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Altered Functional Network Energy Across Multiscale Brain Networks in Preterm vs. Full-Term Subjects: Insights from the Adolescent Brain Cognitive Development (ABCD) Study. 早产儿与足月受试者多尺度脑网络功能网络能量的改变:来自青少年大脑认知发展(ABCD)研究的见解。
Qiang Li, Dawn Jensen, Zening Fu, Teddy Jakim, Masoud Seraji, Selim Suleymanoglu, G Hari Surya Bharadwaj, Jiayu Chen, Vince D Calhoun, Jingyu Liu

Infants born prematurely, or preterm, can experience altered brain connectivity, due in part to incomplete brain development at the time of parturition. Research has also shown structural and functional differences in the brain that persist in these individuals as they enter adolescence when compared to peers who were fully mature at birth. In this study, we examined functional network energy across multiscale functional connectivity in approximately 4600 adolescents from the Adolescent Brain Cognitive Development (ABCD) study who were either preterm or full term at birth. We identified three key brain networks that show significant differences in network energy between preterm and full-term subjects. These networks include the visual network (comprising the occipitotemporal and occipital subnetworks), the sensorimotor network, and the high cognitive network (including the temporoparietal and frontal subnetworks). Additionally, it was demonstrated that full-term subjects exhibit greater instability, leading to more dynamic reconfiguration of functional brain information and increased flexibility across the three identified canonical brain networks compared to preterm subjects. In contrast, those born prematurely show more stable networks but less dynamic and flexible organization of functional brain information within these key canonical networks. In summary, measuring multiscale functional network energy offered insights into the stability of canonical brain networks associated with subjects born prematurely. These findings enhance our understanding of how early birth impacts brain development.

早产的婴儿可能会经历大脑连接的改变,部分原因是分娩时大脑发育不完全。研究还表明,与出生时就完全成熟的同龄人相比,这些人进入青春期后,大脑结构和功能上的差异会持续存在。在这项研究中,我们对来自青少年大脑认知发展(ABCD)研究的大约4600名早产或足月出生的青少年进行了多尺度功能连接的功能网络能量检测。我们确定了三个关键的大脑网络,显示出早产儿和足月受试者之间网络能量的显著差异。这些网络包括视觉网络(包括枕颞和枕叶子网络)、感觉运动网络和高级认知网络(包括颞顶叶和额叶子网络)。此外,研究表明,与早产儿相比,足月受试者表现出更大的不稳定性,导致大脑功能信息的动态重构和三个确定的规范大脑网络的灵活性增加。相比之下,早产儿表现出更稳定的网络,但在这些关键的规范网络中,功能大脑信息的动态和灵活组织较少。总之,测量多尺度功能网络能量提供了对与早产儿相关的规范脑网络稳定性的见解。这些发现增强了我们对早产如何影响大脑发育的理解。
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引用次数: 0
Topological Time Frequency Analysis of Functional Brain Signals. 脑功能信号的拓扑时频分析。
Moo K Chung, Aaron F Struck

We present a novel topological framework for analyzing functional brain signals using time-frequency analysis. By integrating persistent homology with time-frequency representations, we capture multi-scale topological features that characterize the dynamic behavior of brain activity. This approach identifies 0D (connected components) and 1D (loops) topological structures in the signal's time-frequency domain, enabling robust extraction of features invariant to noise and temporal misalignments. The proposed method is demonstrated on resting-state functional magnetic resonance imaging (fMRI) data, showcasing its ability to discern critical topological patterns and provide insights into functional connectivity. This topological approach opens new avenues for analyzing complex brain signals, offering potential applications in neuroscience and clinical diagnostics.

我们提出了一种新的拓扑框架,用于分析功能性脑信号的时频分析。通过将持续同源性与时频表示相结合,我们捕获了表征大脑活动动态行为的多尺度拓扑特征。该方法在信号的时频域中识别0D(连接分量)和1D(环路)拓扑结构,从而能够鲁棒地提取不受噪声和时间失调影响的特征。该方法在静息状态功能磁共振成像(fMRI)数据上进行了验证,展示了其识别关键拓扑模式的能力,并提供了对功能连接的见解。这种拓扑方法为分析复杂的大脑信号开辟了新的途径,在神经科学和临床诊断中提供了潜在的应用。
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引用次数: 0
A Deep Learning Framework for Multi-Source EEG Localization. 多源脑电定位的深度学习框架。
C Buda, B Gambosi, N Toschi, L Astolfi

Electroencephalography (EEG) provides millisecond-scale resolution of neural activity but struggles to accurately localize multiple concurrent sources, especially in spatially close regions. Classical linear inverse methods, such as MNE, sLORETA, and dSPM, address the ill-posed inverse problem through regularization but often exhibit a "single-source bias", suppressing smaller generators. This paper introduces a deep learning framework designed to robustly identify multiple sources of activity from short EEG segments. Our approach leverages a realistic simulation pipeline that systematically generates EEG recordings from physiologically plausible, distributed current sources. We train a convolutional neural network (ConvNET) on thousands of such simulations, ensuring generalization by using a forward model distinct from that of classical solvers, thereby minimizing the risk of an "inverse crime". We evaluate our ConvNet against nine well-established inverse solvers (MNE, dSPM, sLORETA, eLORETA, LORETA, LAURA, and depth-weighted variants). Benchmarking across multiple synthetic test scenarios demonstrates that our method consistently outperforms traditional solvers, particularly in resolving closely spaced sources, while maintaining or improving accuracy for single-source cases. These results highlight the potential of deep learning to overcome biases in EEG source imaging, offering a more reliable approach for multi-source localization.Clinical relevance- By leveraging deep learning, our approach improves localization accuracy, particularly in closely spaced or deep brain sources, potentially enhancing presurgical planning, brain-computer interfaces, and real-time neurofeed-back applications.

脑电图(EEG)提供毫秒级的神经活动分辨率,但难以准确定位多个并发源,特别是在空间接近的区域。经典的线性逆方法,如MNE、sLORETA和dSPM,通过正则化解决不适定逆问题,但往往表现出“单源偏差”,抑制了较小的生成器。本文介绍了一种深度学习框架,旨在从短脑电图片段中鲁棒地识别多个活动源。我们的方法利用了一个现实的模拟管道,系统地从生理上合理的分布式电流源生成脑电图记录。我们在数千个这样的模拟中训练卷积神经网络(ConvNET),通过使用与经典解算器不同的前向模型来确保泛化,从而将“逆犯罪”的风险降至最低。我们针对九种成熟的反求解器(MNE、dSPM、sLORETA、eLORETA、LORETA、LAURA和深度加权变体)评估了我们的ConvNet。跨多个综合测试场景的基准测试表明,我们的方法始终优于传统的求解器,特别是在解决紧密间隔的源时,同时保持或提高了单源情况的准确性。这些结果突出了深度学习在克服脑电源成像偏差方面的潜力,为多源定位提供了更可靠的方法。临床相关性-通过利用深度学习,我们的方法提高了定位准确性,特别是在紧密间隔或深部脑源中,潜在地增强了手术前计划,脑机接口和实时神经反馈应用。
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引用次数: 0
Analysis of Bending Energy of the Nuclei Object in the Fluorescence Images for the Assessment of Drug Induced Changes in Lung Cancer Cells. 荧光图像中核靶的弯曲能分析用于评估药物诱导肺癌细胞变化。
Swetha Thudukuchi Thulasiraman, Sreelekshmi Palliyil Sreekumar, Ramakrishnan Swaminathan

Characterization of drug-induced changes in the cancerous cells is important in improving the efficacy of chemotherapeutic drugs and for personalized medicine. This study analyzes the morphological changes in the nuclei objects of cells treated with the drugs targeting Aurora Kinase (AURK) gene family. For this, fluorescence images of lung cancer cell line treated with AMG900 are obtained from a publicly available database. The images are pre-processed and segmented to separate the nuclei objects from the background. Nuclear boundaries are detected, and various shape descriptors, including eccentricity, circularity, convexity, bending energy, and area are computed to comprehensively analyze the drug-induced changes in nuclear morphology. The obtained results show that the bending energy demonstrated high consistency and sensitivity in capturing nuclei irregularities compared to other shape-based metrics, with the highest mean value of 6.71. Nuclei object with a maximum value of bending energy 8.69 exhibit significant boundary variations with increased area and a minimum value of 2 with smooth curvatures. The statistical analysis of the bending energy variations across four replicates resulted in mean bending energies of 6.7, 6.8, 6.5, and 6.5 which indicates the replicate matching morphologies with confirmed reproducibility. Thus, bending energy has proved to be an effective and reliable parameter for measuring the nuclear membrane irregularities in lung cancer cell lines due to chemical or genetic perturbations.Clinical relevance- This irregularity measure can be employed for biocompatibility testing in the standardization of biomedical devices.

表征药物诱导的癌细胞变化对提高化疗药物的疗效和个性化治疗具有重要意义。本研究分析了以极光激酶(AURK)基因家族为靶点的药物对细胞核靶的形态学改变。为此,用AMG900处理过的肺癌细胞系的荧光图像是从一个公开的数据库中获得的。对图像进行预处理和分割,将核心目标从背景中分离出来。检测核边界,计算各种形状描述符,包括偏心率、圆度、凸度、弯曲能和面积,综合分析药物引起的核形态变化。结果表明,与其他基于形状的指标相比,弯曲能在捕获核不规则性方面具有较高的一致性和灵敏度,其最高平均值为6.71。弯曲能最大值为8.69的核物体随着面积的增加,边界变化明显,曲率光滑的核物体弯曲能最小值为2。对4个重复的弯曲能变化进行统计分析,平均弯曲能分别为6.7、6.8、6.5和6.5,表明重复形态匹配,具有重复性。因此,弯曲能已被证明是测量肺癌细胞系由于化学或遗传扰动引起的核膜不规则性的有效和可靠的参数。临床相关性-此不规则性测量可用于生物医学设备标准化中的生物相容性测试。
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引用次数: 0
A Deep Learning Method for Autism Spectrum Disorder Classification Based on Multimodal Neuroimaging Data. 一种基于多模态神经影像数据的自闭症谱系障碍分类深度学习方法。
Xiaowen Liu, Bing Niu, Tiancheng Cao, Fuxue Chen

Autism Spectrum Disorder (ASD) is a neurodevelopmental disorder characterized by impairments in social interaction and communication skills. Accurate, early-stage differentiation of individuals with ASD from typically developing controls (TC) is essential for timely intervention and treatment. In this paper, we propose a predictive model based on multimodal feature fusion, using both functional magnetic resonance imaging (fMRI) and structural magnetic resonance imaging (sMRI) data to improve the classification of ASD. By integrating complementary information from these two modalities, our method constructs a more comprehensive feature space, capturing complex neuropathological signatures that a single modality cannot provide. We evaluated the proposed approach using imaging data from the ABIDE NYU site under a five-fold cross-validation scheme. The experimental results show that the proposed method achieved an average accuracy of 82.63%, an area under the receiver operating characteristic curve (AUC) of 89.31%, a sensitivity of 81.45%, and a specificity of 82.86%. These findings suggest that the proposed multimodal feature fusion strategy significantly enhances ASD identification, offering a promising approach to the precise diagnosis of brain disorders.Clinical Relevance- We proposed a learning framework that integrates multi-modality neuroimaging data, addressing the heterogeneity of ASD-related brain features and the challenges posed by limited training data. This framework contributes to improving diagnostic accuracy and supports early clinical decision-making for ASD, thereby facilitating timely intervention and the development of personalized treatment strategies in clinical practice.

自闭症谱系障碍(ASD)是一种以社会交往和沟通能力障碍为特征的神经发育障碍。准确、早期区分ASD个体与典型发展对照(TC)对于及时干预和治疗至关重要。本文提出了一种基于多模态特征融合的预测模型,利用功能磁共振成像(fMRI)和结构磁共振成像(sMRI)数据来改进ASD的分类。通过整合这两种模式的互补信息,我们的方法构建了一个更全面的特征空间,捕获了单一模式无法提供的复杂神经病理特征。我们在五倍交叉验证方案下使用来自NYU网站的成像数据来评估所提出的方法。实验结果表明,该方法平均准确率为82.63%,受试者工作特征曲线下面积(AUC)为89.31%,灵敏度为81.45%,特异性为82.86%。这些发现表明,所提出的多模态特征融合策略显著提高了ASD的识别,为脑部疾病的精确诊断提供了一种有希望的方法。临床相关性-我们提出了一个整合多模态神经影像学数据的学习框架,解决asd相关大脑特征的异质性和有限训练数据带来的挑战。该框架有助于提高诊断准确性,支持ASD的早期临床决策,从而促进临床实践中及时干预和制定个性化治疗策略。
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引用次数: 0
A Device for Automatic Punch Biopsy and Simultaneous Wound Closure. 一种自动穿刺活检和同时缝合伤口的装置。
Arbri Kopliku, Jack Chen, Yubin Cai, Keenan Fronhofer, Eleni Chatzilakou, Jay Connor, Erica Dommasch, David G Li, Elena Kalodner-Martin, Ali K Yetisen, Giovanni Traverso

Punch biopsy is a skin biopsy method that is used to remove a small sample of the epidermis and dermis. The procedure requires a trained dermatologist to excise the sample with a punch biopsy tool and then immediately apply sutures for wound closure. Punch biopsy is a common procedure necessary for the diagnosis of many conditions. Thus, the present shortage of dermatologists-especially in the developing world-motivates the design of convenient methods for punch biopsy that do not require clinical training. Here, we present a medical device that streamlines punch biopsy and wound closure into simple, sequential operations. The handheld device engages and securely locks the skin, excises the biopsy sample, then applies a N-butyl cyanoacrylate tissue adhesive for wound closure. The device is validated ex vivo using porcine ear skin, which has comparable biomechanical properties to human skin. For engagement, the device can target the desired biopsy area with an accuracy of 2 mm. For sample collection, the device reliably excises samples 7 mm in diameter and 4 mm in depth. For wound closure, the device streamlines the application of tissue adhesive to seal the wound, albeit with less strength than surgical sutures. Altogether, these results validate the design of a device for punch biopsy and wound closure that can be used within sequential steps with minimal training.

穿孔活检是一种皮肤活检方法,用于去除表皮和真皮层的小样本。这个过程需要一个训练有素的皮肤科医生用穿刺活检工具切除样本,然后立即缝合伤口。穿孔活检是一种常见的程序,必要的诊断许多条件。因此,目前皮肤科医生的短缺——尤其是在发展中国家——促使人们设计出不需要临床培训的方便的穿孔活检方法。在这里,我们提出了一种医疗设备,将穿孔活检和伤口闭合简化为简单的顺序操作。手持式设备接合并安全地锁定皮肤,切除活检样本,然后应用n -氰基丙烯酸酯丁酯组织粘合剂缝合伤口。该装置使用猪耳皮肤进行体外验证,猪耳皮肤具有与人类皮肤相当的生物力学特性。对于接触,该设备可以以2毫米的精度瞄准所需的活检区域。对于样品收集,该设备可靠地切除直径为7毫米,深度为4毫米的样品。对于伤口闭合,该设备简化了组织粘合剂的应用来密封伤口,尽管强度低于手术缝合。总之,这些结果验证了穿孔活检和伤口闭合装置的设计,该装置可以在最少的训练下连续步骤使用。
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引用次数: 0
A System Theoretic Oriented Model to Investigate the Dynamics Correlating Respiration and Hearth Rate Variability. 一个以系统理论为导向的模型来研究呼吸和心脏率变异的动态关系。
Rita Granata, Luisa Erzingher, Sabrina Mosca, Vittorio Santoriello, Michela Russo, Leandro Donisi, Maria Romano, Francesco Amato, Alfonso Maria Ponsiglione

Studying the interplay between respiration patterns and the heart rate variability (HRV) through mathematical models led to valuable insights into autonomic nervous system (ANS) functioning. Despite several models have been proposed in the literature, there is a lack of a general mathematical framework based on systems theory and formulated according to a rigorous control theory formalism. This work aims to reframe existing cardiopulmonary models into a general finite-dimensional nonlinear time-invariant (FDNTI) framework to capture respiration-cardiovascular interactions. A MATLAB Simulink-based implementation is presented and a simulation study is carried out. By exploiting control theory formalism, a system theoretic oriented model is obtained, which addresses roles of state variables, inputs, and linear/nonlinear contributions. Simulation tests confirmed the validity of the proposed modeling approach. This generalized formulation could enable in-depth analysis of physiological and pathological states by adopting advanced control theory techniques to investigate stability properties of the cardiorespiratory system.Clinical relevance- An in-silico model of respiration-cardiovascular interactions for assessing autonomic functioning.

通过数学模型研究呼吸模式和心率变异性(HRV)之间的相互作用,可以对自主神经系统(ANS)的功能产生有价值的见解。尽管文献中已经提出了几个模型,但缺乏一个基于系统理论的通用数学框架,并根据严格的控制理论形式主义来制定。这项工作旨在将现有的心肺模型重新构建为一般有限维非线性时不变(FDNTI)框架,以捕获呼吸-心血管相互作用。提出了基于MATLAB simulink的实现方案,并进行了仿真研究。通过利用控制理论的形式主义,获得了一个面向系统理论的模型,该模型解决了状态变量、输入和线性/非线性贡献的作用。仿真试验验证了所提建模方法的有效性。通过采用先进的控制理论技术来研究心肺系统的稳定性,可以对生理和病理状态进行深入的分析。临床相关性-用于评估自主神经功能的呼吸-心血管相互作用的计算机模型。
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引用次数: 0
Beyond Frequency: Leveraging Spatial Features in SSVEP-Based Brain-Computer Interfaces with Visual Animations. 超越频率:利用基于ssvep的脑机接口与视觉动画的空间特征。
Yike Sun, Ziyu Zhang, Qi Qi, Xiaoyang Li, Jingnan Sun, Kemeng Zhang, Jiaxiang Zhuang, Xiaogang Chen, Xiaorong Gao

Current research on steady-state visual evoked potential (SSVEP)-based brain-computer interfaces (BCIs) predominantly focuses on utilizing the frequency- and phase-locking characteristics of SSVEP for encoding purposes. In this study, we propose an innovative paradigm wherein SSVEP serves as a marker, integrated with different types of motion animations to identify distinct neural processing pathways associated with these animations. This approach enables the classification of SSVEP-based BCIs without relying on frequency features. We designed six distinct animations corresponding to six behaviors commonly observed in daily life. Each animation was tagged with a uniform 6 Hz stimulus frequency, forming a six-target classification task. Offline testing was conducted with 10 participants. Despite identical frequency components, significant differences in spatial distribution corresponding to the animations were observed, likely due to the behavioral variations in the animations. Classification analysis demonstrated an accuracy of 0.93 within a 6-second window, validating the practical feasibility of this approach. This paradigm offers a novel direction for the advancement of SSVEP-based BCIs, potentially enabling the integration of multi-sensory information.

目前基于稳态视觉诱发电位(SSVEP)的脑机接口研究主要集中在利用SSVEP的锁频和锁相特性进行编码。在这项研究中,我们提出了一个创新的范例,其中SSVEP作为一个标记,与不同类型的运动动画相结合,以识别与这些动画相关的不同神经处理途径。这种方法使得基于ssvep的bci的分类不依赖于频率特征。我们针对日常生活中常见的六种行为设计了六个不同的动画。每个动画都用统一的6hz刺激频率标记,形成一个六目标分类任务。线下测试共10人。尽管频率成分相同,但在与动画对应的空间分布上却存在显著差异,这可能是由于动画中的行为差异。分类分析表明,在6秒窗口内,准确率为0.93,验证了该方法的实际可行性。这种模式为基于ssvep的脑机接口的发展提供了一个新的方向,有可能实现多感官信息的整合。
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引用次数: 0
A Hybrid Deep Learning Model for Sleep Staging with Multi-Domain Feature Fusion from Single-Channel EEG. 基于多域特征融合的单通道脑电睡眠分期混合深度学习模型。
Xinlei Zhang, Junwei Ma, Keifei Liu, Wanqi Chen, Kang Ding, Shuangyuan Yang, Fan Li, Fengyu Cong

Automatic sleep staging typically requires multi-channel EEG data, limiting its application in portable devices. To address this, we propose a hybrid deep learning model that utilizes multi-domain features from single-channel EEG data collected via polysomnography (PSG). Our model employs two feature extractors to capture time-domain and time-frequency-domain features, which are fused for final predictions. Validated on the Haaglanden Medisch Centrum Sleep Centre Database (HMC) with EEG data from 151 subjects, the model achieves an accuracy of 0.747 and an F1 score of 0.742. Compared to state-of-the-art methods, it shows improved multi-classification performance, particularly in N3 stage detection. This study highlights the potential of single-channel EEG for accurate sleep staging and the development of portable PSG-based monitoring systems.Clinical Relevance-This study develops a deep learning model for automatic sleep staging only using a single-channel EEG. Our research would be helpful to automatically classify stages during sleep for sleep physicians.

自动睡眠分期通常需要多通道脑电图数据,限制了其在便携式设备中的应用。为了解决这个问题,我们提出了一种混合深度学习模型,该模型利用了通过多导睡眠图(PSG)收集的单通道EEG数据的多域特征。我们的模型采用两个特征提取器来捕获时域和时频域特征,并将其融合以进行最终预测。在Haaglanden Medisch Centrum Sleep Centre Database (HMC)中使用151名受试者的EEG数据进行验证,该模型的准确率为0.747,F1得分为0.742。与最先进的方法相比,该方法具有更好的多分类性能,特别是在N3阶段检测方面。这项研究强调了单通道脑电图在精确睡眠分期和便携式psg监测系统开发方面的潜力。临床意义:本研究开发了一种深度学习模型,仅使用单通道脑电图进行自动睡眠分期。我们的研究将有助于睡眠医生对睡眠阶段进行自动分类。
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引用次数: 0
A Joint Optimization Guided Deep Learning Model based on CNN and Channel-Wise Transformers for Robust Sleep Stage Classification from EEG Signal. 基于CNN和Channel-Wise变压器的联合优化引导深度学习模型在脑电信号鲁棒睡眠阶段分类中的应用。
Angkon Deb, Celia Shahnaz, Mohammad Saquib

Sleep stage classification is a critical task in sleep research, with significant implications for diagnosing and treating sleep disorders. Traditional methods rely on manual scoring of polysomnography (PSG) data, which is time-consuming and prone to human error. While recent advances in deep learning have enabled automated sleep stage classification, challenges persist in handling the complex, non-linear patterns of physiological signals. Existing models are often computationally expensive, require sophisticated feature extraction methods, and are unsuitable for real-time implementation. To address these limitations, we propose a lightweight and efficient dual-branch deep-learning model that leverages the feature extraction capabilities of CNNs and the channel-wise attention mechanisms of Transformers. Unlike conventional transformers, it avoids excessive computational complexity while effectively capturing both local and global dependencies in physiological signals. The model is validated on four benchmark datasets-SleepEDF-20, SleepEDF-78, SleepEDFx, and SHHS-and demonstrates superior performance compared to several baseline algorithms. Our proposed algorithm achieves state-of-the-art results across all datasets, highlighting its robustness and scalability for real-world applications. The code for the proposed algorithm is publicly available at link, enabling reproducibility and further research. Combining the strengths of CNNs and Transformers, it offers a promising solution for accurate and efficient sleep stage classification, paving the way for improved diagnosis and treatment of sleep disorders. The code is available at https://github.com/ang-frozen/embc2025.

睡眠阶段分类是睡眠研究中的一项重要任务,对睡眠障碍的诊断和治疗具有重要意义。传统的方法依赖于人工对多导睡眠图(PSG)数据进行评分,这既耗时又容易出现人为错误。虽然深度学习的最新进展使自动睡眠阶段分类成为可能,但在处理复杂的、非线性的生理信号模式方面仍然存在挑战。现有模型通常计算成本高,需要复杂的特征提取方法,并且不适合实时实现。为了解决这些限制,我们提出了一种轻量级和高效的双分支深度学习模型,该模型利用cnn的特征提取能力和Transformers的通道智能注意机制。与传统的变压器不同,它避免了过度的计算复杂性,同时有效地捕获生理信号中的局部和全局依赖关系。该模型在四个基准数据集(sleeppedf -20、sleeppedf -78、sleeppedfx和shhs)上进行了验证,与几种基准算法相比,该模型表现出了优越的性能。我们提出的算法在所有数据集上实现了最先进的结果,突出了其在现实世界应用中的鲁棒性和可扩展性。所提出的算法的代码可以在链接上公开获得,从而实现可重复性和进一步的研究。它结合了cnn和transformer的优势,为准确高效的睡眠阶段分类提供了一个有前景的解决方案,为改善睡眠障碍的诊断和治疗铺平了道路。代码可在https://github.com/ang-frozen/embc2025上获得。
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引用次数: 0
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Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference
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