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Combined Anomaly Features and Interictal Epileptiform Discharges for Effective Seizure Onset Zone Localization. 联合异常特征和发作间期癫痫样放电对有效发作区定位的影响。
Nawara Mahmood Broti, Masaki Iwasaki, Yumie Ono

Epilepsy, a prevalent neurological disease, often requires accurate identification of the seizure onset zone (SOZ) in the brain for successful surgical removal of this region. SOZ identification is a lengthy process that traditionally relies on the knowledge and experience of the neurosurgeon. Advancements in artificial intelligence have opened the door to automatic SOZ localization. This study proposes the application of autoencoder-based anomaly detection in SOZ electrode classification for the first time. We trained the autoencoder in a leave-one-patient-out manner with electrocorticography (ECoG) signals from intact channels. The anomaly feature was determined by the maximum error between original and reconstructed signals for each channel of the test patient. We investigated the usefulness of anomaly features along with the interictal epileptiform discharge (IED) biomarker feature. A linear support vector machine classifier achieved 70.49% accuracy with the anomaly feature, 64.71% accuracy with IED feature, and 74.44% accuracy with combined anomaly and IED features. The study demonstrates the effectiveness of anomaly detection in the direct localization of SOZs and suggests that multiple biomarker features can enhance automatic SOZ localization performance.Clinical Relevance- This study demonstrates the clinical relevance of using anomaly features from ECoG data for efficient SOZ localization. It highlights the effectiveness of combining anomaly features with IED biomarkers to enhance the automatic SOZ classification performance and improve surgical planning in epilepsy treatment.

癫痫是一种常见的神经系统疾病,通常需要准确识别大脑中的癫痫发作区(SOZ),才能成功地进行手术切除该区域。SOZ的识别是一个漫长的过程,传统上依赖于神经外科医生的知识和经验。人工智能的进步为自动定位SOZ打开了大门。本研究首次提出了基于自编码器的异常检测在SOZ电极分类中的应用。我们用来自完整通道的皮质电图(ECoG)信号以留一个病人的方式训练自编码器。通过检测患者各通道原始信号与重构信号之间的最大误差确定异常特征。我们研究了异常特征以及癫痫样放电(IED)生物标志物特征的有效性。线性支持向量机分类器对异常特征的准确率为70.49%,对IED特征的准确率为64.71%,对异常与IED特征结合的准确率为74.44%。该研究证明了异常检测在SOZ直接定位中的有效性,并表明多种生物标志物特征可以增强SOZ自动定位的性能。临床相关性-本研究证明了利用ECoG数据中的异常特征进行有效SOZ定位的临床相关性。强调了异常特征与IED生物标志物相结合在癫痫治疗中提高SOZ自动分类性能和改善手术计划方面的有效性。
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引用次数: 0
Dose-Dependent Regional Synchronicity Changes Using Weighted Phase Lag Index: Towards Optimizing Vagus Nerve Stimulation Titration Process. 使用加权相位滞后指数的剂量依赖性区域同步性变化:优化迷走神经刺激滴定过程。
Paloma Carcamo Cerda, Pablo Aqueveque, Antoine Nonclercq, Riem El Tahry, Enrique Germany

Vagus Nerve Stimulation (VNS) is an effective therapy for drug-resistant epilepsy (DRE), but its efficacy varies across individuals. This study uses the weighted Phase Lag Index (wPLI) across multiple frequency bands to examine the dose-dependent regional brain synchronization effect at an individual level. EEG data from four DRE patients (two responders and two non-responders) were analyzed under controlled VNS intensities. Results show that non-responders exhibit an increased synchrony at higher intensity levels, particularly in the beta band and the broadband. Findings highlight individualized neural responses to VNS, underscoring the possibility for personalized stimulation strategies to optimize therapy.Clinical Relevance- Refining the VNS titration process through dose-dependent brain connectivity analysis could accelerate optimization, improving therapeutic outcomes and personalization for drug-resistant epilepsy patients.

迷走神经刺激(VNS)是治疗耐药癫痫(DRE)的有效方法,但其疗效因人而异。本研究使用加权相位滞后指数(wPLI)跨多个频带来检验个体水平上剂量依赖的区域脑同步效应。在控制VNS强度下分析4例DRE患者(2例有反应者和2例无反应者)的脑电图数据。结果表明,无反应者在更高的强度水平上表现出更高的同步性,特别是在β波段和宽带。研究结果强调了对VNS的个性化神经反应,强调了个性化刺激策略优化治疗的可能性。临床相关性-通过剂量依赖性脑连通性分析来完善VNS滴定过程可以加速优化,改善治疗结果和耐药性癫痫患者的个性化。
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引用次数: 0
Deep-Meg: A deep learning approach for magnetoencephalograhic inverse problem solutions. deep - meg:一种用于脑磁图逆问题解决方案的深度学习方法。
Stefano Franceschini, Michele Ambrosanio, Maria Maddalena Autorino, Fabio Baselice

This manuscript introduces a deep learning algorithm designed for spatial and temporal source reconstruction based on signals captured by MEG devices. Estimating brain signals at the source level is a significant challenge in magnetoencephalographic (MEG) data processing. Traditional algorithms excel in temporal resolution but face limitations in spatial resolution due to the inherently ill-posed nature of the problem. However, precise localization of pathological tissues is often crucial for providing reliable information to clinicians, which makes this a key area for improvement. Deep learning solutions have emerged as promising candidates for high-resolution signal estimation in this context. The proposed approach, called 'Deep-MEG', utilizes a hybrid neural network architecture capable of extracting both temporal and spatial information from MEG sensor signals. Unlike traditional methods, the algorithm can handle the entire brain, making it suitable for imaging not just cortical sources but also subcortical ones. To validate its performance, the authors conducted simulations with multiple active sources using a realistic forward model and compared the results with those from various state-of-the-art reconstruction algorithms.Clinical relevance- This study represent a first approach for accurate deep source localization and reconstruction leading to diagnosis support to clinicians.

本文介绍了一种基于MEG设备捕获的信号进行时空源重构的深度学习算法。在脑磁图(MEG)数据处理中,在源水平估计脑信号是一个重大挑战。传统算法在时间分辨率方面表现优异,但由于问题固有的病态性,在空间分辨率方面存在局限性。然而,病理组织的精确定位对于向临床医生提供可靠的信息至关重要,这使得这成为一个关键的改进领域。在这种情况下,深度学习解决方案已经成为高分辨率信号估计的有希望的候选者。该方法被称为“Deep-MEG”,利用混合神经网络架构,能够从MEG传感器信号中提取时间和空间信息。与传统方法不同,该算法可以处理整个大脑,使其不仅适用于皮质源成像,也适用于皮质下源成像。为了验证其性能,作者使用现实正演模型对多个有源进行了模拟,并将结果与各种最先进的重建算法进行了比较。临床相关性-这项研究代表了准确的深源定位和重建的第一种方法,从而为临床医生提供诊断支持。
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引用次数: 0
Enhancing Colon Cancer Risk Prediction in Machine Learning Models using Polygenic Risk Scores. 使用多基因风险评分在机器学习模型中增强结肠癌风险预测。
Kyungbeom Kim, Harinishree Sathu, Andrew Hornback, Monica Isgut, Joshua Traynelis, May D Wang

Colon cancer is one of the deadliest types of cancer in the United States, with close to 50,000 projected deaths in 2024. The disease requires early diagnosis to optimize chances of survival by enabling timely administration of treatment. To investigate the key non-genetic (NG) factors influencing the onset of colon cancer and evaluate how genetic factors enhance the performance of machine learning (ML) models in predicting incidence, we incorporated polygenic risk scores (PRSs) alongside NG data in ML models to predict 10-year incident risk prediction of colon cancer using data from the UK Biobank. This approach enabled us to assess the added predictive value of PRSs in multi-modal models in estimating the 10-year risk of developing colon cancer over NG data alone. Moreover, our research focused on identifying the most relevant and predictive PRS and validating them using a robust ML framework. To ensure the robustness, we restricted the cohort to White British individuals to minimize ancestry-related heterogeneity. PRSs have proven effective in enhancing disease prediction for conditions such as breast cancer, myocardial infarction, and schizophrenia, reinforcing their relevance in clinical research. Exploring six PRSs, our goal was to minimize false negatives while simultaneously maximizing area under the receiver-operating characteristic curve (AUC), in order to improve early detection rates by identifying those who are at risk for colon cancer. This research shows that PRSs can be used to enhance overall predictive ability of ML models in colon cancer research over NG factors alone, bolstering the argument for incorporating PRSs into routine clinical practice. PRSs can also help minimize false negatives, a key feature for disease prediction models, as missed potential diagnoses are life-threatening.

结肠癌是美国最致命的癌症之一,预计到2024年将有近5万人死于结肠癌。这种疾病需要早期诊断,以便通过及时给予治疗来优化生存机会。为了研究影响结肠癌发病的关键非遗传(NG)因素,并评估遗传因素如何增强机器学习(ML)模型在预测发病率方面的性能,我们将多基因风险评分(prs)与ML模型中的NG数据结合起来,使用英国生物银行的数据预测结肠癌10年事件风险预测。这种方法使我们能够评估多模式模型中PRSs的附加预测价值,以估计10年患结肠癌的风险,而不是单独的NG数据。此外,我们的研究重点是识别最相关和最具预测性的PRS,并使用强大的ML框架验证它们。为了确保稳健性,我们将队列限制为英国白人个体,以尽量减少与祖先相关的异质性。PRSs已被证明在加强乳腺癌、心肌梗死和精神分裂症等疾病的疾病预测方面是有效的,加强了它们在临床研究中的相关性。我们探索了6种PRSs,目的是在最大限度地减少假阴性的同时,最大化受者工作特征曲线(AUC)下的面积,从而通过识别结肠癌风险来提高早期检出率。本研究表明,PRSs可用于提高ML模型在结肠癌研究中的整体预测能力,而不是单独的NG因素,这支持了将PRSs纳入常规临床实践的观点。prs还可以帮助最大限度地减少假阴性,这是疾病预测模型的一个关键特征,因为漏诊可能危及生命。
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引用次数: 0
Do Larger Resections Cut It? Relating Temporal Lobe Epilepsy Surgery and Seizure Outcome. 大手术能成功吗?有关颞叶癫痫手术和癫痫发作结果。
Callum M Simpson, Jonathan Horsley, Vytene Janiukstyte, Jane de Tisi, Anna Miserocchi, Andrew McEvoy, Yujiang Wang, John S Duncan, Peter N Taylor

Anterior temporal lobe resection (ATLR) results in seizure freedom in half of individuals with drug-resistant temporal lobe epilepsy (TLE). Some investigators have suggested that larger resections lead to greater chance of seizure freedom, while others report no relationship. In this study, we examine the relationship between resection size and seizure freedom through (i) total volume analysis and (ii) a mass univariate regional approach.Patient demographics and resection volumes were collected for 283 patients who underwent subsequent ATLR, and seizure freedom was measured after 12 months. Additionally, the percentage resection of each Desikan-Kiliany parcellated region was calculated. We computed the AUC to measure effect sizes and used Wilcoxon ranksum tests to assess significance.Total resection volumes were larger in males than females, and larger in right than left ATLR. However, when scaled to percentage of brain tissue resected, only the hemisphere difference remained. There was no significant association of total or regional resection volume with post-operative seizure freedom.Larger resections in males are due to their larger total brain volumes. Smaller left-sided resections reflect the more conservative surgical approach in the language dominant hemisphere. Within the normal ranges of a typical ATLR, larger resection volumes do not increase chance of seizure-freedom. Future studies should investigate the details of the resection of gray matter, such as piriform cortex, and white matter tracts that can form epileptogenic networks.

前颞叶切除术(ATLR)可使一半的耐药颞叶癫痫(TLE)患者免于癫痫发作。一些研究人员认为,更大的切除导致癫痫发作自由的可能性更大,而另一些人则认为没有关系。在这项研究中,我们通过(i)总体积分析和(ii)大规模单变量区域方法来检查切除大小和癫痫发作自由之间的关系。收集了283例后续ATLR患者的患者人口统计数据和切除体积,并在12个月后测量癫痫发作自由度。此外,计算每个Desikan-Kiliany分割区域的切除百分比。我们计算AUC来测量效应大小,并使用Wilcoxon秩和检验来评估显著性。男性总切除体积大于女性,右侧ATLR大于左侧ATLR。然而,当按比例计算脑组织切除的百分比时,只有半球的差异仍然存在。总切除量或局部切除量与术后癫痫发作自由度无显著相关性。男性更大的切除是由于他们的总脑容量更大。较小的左侧切除反映了在语言优势半球更保守的手术方法。在典型ATLR的正常范围内,较大的切除体积不会增加癫痫发作自由的机会。未来的研究应该研究切除灰质的细节,如梨状皮质和白质束,它们可以形成致癫痫网络。
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引用次数: 0
Diffusion Model-Based Displacement Field Generation for 4D-CT Chest Image Generation. 基于扩散模型的4D-CT胸部图像置换场生成。
Miki Kanamuro, Hideaki Hirashima, Mitsuhiro Nakamura, Megumi Nakao

Acquisition of data on respiratory motion and anatomical deformation at the individual level is essential for improving the accuracy of surgical procedures and radiotherapy. Although time-series imaging using three-dimensional (3D) computed tomography (CT) and deep learning-based image interpolation have been explored, the acquisition of multiple imaging volumes remains a significant burden on patients because of breath-holding requirements and additional radiation exposure. In this study, we propose a framework for four-dimensional (4D) CT image generation, with images being generated at different time phases from a single-phase 3D chest CT image using only the magnitude of displacement. To achieve this, we employ a conditional diffusion model to generate displacement vector fields (DVFs) and propose a model that incorporates the initial-phase CT image and the mean DVF of the target phase as guidance. We trained and tested the proposed model using 4D-CT images from 62 cases and evaluated its effectiveness by deforming the 3D-CT image at the end-expiration phase using the predicted DVF. The validity of our approach was confirmed through quantitative comparisons under multiple guidance scenarios.Clinical Relevance- The proposed diffusion model predicts Deformation Vector Fields (DVFs) that capture respiratory motion, thereby enabling the generation of 3D-CT images at different respiratory phases from a single-phase CT scan. This approach could be directly applied to radiotherapy planning and we expect that it could improve radiation targeting accuracy.

在个体水平上获取呼吸运动和解剖变形的数据对于提高外科手术和放疗的准确性至关重要。尽管已经探索了使用三维(3D)计算机断层扫描(CT)和基于深度学习的图像插值的时间序列成像,但由于需要屏气和额外的辐射暴露,获取多个成像体积仍然是患者的重大负担。在这项研究中,我们提出了一个四维(4D) CT图像生成框架,该框架仅使用位移大小从单相3D胸部CT图像在不同的时间阶段生成图像。为了实现这一点,我们采用条件扩散模型来生成位移矢量场(DVF),并提出了一个将初始相位CT图像和目标相位的平均DVF作为指导的模型。我们使用来自62个病例的4D-CT图像训练和测试了所提出的模型,并通过使用预测的DVF在到期末阶段对3D-CT图像进行变形来评估其有效性。通过多个指导情景下的定量比较,验证了该方法的有效性。临床相关性-提出的扩散模型预测捕捉呼吸运动的变形向量场(dvf),从而能够从单相CT扫描中生成不同呼吸期的3D-CT图像。该方法可直接应用于放疗计划,并有望提高放疗的靶向精度。
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引用次数: 0
Developing an Endometrium-on-a-Chip Model to Explore Biological Mechanisms in the Peri-implantation Period of Pregnancy. 构建子宫内膜芯片模型探讨妊娠围着床期的生物学机制。
Delanyo Kpeglo, Parisa Noohi, Haidee Tinning, Samantha Gardner, Niamh Forde, Virginia Pensabene

The peri-implantation period of pregnancy in mammals is a critical stage for successful embryo implantation and offspring health. Significant molecular and biophysical interactions occur between the mother (uterine endometrium) and the embryo during this time. However, the underlying biological mechanisms contributing to pregnancy success, loss, or repercussions for offspring health remain unclear. Organ-ona-chip technology facilitates in vitro models of physiological cell and tissue environments in 3D, accurately replicating the behaviour of cells and tissues with appropriate flow conditions as observed in vivo. This study presents microfluidic devices designed to create an endometrium-on-a-chip to investigate mechanisms involved in successful pregnancy during the peri-implantation period. We assessed the channels' appropriate flow rate conditions, the devices' suitability for cell culture, and a suitable culture medium to maintain different endometrial cell types together in the devices. An in vivo culture model that recapitulates the complexities of the endometrial tissue will support effective studies and enhance our understanding of the mechanisms underpinning endometrial function in the peri-implantation period.Clinical Relevance- This allows for an in vitro culture model that mimics the biology of the endometrium, enabling high-throughput testing of mechanisms to deepen our understanding of reproductive biology.

哺乳动物的着床期是决定胚胎着床成功与否和子代健康与否的关键时期。在此期间,母体(子宫内膜)和胚胎之间发生了重要的分子和生物物理相互作用。然而,导致妊娠成功、流产或对后代健康影响的潜在生物学机制仍不清楚。器官芯片技术促进了体外生理细胞和组织环境的3D模型,准确地复制了体内观察到的细胞和组织在适当流动条件下的行为。本研究提出了一种微流控装置,旨在创建一个芯片上的子宫内膜,以研究在植入期成功怀孕的机制。我们评估了通道的适当流速条件,装置是否适合细胞培养,以及在装置中维持不同子宫内膜细胞类型的合适培养基。一个概括子宫内膜组织复杂性的体内培养模型将支持有效的研究,并增强我们对围着床期子宫内膜功能机制的理解。临床相关性-这允许模拟子宫内膜生物学的体外培养模型,使高通量机制测试能够加深我们对生殖生物学的理解。
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引用次数: 0
Deep Learning-Based Cardiac Output Estimation Using Multimodal Physiological Signals. 基于深度学习的多模态生理信号心输出量估计。
Jaganathan G, Aravind A Anil, P M Nabeel, Jayaraj Joseph

Cardiac output (CO) is one of the most significant physiological parameters for cardiovascular monitoring. The gold standard for CO estimation, thermodilution, requires invasive catheterization, limiting its frequent use. Non-invasive methods exist but often lack accuracy. In this study, we applied deep learning to estimate CO based on different input signals including arterial pressure (ART), electrocardiography (ECG), photoplethysmography (PPG), and their combinations. Using publicly available VitalDB database, models were trained and evaluated according to different signals. Performance was measured using mean absolute error (MAE), root mean square error (RMSE), bias, and limits of agreement (LOA). Of all combinations tested, the triadic model of ART, ECG, and PPG yielded the best performance in MAE (0.66 L/min) and stronger correlation (R = 0.84) with reference CO values. The present study indicates the promise of deep learning for accurate noninvasive estimation of CO. Future research should emphasize the interpretability of the model, scaling up datasets, and facilitating real time applications for increased clinical utility.

心输出量(Cardiac output, CO)是心血管监测最重要的生理参数之一。估计CO的金标准,热稀释,需要侵入性导管,限制了它的频繁使用。非侵入性方法已经存在,但往往缺乏准确性。在这项研究中,我们应用深度学习来估计CO基于不同的输入信号,包括动脉压(ART),心电图(ECG),光容积脉搏波(PPG),以及它们的组合。使用公开可用的VitalDB数据库,根据不同的信号对模型进行训练和评估。使用平均绝对误差(MAE)、均方根误差(RMSE)、偏倚和一致限(LOA)来衡量性能。在所有测试的组合中,ART、ECG和PPG的三元模型在MAE中的表现最好(0.66 L/min),与参考CO值的相关性更强(R = 0.84)。目前的研究表明,深度学习有望对CO进行准确的无创评估。未来的研究应强调模型的可解释性,扩大数据集,促进实时应用,以提高临床实用性。
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引用次数: 0
Development of a Bipolar Nozzle for Disinfection in Periodontology with Plasma Jets. 等离子射流牙周病消毒用双极喷嘴的研制。
Ana Carolina Goncalves Seabra, Elena Haydl, Markus Jorg Altenburger, Michael Bergmann, Loic Ledernez, Thomas Stieglitz

Periodontitis is an inflammatory disease of the root surface caused by bacterial biofilms, leading to tooth loss and systemic health complications. Current treatment options rely on mechanical biofilm removal and chemical antimicrobial cleansing, which can be ineffective and contribute to tissue damage and bacterial resistance. Cold atmospheric plasma jet is a promising alternative due to its antimicrobial effects, lack of resistance development, and without known side effects. This study investigates the development and efficacy of a bipolar plasma nozzle designed for use on non-conductive surfaces, such as natural teeth. A proof-of-concept experiment was performed using a prototype plasma system (helium + 1 % oxygen used as working gas), with in vitro tests on bacterial agar plates of E. coli and S. aureus. The results demonstrate that plasma treatment effectively reduces bacterial concentration, with inhibition zones increasing with treatment duration, reaching two orders of magnitude reduction at 10 minutes of treatment. These findings support the potential of plasma technology as a novel method for periodontal disinfection, making way for further clinical applications.Clinical Relevance- This work provides proof-of-concept for the disinfection and treatment of inflamed surfaces in periodontology using a novel cold atmospheric plasma jet device.

牙周炎是由细菌生物膜引起的牙根表面炎症性疾病,可导致牙齿脱落和全身健康并发症。目前的治疗方案依赖于机械生物膜去除和化学抗菌清洗,这可能无效,并导致组织损伤和细菌耐药性。低温大气等离子体射流具有抗菌作用、耐药少、无已知副作用等优点,是一种很有前途的替代方法。本研究探讨了设计用于非导电表面(如天然牙齿)的双极等离子体喷嘴的开发和效果。使用原型等离子体系统(氦气+ 1%氧气作为工作气体)进行概念验证实验,并在大肠杆菌和金黄色葡萄球菌的细菌琼脂板上进行体外测试。结果表明,血浆处理可有效降低细菌浓度,抑制区随着处理时间的延长而增加,在处理10分钟时达到两个数量级的降低。这些发现支持了等离子体技术作为牙周消毒新方法的潜力,为进一步的临床应用铺平了道路。临床意义-这项工作为使用新型冷大气等离子体喷射装置消毒和治疗牙周病炎症表面提供了概念证明。
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引用次数: 0
Fine-Tuning Foundation Models with Federated Learning for Privacy Preserving Medical Time Series Forecasting. 基于联邦学习的隐私保护医学时间序列预测微调基础模型。
Mahad Ali, Curtis Lisle, Patrick W Moore, Tammer Barkouki, Brian J Kirkwood, Laura J Brattain

Federated Learning (FL) provides a decentralized machine learning approach, where multiple devices or servers collaboratively train a model without sharing their raw data, thus enabling data privacy. This approach has gained significant interest in academia and industry due to its privacy-preserving properties, which are particularly valuable in the medical domain where data availability is often protected under strict regulations. A relatively unexplored area is applying FL to fine-tune Foundation Models (FMs) for time series forecasting, enhancing efficacy while preserving privacy. In this paper, we fine-tuned time series FMs with Electrocardiogram (ECG) and Impedance Cardiography (ICG) data using different FL techniques. We then examined various scenarios and discussed the challenges FL faces under different data heterogeneity configurations. Our empirical results demonstrated that while FL can be effective for fine-tuning FMs on time series forecasting tasks, its benefits depend on the data distribution across clients. We highlighted the trade-offs in applying FL to FM fine-tuning.

联邦学习(FL)提供了一种分散的机器学习方法,其中多个设备或服务器协作训练模型,而不共享其原始数据,从而实现数据隐私。由于其隐私保护特性,这种方法在学术界和工业界引起了极大的兴趣,这在数据可用性通常受到严格法规保护的医疗领域尤其有价值。一个相对未开发的领域是将FL应用于微调基础模型(FMs)以进行时间序列预测,在保护隐私的同时提高效率。在本文中,我们使用不同的FL技术对心电图(ECG)和阻抗心电图(ICG)数据的时间序列FMs进行微调。然后,我们研究了各种场景,并讨论了FL在不同数据异构配置下面临的挑战。我们的实证结果表明,虽然FL可以有效地对时间序列预测任务的fm进行微调,但其收益取决于客户端的数据分布。我们强调了将FL应用于FM微调的权衡。
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引用次数: 0
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Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference
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