首页 > 最新文献

Journal of Molecular Neuroscience最新文献

英文 中文
Inhibiting the JNK Signaling Pathway Attenuates Hypersensitivity and Anxiety-Like Behavior in a Rat Model of Non-specific Chronic Low Back Pain. 抑制 JNK 信号通路可减轻非特异性慢性腰痛大鼠模型中的过度敏感和焦虑行为
IF 2.8 4区 医学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-07-24 DOI: 10.1007/s12031-024-02252-0
Yifan Li, Bingyu Zhang, Jie Xu, Xiao Jiang, Liang Jing, Yanghua Tian, Kai Wang, Juanjuan Zhang

Low back pain (LBP) has become a leading cause of disability worldwide. Astrocyte activation in the spinal cord plays an important role in the maintenance of latent sensitization of dorsal horn neurons in LBP. However, the role of spinal c-Jun N-terminal kinase (JNK) in astrocytes in modulating pain behavior of LBP model rats and its neurobiological mechanism have not been elucidated. Here, we investigate the role of the JNK signaling pathway on hypersensitivity and anxiety-like behavior caused by repetitive nerve growth factor (NGF) injections in male non-specific LBP model rats. LBP was produced by two injections (day 0, day 5) of NGF into multifidus muscle of the low backs of rats. We observed prolonged mechanical and thermal hypersensitivity in the low backs or hindpaws. Persistent anxiety-like behavior was observed, together with astrocyte, p-JNK, and neuronal activation and upregulated expression of monocyte chemoattractant protein-1 (MCP-1), and chemokine (C-X-C motif) ligand 1 (CXCL1) proteins in the spinal L2 segment. Second, the JNK inhibitor SP600125 was intrathecally administrated in rats from day 10 to day 12. It attenuated mechanical and thermal hypersensitivity of the low back or hindpaws and anxiety-like behavior. Meanwhile, SP600125 decreased astrocyte and neuronal activation and the expression of MCP-1 and CXCL1 proteins. These results showed that hypersensitivity and anxiety-like behavior induced by NGF in LBP rats could be attenuated by the JNK inhibitor, together with downregulation of spinal astrocyte activation, neuron activation, and inflammatory cytokines. Our results indicate that intervening with the spinal JNK signaling pathway presents an effective therapeutic approach to alleviating LBP.

腰背痛已成为全球致残的主要原因之一。脊髓星形胶质细胞的活化在维持腰背痛背角神经元的潜敏化过程中起着重要作用。然而,脊髓星形胶质细胞中的 c-Jun N 端激酶(JNK)在调节枸杞多糖模型大鼠疼痛行为中的作用及其神经生物学机制尚未阐明。在此,我们研究了 JNK 信号通路对雄性非特异性枸杞多糖模型大鼠重复注射神经生长因子(NGF)引起的超敏性和焦虑样行为的作用。向大鼠腰背部多裂肌注射两次(第0天和第5天)NGF可产生枸杞多糖症。我们观察到大鼠腰部或后爪长时间的机械和热过敏反应。我们还观察到持续的焦虑样行为,以及星形胶质细胞、p-JNK 和神经元活化,以及脊髓 L2 节段中单核细胞趋化蛋白-1(MCP-1)和趋化因子(C-X-C motif)配体 1(CXCL1)蛋白的表达上调。其次,从第 10 天到第 12 天,在大鼠体内注射 JNK 抑制剂 SP600125。它减轻了大鼠腰部或后爪的机械和热超敏反应以及焦虑样行为。同时,SP600125 还能降低星形胶质细胞和神经元的活化以及 MCP-1 和 CXCL1 蛋白的表达。这些结果表明,JNK抑制剂可减轻NGF诱导的枸杞多糖大鼠的超敏性和焦虑样行为,同时下调脊髓星形胶质细胞活化、神经元活化和炎性细胞因子。我们的研究结果表明,干预脊髓 JNK 信号通路是缓解枸杞多糖症的一种有效治疗方法。
{"title":"Inhibiting the JNK Signaling Pathway Attenuates Hypersensitivity and Anxiety-Like Behavior in a Rat Model of Non-specific Chronic Low Back Pain.","authors":"Yifan Li, Bingyu Zhang, Jie Xu, Xiao Jiang, Liang Jing, Yanghua Tian, Kai Wang, Juanjuan Zhang","doi":"10.1007/s12031-024-02252-0","DOIUrl":"10.1007/s12031-024-02252-0","url":null,"abstract":"<p><p>Low back pain (LBP) has become a leading cause of disability worldwide. Astrocyte activation in the spinal cord plays an important role in the maintenance of latent sensitization of dorsal horn neurons in LBP. However, the role of spinal c-Jun N-terminal kinase (JNK) in astrocytes in modulating pain behavior of LBP model rats and its neurobiological mechanism have not been elucidated. Here, we investigate the role of the JNK signaling pathway on hypersensitivity and anxiety-like behavior caused by repetitive nerve growth factor (NGF) injections in male non-specific LBP model rats. LBP was produced by two injections (day 0, day 5) of NGF into multifidus muscle of the low backs of rats. We observed prolonged mechanical and thermal hypersensitivity in the low backs or hindpaws. Persistent anxiety-like behavior was observed, together with astrocyte, p-JNK, and neuronal activation and upregulated expression of monocyte chemoattractant protein-1 (MCP-1), and chemokine (C-X-C motif) ligand 1 (CXCL1) proteins in the spinal L2 segment. Second, the JNK inhibitor SP600125 was intrathecally administrated in rats from day 10 to day 12. It attenuated mechanical and thermal hypersensitivity of the low back or hindpaws and anxiety-like behavior. Meanwhile, SP600125 decreased astrocyte and neuronal activation and the expression of MCP-1 and CXCL1 proteins. These results showed that hypersensitivity and anxiety-like behavior induced by NGF in LBP rats could be attenuated by the JNK inhibitor, together with downregulation of spinal astrocyte activation, neuron activation, and inflammatory cytokines. Our results indicate that intervening with the spinal JNK signaling pathway presents an effective therapeutic approach to alleviating LBP.</p>","PeriodicalId":652,"journal":{"name":"Journal of Molecular Neuroscience","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2024-07-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141750807","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Prepubertal Repeated Berberine Supplementation Enhances Cerebrocerebellar Functions by Modulating Neurochemical and Behavioural Changes in Wistar Rats. 青春期前反复补充小檗碱可通过调节Wistar大鼠的神经化学和行为变化增强其小脑功能
IF 2.8 4区 医学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-07-23 DOI: 10.1007/s12031-024-02250-2
Solomon Owumi, Joseph Chimezie, Moses Otunla, Bayode Oluwawibe, Harieme Agbarogi, Mayowa Anifowose, Uche Arunsi, Olatunde Owoeye

Antioxidant-rich supplementation plays an essential role in the function of mammals' central nervous system. However, no research has documented the effect of berberine (BER) supplementation on the cerebrocerebellar function of prepubertal rats. The present study was designed to investigate the impact of BER supplementation on neurochemical and behavioural changes in prepubertal male rats. Five groups (90 ± 5 g, n = 7 each) of experimental rats were orally treated with corn oil or different doses of BER (25, 50, 100, and 200 mg/kg bw) from the 28th at 68 post-natal days. On the 69 days of life, animals underwent behavioural assessment in the open field, hanging wire, and negative geotaxis tests. The result revealed that BER administration improved locomotive and motor behaviour by increasing distance travelled, line crossings, average speed, time mobile, and absolute turn angle in open field test and decrease in time to re-orient on an incline plane, a decrease in immobility time relative to the untreated control. Furthermore, BER supplementation increased (p < 0.05) antioxidant enzyme activities such as SOD, CAT, GPx, GSH, and TSH and prevented increases (p < 0.05) in oxidative and inflammatory levels as indicated by decreases in RONS, LPO, XO, carbonyl protein, NO, MPO, and TNF-α compared to the untreated control. BER-treated animals a lessened number of dark-stained Nissl cells compared to the untreated control rats. Our findings revealed that BER minimised neuronal degeneration and lesions, improved animal behaviour, and suppressed oxidative and inflammatory mediators, which may probably occur through its agonistic effect on PPAR-α, PPAR-δ, and PPAR-γ - essential proteins known to resolve inflammation and modulate redox signalling towards antioxidant function.

补充富含抗氧化剂的食物对哺乳动物中枢神经系统的功能起着至关重要的作用。然而,还没有研究记录补充小檗碱(BER)对青春期前大鼠大脑小脑功能的影响。本研究旨在探讨补充小檗碱对青春期前雄性大鼠神经化学物质和行为变化的影响。五组(每组 90 ± 5 克,n = 7 只)实验鼠从出生后第 28 天起至出生后第 68 天,分别口服玉米油或不同剂量的 BER(25、50、100 和 200 毫克/千克体重)。出生后第 69 天,对动物进行行为评估,包括空地、悬挂铁丝网和负向地心引力试验。结果表明,与未处理的对照组相比,添加BER能提高动物的运动和运动行为,包括增加运动距离、越线次数、平均速度、移动时间和开阔地测试中的绝对转弯角度,减少在倾斜平面上重新定向的时间,减少不动时间。此外,补充 BER 还能增加(p
{"title":"Prepubertal Repeated Berberine Supplementation Enhances Cerebrocerebellar Functions by Modulating Neurochemical and Behavioural Changes in Wistar Rats.","authors":"Solomon Owumi, Joseph Chimezie, Moses Otunla, Bayode Oluwawibe, Harieme Agbarogi, Mayowa Anifowose, Uche Arunsi, Olatunde Owoeye","doi":"10.1007/s12031-024-02250-2","DOIUrl":"https://doi.org/10.1007/s12031-024-02250-2","url":null,"abstract":"<p><p>Antioxidant-rich supplementation plays an essential role in the function of mammals' central nervous system. However, no research has documented the effect of berberine (BER) supplementation on the cerebrocerebellar function of prepubertal rats. The present study was designed to investigate the impact of BER supplementation on neurochemical and behavioural changes in prepubertal male rats. Five groups (90 ± 5 g, n = 7 each) of experimental rats were orally treated with corn oil or different doses of BER (25, 50, 100, and 200 mg/kg bw) from the 28th at 68 post-natal days. On the 69 days of life, animals underwent behavioural assessment in the open field, hanging wire, and negative geotaxis tests. The result revealed that BER administration improved locomotive and motor behaviour by increasing distance travelled, line crossings, average speed, time mobile, and absolute turn angle in open field test and decrease in time to re-orient on an incline plane, a decrease in immobility time relative to the untreated control. Furthermore, BER supplementation increased (p < 0.05) antioxidant enzyme activities such as SOD, CAT, GPx, GSH, and TSH and prevented increases (p < 0.05) in oxidative and inflammatory levels as indicated by decreases in RONS, LPO, XO, carbonyl protein, NO, MPO, and TNF-α compared to the untreated control. BER-treated animals a lessened number of dark-stained Nissl cells compared to the untreated control rats. Our findings revealed that BER minimised neuronal degeneration and lesions, improved animal behaviour, and suppressed oxidative and inflammatory mediators, which may probably occur through its agonistic effect on PPAR-α, PPAR-δ, and PPAR-γ - essential proteins known to resolve inflammation and modulate redox signalling towards antioxidant function.</p>","PeriodicalId":652,"journal":{"name":"Journal of Molecular Neuroscience","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2024-07-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141747082","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Acupuncture Therapy Modulating "Du" Channel Attenuates Ischemic Stroke-induced Disorders by Modulating REST-mediated miR-21/PDCD4 Signaling Transduction. 通过调节REST介导的miR-21/PDCD4信号转导,针灸疗法调节 "杜 "字通道可减轻缺血性脑卒中引起的失调。
IF 2.8 4区 医学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-07-20 DOI: 10.1007/s12031-024-02248-w
Gang Lei, Xiangbo Wu, Shuijie Zhang, Xiaoyun Tong, Gang Zhou

Acupuncture is a traditional Chinese therapy with treating potential against cognitive dysfunction. MicroRNA-21-3p (miR-21-3p) is well characterized for its benefits on neural tissues. The current study hypothesizes that the acupuncture aiming "Du" channel could attenuate IS-induced neural disorders by modulating the function of REST/miR-21-3p axis. Complications associated with IS are induced by a middle cerebral artery occlusion (MCAO) model in vivo. The disorders are then handled with the acupuncture with nimodipine as the positive control. It is found that the acupuncture improved cognitive function, reduced brain apoptosis, and increased the viable neuron number of model rats. Additionally, the production of cytokines is also suppressed by the acupuncture. At the molecular level, the level of miR-21-3p was up-regulated, while the level of REST was down-regulated by the acupuncture. The changes in miR-REST/21-3p contributed to the inhibition of PDCD4. Collectively, the findings in the current study highlight that miR-21-3p is associated with the anti-IS function of the acupuncture, which is mediated by the inhibition of REST.

针灸是一种具有治疗认知功能障碍潜力的传统中医疗法。微RNA-21-3p(miR-21-3p)对神经组织的益处已被证实。本研究假设,针刺 "杜 "字穴可通过调节REST/miR-21-3p轴的功能,减轻IS诱发的神经紊乱。IS相关并发症是由体内大脑中动脉闭塞(MCAO)模型诱发的。然后以尼莫地平为阳性对照,通过针灸治疗这些并发症。结果发现,针灸改善了模型大鼠的认知功能,减少了大脑凋亡,增加了存活神经元的数量。此外,针灸还抑制了细胞因子的产生。在分子水平上,针灸上调了 miR-21-3p 的水平,下调了 REST 的水平。miR-REST/21-3p 的变化有助于抑制 PDCD4。综上所述,本研究的结果表明,miR-21-3p 与针灸的抗 IS 功能有关,而针灸的抗 IS 功能是通过抑制 REST 介导的。
{"title":"Acupuncture Therapy Modulating \"Du\" Channel Attenuates Ischemic Stroke-induced Disorders by Modulating REST-mediated miR-21/PDCD4 Signaling Transduction.","authors":"Gang Lei, Xiangbo Wu, Shuijie Zhang, Xiaoyun Tong, Gang Zhou","doi":"10.1007/s12031-024-02248-w","DOIUrl":"https://doi.org/10.1007/s12031-024-02248-w","url":null,"abstract":"<p><p>Acupuncture is a traditional Chinese therapy with treating potential against cognitive dysfunction. MicroRNA-21-3p (miR-21-3p) is well characterized for its benefits on neural tissues. The current study hypothesizes that the acupuncture aiming \"Du\" channel could attenuate IS-induced neural disorders by modulating the function of REST/miR-21-3p axis. Complications associated with IS are induced by a middle cerebral artery occlusion (MCAO) model in vivo. The disorders are then handled with the acupuncture with nimodipine as the positive control. It is found that the acupuncture improved cognitive function, reduced brain apoptosis, and increased the viable neuron number of model rats. Additionally, the production of cytokines is also suppressed by the acupuncture. At the molecular level, the level of miR-21-3p was up-regulated, while the level of REST was down-regulated by the acupuncture. The changes in miR-REST/21-3p contributed to the inhibition of PDCD4. Collectively, the findings in the current study highlight that miR-21-3p is associated with the anti-IS function of the acupuncture, which is mediated by the inhibition of REST.</p>","PeriodicalId":652,"journal":{"name":"Journal of Molecular Neuroscience","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2024-07-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141730937","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Editorial: The Current Categorical Concept of Schizophrenia is Inadequate: Should we Look at the Current State of Affairs for Compensatory Processes? 社论:精神分裂症的现有分类概念是不恰当的:我们是否应该审视补偿过程的现状?
IF 2.8 4区 医学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-07-18 DOI: 10.1007/s12031-024-02246-y
Joseph Levine, Illana Gozes
{"title":"Editorial: The Current Categorical Concept of Schizophrenia is Inadequate: Should we Look at the Current State of Affairs for Compensatory Processes?","authors":"Joseph Levine, Illana Gozes","doi":"10.1007/s12031-024-02246-y","DOIUrl":"https://doi.org/10.1007/s12031-024-02246-y","url":null,"abstract":"","PeriodicalId":652,"journal":{"name":"Journal of Molecular Neuroscience","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2024-07-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141632265","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Multiple Exposures to Sevoflurane General Anesthesia During Pregnancy Inhibit CaMKII/CREB Axis by Downregulating HCN2 to Induce an Autism-Like Phenotype in Offspring Mice. 孕期多次接触七氟醚全身麻醉会通过下调 HCN2 抑制 CaMKII/CREB 轴,从而诱发后代小鼠的自闭症样表型。
IF 2.8 4区 医学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-07-17 DOI: 10.1007/s12031-024-02243-1
Fusheng Wei, Ting Chen, Yuanlu Huang, Yuxuan Yang, Xiaoe Cheng, Lei Yang

The objective of this investigation was to examine the impact of multiple exposures to general anesthesia (GA) with sevoflurane on the offspring of pregnant mice, as well as to elucidate the underlying mechanism. Neurodevelopmental assessments, including various reflexes and behavioral tests, were conducted on the offspring in the GA group to evaluate neuronal cell development. Furthermore, neonatal mouse neuronal cells were isolated and transfected with a high-expression CREB vector (pcDNA3.1-CREB), followed by treatment with sevoflurane (0.72 mol/L), ZD7288 (50 μmol/L), and KN-62 (10 μmol/L), or a combination of these compounds. The expression of relevant genes was then analyzed using qRT-PCR and western blot techniques. In comparison to the sham group, neonatal mice in the GA group exhibited significantly prolonged latencies in surface righting reflex, geotaxis test, and air righting reflex. Furthermore, there was a notable deceleration in the development of body weight and tail in the GA group. These mice also displayed impairments in social ability, reduced reciprocal social interaction behaviors, diminished learning capacity, and heightened levels of anxious behaviors. Additionally, synaptic trigger malfunction was observed, along with decreased production of c-Fos and neurotrophic factors. Sevoflurane was found to notably decrease cellular c-Fos and neurotrophic factor production, as well as the expression of HCN2 and CaMKII/CREB-related proteins. The inhibitory effects of sevoflurane on HCN2 or CaMKII channels were similar to those observed with ZD7288 or KN-62 inhibition. However, overexpression of CREB mitigated the impact of sevoflurane on neuronal cells. Repetitive exposure to sevoflurane general anesthesia while pregnant suppresses the CaMKII/CREB pathway, leading to the development of autism-like characteristics in offspring mice through the reduction of HCN2 expression.

本研究的目的是探讨多次使用七氟醚全身麻醉(GA)对怀孕小鼠后代的影响,并阐明其潜在机制。对GA组的后代进行了神经发育评估,包括各种反射和行为测试,以评估神经细胞的发育情况。此外,还分离了新生小鼠神经元细胞并用高表达CREB载体(pcDNA3.1-CREB)进行转染,然后用七氟烷(0.72 mol/L)、ZD7288(50 μmol/L)和KN-62(10 μmol/L)或这些化合物的组合进行处理。然后使用 qRT-PCR 和 Western 印迹技术分析相关基因的表达。与假组相比较,GA 组的新生小鼠在体表直立反射、地轴测试和空中直立反射中的潜伏期明显延长。此外,GA 组小鼠的体重和尾巴发育明显减慢。这些小鼠还表现出社交能力受损、互惠社交互动行为减少、学习能力下降以及焦虑行为水平升高。此外,还观察到突触触发功能失常,c-Fos 和神经营养因子的产生减少。研究发现,七氟烷可显著减少细胞中 c-Fos 和神经营养因子的产生,以及 HCN2 和 CaMKII/CREB 相关蛋白的表达。七氟烷对 HCN2 或 CaMKII 通道的抑制作用与 ZD7288 或 KN-62 抑制作用相似。然而,过表达 CREB 可减轻七氟烷对神经元细胞的影响。怀孕期间重复暴露于七氟烷全身麻醉会抑制 CaMKII/CREB 通路,通过减少 HCN2 的表达导致后代小鼠出现类似自闭症的特征。
{"title":"Multiple Exposures to Sevoflurane General Anesthesia During Pregnancy Inhibit CaMKII/CREB Axis by Downregulating HCN2 to Induce an Autism-Like Phenotype in Offspring Mice.","authors":"Fusheng Wei, Ting Chen, Yuanlu Huang, Yuxuan Yang, Xiaoe Cheng, Lei Yang","doi":"10.1007/s12031-024-02243-1","DOIUrl":"https://doi.org/10.1007/s12031-024-02243-1","url":null,"abstract":"<p><p>The objective of this investigation was to examine the impact of multiple exposures to general anesthesia (GA) with sevoflurane on the offspring of pregnant mice, as well as to elucidate the underlying mechanism. Neurodevelopmental assessments, including various reflexes and behavioral tests, were conducted on the offspring in the GA group to evaluate neuronal cell development. Furthermore, neonatal mouse neuronal cells were isolated and transfected with a high-expression CREB vector (pcDNA3.1-CREB), followed by treatment with sevoflurane (0.72 mol/L), ZD7288 (50 μmol/L), and KN-62 (10 μmol/L), or a combination of these compounds. The expression of relevant genes was then analyzed using qRT-PCR and western blot techniques. In comparison to the sham group, neonatal mice in the GA group exhibited significantly prolonged latencies in surface righting reflex, geotaxis test, and air righting reflex. Furthermore, there was a notable deceleration in the development of body weight and tail in the GA group. These mice also displayed impairments in social ability, reduced reciprocal social interaction behaviors, diminished learning capacity, and heightened levels of anxious behaviors. Additionally, synaptic trigger malfunction was observed, along with decreased production of c-Fos and neurotrophic factors. Sevoflurane was found to notably decrease cellular c-Fos and neurotrophic factor production, as well as the expression of HCN2 and CaMKII/CREB-related proteins. The inhibitory effects of sevoflurane on HCN2 or CaMKII channels were similar to those observed with ZD7288 or KN-62 inhibition. However, overexpression of CREB mitigated the impact of sevoflurane on neuronal cells. Repetitive exposure to sevoflurane general anesthesia while pregnant suppresses the CaMKII/CREB pathway, leading to the development of autism-like characteristics in offspring mice through the reduction of HCN2 expression.</p>","PeriodicalId":652,"journal":{"name":"Journal of Molecular Neuroscience","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2024-07-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141625555","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Identification of Potential Biomarkers for Patients with DWI-Negative Ischemic Stroke. 识别 DWI 阴性缺血性脑卒中患者的潜在生物标志物
IF 2.8 4区 医学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-07-12 DOI: 10.1007/s12031-024-02229-z
Lei Li, Ying Wang

Ischemic stroke is the leading cause of long-term disability in adults, accounting for 80% of stroke cases. Diffusion weighted imaging (DWI) examination is the main test for acute ischemic stroke, but in recent years, several studies have shown that some patients show negative DWI examination after the onset of ischemic stroke with symptoms of significant neurological deficits. In this study, we investigated potential biomarkers related to immune metabolism in the peripheral blood of DWI-negative versus DWI-positive patients after ischemic stroke and explored their possible regulatory processes in ischemic stroke. The datasets related to ischemic stroke were downloaded from the GEO database, immune-related genes and metabolism-related genes were obtained from the ImmPort database and MSigDB database, respectively, and immune-related differential genes were obtained based on immune scores using the algorithm of the R software package "GSVA." Candidate genes were selected based on intersections, hub genes were screened using the algorithm in Cytoscape software, and finally, GeneMANIA analysis, GSEA enrichment analysis, subcellular localization, gene transcription factor and gene-drug interaction networks, and disease correlation analyses were performed for the hub genes. Five hub genes (GART, TYMS, PPAT, CTPS1, and PAICS) were obtained by PPI network analysis and software analysis. Among them, PPAT and PAICS may be the real hub genes with consistent and significantly differentiated results from the discovery and validation sets. The functions of these hub genes may be related to pathways such as nucleotide biosynthetic processes. The constructed hub gene ceRNA network showed that hsa-10a-5p is the key miRNA connecting PAICS and multiple lncRNAs in this study. Differential genes related to immunity and metabolism in DWI-negative and DWI-positive patients after IS were identified using bioinformatics analysis, and their pathways and related TF-RNAs, miRNAs, and lncRNAs were identified. These genes may be considered effective targets for the diagnosis and treatment of ischemic stroke.

缺血性卒中是导致成人长期残疾的主要原因,占卒中病例的 80%。弥散加权成像(DWI)检查是急性缺血性脑卒中的主要检查方法,但近年来的一些研究表明,一些患者在缺血性脑卒中发病后出现明显的神经功能缺损症状,但其 DWI 检查结果却是阴性的。本研究调查了缺血性脑卒中后 DWI 阴性与 DWI 阳性患者外周血中与免疫代谢相关的潜在生物标志物,并探讨了它们在缺血性脑卒中中可能的调控过程。缺血性脑卒中相关数据集从 GEO 数据库下载,免疫相关基因和代谢相关基因分别从 ImmPort 数据库和 MSigDB 数据库获取,并使用 R 软件包 "GSVA "的算法根据免疫评分获取免疫相关差异基因。根据交叉点选择候选基因,利用Cytoscape软件中的算法筛选枢纽基因,最后对枢纽基因进行GeneMANIA分析、GSEA富集分析、亚细胞定位、基因转录因子和基因-药物相互作用网络以及疾病相关性分析。通过PPI网络分析和软件分析,得出了五个中心基因(GART、TYMS、PPAT、CTPS1和PAICS)。其中,PPAT和PAICS可能是真正的枢纽基因,它们在发现集和验证集上的结果一致且有显著差异。这些枢纽基因的功能可能与核苷酸生物合成过程等通路有关。构建的中枢基因 ceRNA 网络显示,hsa-10a-5p 是本研究中连接 PAICS 和多个 lncRNA 的关键 miRNA。通过生物信息学分析,发现了IS后DWI阴性和DWI阳性患者中与免疫和代谢相关的差异基因,并确定了其通路和相关的TF-RNA、miRNA和lncRNA。这些基因可能是诊断和治疗缺血性脑卒中的有效靶点。
{"title":"Identification of Potential Biomarkers for Patients with DWI-Negative Ischemic Stroke.","authors":"Lei Li, Ying Wang","doi":"10.1007/s12031-024-02229-z","DOIUrl":"10.1007/s12031-024-02229-z","url":null,"abstract":"<p><p>Ischemic stroke is the leading cause of long-term disability in adults, accounting for 80% of stroke cases. Diffusion weighted imaging (DWI) examination is the main test for acute ischemic stroke, but in recent years, several studies have shown that some patients show negative DWI examination after the onset of ischemic stroke with symptoms of significant neurological deficits. In this study, we investigated potential biomarkers related to immune metabolism in the peripheral blood of DWI-negative versus DWI-positive patients after ischemic stroke and explored their possible regulatory processes in ischemic stroke. The datasets related to ischemic stroke were downloaded from the GEO database, immune-related genes and metabolism-related genes were obtained from the ImmPort database and MSigDB database, respectively, and immune-related differential genes were obtained based on immune scores using the algorithm of the R software package \"GSVA.\" Candidate genes were selected based on intersections, hub genes were screened using the algorithm in Cytoscape software, and finally, GeneMANIA analysis, GSEA enrichment analysis, subcellular localization, gene transcription factor and gene-drug interaction networks, and disease correlation analyses were performed for the hub genes. Five hub genes (GART, TYMS, PPAT, CTPS1, and PAICS) were obtained by PPI network analysis and software analysis. Among them, PPAT and PAICS may be the real hub genes with consistent and significantly differentiated results from the discovery and validation sets. The functions of these hub genes may be related to pathways such as nucleotide biosynthetic processes. The constructed hub gene ceRNA network showed that hsa-10a-5p is the key miRNA connecting PAICS and multiple lncRNAs in this study. Differential genes related to immunity and metabolism in DWI-negative and DWI-positive patients after IS were identified using bioinformatics analysis, and their pathways and related TF-RNAs, miRNAs, and lncRNAs were identified. These genes may be considered effective targets for the diagnosis and treatment of ischemic stroke.</p>","PeriodicalId":652,"journal":{"name":"Journal of Molecular Neuroscience","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2024-07-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11245437/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141589338","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Serum Erythropoietin and Ischemic-Modified Albumin Levels in Adolescents with Obsessive-Compulsive Disorder. 青少年强迫症患者的血清促红细胞生成素和缺血修饰白蛋白水平。
IF 2.8 4区 医学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-07-12 DOI: 10.1007/s12031-024-02247-x
Masum Öztürk, Fatma Subaşı Turgut, Davut Akbalık, Mustafa Erhan Demirkıran, İbrahim Kaplan

Erythropoietin (EPO) has neuroprotective effects by increasing oxidative stress resistance and stabilizing redox balance. Ischemic-modified albumin (IMA) is a product of protein oxidation, and recent evidence suggests that IMA can be used as an indicator of oxidative damage. This study aimed to investigate serum EPO and IMA levels in obsessive-compulsive disorder (OCD) patients and to investigate the relationship between EPO and IMA levels and clinical variables such as disease duration and disease severity. A total of 68 adolescents (11-18 years old), including 35 OCD patients (18 males/17 females) and 33 healthy controls (14 males/19 females) without comorbid disorders matched for age, gender, and BMI, were included in the study. The enzyme-amplified chemiluminescence technique determined serum EPO levels, and serum IMA levels were determined by the spectrophotometric method. Serum EPO levels were lower in OCD patients compared to healthy controls (p = 0.002; Z =  - 3.123), and serum IMA levels (ABSU) were significantly higher in the OCD group (p = 0.005). A significant positive correlation was found between IMA levels and the duration of OCD symptoms (p = 0.015, r = 0.409). The study's findings contribute to the growing body of evidence implicating inflammatory and oxidative processes in the pathogenesis of OCD. The potential of EPO and IMA levels as diagnostic biomarkers for OCD aligns with the ongoing efforts to identify reliable biological markers for the disorder. The positive correlation of IMA levels with the duration of OCD shows the importance of early detection of oxidative damage.

促红细胞生成素(EPO)可增强抗氧化应激能力并稳定氧化还原平衡,从而起到保护神经的作用。缺血修饰白蛋白(IMA)是蛋白质氧化的产物,最近的证据表明,IMA可作为氧化损伤的指标。本研究旨在调查强迫症(OCD)患者的血清 EPO 和 IMA 水平,并研究 EPO 和 IMA 水平与病程和疾病严重程度等临床变量之间的关系。研究共纳入了 68 名青少年(11-18 岁),包括 35 名强迫症患者(18 名男性/17 名女性)和 33 名无合并症的健康对照组(14 名男性/19 名女性)(年龄、性别和体重指数均匹配)。采用酶扩增化学发光技术测定血清 EPO 水平,采用分光光度法测定血清 IMA 水平。与健康对照组相比,强迫症患者的血清 EPO 水平较低(p = 0.002;Z = - 3.123),而强迫症组的血清 IMA 水平(ABSU)明显较高(p = 0.005)。IMA水平与强迫症症状持续时间之间存在明显的正相关(p = 0.015,r = 0.409)。越来越多的证据表明,炎症和氧化过程与强迫症的发病机制有关。EPO和IMA水平有可能成为强迫症的诊断生物标志物,这与目前为确定强迫症的可靠生物标志物所做的努力不谋而合。IMA 水平与强迫症持续时间的正相关性表明了早期检测氧化损伤的重要性。
{"title":"Serum Erythropoietin and Ischemic-Modified Albumin Levels in Adolescents with Obsessive-Compulsive Disorder.","authors":"Masum Öztürk, Fatma Subaşı Turgut, Davut Akbalık, Mustafa Erhan Demirkıran, İbrahim Kaplan","doi":"10.1007/s12031-024-02247-x","DOIUrl":"10.1007/s12031-024-02247-x","url":null,"abstract":"<p><p>Erythropoietin (EPO) has neuroprotective effects by increasing oxidative stress resistance and stabilizing redox balance. Ischemic-modified albumin (IMA) is a product of protein oxidation, and recent evidence suggests that IMA can be used as an indicator of oxidative damage. This study aimed to investigate serum EPO and IMA levels in obsessive-compulsive disorder (OCD) patients and to investigate the relationship between EPO and IMA levels and clinical variables such as disease duration and disease severity. A total of 68 adolescents (11-18 years old), including 35 OCD patients (18 males/17 females) and 33 healthy controls (14 males/19 females) without comorbid disorders matched for age, gender, and BMI, were included in the study. The enzyme-amplified chemiluminescence technique determined serum EPO levels, and serum IMA levels were determined by the spectrophotometric method. Serum EPO levels were lower in OCD patients compared to healthy controls (p = 0.002; Z =  - 3.123), and serum IMA levels (ABSU) were significantly higher in the OCD group (p = 0.005). A significant positive correlation was found between IMA levels and the duration of OCD symptoms (p = 0.015, r = 0.409). The study's findings contribute to the growing body of evidence implicating inflammatory and oxidative processes in the pathogenesis of OCD. The potential of EPO and IMA levels as diagnostic biomarkers for OCD aligns with the ongoing efforts to identify reliable biological markers for the disorder. The positive correlation of IMA levels with the duration of OCD shows the importance of early detection of oxidative damage.</p>","PeriodicalId":652,"journal":{"name":"Journal of Molecular Neuroscience","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2024-07-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11245444/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141589339","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Regulation of MicroRNAs After Spinal Cord Injury in Adult Zebrafish. 成年斑马鱼脊髓损伤后的微RNA调控
IF 2.8 4区 医学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-07-11 DOI: 10.1007/s12031-024-02242-2
Wenyuan Shen, Jun Cai, Jinze Li, Wenchang Li, Pengcheng Shi, Xiumei Zhao, Shiqing Feng

Spinal cord injury (SCI) is a central nerve injury that often leads to loss of motor and sensory functions at or below the level of the injury. Zebrafish have a strong ability to repair after SCI, but the role of microRNAs (miRNAs) after SCI remains unclear. Locomotor behavior analysis showed that adult zebrafish recovered about 30% of their motor ability at 2 weeks and 55% at 3 weeks after SCI, reflecting their strong ability to repair SCI. Through miRNA sequencing, mRNA sequencing, RT-qPCR experiment verification, and bioinformatics predictive analysis, the key miRNAs and related genes in the repair of SCI were screened. A total of 38 miRNAs were significantly different, the top ten miRNAs were verified by RT-qPCR. The prediction target genes were verified by the mRNAs sequencing results at the same time point. Finally, 182 target genes were identified as likely to be networked regulated by the 38 different miRNAs. GO and KEGG enrichment analysis found that miRNAs targeted gene regulation of many key pathways, such as membrane tissue transport, ribosome function, lipid binding, and peroxidase activity. The PPI network analysis showed that miRNAs were involved in SCI repair through complex network regulation, among which dre-miR-21 may enhance cell reversibility through nop56, and that dre-miR-125c regulates axon growth through kpnb1 to repair SCI.

脊髓损伤(SCI)是一种中枢神经损伤,通常会导致损伤部位或损伤部位以下的运动和感觉功能丧失。斑马鱼在脊髓损伤后有很强的修复能力,但微小RNA(miRNA)在脊髓损伤后的作用仍不清楚。运动行为分析表明,成年斑马鱼在损伤后2周和3周分别恢复了约30%和55%的运动能力,这反映了斑马鱼具有很强的损伤修复能力。通过miRNA测序、mRNA测序、RT-qPCR实验验证和生物信息学预测分析,筛选出修复SCI的关键miRNA和相关基因。共有 38 个 miRNA 存在显著差异,前 10 个 miRNA 已通过 RT-qPCR 验证。预测的靶基因由同一时间点的 mRNAs 测序结果验证。最后,确定了 182 个可能受 38 种不同 miRNA 网络调控的靶基因。GO和KEGG富集分析发现,miRNAs靶向调控了许多关键通路的基因,如膜组织转运、核糖体功能、脂质结合和过氧化物酶活性等。PPI网络分析显示,miRNA通过复杂的网络调控参与SCI修复,其中dre-miR-21可通过nop56增强细胞可逆性,dre-miR-125c可通过kpnb1调控轴突生长以修复SCI。
{"title":"Regulation of MicroRNAs After Spinal Cord Injury in Adult Zebrafish.","authors":"Wenyuan Shen, Jun Cai, Jinze Li, Wenchang Li, Pengcheng Shi, Xiumei Zhao, Shiqing Feng","doi":"10.1007/s12031-024-02242-2","DOIUrl":"https://doi.org/10.1007/s12031-024-02242-2","url":null,"abstract":"<p><p>Spinal cord injury (SCI) is a central nerve injury that often leads to loss of motor and sensory functions at or below the level of the injury. Zebrafish have a strong ability to repair after SCI, but the role of microRNAs (miRNAs) after SCI remains unclear. Locomotor behavior analysis showed that adult zebrafish recovered about 30% of their motor ability at 2 weeks and 55% at 3 weeks after SCI, reflecting their strong ability to repair SCI. Through miRNA sequencing, mRNA sequencing, RT-qPCR experiment verification, and bioinformatics predictive analysis, the key miRNAs and related genes in the repair of SCI were screened. A total of 38 miRNAs were significantly different, the top ten miRNAs were verified by RT-qPCR. The prediction target genes were verified by the mRNAs sequencing results at the same time point. Finally, 182 target genes were identified as likely to be networked regulated by the 38 different miRNAs. GO and KEGG enrichment analysis found that miRNAs targeted gene regulation of many key pathways, such as membrane tissue transport, ribosome function, lipid binding, and peroxidase activity. The PPI network analysis showed that miRNAs were involved in SCI repair through complex network regulation, among which dre-miR-21 may enhance cell reversibility through nop56, and that dre-miR-125c regulates axon growth through kpnb1 to repair SCI.</p>","PeriodicalId":652,"journal":{"name":"Journal of Molecular Neuroscience","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2024-07-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141578652","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Exploratory Mass Spectrometry of Cerebrospinal Fluid from Persons with Autopsy-Confirmed LATE-NC. 对尸检确诊的晚期北卡罗来纳州患者脑脊液进行探索性质谱分析。
IF 2.8 4区 医学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-07-10 DOI: 10.1007/s12031-024-02239-x
Jozsef Gal, Calvin Vary, Carlos A Gartner, Gregory A Jicha, Erin L Abner, Yulica S Ortega, Ibrahim Choucair, Donna M Wilcock, Ruth S Nelson, Peter T Nelson

Common neuropathologies associated with dementia include Alzheimer's disease neuropathologic change (ADNC) and limbic-predominant age-related TDP-43 encephalopathy neuropathologic change (LATE-NC). Biofluid proteomics provides a window into the pathobiology of dementia and the information from biofluid tests may help guide clinical management. Participants (n = 29) had been autopsied and had antemortem CSF draws in a longitudinal cohort of older adults at the University of Kentucky AD Research Center. Cases were designated as LATE-NC + if they had LATE-NC stage > 1 (n = 9); the remaining 20 cases were designated LATE-NC-. This convenience sample of CSF specimens was analyzed in two separate processes: From one group, aliquots were depleted of highly abundant proteins using affinity spin columns. Tryptic digests of sample proteins were subjected to liquid chromatographic separation and mass spectrometry. Relative quantification was performed using Sciex software. Peptides referent to a total of 949 proteins were identified in the samples depleted of abundant proteins, and 820 different proteins were identified in the non-depleted samples. When the Bonferroni/false-discovery statistical correction was applied to account for having made multiple comparison tests, only 4 proteins showed differential expression (LATE-NC + vs LATE-NC-) in the non-depleted samples (RBP4, MIF, IGHG3, and ITM2B). Post hoc western blots confirmed that RBP4 expression was higher in the LATE-NC + cases at the group level. In summary, an exploratory assessment of proteomes of autopsy-confirmed LATE-NC and non-LATE-NC CSF did not demonstrate a clear-cut proteomic fingerprint that distinguished the two groups. There was, however, an increase in RBP4 protein levels in CSF from LATE-NC cases.

与痴呆症相关的常见神经病理变化包括阿尔茨海默病神经病理变化(ADNC)和边缘系统为主的年龄相关 TDP-43 脑病神经病理变化(LATE-NC)。生物流体蛋白质组学为了解痴呆症的病理生物学提供了一个窗口,生物流体检测的信息有助于指导临床治疗。肯塔基大学老年痴呆症研究中心(University of Kentucky AD Research Center)的老年人纵向队列中的参与者(n = 29)均接受过尸检,并在死前提取了脑脊液。如果病例的 LATE-NC 阶段大于 1(n = 9),则将其命名为 LATE-NC +;其余 20 个病例命名为 LATE-NC-。对这一方便取样的 CSF 标本进行了两个不同的分析过程:其中一组样本的等分样品使用亲和旋柱去除高含量蛋白质。对样本蛋白质的胰蛋白酶消化物进行液相色谱分离和质谱分析。使用 Sciex 软件进行相对定量。在去除了高含量蛋白质的样本中,共鉴定出 949 种蛋白质的肽段,而在未去除了高含量蛋白质的样本中,则鉴定出 820 种不同的蛋白质。当应用 Bonferroni/false-discovery 统计校正以考虑多重比较测试时,只有 4 种蛋白质(RBP4、MIF、IGHG3 和 ITM2B)在非耗尽样本中显示出差异表达(LATE-NC + vs LATE-NC-)。事后的 Western 印迹证实,在 LATE-NC + 病例组中,RBP4 的表达较高。总之,对尸检证实的 LATE-NC 和非 LATE-NC CSF 蛋白质组的探索性评估并未显示出区分两组的明确蛋白质组指纹。不过,LATE-NC病例CSF中的RBP4蛋白水平有所增加。
{"title":"Exploratory Mass Spectrometry of Cerebrospinal Fluid from Persons with Autopsy-Confirmed LATE-NC.","authors":"Jozsef Gal, Calvin Vary, Carlos A Gartner, Gregory A Jicha, Erin L Abner, Yulica S Ortega, Ibrahim Choucair, Donna M Wilcock, Ruth S Nelson, Peter T Nelson","doi":"10.1007/s12031-024-02239-x","DOIUrl":"10.1007/s12031-024-02239-x","url":null,"abstract":"<p><p>Common neuropathologies associated with dementia include Alzheimer's disease neuropathologic change (ADNC) and limbic-predominant age-related TDP-43 encephalopathy neuropathologic change (LATE-NC). Biofluid proteomics provides a window into the pathobiology of dementia and the information from biofluid tests may help guide clinical management. Participants (n = 29) had been autopsied and had antemortem CSF draws in a longitudinal cohort of older adults at the University of Kentucky AD Research Center. Cases were designated as LATE-NC + if they had LATE-NC stage > 1 (n = 9); the remaining 20 cases were designated LATE-NC-. This convenience sample of CSF specimens was analyzed in two separate processes: From one group, aliquots were depleted of highly abundant proteins using affinity spin columns. Tryptic digests of sample proteins were subjected to liquid chromatographic separation and mass spectrometry. Relative quantification was performed using Sciex software. Peptides referent to a total of 949 proteins were identified in the samples depleted of abundant proteins, and 820 different proteins were identified in the non-depleted samples. When the Bonferroni/false-discovery statistical correction was applied to account for having made multiple comparison tests, only 4 proteins showed differential expression (LATE-NC + vs LATE-NC-) in the non-depleted samples (RBP4, MIF, IGHG3, and ITM2B). Post hoc western blots confirmed that RBP4 expression was higher in the LATE-NC + cases at the group level. In summary, an exploratory assessment of proteomes of autopsy-confirmed LATE-NC and non-LATE-NC CSF did not demonstrate a clear-cut proteomic fingerprint that distinguished the two groups. There was, however, an increase in RBP4 protein levels in CSF from LATE-NC cases.</p>","PeriodicalId":652,"journal":{"name":"Journal of Molecular Neuroscience","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2024-07-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141578632","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Investigation of the Circular Transcriptome in Alzheimer's Disease Brain. 阿尔茨海默氏症大脑环形转录组研究
IF 2.8 4区 医学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-07-09 DOI: 10.1007/s12031-024-02236-0
Yulan Gao, Si-Mei Xu, Yuning Cheng, Konii Takenaka, Grace Lindner, Michael Janitz

Circular RNAs (circRNAs) are a subclass of non-coding RNAs which have demonstrated potential as biomarkers for Alzheimer's disease (AD). In this study, we conducted a comprehensive exploration of the circRNA transcriptome within AD brain tissues. Specifically, we assessed circRNA expression patterns in the dorsolateral prefrontal cortex collected from nine AD-afflicted individuals and eight healthy controls. Utilising two circRNA detection tools, CIRI2 and CIRCexplorer2, we detected thousands of circRNAs and performed a differential expression analysis. CircRNAs which exhibited statistically significantly differential expression were identified as AD-specific differentially expressed circRNAs. Notably, our investigation revealed 120 circRNAs with significant upregulation and 1325 circRNAs displaying significant downregulation in AD brains when compared to healthy brain tissue. Additionally, we explored the expression profiles of the linear RNA counterparts corresponding to differentially expressed circRNAs in AD-afflicted brains and discovered that the linear RNA counterparts exhibited no significant changes in the levels of expression. We used CRAFT tool to predict that circUBE4B had potential to target miRNA named as hsa-miR-325-5p, ultimately regulated CD44 gene. This study provides a comprehensive overview of differentially expressed circRNAs in the context of AD brains, underscoring their potential as molecular biomarkers for AD. These findings significantly enhance our comprehension of AD's underlying pathophysiological mechanisms, offering promising avenues for future diagnostic and therapeutic developments.

环状 RNA(circRNA)是非编码 RNA 的一个亚类,已被证明具有作为阿尔茨海默病(AD)生物标志物的潜力。在这项研究中,我们对AD脑组织中的circRNA转录组进行了全面探索。具体来说,我们评估了从九名阿兹海默症患者和八名健康对照者身上收集的背外侧前额叶皮层中的 circRNA 表达模式。利用 CIRI2 和 CIRCexplorer2 这两种 circRNA 检测工具,我们检测了数千个 circRNA,并进行了差异表达分析。在统计学上表现出显著差异表达的循环RNA被确定为AD特异性差异表达循环RNA。值得注意的是,我们的研究发现,与健康脑组织相比,AD 大脑中有 120 个 circRNA 明显上调,1325 个 circRNA 明显下调。此外,我们还研究了与AD患者大脑中差异表达的circRNA相对应的线性RNA的表达谱,发现线性RNA的表达水平没有明显变化。我们利用 CRAFT 工具预测,circUBE4B 有可能靶向名为 hsa-miR-325-5p 的 miRNA,最终调控 CD44 基因。这项研究全面概述了在 AD 大脑中不同表达的 circRNA,强调了它们作为 AD 分子生物标记物的潜力。这些发现大大提高了我们对AD潜在病理生理机制的理解,为未来的诊断和治疗发展提供了前景广阔的途径。
{"title":"Investigation of the Circular Transcriptome in Alzheimer's Disease Brain.","authors":"Yulan Gao, Si-Mei Xu, Yuning Cheng, Konii Takenaka, Grace Lindner, Michael Janitz","doi":"10.1007/s12031-024-02236-0","DOIUrl":"10.1007/s12031-024-02236-0","url":null,"abstract":"<p><p>Circular RNAs (circRNAs) are a subclass of non-coding RNAs which have demonstrated potential as biomarkers for Alzheimer's disease (AD). In this study, we conducted a comprehensive exploration of the circRNA transcriptome within AD brain tissues. Specifically, we assessed circRNA expression patterns in the dorsolateral prefrontal cortex collected from nine AD-afflicted individuals and eight healthy controls. Utilising two circRNA detection tools, CIRI2 and CIRCexplorer2, we detected thousands of circRNAs and performed a differential expression analysis. CircRNAs which exhibited statistically significantly differential expression were identified as AD-specific differentially expressed circRNAs. Notably, our investigation revealed 120 circRNAs with significant upregulation and 1325 circRNAs displaying significant downregulation in AD brains when compared to healthy brain tissue. Additionally, we explored the expression profiles of the linear RNA counterparts corresponding to differentially expressed circRNAs in AD-afflicted brains and discovered that the linear RNA counterparts exhibited no significant changes in the levels of expression. We used CRAFT tool to predict that circUBE4B had potential to target miRNA named as hsa-miR-325-5p, ultimately regulated CD44 gene. This study provides a comprehensive overview of differentially expressed circRNAs in the context of AD brains, underscoring their potential as molecular biomarkers for AD. These findings significantly enhance our comprehension of AD's underlying pathophysiological mechanisms, offering promising avenues for future diagnostic and therapeutic developments.</p>","PeriodicalId":652,"journal":{"name":"Journal of Molecular Neuroscience","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2024-07-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11233389/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141562338","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Journal of Molecular Neuroscience
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1