Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference最新文献
Pub Date : 2025-07-01DOI: 10.1109/EMBC58623.2025.11254065
Nitesh Bharot, Priyanka Verma, Karandeep Singh, Nisha Chaurasia, John G Breslin
Skin lesion classification using deep learning techniques is challenged by insufficient samples and class imbalances in datasets. This study introduces a novel framework, the class expert Deep Convolutional Generative Adversarial Network (DCGAN), designed to handle class imbalance and enhance classification accuracy for under represented classes. The proposed framework also leverages weight transfer from the GAN discriminator trained on each class to expert layers, which are then modified to classify skin lesion images more accurately using the discriminator's weights. This transfer learning strategy enhances the performance of the Convolutional Neural Network (CNN) model in DCGAN by utilizing the discriminative features learned during GAN training. Experimental evaluations demonstrate that the proposed class expert DCGAN framework achieves notable improvements in accuracy and precision, particularly for classes with fewer samples. Specifically, it achieves a 2-3% increase in classification accuracy compared to traditional methods. These results underscore the effectiveness of leveraging GANs for data augmentation and discriminative feature extraction in medical image classification. Thus, the class expert DCGAN framework offers a promising solution to improve the performance of skin lesion classification models, facilitating highly reliable diagnostic decisions and enhancing the interpretation of dermatological images across diverse clinical scenarios.
{"title":"Boosting Skin Lesion Classification with a Class Expert DCGAN Framework for Skin Disease Detection.","authors":"Nitesh Bharot, Priyanka Verma, Karandeep Singh, Nisha Chaurasia, John G Breslin","doi":"10.1109/EMBC58623.2025.11254065","DOIUrl":"https://doi.org/10.1109/EMBC58623.2025.11254065","url":null,"abstract":"<p><p>Skin lesion classification using deep learning techniques is challenged by insufficient samples and class imbalances in datasets. This study introduces a novel framework, the class expert Deep Convolutional Generative Adversarial Network (DCGAN), designed to handle class imbalance and enhance classification accuracy for under represented classes. The proposed framework also leverages weight transfer from the GAN discriminator trained on each class to expert layers, which are then modified to classify skin lesion images more accurately using the discriminator's weights. This transfer learning strategy enhances the performance of the Convolutional Neural Network (CNN) model in DCGAN by utilizing the discriminative features learned during GAN training. Experimental evaluations demonstrate that the proposed class expert DCGAN framework achieves notable improvements in accuracy and precision, particularly for classes with fewer samples. Specifically, it achieves a 2-3% increase in classification accuracy compared to traditional methods. These results underscore the effectiveness of leveraging GANs for data augmentation and discriminative feature extraction in medical image classification. Thus, the class expert DCGAN framework offers a promising solution to improve the performance of skin lesion classification models, facilitating highly reliable diagnostic decisions and enhancing the interpretation of dermatological images across diverse clinical scenarios.</p>","PeriodicalId":72237,"journal":{"name":"Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference","volume":"2025 ","pages":"1-7"},"PeriodicalIF":0.0,"publicationDate":"2025-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145671352","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-07-01DOI: 10.1109/EMBC58623.2025.11254676
Lorenzo L Gianquintieri, Enrico Gianluca E G Caiani
Global warming is one of the most relevant effects of climate change, and poses a serious hazard for human health, in particular in relation to the cardiovascular system, leading to an increased short-term risk of Out-of-Hospital Cardiac Arrest (OHCA). This study examines this risk increase from a geospatial viewpoint, going beyond pathophysiology, and emphasizing the need for a public health-focused, multidisciplinary approach known as environmental epidemiology. While some solutions have already been proposed (in particular, risk indexing as defined by the Intergovernmental Panel on Climate Change, IPCC, and the Distributed Lag Non-linear Model, DLNM), they require complex and manifold data (thus limiting replicability), are computationally intensive, and cannot be easily interpreted. To address these gaps, this research introduces a Geospatial Heat-related Risk Index (GHRI) for territorial risk stratification, aiding in efficient Emergency Medical Services (EMS) resource planning. Focusing on Lombardy, Italy, a densely populated region with diverse climates, the study analyzes temperature data from the Regional Agency for Environmental Protection and OHCA records from the Regional Agency for Emergency/Urgency (AREU) between 2017 and 2021. Data were mapped onto 96 Base Statistical Areas (BSAs), each with approximately 100'000 residents. Using Geographic Information Systems (GIS) and Python, the study finds that heat exposure generally increases OHCA risk, though some areas showed protective or insignificant effects.. The findings highlight the importance of GIS-based environmental epidemiology in climate adaptation policies and emergency healthcare planning, providing actionable insights for public health strategies.Clinical Relevance- The proposed framework allows to identify territories that exhibit higher risk in terms of increased out-of-hospital cardiac arrest incidence during heat days, thus providing valuable information to support planning and management of Emergency Medical Services (EMS). More efficient resources allocation reduces intervention time and increases patients' survival probability, which is particularly critical for out-of-hospital cardiac arrest.
{"title":"A New Geospatial Index for Territorial Risk Stratification of Out-of-Hospital Cardiac Arrest During Heat Days.","authors":"Lorenzo L Gianquintieri, Enrico Gianluca E G Caiani","doi":"10.1109/EMBC58623.2025.11254676","DOIUrl":"https://doi.org/10.1109/EMBC58623.2025.11254676","url":null,"abstract":"<p><p>Global warming is one of the most relevant effects of climate change, and poses a serious hazard for human health, in particular in relation to the cardiovascular system, leading to an increased short-term risk of Out-of-Hospital Cardiac Arrest (OHCA). This study examines this risk increase from a geospatial viewpoint, going beyond pathophysiology, and emphasizing the need for a public health-focused, multidisciplinary approach known as environmental epidemiology. While some solutions have already been proposed (in particular, risk indexing as defined by the Intergovernmental Panel on Climate Change, IPCC, and the Distributed Lag Non-linear Model, DLNM), they require complex and manifold data (thus limiting replicability), are computationally intensive, and cannot be easily interpreted. To address these gaps, this research introduces a Geospatial Heat-related Risk Index (GHRI) for territorial risk stratification, aiding in efficient Emergency Medical Services (EMS) resource planning. Focusing on Lombardy, Italy, a densely populated region with diverse climates, the study analyzes temperature data from the Regional Agency for Environmental Protection and OHCA records from the Regional Agency for Emergency/Urgency (AREU) between 2017 and 2021. Data were mapped onto 96 Base Statistical Areas (BSAs), each with approximately 100'000 residents. Using Geographic Information Systems (GIS) and Python, the study finds that heat exposure generally increases OHCA risk, though some areas showed protective or insignificant effects.. The findings highlight the importance of GIS-based environmental epidemiology in climate adaptation policies and emergency healthcare planning, providing actionable insights for public health strategies.Clinical Relevance- The proposed framework allows to identify territories that exhibit higher risk in terms of increased out-of-hospital cardiac arrest incidence during heat days, thus providing valuable information to support planning and management of Emergency Medical Services (EMS). More efficient resources allocation reduces intervention time and increases patients' survival probability, which is particularly critical for out-of-hospital cardiac arrest.</p>","PeriodicalId":72237,"journal":{"name":"Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference","volume":"2025 ","pages":"1-6"},"PeriodicalIF":0.0,"publicationDate":"2025-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145671353","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-07-01DOI: 10.1109/EMBC58623.2025.11254777
Alberto Porta, Paolo Castiglioni, Beatrice Cairo, Vlasta Bari, Beatrice De Maria, Luc Quintin
We test the hypothesis that amplitude permutation conditional entropy (APCE) is more powerful than permutation conditional entropy (PCE) when complexity of heart period (HP) dynamics is decreased by vagal blockade or withdrawal. We acquired HP variability in 9 healthy male physicians (age: 25-46 yrs) at baseline (B) and during administration of a high dose of atropine (AT) and in 15 healthy nonsmoking volunteers (age: 24-54 yrs, 9 males and 6 females) at rest in horizontal position (T0) and during 90° head-up tilt (T90). In addition to coarse-graining-free methods, like PCE and APCE, we computed coarse-graining-based k-nearest-neighbor conditional entropy (KNNCE) for comparison. Markers were computed over 256 consecutive HP values, thus targeting the complexity of short-term cardiac control. PCE was unable to detect the decrease of HP variability complexity during AT compared to B, while APCE and KNNCE could. All the conditional entropy markers found a decrease in HP variability complexity during T90 compared to T0. Only APCE was correlated with KNNCE in both protocols. We conclude that APCE is more reliable than PCE in assessing cardiac control complexity, likely due to the better ability of APCE in the presence of the low signal-to-noise ratio of HP dynamics observed during AT.
{"title":"Amplitude Permutation Conditional Entropy Detects the Decrease of Complexity of Heart Period Variability During Vagal Inhibition.","authors":"Alberto Porta, Paolo Castiglioni, Beatrice Cairo, Vlasta Bari, Beatrice De Maria, Luc Quintin","doi":"10.1109/EMBC58623.2025.11254777","DOIUrl":"https://doi.org/10.1109/EMBC58623.2025.11254777","url":null,"abstract":"<p><p>We test the hypothesis that amplitude permutation conditional entropy (APCE) is more powerful than permutation conditional entropy (PCE) when complexity of heart period (HP) dynamics is decreased by vagal blockade or withdrawal. We acquired HP variability in 9 healthy male physicians (age: 25-46 yrs) at baseline (B) and during administration of a high dose of atropine (AT) and in 15 healthy nonsmoking volunteers (age: 24-54 yrs, 9 males and 6 females) at rest in horizontal position (T0) and during 90° head-up tilt (T90). In addition to coarse-graining-free methods, like PCE and APCE, we computed coarse-graining-based k-nearest-neighbor conditional entropy (KNNCE) for comparison. Markers were computed over 256 consecutive HP values, thus targeting the complexity of short-term cardiac control. PCE was unable to detect the decrease of HP variability complexity during AT compared to B, while APCE and KNNCE could. All the conditional entropy markers found a decrease in HP variability complexity during T90 compared to T0. Only APCE was correlated with KNNCE in both protocols. We conclude that APCE is more reliable than PCE in assessing cardiac control complexity, likely due to the better ability of APCE in the presence of the low signal-to-noise ratio of HP dynamics observed during AT.</p>","PeriodicalId":72237,"journal":{"name":"Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference","volume":"2025 ","pages":"1-4"},"PeriodicalIF":0.0,"publicationDate":"2025-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145671364","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-07-01DOI: 10.1109/EMBC58623.2025.11253627
Hsu Thiri Soe, Hiroyasu Iwata
The rising global prevalence of heart disease necessitates early detection for improved diagnosis and treatments. Automated echocardiography robotic systems are revolutionizing cardiology by enhancing diagnostic accuracy and efficiency. These systems integrate real-time image acquisition and processing to navigate patient anatomy and adapt imaging techniques dynamically without human intervention. Accurate cardiac view classification is vital for capturing diagnostically relevant images, forming the basis for subsequent automated disease detection and diagnosis. Although deep learning has emerged as a powerful tool for medical image analysis, its application in echocardiography remains limited due to the complexity of multi-view echocardiography imaging. The proposed system leverages deep learning models, specifically convolutional neural networks, trained on a diverse dataset of echocardiographic images to distinguish standard cardiac views, including the parasternal long-axis, parasternal short-axis, and apical four-chamber views. This capability enables the robotic system to autonomously navigate patient anatomy and optimize image acquisition in real time, minimizing operator dependency and ensuring imaging consistency. The long-term objective of this study is to develop a fully autonomous robotic system capable of early and accurate cardiovascular disease diagnosis, ultimately reducing diagnostic delays and improving patient outcomes.
{"title":"An Intelligent Cardiac View Classification System for Autonomous Echocardiography Robot.","authors":"Hsu Thiri Soe, Hiroyasu Iwata","doi":"10.1109/EMBC58623.2025.11253627","DOIUrl":"https://doi.org/10.1109/EMBC58623.2025.11253627","url":null,"abstract":"<p><p>The rising global prevalence of heart disease necessitates early detection for improved diagnosis and treatments. Automated echocardiography robotic systems are revolutionizing cardiology by enhancing diagnostic accuracy and efficiency. These systems integrate real-time image acquisition and processing to navigate patient anatomy and adapt imaging techniques dynamically without human intervention. Accurate cardiac view classification is vital for capturing diagnostically relevant images, forming the basis for subsequent automated disease detection and diagnosis. Although deep learning has emerged as a powerful tool for medical image analysis, its application in echocardiography remains limited due to the complexity of multi-view echocardiography imaging. The proposed system leverages deep learning models, specifically convolutional neural networks, trained on a diverse dataset of echocardiographic images to distinguish standard cardiac views, including the parasternal long-axis, parasternal short-axis, and apical four-chamber views. This capability enables the robotic system to autonomously navigate patient anatomy and optimize image acquisition in real time, minimizing operator dependency and ensuring imaging consistency. The long-term objective of this study is to develop a fully autonomous robotic system capable of early and accurate cardiovascular disease diagnosis, ultimately reducing diagnostic delays and improving patient outcomes.</p>","PeriodicalId":72237,"journal":{"name":"Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference","volume":"2025 ","pages":"1-5"},"PeriodicalIF":0.0,"publicationDate":"2025-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145671309","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
This study aims to investigate whether quantitative radiomic features extracted from Positron Emission Tomography/Computed Tomography (PET/CT) could differentiate triple-negative breast cancer (TNBC) from non-triple-negative breast cancer (non-TNBC). We propose a pipeline that combines deep learning for cancer lesion segmentation with machine learning techniques to classify TNBC. Our approach leveraged the radiomic features extracted from 18F-fluorodeoxyglucose PET/CT. This retrospective study included the PET/CT images of 217 patients with breast cancer (57 TNBC and 160 non-TNBC) admitted to Georges-François Leclerc Hospital. The tumor regions of interest were automatically segmented on PET images using a deep learning model and mapped to CT scans. Radiomic features were extracted from 3D tumor volumes and machine learning classifiers were built using stratified 5-fold cross-validation. Recursive feature elimination was employed to rank and select the most relevant radiomic features, thereby enhancing classification performance. The model was evaluated using the F1-score, area under the receiver operating characteristic (ROC) curve (AUC), accuracy, sensitivity, and specificity. The proposed method achieved promising performance, with an F1-score of 0.90 ± 0.02, an accuracy of 0.86 ± 0.07, a sensitivity of 0.91 ± 0.06, and an AUC of 0.88 ± 0.04, using the top-ranked features. The metrics were evaluated as the average over a five-fold cross-validation. Radiomic features extracted from PET and CT scans provide valuable prognostic insights for the identification of TNBC. This study demonstrated that machine learning algorithms based on radiomic features and automated PET/CT segmentation can accurately distinguish TNBC from non-TNBC.Clinical relevance- This study demonstrates the potential of image-based radiomic analysis combined with machine learning to differentiate triple-negative breast cancer (TNBC) from non-TNBC. By using deep learning for automatic tumor segmentation and feature extraction, this approach offers a non-invasive, quantitative tool that can improve TNBC diagnosis and the efficiency of treatment strategies. These advancements may help clinicians provide more reliable insights, while reducing the likelihood of misclassification.
{"title":"Automated Radiomics Analysis from Multi-Modal Image Segmentation for Predicting Triple Negative Breast Cancer.","authors":"Tewele W Tareke, Neree Payan, Alexandre Cochet, Yaqeen Ali, Laurent Arnould, Benoit Presles, Jean-Marc Vrigneaud, Fabrice Meriaudeau, Alain Lalande","doi":"10.1109/EMBC58623.2025.11252611","DOIUrl":"https://doi.org/10.1109/EMBC58623.2025.11252611","url":null,"abstract":"<p><p>This study aims to investigate whether quantitative radiomic features extracted from Positron Emission Tomography/Computed Tomography (PET/CT) could differentiate triple-negative breast cancer (TNBC) from non-triple-negative breast cancer (non-TNBC). We propose a pipeline that combines deep learning for cancer lesion segmentation with machine learning techniques to classify TNBC. Our approach leveraged the radiomic features extracted from <sup>18</sup>F-fluorodeoxyglucose PET/CT. This retrospective study included the PET/CT images of 217 patients with breast cancer (57 TNBC and 160 non-TNBC) admitted to Georges-François Leclerc Hospital. The tumor regions of interest were automatically segmented on PET images using a deep learning model and mapped to CT scans. Radiomic features were extracted from 3D tumor volumes and machine learning classifiers were built using stratified 5-fold cross-validation. Recursive feature elimination was employed to rank and select the most relevant radiomic features, thereby enhancing classification performance. The model was evaluated using the F1-score, area under the receiver operating characteristic (ROC) curve (AUC), accuracy, sensitivity, and specificity. The proposed method achieved promising performance, with an F1-score of 0.90 ± 0.02, an accuracy of 0.86 ± 0.07, a sensitivity of 0.91 ± 0.06, and an AUC of 0.88 ± 0.04, using the top-ranked features. The metrics were evaluated as the average over a five-fold cross-validation. Radiomic features extracted from PET and CT scans provide valuable prognostic insights for the identification of TNBC. This study demonstrated that machine learning algorithms based on radiomic features and automated PET/CT segmentation can accurately distinguish TNBC from non-TNBC.Clinical relevance- This study demonstrates the potential of image-based radiomic analysis combined with machine learning to differentiate triple-negative breast cancer (TNBC) from non-TNBC. By using deep learning for automatic tumor segmentation and feature extraction, this approach offers a non-invasive, quantitative tool that can improve TNBC diagnosis and the efficiency of treatment strategies. These advancements may help clinicians provide more reliable insights, while reducing the likelihood of misclassification.</p>","PeriodicalId":72237,"journal":{"name":"Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference","volume":"2025 ","pages":"1-6"},"PeriodicalIF":0.0,"publicationDate":"2025-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145671311","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
For adolescent idiopathic scoliosis (AIS), a common condition in children, physiotherapy scoliosis-specific exercise (PSSE) is an effective conservative treatment. However, the long-term process of PSSE treatment often leads to low compliance during unsupervised exercises. In this study, we proposed a wearable system for the evaluation of PSSE compliance for AIS patients. The proposed system contains wearable devices and analysis software. The wearable device collected surface electromyography (sEMG) data from back muscles. We extracted features from sEMG data, and adopted support vector machine classifiers to evaluate PSSE compliance for AIS patients in the software. To validate the proposed system, we collected data from 11 AIS patients during a typical exercise in PSSE. Among the extracted features, the most promising for differentiating PSSE compliance were those related to electromyography (EMG) amplitude and muscle fatigue. Specifically, the integrated EMG and frequency ratio showed strong potential. To evaluate the proposed system, we adopted leave-one-subject-out cross-validation, resulting in perfect accuracy. The results showed that the proposed system was potentially feasible for evaluating PSSE compliance in AIS patients to achieve optimal efficacy, and was convenient for supporting clinicians and parents in monitoring correction of AIS patients' PSSE execution.Clinical Relevance- This system provides a method for evaluating PSSE compliance in AIS patients, helping achieve optimal PSSE efficacy.
{"title":"A Wearable System for Evaluation of PSSE Compliance for AIS Patient.","authors":"Yongcong Huang, Junjie Li, Huaiyu Zhu, Bohan Yu, Bihong Yu, Honggen Du, Shao Chen, Xiaomin Chen, Chen Liu, Kaiqi Wang, Junxiang Dong, Jiahao Mou, Yun Pan","doi":"10.1109/EMBC58623.2025.11254910","DOIUrl":"https://doi.org/10.1109/EMBC58623.2025.11254910","url":null,"abstract":"<p><p>For adolescent idiopathic scoliosis (AIS), a common condition in children, physiotherapy scoliosis-specific exercise (PSSE) is an effective conservative treatment. However, the long-term process of PSSE treatment often leads to low compliance during unsupervised exercises. In this study, we proposed a wearable system for the evaluation of PSSE compliance for AIS patients. The proposed system contains wearable devices and analysis software. The wearable device collected surface electromyography (sEMG) data from back muscles. We extracted features from sEMG data, and adopted support vector machine classifiers to evaluate PSSE compliance for AIS patients in the software. To validate the proposed system, we collected data from 11 AIS patients during a typical exercise in PSSE. Among the extracted features, the most promising for differentiating PSSE compliance were those related to electromyography (EMG) amplitude and muscle fatigue. Specifically, the integrated EMG and frequency ratio showed strong potential. To evaluate the proposed system, we adopted leave-one-subject-out cross-validation, resulting in perfect accuracy. The results showed that the proposed system was potentially feasible for evaluating PSSE compliance in AIS patients to achieve optimal efficacy, and was convenient for supporting clinicians and parents in monitoring correction of AIS patients' PSSE execution.Clinical Relevance- This system provides a method for evaluating PSSE compliance in AIS patients, helping achieve optimal PSSE efficacy.</p>","PeriodicalId":72237,"journal":{"name":"Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference","volume":"2025 ","pages":"1-4"},"PeriodicalIF":0.0,"publicationDate":"2025-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145671340","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-07-01DOI: 10.1109/EMBC58623.2025.11254813
Antonio F Cardoso, Pedro Sousa, Helder P Oliveira, Tania Pereira
Chest CT scans are essential in diagnosing lung abnormalities, including lung cancer, but their utility in training deep learning models is often pushed back by limited data availability, high labeling costs, and privacy concerns. To address these challenges, this study explores the use of score-based diffusion models for the conditional generation of lung CT scans slices. Two generation scenarios are explored: one limited to lung segmentation masks and another incorporating both lung and nodule segmentation mappings to guide the synthesis process. The proposed methods are custom U-Net architecture models trained to predict the scores in Variance Preserving (VP) and Variance Exploding (VE) Stochastic Differential Equations (SDEs), composing the primary ground for comparison in conditional sample generation. The results demonstrate the VP SDEs model's superiority in generating high-fidelity images, as evidenced by high SSIM (0.894) and PSNR (28.6) values, as well as low domain-specific FID (173.4), MMD (0.0133) and ECS (0.78) scores. The generated images consistently followed the conditional mapping guidance during the generation process, effectively producing realistic lung and nodule structures, highlighting their potential for data augmentation in medical imaging tasks. While the models achieved notable success in generating accurate 2D lung CT scan slices given simple conditional image region mappings, future work surrounds the extension of these methods to 3D conditional generation and the use of richer conditional mappings to account for broader anatomical variations. Nevertheless, this study holds promise for improvement in computer-aided systems through the support in deep learning model training for lung disease diagnosis and classification.
胸部CT扫描对于诊断肺部异常(包括肺癌)至关重要,但由于数据可用性有限、标签成本高和隐私问题,它们在训练深度学习模型中的应用往往受到阻碍。为了解决这些挑战,本研究探索了基于分数的扩散模型用于肺CT扫描切片的条件生成。探索了两种生成场景:一种限于肺分割面具,另一种结合肺和结节分割映射来指导合成过程。所提出的方法是定制的U-Net架构模型,用于预测方差保持(VP)和方差爆炸(VE)随机微分方程(SDEs)中的分数,构成条件样本生成中比较的主要基础。结果表明,VP SDEs模型在生成高保真图像方面具有优势,SSIM(0.894)和PSNR(28.6)值较高,domain specific FID(173.4)、MMD(0.0133)和ECS(0.78)分数较低。生成的图像在生成过程中始终遵循条件映射指导,有效地生成真实的肺和结节结构,突出了其在医学成像任务中的数据增强潜力。虽然这些模型在生成精确的二维肺部CT扫描切片方面取得了显著的成功,但未来的工作将围绕着将这些方法扩展到3D条件生成,并使用更丰富的条件映射来解释更广泛的解剖变化。尽管如此,该研究通过支持肺部疾病诊断和分类的深度学习模型训练,为计算机辅助系统的改进提供了希望。
{"title":"Conditional Score-based Diffusion Models for Lung CT Scans Generation.","authors":"Antonio F Cardoso, Pedro Sousa, Helder P Oliveira, Tania Pereira","doi":"10.1109/EMBC58623.2025.11254813","DOIUrl":"https://doi.org/10.1109/EMBC58623.2025.11254813","url":null,"abstract":"<p><p>Chest CT scans are essential in diagnosing lung abnormalities, including lung cancer, but their utility in training deep learning models is often pushed back by limited data availability, high labeling costs, and privacy concerns. To address these challenges, this study explores the use of score-based diffusion models for the conditional generation of lung CT scans slices. Two generation scenarios are explored: one limited to lung segmentation masks and another incorporating both lung and nodule segmentation mappings to guide the synthesis process. The proposed methods are custom U-Net architecture models trained to predict the scores in Variance Preserving (VP) and Variance Exploding (VE) Stochastic Differential Equations (SDEs), composing the primary ground for comparison in conditional sample generation. The results demonstrate the VP SDEs model's superiority in generating high-fidelity images, as evidenced by high SSIM (0.894) and PSNR (28.6) values, as well as low domain-specific FID (173.4), MMD (0.0133) and ECS (0.78) scores. The generated images consistently followed the conditional mapping guidance during the generation process, effectively producing realistic lung and nodule structures, highlighting their potential for data augmentation in medical imaging tasks. While the models achieved notable success in generating accurate 2D lung CT scan slices given simple conditional image region mappings, future work surrounds the extension of these methods to 3D conditional generation and the use of richer conditional mappings to account for broader anatomical variations. Nevertheless, this study holds promise for improvement in computer-aided systems through the support in deep learning model training for lung disease diagnosis and classification.</p>","PeriodicalId":72237,"journal":{"name":"Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference","volume":"2025 ","pages":"1-7"},"PeriodicalIF":0.0,"publicationDate":"2025-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145671405","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-07-01DOI: 10.1109/EMBC58623.2025.11252971
Davide Marzorati, Alvise Dei Rossi, Radoslava Svihrova, Max Grossenbacher, Francesca Dalia Faraci
Early detection of burnout is of utmost importance to avoid severe health consequences. Burnout is typically assessed through standardized questionnaires with self-reported information, a technique that could potentially delay its diagnosis. Wearable devices continuously and unobtrusively collect health-related data, making them valuable tools for the early detection of several mental health issues, including burnout syndrome. In this paper we report initial insights on the machine learning prediction of baseline burnout risk across cognitive, emotional, and physical dimensions. Our data consists of the first 30 days of a 9-months longitudinal study with 239 participants, including monthly burnout assessments and health data from smartwatches. Aggregated mean and standard deviation of physiological features over time windows of varying duration were employed as predictors of baseline burnout risk. Models employing sleep, cardiac, and stress features achieved a balanced accuracy of 0.66 and 0.68 in the detection of cognitive weariness and physical fatigue risk, respectively. The prediction of emotional exhaustion risk reached lower performance with a balanced accuracy of 0.55, suggesting the need of integrating additional data sources to reach better-than-chance performance. We expect to improve burnout risk prediction by crafting additional features and exploiting the collected data over their full longitudinal scale.
{"title":"Burnout Risk Prediction through Wearable Devices: An Initial Assessment.","authors":"Davide Marzorati, Alvise Dei Rossi, Radoslava Svihrova, Max Grossenbacher, Francesca Dalia Faraci","doi":"10.1109/EMBC58623.2025.11252971","DOIUrl":"https://doi.org/10.1109/EMBC58623.2025.11252971","url":null,"abstract":"<p><p>Early detection of burnout is of utmost importance to avoid severe health consequences. Burnout is typically assessed through standardized questionnaires with self-reported information, a technique that could potentially delay its diagnosis. Wearable devices continuously and unobtrusively collect health-related data, making them valuable tools for the early detection of several mental health issues, including burnout syndrome. In this paper we report initial insights on the machine learning prediction of baseline burnout risk across cognitive, emotional, and physical dimensions. Our data consists of the first 30 days of a 9-months longitudinal study with 239 participants, including monthly burnout assessments and health data from smartwatches. Aggregated mean and standard deviation of physiological features over time windows of varying duration were employed as predictors of baseline burnout risk. Models employing sleep, cardiac, and stress features achieved a balanced accuracy of 0.66 and 0.68 in the detection of cognitive weariness and physical fatigue risk, respectively. The prediction of emotional exhaustion risk reached lower performance with a balanced accuracy of 0.55, suggesting the need of integrating additional data sources to reach better-than-chance performance. We expect to improve burnout risk prediction by crafting additional features and exploiting the collected data over their full longitudinal scale.</p>","PeriodicalId":72237,"journal":{"name":"Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference","volume":"2025 ","pages":"1-5"},"PeriodicalIF":0.0,"publicationDate":"2025-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145671461","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Modeling the spatiotemporal patterns of whole-brain functional networks (FBNs) using functional magnetic resonance imaging (fMRI) is crucial for understanding brain function. Although existing methods, either shallow or deep models, have achieved promising outcomes, they lack the capability to concurrently extract multiple target FBNs while fully leveraging the inherent four-dimensional (4D) features of fMRI data. In this study, we propose a Multi-Pattern Spatiotemporal Hybrid Attention 4D CNN model (MSTHA-4DCNN) to concurrently capture the spatiotemporal patterns of multiple FBNs, building upon the rich spatial and temporal characteristics embedded in 4D fMRI data. The MSTHA-4DCNN extracts spatial patterns through the Multi-Pattern Spatial Attention 4D CNN (MSA-4DCNN), and subsequently incorporates Multi-Pattern Temporal Guided Attention Network (MT-GANet) to model temporal representations guided by the derived spatial patterns. We train the proposed model on a naturalistic fMRI dataset, and evaluate its generalizability on an independent public dataset from Cambridge Centre for Ageing and Neuroscience (Cam-CAN). The experimental results indicate that MSTHA-4DCNN exhibits promising performance and generalization ability in concurrently and effectively identifying spatiotemporal patterns of FBNs, outperforming other state-of-the-art models and offering a potent tool for advancing our understanding of complex neural processes.
{"title":"Concurrent Modeling of Naturalistic Functional Brain Networks: A Four-Dimensional Multi-Pattern Spatio-temporal Hybrid Attention Convolutional Neural Network (MSTHA-4DCNN).","authors":"Ruonan Yang, Zihan Ma, Zhenqing Ding, Song Yin, Xiao Li, Mengxiang Chu, Kexin Wang, Yuqing Hou, Xiaowei He, Yudan Ren","doi":"10.1109/EMBC58623.2025.11253072","DOIUrl":"https://doi.org/10.1109/EMBC58623.2025.11253072","url":null,"abstract":"<p><p>Modeling the spatiotemporal patterns of whole-brain functional networks (FBNs) using functional magnetic resonance imaging (fMRI) is crucial for understanding brain function. Although existing methods, either shallow or deep models, have achieved promising outcomes, they lack the capability to concurrently extract multiple target FBNs while fully leveraging the inherent four-dimensional (4D) features of fMRI data. In this study, we propose a Multi-Pattern Spatiotemporal Hybrid Attention 4D CNN model (MSTHA-4DCNN) to concurrently capture the spatiotemporal patterns of multiple FBNs, building upon the rich spatial and temporal characteristics embedded in 4D fMRI data. The MSTHA-4DCNN extracts spatial patterns through the Multi-Pattern Spatial Attention 4D CNN (MSA-4DCNN), and subsequently incorporates Multi-Pattern Temporal Guided Attention Network (MT-GANet) to model temporal representations guided by the derived spatial patterns. We train the proposed model on a naturalistic fMRI dataset, and evaluate its generalizability on an independent public dataset from Cambridge Centre for Ageing and Neuroscience (Cam-CAN). The experimental results indicate that MSTHA-4DCNN exhibits promising performance and generalization ability in concurrently and effectively identifying spatiotemporal patterns of FBNs, outperforming other state-of-the-art models and offering a potent tool for advancing our understanding of complex neural processes.</p>","PeriodicalId":72237,"journal":{"name":"Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference","volume":"2025 ","pages":"1-6"},"PeriodicalIF":0.0,"publicationDate":"2025-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145671427","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Limb movement coordination is a critical indicator in general movement analysis (GMA), which is often used to assess newborn neurological development. Asymmetry in limb movements may indicate brain injury or motor control disorders, also associated with conditions such as cerebral palsy. In this work, we present an automated video processing framework for assessing the coordination of left and right limb movements, aiming to assist healthcare professionals to evaluate infant's limb movement coordination during GMA. We use AggPose, a pose recognition tool based on a Transformer architecture, to extract 12 keypoints (including arms and legs) from video frames. The intensity of movement is calculated using the temporal standard deviation of the keypoint coordinates. Finally, the coordination of movement is analyzed by comparing the cross-correlation and Pearson correlation coefficients of the movement signals between left and right limbs. Our clinical dataset, created in the neonatal intensive care unit, includes 23 preterm infants without neurological disorders. The proposed method shows average cross-correlation and Pearson correlation coefficients of 0.788 and 0.712, respectively, indicating the potential in analyzing the motion coordination of infant limb movements.
{"title":"Camera-based Analysis of Motion Coordination Between Infant Left and Right Limbs: A Clinical Study in NICU.","authors":"Yiming Zhong, Ziyan Wu, Yongshen Zeng, Xiaoyan Song, Qiqiong Wang, Wenjin Wang","doi":"10.1109/EMBC58623.2025.11254151","DOIUrl":"https://doi.org/10.1109/EMBC58623.2025.11254151","url":null,"abstract":"<p><p>Limb movement coordination is a critical indicator in general movement analysis (GMA), which is often used to assess newborn neurological development. Asymmetry in limb movements may indicate brain injury or motor control disorders, also associated with conditions such as cerebral palsy. In this work, we present an automated video processing framework for assessing the coordination of left and right limb movements, aiming to assist healthcare professionals to evaluate infant's limb movement coordination during GMA. We use AggPose, a pose recognition tool based on a Transformer architecture, to extract 12 keypoints (including arms and legs) from video frames. The intensity of movement is calculated using the temporal standard deviation of the keypoint coordinates. Finally, the coordination of movement is analyzed by comparing the cross-correlation and Pearson correlation coefficients of the movement signals between left and right limbs. Our clinical dataset, created in the neonatal intensive care unit, includes 23 preterm infants without neurological disorders. The proposed method shows average cross-correlation and Pearson correlation coefficients of 0.788 and 0.712, respectively, indicating the potential in analyzing the motion coordination of infant limb movements.</p>","PeriodicalId":72237,"journal":{"name":"Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference","volume":"2025 ","pages":"1-4"},"PeriodicalIF":0.0,"publicationDate":"2025-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145671416","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference