal of Animal Science and Biotechnology","volume":"16 1","pages":"163"},"PeriodicalIF":6.5,"publicationDate":"2025-12-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12670804/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145656099","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-01DOI: 10.1186/s40104-025-01291-w
Youyoung Choi, Mi Zhou, Atmir Romero-Pérez, Karen A Beauchemin, Stephane Duval, Maik Kindermann, Le Luo Guan
Background: The enteric methane inhibitor 3-nitrooxypropanol (3-NOP) inhibits the key enzyme in ruminal methanogenesis, but whether short-term (ST) and long-term (LT) dietary supplementation has similar effects on rumen microbiota in beef cattle and how microbes change after 3-NOP withdrawal have not been studied. This study investigated changes in rumen bacteria, archaea, and protozoa after ST and LT dietary supplementation and removal of 3-NOP using metataxonomic analysis.
Results: A total of 143 rumen samples were collected from two beef cattle studies with 3-NOP supplementation. The ST study (95 samples) used eight ruminally cannulated beef cattle in a 4 × 4 Latin square design with four 28-d of 3-NOP treatments [mg/kg of dry matter (DM)]: control: 0, low: 53, med: 161, and high: 345. The LT study (48 samples) was a completely randomized design with two 3-NOP treatments [control: 0, and high: 280 mg/kg of DM) fed for 112-d followed by a 16-d withdrawal (without 3-NOP). Bacterial and archaeal communities were significantly affected by 3-NOP supplementation but limited effects on protozoal communities were observed. Under ST supplementation, the relative abundances of Prevotella, Methanobrevibacter (Mbb.) ruminantium, Methanosphaera sp. ISO3-F5, and Entodinium were increased (Q < 0.05), whereas those of Mbb. gottschalkii and Epidinium were decreased (Q < 0.05) with 3-NOP supplementation. In LT study, relative abundances of Mbb. ruminantium, and Methanosphaera sp. Group5 were increased (Q < 0.05), while those of Saccharofermentans and Mbb. gottschalkii were decreased (Q < 0.05) with 3-NOP supplementation. Comparison between 3-NOP supplementation and the withdrawal revealed increased relative abundances of Clostridia UCG-014 and Oscillospiraceae NK4A214 group and decreased those of Eubacterium nodatum group and Methanosphaera sp. Group5 (P < 0.05) after 3-NOP withdrawal. Further comparison of rumen microbiota between control and 3-NOP withdrawal showed significantly higher (P = 0.029) relative abundances of Eggerthellaceae DNF00809, p-1088-a5 gut group, and Family XII UCG-001 in control group while no significant differences were detected for archaea and protozoa. Microbial network analysis revealed that microbial interactions differed by both 3-NOP dose and durations.
Conclusions: Both ST and LT supplementation affected overall rumen microbial profile, with individual microbial groups responded to 3-NOP supplementation differently. After 3-NOP withdrawal, not all microbes showed recovery, indicating that the 3-NOP driven shifts were only partially reversible. These findings provide an understanding of the effects of 3-NOP on rumen microbial communities and their adaptability to methane mitigation strategies.
{"title":"Short- and long-term dietary supplementation as well as withdrawal of the enteric methane inhibitor 3-nitrooxypropanol reveal distinct effects on the rumen microbial community.","authors":"Youyoung Choi, Mi Zhou, Atmir Romero-Pérez, Karen A Beauchemin, Stephane Duval, Maik Kindermann, Le Luo Guan","doi":"10.1186/s40104-025-01291-w","DOIUrl":"10.1186/s40104-025-01291-w","url":null,"abstract":"<p><strong>Background: </strong>The enteric methane inhibitor 3-nitrooxypropanol (3-NOP) inhibits the key enzyme in ruminal methanogenesis, but whether short-term (ST) and long-term (LT) dietary supplementation has similar effects on rumen microbiota in beef cattle and how microbes change after 3-NOP withdrawal have not been studied. This study investigated changes in rumen bacteria, archaea, and protozoa after ST and LT dietary supplementation and removal of 3-NOP using metataxonomic analysis.</p><p><strong>Results: </strong>A total of 143 rumen samples were collected from two beef cattle studies with 3-NOP supplementation. The ST study (95 samples) used eight ruminally cannulated beef cattle in a 4 × 4 Latin square design with four 28-d of 3-NOP treatments [mg/kg of dry matter (DM)]: control: 0, low: 53, med: 161, and high: 345. The LT study (48 samples) was a completely randomized design with two 3-NOP treatments [control: 0, and high: 280 mg/kg of DM) fed for 112-d followed by a 16-d withdrawal (without 3-NOP). Bacterial and archaeal communities were significantly affected by 3-NOP supplementation but limited effects on protozoal communities were observed. Under ST supplementation, the relative abundances of Prevotella, Methanobrevibacter (Mbb.) ruminantium, Methanosphaera sp. ISO3-F5, and Entodinium were increased (Q < 0.05), whereas those of Mbb. gottschalkii and Epidinium were decreased (Q < 0.05) with 3-NOP supplementation. In LT study, relative abundances of Mbb. ruminantium, and Methanosphaera sp. Group5 were increased (Q < 0.05), while those of Saccharofermentans and Mbb. gottschalkii were decreased (Q < 0.05) with 3-NOP supplementation. Comparison between 3-NOP supplementation and the withdrawal revealed increased relative abundances of Clostridia UCG-014 and Oscillospiraceae NK4A214 group and decreased those of Eubacterium nodatum group and Methanosphaera sp. Group5 (P < 0.05) after 3-NOP withdrawal. Further comparison of rumen microbiota between control and 3-NOP withdrawal showed significantly higher (P = 0.029) relative abundances of Eggerthellaceae DNF00809, p-1088-a5 gut group, and Family XII UCG-001 in control group while no significant differences were detected for archaea and protozoa. Microbial network analysis revealed that microbial interactions differed by both 3-NOP dose and durations.</p><p><strong>Conclusions: </strong>Both ST and LT supplementation affected overall rumen microbial profile, with individual microbial groups responded to 3-NOP supplementation differently. After 3-NOP withdrawal, not all microbes showed recovery, indicating that the 3-NOP driven shifts were only partially reversible. These findings provide an understanding of the effects of 3-NOP on rumen microbial communities and their adaptability to methane mitigation strategies.</p>","PeriodicalId":64067,"journal":{"name":"Journal of Animal Science and Biotechnology","volume":"16 1","pages":"162"},"PeriodicalIF":6.5,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12667093/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145656081","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}