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Correction: The Combination of 5-FU and Resveratrol Can Suppress the Growth of Glioblastoma Cells through Downregulation of TRPM2 and β-Catenin 更正:5-FU和白藜芦醇联用可通过下调TRPM2和β-Catenin抑制胶质母细胞瘤细胞的生长
IF 2.8 4区 医学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-02-16 DOI: 10.1007/s12031-024-02198-3
Farzaneh Aghababaei, Majid Nejati, Hadi Karami, Maryam Darvish, Hamed Mirzaei
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引用次数: 0
Generation of Functional and Mature Sympathetic Neurons from Human Pluripotent Stem Cells via a Neuroepithelial Route 通过神经上皮途径从人类多能干细胞生成功能性成熟交感神经元
IF 2.8 4区 医学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-02-15 DOI: 10.1007/s12031-024-02196-5
Yubao Fan, Shanshan Huang, Fugui Li, Xiyu Zhang, Xueying Huang, Weiqiang Li, Jixiao Zeng, Weijia Wang, Jia Liu

The sympathetic nervous system (SNS) is a crucial branch of the autonomic nervous system (ANS) that is responsible for regulating visceral function and various physiological processes. Dysfunction of the SNS can lead to various diseases, such as hypertension and metabolic disorders. However, obtaining sympathetic neurons from human tissues for research is challenging. The current research aimed at recapitulating the process of human sympathetic neuron development and achieved the successful establishment of a stepwise, highly efficient in vitro differentiation protocol. This protocol facilitated the generation of functional and mature sympathetic neurons from human pluripotent stem cells (hPSCs) using a chemical-defined induction medium. Initially, each differentiation stage was refined to derive sympathoadrenal progenitors (SAPs) from hPSCs through neural epithelial cells (NECs) and trunk neural crest stem cells (NCSCs). hPSC-derived SAPs could be expanded in vitro for at least 12 passages while maintaining the expression of SAP-specific transcription factors and neuronal differentiation potency. SAPs readily generated functional sympathetic neurons (SymNs) when cultured in the neuronal maturation medium for 3–4 weeks. These SymNs expressed sympathetic markers, exhibited electrophysiological properties, and secreted sympathetic neurotransmitters. More importantly, we further demonstrated that hPSC-derived SymNs can efficiently regulate the adipogenesis of human adipose–derived stem cells (ADSCs) and lipid metabolism in vitro. In conclusion, our study provided a simple and robust protocol for generating functional sympathetic neurons from hPSCs, which may be an invaluable tool in unraveling the mechanisms of SNS-related diseases.

交感神经系统(SNS)是自律神经系统(ANS)的一个重要分支,负责调节内脏功能和各种生理过程。交感神经系统功能失调可导致各种疾病,如高血压和代谢紊乱。然而,从人体组织中获取交感神经元用于研究具有挑战性。目前的研究旨在重现人类交感神经元的发育过程,并成功建立了一个逐步、高效的体外分化方案。该方案使用化学定义的诱导培养基,促进了从人类多能干细胞(hPSCs)中生成功能性成熟交感神经元。最初,通过神经上皮细胞(NECs)和主干神经嵴干细胞(NCSCs)对每个分化阶段进行细化,从hPSCs中衍生出交感肾上腺祖细胞(SAPs)。hPSC衍生的SAPs可在体外扩增至少12次,同时保持SAP特异性转录因子的表达和神经元分化效力。在神经元成熟培养基中培养 3-4 周后,SAP 很容易产生功能性交感神经元(SymNs)。这些交感神经元表达交感神经标志物,表现出电生理特性,并分泌交感神经递质。更重要的是,我们进一步证实了源于hPSC的SymNs能有效调节体外人脂肪干细胞(ADSCs)的脂肪生成和脂质代谢。总之,我们的研究为从hPSCs产生功能性交感神经元提供了一个简单而稳健的方案,这可能是揭示SNS相关疾病机制的一个宝贵工具。
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引用次数: 0
Molecular Determinants of Neurocognitive Deficits in Glioma: Based on 2021 WHO Classification 胶质瘤神经认知缺陷的分子决定因素:基于 2021 年世界卫生组织分类。
IF 2.8 4区 医学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-02-05 DOI: 10.1007/s12031-023-02173-4
Kun Zhang, Tianrui Yang, Yu Xia, Xiaopeng Guo, Wenlin Chen, Lijun Wang, Junlin Li, Jiaming Wu, Zhiyuan Xiao, Xin Zhang, Wenwen Jiang, Dongrui Xu, Siying Guo, Yaning Wang, Yixin Shi, Delin Liu, Yilin Li, Yuekun Wang, Hao Xing, Tingyu Liang, Pei Niu, Hai Wang, Qianshu Liu, Shanmu Jin, Tian Qu, Huanzhang Li, Yi Zhang, Wenbin Ma, Yu Wang

Cognitive impairment is a common feature among patients with diffuse glioma. The objective of the study is to investigate the relationship between preoperative cognitive function and clinical as well as molecular factors, firstly based on the new 2021 World Health Organization’s updated classification of central nervous system tumors. A total of 110 diffuse glioma patients enrolled underwent preoperative cognitive assessments using the Mini-Mental State Examination and Montreal Cognitive Assessment. Clinical information was collected from medical records, and gene sequencing was performed to analyze the 18 most influenced genes. The differences in cognitive function between patients with and without glioblastoma were compared under both the 2016 and 2021 WHO classification of tumors of the central nervous system to assess their effect of differentiation on cognition. The study found that age, tumor location, and glioblastoma had significant differences in cognitive function. Several genetic alterations were significantly correlated with cognition. Especially, IDH, CIC, and ATRX are positively correlated with several cognitive domains, while most other genes are negatively correlated. For most focused genes, patients with a low number of genetic alterations tended to have better cognitive function. Our study suggested that, in addition to clinical characteristics such as age, histological type, and tumor location, molecular characteristics play a crucial role in cognitive function. Further research into the mechanisms by which tumors affect brain function is expected to enhance the quality of life for glioma patients. This study highlights the importance of considering both clinical and molecular factors in the management of glioma patients to improve cognitive outcomes.

认知障碍是弥漫性胶质瘤患者的常见特征。本研究旨在研究术前认知功能与临床及分子因素之间的关系,首先基于世界卫生组织2021年更新的中枢神经系统肿瘤分类。共有110名弥漫性胶质瘤患者接受了术前认知评估,评估采用的是迷你精神状态检查和蒙特利尔认知评估。研究人员从病历中收集了临床信息,并对受影响最大的18个基因进行了基因测序分析。根据2016年和2021年世界卫生组织对中枢神经系统肿瘤的分类,比较了胶质母细胞瘤患者和非胶质母细胞瘤患者认知功能的差异,以评估其分化对认知的影响。研究发现,年龄、肿瘤位置和胶质母细胞瘤对认知功能有显著差异。一些基因改变与认知能力有明显相关性。尤其是IDH、CIC和ATRX与多个认知领域呈正相关,而其他大多数基因则呈负相关。就大多数重点基因而言,基因改变数量少的患者往往具有更好的认知功能。我们的研究表明,除了年龄、组织学类型和肿瘤位置等临床特征外,分子特征在认知功能中也起着至关重要的作用。进一步研究肿瘤影响脑功能的机制有望提高胶质瘤患者的生活质量。这项研究强调了在管理胶质瘤患者时同时考虑临床和分子因素以改善认知结果的重要性。
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引用次数: 0
The Role of Serum Matrix Metalloproteinase-9 as a Predictor of Delayed Cerebral Ischemia in Patients with Aneurysmal Subarachnoid Hemorrhage 动脉瘤性蛛网膜下腔出血患者血清基质金属蛋白酶-9对延迟性脑缺血的预测作用
IF 2.8 4区 医学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-02-05 DOI: 10.1007/s12031-024-02194-7
Vinitha Narayan, Munish Kumar, Shalvi Mahajan, Venkata Ganesh, Ankur Luthra, Tulika Gupta, Amit Rawat, Apinderpreet Singh, Sameer Vyas, Vidhya Narayanan, Aparna Depuru, Kirandeep Kaur, Nidhi Panda, Hemant Bhagat

Delayed cerebral ischemia (DCI) is one of the major causes of a poor neurological outcome following aneurysmal subarachnoid hemorrhage (aSAH). Several biomarkers, including matrix metalloproteinase-9 (MMP-9), have been evaluated to predict the development of DCI for timely management. This prospective cohort study was done on 98 patients with aSAH presenting within 72 h of the ictus. Serum samples were collected preoperatively, 7 days after ictus, 10 days after ictus, or when the patient developed DCI, whichever was earlier. The primary objective was to correlate the serum MMP-9 levels with the development of DCI. The secondary objectives were to correlate the serum MMP-9 levels with sonographic vasospasm and the neurological outcome. There was no correlation between the serum MMP-9 levels and the development of DCI (p = 0.37). Similarly, there was no correlation between the serum MMP-9 levels and the sonographic vasospasm (0.05) nor with the modified Rankin Scale (mRS) at discharge (p = 0.27), mRS at 3 months (p = 0.22), and Glasgow Outcome Scale Extended (GOSE) at 3 months (p = 0.15). Serum MMP-9 levels do not predict the development of DCI following aSAH.

延迟性脑缺血(DCI)是动脉瘤性蛛网膜下腔出血(aSAH)后神经系统预后不良的主要原因之一。包括基质金属蛋白酶-9(MMP-9)在内的几种生物标志物已被评估用于预测 DCI 的发展,以便及时处理。这项前瞻性队列研究的对象是 98 名在发病后 72 小时内就诊的 aSAH 患者。血清样本在术前、发病后 7 天、发病后 10 天或患者出现 DCI 时采集,以时间在前者为准。首要目标是将血清 MMP-9 水平与 DCI 的发生相关联。次要目标是将血清 MMP-9 水平与声像图血管痉挛和神经功能预后相关联。血清 MMP-9 水平与 DCI 的发生没有相关性(p = 0.37)。同样,血清MMP-9水平与声像图血管痉挛(0.05)、出院时的改良Rankin量表(mRS)(p = 0.27)、3个月时的mRS(p = 0.22)和3个月时的格拉斯哥结果量表扩展版(GOSE)(p = 0.15)之间也没有相关性。血清 MMP-9 水平不能预测急性脑梗死后 DCI 的发生。
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引用次数: 0
Whole Blood Transcriptome Analysis in Patients with Trigeminal Neuralgia: a Prospective Clinical Study 三叉神经痛患者全血转录组分析:一项前瞻性临床研究
IF 2.8 4区 医学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-02-01 DOI: 10.1007/s12031-024-02195-6
Tianyu Liu, Chao Xu, Jiaqi Guo, Zile He, Yunpeng Zhang, Yi Feng

Trigeminal neuralgia (TN) brings a huge burden to patients, without long-term effective treatment. This study aimed to explore the differentially expressed genes (DEGs) and related enrichment pathways in patients with TN. This was a study of transcriptome sequencing and bioinformatics analysis of human samples. Whole blood samples were collected from the TN patients and pain-free controls. RNA was extracted to conduct the RNA-sequencing and the subsequent bioinformatics analysis. DEGs between the two groups were derived. Kyoto encyclopedia of genes and genomes (KEGG) and Gene ontology (GO) was used to find the enrichment pathways of DEGs. Protein protein interaction (PPI) network was used to depict the interaction between DEGs and find the most important gene, hub gene. Compared with the control group, there were 117 up-regulated DEGs and 103 down-regulated DEGs in the whole blood of patients in the TN group. Pathway enrichment analysis showed that DEGs were mainly enriched in the neuroimmune and metabolic pathways. The PPI network demonstrated that colony stimulating factor 2 (CSF2) was the most important hub gene in the whole blood of TN patients. This study shows the expression of the transcriptome in the whole blood samples of TN patients. The neuroimmune responses and key hub gene CSF2 in the whole blood cells play a vital role in the occurrence of TN. Our research provides a theoretical basis for the diagnosis and treatments of TN. This study was registered at clinicaltrials.gov in June 2021 (No. NCT04923399).

三叉神经痛(TN)给患者带来了巨大的负担,却得不到长期有效的治疗。本研究旨在探索三叉神经痛患者的差异表达基因(DEGs)及相关富集通路。这是一项对人体样本进行转录组测序和生物信息学分析的研究。研究采集了 TN 患者和无痛对照组的全血样本。提取 RNA 进行 RNA 测序和随后的生物信息学分析。得出了两组之间的 DEGs。利用京都基因和基因组百科全书(KEGG)和基因本体论(GO)找出 DEGs 的富集途径。蛋白质相互作用(PPI)网络用于描述 DEGs 之间的相互作用,并找到最重要的基因、枢纽基因。与对照组相比,TN 组患者全血中有 117 个 DEGs 上调,103 个 DEGs 下调。通路富集分析表明,DEGs主要富集在神经免疫和代谢通路中。PPI网络显示,集落刺激因子2(CSF2)是TN患者全血中最重要的枢纽基因。本研究显示了 TN 患者全血样本中转录组的表达情况。全血细胞中的神经免疫反应和关键枢纽基因CSF2在TN的发生中起着至关重要的作用。我们的研究为 TN 的诊断和治疗提供了理论依据。本研究于2021年6月在clinicaltrials.gov上注册(编号:NCT04923399)。
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引用次数: 0
Longitudinal Genotype-Phenotype (Vineland Questionnaire) Characterization of 15 ADNP Syndrome Cases Highlights Mutated Protein Length and Structural Characteristics Correlation with Communicative Abilities Accentuated in Males 15 例 ADNP 综合征病例的纵向基因型-表型(文兰省问卷调查)特征突显了变异蛋白质长度和结构特征与男性交流能力的相关性。
IF 2.8 4区 医学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-01-29 DOI: 10.1007/s12031-024-02189-4
Jospeh Levine, Alexandra Lobyntseva, Shula Shazman, Fahed Hakim, Illana Gozes

Activity-dependent neuroprotective protein (ADNP) is essential for neurodevelopment and de novo mutations in ADNP cause the ADNP syndrome. From brain pathologies point of view, tauopathy has been demonstrated at a young age, implying stunted development coupled with early/accelerated neurodegeneration. Given potential genotype–phenotype differences and age-dependency, we have assessed here a cohort of 15 individuals (1–27-year-old), using 1–3 longitudinal parent (caretaker) interview/s (Vineland 3 questionnaire) over several years. Our results indicated developmental delays, or even developmental arrests, coupled with potential spurts of development at early ages. Severe outcomes correlated with the truncating high impact mutation, in other words, the remaining mutated protein length as well as with the tested individual age, corroborating the hypothesis of developmental delays coupled with accelerated aging. A significant correlation was noted between mutated protein length and communication, implying a high impact of ADNP on communicative skills. Additionally, correlations were discovered between the two previously described epi-genetic signatures in ADNP emphasizing aberrant acquisition of motor behaviors, with truncating mutations around the nuclear localization signal being mostly affected. Finally, all individuals seem to acquire an age equivalent of 1–6 years, requiring disease modification treatment, such as the ADNP-derived drug candidate, NAP (davunetide), which has recently shown efficacy in women suffering from the neurodegenerative disorder, progressive supranuclear palsy (PSP), a late-onset tauopathy.

活动依赖性神经保护蛋白(ADNP)对神经发育至关重要,ADNP的新生突变会导致ADNP综合征。从大脑病理学的角度来看,tauopathy 在年轻时就已被证实,这意味着发育迟缓与早期/加速的神经退行性变相结合。考虑到潜在的基因型-表型差异和年龄依赖性,我们在此对 15 名患者(1-27 岁)进行了群组评估,采用了 1-3 次家长(看护人)纵向访谈(维尼兰 3 问卷),历时数年。我们的研究结果表明,这些儿童发育迟缓,甚至发育停滞,但在幼年时期可能会有突飞猛进的发展。严重后果与截短的高影响突变(换句话说,剩余的突变蛋白长度)以及受测者的年龄相关,证实了发育迟缓与加速衰老的假设。突变蛋白长度与沟通能力之间存在明显的相关性,这意味着 ADNP 对沟通能力的影响很大。此外,研究还发现,ADNP 的两个先前描述的表观遗传特征之间存在相关性,这两个特征都强调运动行为的异常获得,而核定位信号周围的截短突变则是受影响的主要因素。最后,所有患者的年龄似乎都相当于 1-6 岁,需要进行疾病调整治疗,例如 ADNP 衍生的候选药物 NAP(达武内肽),该药物最近在患有神经退行性疾病、进行性核上性麻痹(PSP)(一种晚发 tauopathy)的女性患者中显示出疗效。
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引用次数: 0
Transcriptional Inhibition of the Mecp2 Promoter by MeCP2E1 and MeCP2E2 Isoforms Suggests Negative Auto-Regulatory Feedback that can be Moderated by Metformin MeCP2E1和MeCP2E2同工酶对Mecp2启动子的转录抑制表明,二甲双胍可调节负的自动调节反馈。
IF 2.8 4区 医学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-01-26 DOI: 10.1007/s12031-023-02177-0
Sandhini Lockman, Matthew Genung, Kimia Sheikholeslami, Annan Ali Sher, Daniel Kroft, Marjorie Buist, Carl O. Olson, Brian Toor, Mojgan Rastegar

The epigenetic factor Methyl-CpG-Binding Protein 2 (MeCP2) is a nuclear protein that binds methylated DNA molecules (both 5-methylcytosine and 5-hydroxymethylcytosine) and controls gene transcription. MeCP2 is an important transcription factor that acts in a dose-dependent manner in the brain; thus, its optimal expression level in brain cells is important. As such, its deregulated expression, as well as gain- or loss-of-function mutation, lead to impaired neurodevelopment, and compromised structure and function of brain cells, particularly in neurons. Studies from others and us have characterized two well-recognized MeCP2 isoforms: MeCP2E1 and MeCP2E2. We have reported that in Daoy medulloblastoma brain cells, MeCP2E2 overexpression leads to MeCP2E1 protein degradation. Whether MeCP2 isoforms regulate the Mecp2 promoter regulatory elements remains unexplored. We previously showed that in Daoy cells, metformin (an anti-diabetic drug) induces MECP2E1 transcripts. However, possible impact of metformin on the Mecp2 promoter activity was not studied. Here, we generated stably transduced Daoy cell reporters to express EGFP driven by the Mecp2 promoter. Transduced cells were sorted into four EGFP-expressing groups (R4-to-R7) with different intensities of EGFP expression. Our results confirm that the Mecp2 promoter is active in Daoy cells, and that overexpression of either isoform inhibits the Mecp2 promoter activity, as detected by flow cytometry and luciferase reporter assays. Interestingly, metformin partially relieved the inhibitory effect of MeCP2E1 on the Mecp2 promoter, detected by flow cytometry. Taken together, our data provide important insight towards the regulation of MeCP2 isoforms at the promoter level, which might have biological relevance to the neurobiology of the brain.

表观遗传因子甲基-CpG 结合蛋白 2(MeCP2)是一种核蛋白,能与甲基化的 DNA 分子(5-甲基胞嘧啶和 5-羟甲基胞嘧啶)结合并控制基因转录。MeCP2 是一种重要的转录因子,在大脑中以剂量依赖的方式发挥作用;因此,它在脑细胞中的最佳表达水平非常重要。因此,它的表达失调以及功能增益或缺失突变会导致神经发育受损,损害脑细胞(尤其是神经元)的结构和功能。我们和其他人的研究已经确定了两种公认的 MeCP2 异构体的特征:MeCP2E1 和 MeCP2E2。我们曾报道,在 Daoy 髓母细胞瘤脑细胞中,MeCP2E2 过表达会导致 MeCP2E1 蛋白降解。MeCP2同工酶是否会调控Mecp2启动子调控元件仍有待探索。我们以前曾发现,在 Daoy 细胞中,二甲双胍(一种抗糖尿病药物)可诱导 MECP2E1 转录本。然而,二甲双胍对 Mecp2 启动子活性可能产生的影响尚未得到研究。在此,我们生成了稳定转导的 Daoy 细胞报告基因,以表达由 Mecp2 启动子驱动的 EGFP。转导的细胞被分选为四个EGFP表达组(R4至R7),各组的EGFP表达强度不同。我们的结果证实,Mecp2启动子在Daoy细胞中是活跃的,流式细胞术和荧光素酶报告实验检测到,任何一种同工酶的过度表达都会抑制Mecp2启动子的活性。有趣的是,通过流式细胞仪检测,二甲双胍能部分缓解 MeCP2E1 对 Mecp2 启动子的抑制作用。总之,我们的数据为在启动子水平调控 MeCP2 异构体提供了重要的启示,这可能与大脑神经生物学有关。
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引用次数: 0
Multi-faceted Anti-obesity Effects of N-Methyl-D-Aspartate (NMDA) Receptor Modulators: Central-Peripheral Crosstalk N-甲基-D-天冬氨酸(NMDA)受体调节剂的多方面抗肥胖作用:中枢-外周串联。
IF 2.8 4区 医学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-01-19 DOI: 10.1007/s12031-023-02178-z
Shruti Subhash Shiromwar, Vijay R. Chidrawar, Sudarshan Singh, Havagiray R. Chitme, Rahul Maheshwari, Shabnam Sultana

Hypothalamus is central to food intake and satiety. Recent data unveiled the expression of N-methyl-D-aspartate receptors (NMDAR) on hypothalamic neurons and their interaction with GABAA and serotoninergic neuronal circuits. However, the precise mechanisms governing energy homeostasis remain elusive. Notably, in females, the consumption of progesterone-containing preparations, such as hormonal replacement therapy and birth control pills, has been associated with hyperphagia and obesity—effects mediated through the hypothalamus. To elucidate this phenomenon, we employed the progesterone-induced obesity model in female Swiss albino mice. Four NMDAR modulators were selected viz. dextromethorphan (Dxt), minocycline, d-aspartate, and cycloserine. Obesity was induced in female mice by progesterone administration for 4 weeks. Mice were allocated into 7 groups, group-1 as vehicle control (arachis oil), group-2 (progesterone + arachis oil), and group-3 as positive-control (progesterone + sibutramine); other groups were treated with test drugs + progesterone. Various parameters were recorded like food intake, thermogenesis, serum lipids, insulin, AST and ALT levels, organ-to-body weight ratio, total body fat, adiposity index, brain serotonin levels, histology of liver, kidney, and sizing of fat cells. Dxt-treated group has shown a significant downturn in body weight (p < 0.05) by a decline in food intake (p < 0.01), organ-to-liver ratio (p < 0.001), adiposity index (p < 0.01), and a rise in body temperature and brain serotonin level (p < 0.001). Dxt demonstrated anti-obesity effects by multiple mechanisms including interaction with hypothalamic GABAA channels and anti-inflammatory and free radical scavenging effects, improving the brain serotonin levels, and increasing insulin release from the pancreatic β-cells.

下丘脑是食物摄入和饱腹感的核心。最近的数据揭示了N-甲基-D-天冬氨酸受体(NMDAR)在下丘脑神经元上的表达及其与GABAA和5-羟色胺能神经元回路的相互作用。然而,影响能量平衡的确切机制仍然难以捉摸。值得注意的是,女性服用含黄体酮的制剂(如激素替代疗法和避孕药)与摄食过多和通过下丘脑介导的肥胖效应有关。为了阐明这一现象,我们采用了黄体酮诱导的肥胖模型来研究雌性瑞士白化小鼠。我们选择了四种 NMDAR 调节剂,即右美沙芬(Dxt)、米诺环素、d-天冬氨酸和环丝氨酸。雌性小鼠通过服用黄体酮诱发肥胖,为期 4 周。小鼠被分为7组,第1组为载体对照组(花生油),第2组(黄体酮+花生油),第3组为阳性对照组(黄体酮+西布曲明);其他组为试验药物+黄体酮治疗组。记录了各种参数,如食物摄入量、产热、血清脂质、胰岛素、谷草转氨酶和谷丙转氨酶水平、器官与体重比、总体脂、脂肪指数、脑血清素水平、肝脏和肾脏组织学以及脂肪细胞大小。Dxt 处理组的体重明显下降(p A 通道),并具有抗炎和清除自由基的作用,改善了脑血清素水平,增加了胰腺 β 细胞的胰岛素释放。
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引用次数: 0
Identification of Immune Infiltration and Iron Metabolism–Related Subgroups in Autism Spectrum Disorder 识别自闭症谱系障碍中与免疫渗透和铁代谢相关的亚群。
IF 2.8 4区 医学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-01-18 DOI: 10.1007/s12031-023-02179-y
Wenyan Huang, Zhenni Liu, Ziling Li, Si Meng, Yuhang Huang, Min Gao, Ning Zhong, Sujuan Zeng, Lijing Wang, Wanghong Zhao

Autism spectrum disorder (ASD) is a prevalent neurodevelopmental disorder with a broad spectrum of symptoms and prognoses. Effective therapy requires understanding this variability. ASD children’s cognitive and immunological development may depend on iron homoeostasis. This study employs a machine learning model that focuses on iron metabolism hub genes to identify ASD subgroups and describe immune infiltration patterns. A total of 97 control and 148 ASD samples were obtained from the GEO database. Differentially expressed genes (DEGs) and an iron metabolism gene collection achieved the intersection of 25 genes. Unsupervised cluster analysis determined molecular subgroups in individuals with ASD based on 25 genes related to iron metabolism. We assessed gene ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment, gene set variation analysis (GSVA), and immune infiltration analysis to compare iron metabolism subtype effects. We employed machine learning to identify subtype-predicting hub genes and utilized both training and validation sets to assess gene subtype prediction accuracy. ASD can be classified into two iron-metabolizing molecular clusters. Metabolic enrichment pathways differed between clusters. Immune infiltration showed that clusters differed immunologically. Cluster 2 had better immunological scores and more immune cells, indicating a stronger immune response. Machine learning screening identified SELENBP1 and CAND1 as important genes in ASD’s iron metabolism signaling pathway. These genes express in the brain and have AUC values over 0.8, implying significant predictive power. The present study introduces iron metabolism signaling pathway indicators to predict ASD subtypes. ASD is linked to immune cell infiltration and iron metabolism disorders.

自闭症谱系障碍(ASD)是一种普遍存在的神经发育障碍,其症状和预后范围广泛。有效的治疗需要了解这种差异性。自闭症谱系障碍儿童的认知和免疫发育可能取决于铁平衡。本研究采用机器学习模型,重点研究铁代谢枢纽基因,以识别 ASD 亚群并描述免疫浸润模式。本研究从 GEO 数据库中获得了 97 个对照组样本和 148 个 ASD 样本。差异表达基因(DEG)和铁代谢基因集合实现了25个基因的交叉。无监督聚类分析根据与铁代谢相关的 25 个基因确定了 ASD 患者的分子亚群。我们评估了基因本体(GO)、京都基因和基因组百科全书(KEGG)通路富集、基因组变异分析(GSVA)和免疫浸润分析,以比较铁代谢亚型的影响。我们采用机器学习来识别亚型预测枢纽基因,并利用训练集和验证集来评估基因亚型预测的准确性。ASD可分为两个铁代谢分子集群。不同群组之间的代谢富集途径不同。免疫浸润显示,群组之间存在免疫学差异。群组2的免疫学得分更高,免疫细胞更多,表明免疫反应更强。机器学习筛选发现 SELENBP1 和 CAND1 是 ASD 铁代谢信号通路中的重要基因。这些基因在大脑中表达,其AUC值超过0.8,意味着具有显著的预测能力。本研究引入了铁代谢信号通路指标来预测 ASD 亚型。ASD与免疫细胞浸润和铁代谢紊乱有关。
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引用次数: 0
Uncovering the Therapeutic Potential of Phosphocreatine in Diabetic Retinopathy: Mitigating Mitochondrial Dysfunction and Apoptosis via JAK2/STAT3 Signaling Pathway 揭示磷酸肌酸在糖尿病视网膜病变中的治疗潜力:通过 JAK2/STAT3 信号通路缓解线粒体功能障碍和细胞凋亡
IF 2.8 4区 医学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-01-17 DOI: 10.1007/s12031-023-02175-2
Eskandar Qaed, Eman Alyafeai, Ahmed Al-Maamari, Mohamed Y. Zaky, Marwan Almoiliqy, Bandar Al-Hamyari, Abdullah Qaid, Saeed Yafei, Waleed Aldahmash, Mueataz A. Mahyoub, Fuhan Wang, Le Kang, Zeyao Tang, Jianbin Zhang

Diabetic retinopathy (DR) stands as a prevalent complication of diabetes mellitus, causing damage to the delicate retinal capillaries and potentially leading to visual impairment. While the exact underlying cause of DR remains elusive, compelling research suggests that mitochondrial energy deficiency and the excessive generation of reactive oxygen species (ROS) play pivotal roles in its pathogenesis. Recognizing that controlling hyperglycemia alone fails to reverse the defects in retinal mitochondria induced by diabetes, current strategies seek to restore mitochondrial function as a means of safeguarding against DR. To address this pressing issue, a comprehensive study was undertaken to explore the potential of phosphocreatine (PCr) in bolstering mitochondrial bioenergetics and providing protection against DR via modulation of the JAK2/STAT3 signaling pathway. Employing rat mitochondria and RGC-5 cells, the investigation meticulously assessed the impact of PCr on ROS production, mitochondrial membrane potential, as well as the expression of crucial apoptotic and JAK2/STAT3 signaling pathway proteins, utilizing cutting-edge techniques such as high-resolution respirometry and western blotting. The remarkable outcomes revealed that PCr exerts a profound protective influence against DR by enhancing mitochondrial function and alleviating diabetes-associated symptoms and biochemical markers. Notably, PCr administration resulted in an upregulation of antiapoptotic proteins, concomitant with a downregulation of proapoptotic proteins and the JAK2/STAT3 signaling pathway. These significant findings firmly establish PCr as a potential therapeutic avenue for combating diabetic retinopathy. By augmenting mitochondrial function and exerting antiapoptotic effects via the JAK2/STAT3 signaling pathway, PCr demonstrates promising efficacy both in vivo and in vitro, particularly in counteracting the oxidative stress engendered by hyperglycemia. In summary, our study sheds light on the potential of PCr as an innovative therapeutic strategy for diabetic retinopathy. By bolstering mitochondrial function and exerting protective effects via the modulation of the JAK2/STAT3 signaling pathway, PCr holds immense promise in ameliorating the impact of DR in the face of oxidative stress induced by hyperglycemia.

糖尿病视网膜病变(DR)是糖尿病的一种常见并发症,会对脆弱的视网膜毛细血管造成损害,并可能导致视力损伤。虽然糖尿病视网膜病变的确切病因仍然难以捉摸,但令人信服的研究表明,线粒体能量缺乏和活性氧(ROS)的过度生成在其发病机制中起着关键作用。由于认识到仅控制高血糖无法逆转糖尿病诱导的视网膜线粒体缺陷,目前的策略寻求恢复线粒体功能作为预防 DR 的一种手段。为了解决这个紧迫的问题,我们开展了一项综合研究,探索磷酸肌酸(PCr)通过调节 JAK2/STAT3 信号通路增强线粒体生物能并提供抗 DR 保护的潜力。这项研究利用大鼠线粒体和 RGC-5 细胞,采用高分辨率呼吸测定法和 Western 印迹法等尖端技术,细致评估了 PCr 对 ROS 生成、线粒体膜电位以及关键凋亡蛋白和 JAK2/STAT3 信号通路蛋白表达的影响。研究结果表明,PCr 能增强线粒体功能,减轻糖尿病相关症状和生化指标,从而对 DR 产生深远的保护作用。值得注意的是,服用 PCr 可上调抗凋亡蛋白,同时下调促凋亡蛋白和 JAK2/STAT3 信号通路。这些重要发现坚定地确立了 PCr 作为防治糖尿病视网膜病变的潜在治疗途径的地位。通过增强线粒体功能并通过 JAK2/STAT3 信号通路发挥抗凋亡作用,PCr 在体内和体外都表现出了良好的疗效,尤其是在对抗高血糖引起的氧化应激方面。总之,我们的研究揭示了 PCr 作为糖尿病视网膜病变创新治疗策略的潜力。PCr 可增强线粒体功能,并通过调节 JAK2/STAT3 信号通路发挥保护作用,因此在面对高血糖诱导的氧化应激时,PCr 在改善 DR 的影响方面大有可为。
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Journal of Molecular Neuroscience
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