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Functionalized Silicon Electrodes in Electrochemistry. 电化学中的功能化硅电极。
Pub Date : 2020-06-12 Epub Date: 2020-04-14 DOI: 10.1146/annurev-anchem-091619-092506
Vinicius R Gonçales, Jiaxin Lian, Shreedhar Gautam, Richard D Tilley, J Justin Gooding

Avoiding the growth of SiOx has been an enduring task for the use of silicon as an electrode material in dynamic electrochemistry. This is because electrochemical assays become unstable when the SiOx levels change during measurements. Moreover, the silicon electrode can be completely passivated for electron transfer if a thick layer of insulating SiOx grows on the surface. As such, the field of silicon electrochemistry was mainly developed by electron-transfer studies in nonaqueous electrolytes and by applications employing SiOx-passivated silicon-electrodes where no DC currents are required to cross the electrode/electrolyte interface. A solution to this challenge began by functionalizing Si-H electrodes with monolayers based on Si-O-Si linkages. These monolayers have proven very efficient to avoid SiOx formation but are not stable for a long-term operation in aqueous electrolytes due to hydrolysis. It was only with the development of self-assembled monolayers based on Si-C linkages that a reliable protection against SiOx formation was achieved, particularly with monolayers based on α,ω-dialkynes. This review discusses in detail how this surface chemistry achieves such protection, the electron-transfer behavior of these monolayer-modified silicon surfaces, and the new opportunities for electrochemical applications in aqueous solution.

避免SiOx的生长一直是在动态电化学中使用硅作为电极材料的一个持久的任务。这是因为在测量过程中,当SiOx水平发生变化时,电化学分析就会变得不稳定。此外,如果在硅电极表面生长一层厚的绝缘SiOx,则硅电极可以完全钝化以进行电子转移。因此,硅电化学领域主要是通过非水电解质中的电子转移研究和采用siox钝化硅电极的应用而发展起来的,其中不需要直流电流通过电极/电解质界面。解决这一挑战的方法是通过基于Si-O-Si键的单层功能化Si-H电极。这些单层膜已被证明非常有效地避免了SiOx的形成,但由于水解,在水性电解质中长期运行不稳定。只有随着基于Si-C键的自组装单层的发展,才能实现可靠的防止SiOx形成的保护,特别是基于α,ω-二炔的单层。本文详细讨论了这种表面化学是如何实现这种保护的,这些单层修饰硅表面的电子转移行为,以及在水溶液中电化学应用的新机会。
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引用次数: 18
Clinically Relevant Tissue Scale Responses as New Readouts from Organs-on-a-Chip for Precision Medicine. 临床相关的组织尺度反应作为精准医学器官芯片的新读数。
Pub Date : 2020-06-12 Epub Date: 2020-01-21 DOI: 10.1146/annurev-anchem-061318-114919
Olivier T Guenat, Thomas Geiser, François Berthiaume

Organs-on-chips (OOC) are widely seen as being the next generation in vitro models able to accurately recreate the biochemical-physical cues of the cellular microenvironment found in vivo. In addition, they make it possible to examine tissue-scale functional properties of multicellular systems dynamically and in a highly controlled manner. Here we summarize some of the most remarkable examples of OOC technology's ability to extract clinically relevant tissue-level information. The review is organized around the types of OOC outputs that can be measured from the cultured tissues and transferred to clinically meaningful information. First, the creation of functional tissues-on-chip is discussed, followed by the presentation of tissue-level readouts specific to OOC, such as morphological changes, vessel formation and function, tissue properties, and metabolic functions. In each case, the clinical relevance of the extracted information is highlighted.

器官芯片(OOC)被广泛认为是下一代体外模型,能够准确地重现体内细胞微环境的生化物理线索。此外,它们使以高度控制的方式动态地检查多细胞系统的组织尺度功能特性成为可能。在这里,我们总结了一些最显著的例子,说明OOC技术能够提取临床相关的组织水平信息。综述围绕可从培养组织中测量并转移到临床有意义的信息的OOC输出类型进行组织。首先,讨论了功能性芯片组织的创建,然后介绍了OOC特有的组织水平读数,如形态学变化、血管形成和功能、组织特性和代谢功能。在每种情况下,提取的信息的临床相关性是突出的。
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引用次数: 8
Advances in Paper-Based Analytical Devices. 基于纸张的分析设备的进展。
Pub Date : 2020-06-12 Epub Date: 2020-01-27 DOI: 10.1146/annurev-anchem-061318-114845
Tugba Ozer, Catherine McMahon, Charles S Henry
Microfluidic paper-based analytical devices (μPADs) are the newest generation of lab-on-a-chip devices and have made significant strides in both our understanding of fundamental behavior and performance characteristics and expanding their applications. μPADs have become useful analytical techniques for environmental analysis in addition to their more common application as medical point-of-care devices. Although the most common method for device fabrication is wax printing, numerous other techniques exist and have helped address factors ranging from solvent compatibility to improved device function. This review highlights recent reports of fabrication and design, modes of detection, and broad applications of μPADs. Such advances have enabled μPADs to be used in field and laboratory studies to address critical needs in fast, cheaper measurement technologies. Expected final online publication date for the Annual Review of Analytical Chemistry, Volume 13 is June 12, 2020. Please see http://www.annualreviews.org/page/journal/pubdates for revised estimates.
微流控纸基分析设备(μPADs)是最新一代的芯片实验室设备,在我们对基本行为和性能特征的理解以及应用扩展方面取得了重大进展。μ pad除了作为医疗护理点设备的更常见应用外,还成为环境分析的有用分析技术。虽然设备制造最常见的方法是蜡印刷,但存在许多其他技术,并有助于解决从溶剂相容性到改进设备功能的各种因素。本文综述了μ pad的制备和设计、检测模式和广泛应用的最新报道。这些进步使μPADs能够用于现场和实验室研究,以满足快速、廉价测量技术的关键需求。
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引用次数: 162
Microfluidic Immunoassays for Time-Resolved Measurement of Protein Secretion from Single Cells. 微流控免疫分析法用于单细胞蛋白质分泌的时间分辨测量。
Pub Date : 2020-06-12 Epub Date: 2020-02-07 DOI: 10.1146/annurev-anchem-091619-101212
Mai Yamagishi, Osamu Ohara, Yoshitaka Shirasaki

Measurement of humoral factors secreted from cells has served as an indispensable method to monitor the states of a cell ensemble because humoral factors play crucial roles in cell-cell interaction and aptly reflect the states of individual cells. Although a cell ensemble consisting of a large number of cells has conventionally been the object of such measurements, recent advances in microfluidic technology together with highly sensitive immunoassays have enabled us to quantify secreted humoral factors even from individual cells in either a population or a temporal context. Many groups have reported various miniaturized platforms for immunoassays of proteins secreted from single cells. This review focuses on the current status of time-resolved assay platforms for protein secretion with single-cell resolution. We also discuss future perspectives of time-resolved immunoassays from the viewpoint of systems biology.

由于体液因子在细胞-细胞相互作用中起着至关重要的作用,并能恰当地反映单个细胞的状态,因此测量细胞分泌的体液因子已成为监测细胞整体状态不可或缺的方法。虽然由大量细胞组成的细胞集合通常是此类测量的对象,但微流控技术的最新进展以及高灵敏度免疫测定使我们能够量化分泌的体液因子,甚至来自群体或时间背景下的单个细胞。许多研究小组已经报道了用于对单细胞分泌的蛋白质进行免疫分析的各种小型化平台。本文综述了单细胞分辨率蛋白质分泌的时间分辨分析平台的现状。我们还从系统生物学的角度讨论了时间分辨免疫测定的未来前景。
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引用次数: 8
Proteomics of Select Neglected Tropical Diseases. 被忽视热带病的蛋白质组学研究
Pub Date : 2020-06-12 Epub Date: 2020-02-28 DOI: 10.1146/annurev-anchem-091619-093003
Anthony J Saviola, Fernanda Negrão, John R Yates

Technological advances in mass spectrometry have enabled the extensive identification, characterization, and quantification of proteins in any biological system. In disease processes proteins are often altered in response to external stimuli; therefore, proteomics, the large-scale study of proteins and their functions, represents an invaluable tool for understanding the molecular basis of disease. This review highlights the use of mass spectrometry-based proteomics to study the pathogenesis, etiology, and pathology of several neglected tropical diseases (NTDs), a diverse group of disabling diseases primarily associated with poverty in tropical and subtropical regions of the world. While numerous NTDs have been the subject of proteomic studies, this review focuses on Buruli ulcer, dengue, leishmaniasis, and snakebite envenoming. The proteomic studies highlighted provide substantial information on the pathogenic mechanisms driving these diseases; they also identify molecular targets for drug discovery and development and uncover promising biomarkers that can assist in early diagnosis.

质谱技术的进步使任何生物系统中蛋白质的广泛鉴定、表征和定量成为可能。在疾病过程中,蛋白质常常因外界刺激而改变;因此,蛋白质组学,对蛋白质及其功能的大规模研究,是了解疾病分子基础的宝贵工具。这篇综述强调了使用基于质谱的蛋白质组学来研究几种被忽视的热带病(NTDs)的发病机制、病因学和病理,NTDs是一组主要与世界热带和亚热带地区的贫困相关的致残疾病。虽然许多被忽视的热带病已经成为蛋白质组学研究的主题,但本综述的重点是布鲁里溃疡、登革热、利什曼病和蛇咬伤。重点强调的蛋白质组学研究提供了驱动这些疾病的致病机制的大量信息;他们还确定了药物发现和开发的分子靶标,并发现了有助于早期诊断的有前途的生物标志物。
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引用次数: 7
3D Printed Microfluidics. 3D 打印微流体。
Pub Date : 2020-06-12 Epub Date: 2019-12-10 DOI: 10.1146/annurev-anchem-091619-102649
Anna V Nielsen, Michael J Beauchamp, Gregory P Nordin, Adam T Woolley

Traditional microfabrication techniques suffer from several disadvantages, including the inability to create truly three-dimensional (3D) architectures, expensive and time-consuming processes when changing device designs, and difficulty in transitioning from prototyping fabrication to bulk manufacturing. 3D printing is an emerging technique that could overcome these disadvantages. While most 3D printed fluidic devices and features to date have been on the millifluidic size scale, some truly microfluidic devices have been shown. Currently, stereolithography is the most promising approach for routine creation of microfluidic structures, but several approaches under development also have potential. Microfluidic 3D printing is still in an early stage, similar to where polydimethylsiloxane was two decades ago. With additional work to advance printer hardware and software control, expand and improve resin and printing material selections, and realize additional applications for 3D printed devices, we foresee 3D printing becoming the dominant microfluidic fabrication method.

传统的微加工技术有几个缺点,包括无法创建真正的三维(3D)架构,改变设备设计时过程昂贵且耗时,以及难以从原型制造过渡到批量制造。三维打印是一种新兴技术,可以克服这些缺点。迄今为止,大多数三维打印流体设备和功能都是毫流体级的,但也出现了一些真正的微流体设备。目前,立体光刻技术是常规创建微流体结构的最有前途的方法,但正在开发的几种方法也很有潜力。微流体三维打印仍处于早期阶段,类似于二十年前的聚二甲基硅氧烷。随着打印机硬件和软件控制的进一步发展,树脂和打印材料选择的扩大和改进,以及三维打印设备更多应用的实现,我们预计三维打印将成为主流的微流体制造方法。
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引用次数: 0
NanoSIMS Imaging and Analysis in Materials Science. 纳米模拟成像与材料科学分析。
Pub Date : 2020-06-12 Epub Date: 2020-02-04 DOI: 10.1146/annurev-anchem-092019-032524
Kexue Li, Junliang Liu, Chris R M Grovenor, Katie L Moore

High-resolution SIMS analysis can be used to explore a wide range of problems in material science and engineering materials, especially when chemical imaging with good spatial resolution (50-100 nm) can be combined with efficient detection of light elements and precise separation of isotopes and isobaric species. Here, applications of the NanoSIMS instrument in the analysis of inorganic materials are reviewed, focusing on areas of current interest in the development of new materials and degradation mechanisms under service conditions. We have chosen examples illustrating NanoSIMS analysis of grain boundary segregation, chemical processes in cracking, and corrosion of nuclear components. An area where NanoSIMS analysis shows potential is in the localization of light elements, in particular, hydrogen and deuterium. Hydrogen embrittlement is a serious problem for industries where safety is critical, including aerospace, nuclear, and oil/gas, so it is imperative to know where in the microstructure hydrogen is located. By charging the metal with deuterium, to avoid uncertainty in the origin of the hydrogen, the microstructural features that can trap hydrogenic species, such as precipitates and grain and phase boundaries, can be determined by NanoSIMS analysis on a microstructurally relevant scale.

高分辨率SIMS分析可以用于探索材料科学和工程材料中的广泛问题,特别是当具有良好空间分辨率(50-100 nm)的化学成像可以与轻元素的有效检测和同位素和等压物质的精确分离相结合时。本文综述了纳米sims仪器在无机材料分析中的应用,重点介绍了新材料的开发和使用条件下的降解机制。我们选择了一些例子来说明NanoSIMS对晶界偏析、开裂中的化学过程和核部件腐蚀的分析。NanoSIMS分析显示潜力的一个领域是轻元素的定位,特别是氢和氘。对于航空航天、核能和石油/天然气等对安全至关重要的行业来说,氢脆是一个严重的问题,因此必须知道氢在微观结构中的位置。通过向金属充入氘,避免氢的来源不确定,可以通过NanoSIMS分析在微观结构相关尺度上确定可以捕获氢物质的微观结构特征,如沉淀、晶粒和相界。
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引用次数: 17
Petroleomics: Tools, Challenges, and Developments. 石油经济学:工具、挑战和发展
Pub Date : 2020-06-12 Epub Date: 2020-03-20 DOI: 10.1146/annurev-anchem-091619-091824
Diana Catalina Palacio Lozano, Mary J Thomas, Hugh E Jones, Mark P Barrow

The detailed molecular characterization of petroleum-related samples by mass spectrometry, often referred to as petroleomics, continues to present significant analytical challenges. As a result, petroleomics continues to be a driving force for the development of new ultrahigh resolution instrumentation, experimental methods, and data analysis procedures. Recent advances in ionization, resolving power, mass accuracy, and the use of separation methods, have allowed for record levels of compositional detail to be obtained for petroleum-related samples. To address the growing size and complexity of the data generated, vital software tools for data processing, analysis, and visualization continue to be developed. The insights gained impact upon the fields of energy and environmental science and the petrochemical industry, among others. In addition to advancing the understanding of one of nature's most complex mixtures, advances in petroleomics methodologies are being adapted for the study of other sample types, resulting in direct benefits to other fields.

通过质谱法(通常称为石油组学)对石油相关样品进行详细的分子表征,仍然面临着重大的分析挑战。因此,石油组学继续成为开发新型超高分辨率仪器、实验方法和数据分析程序的推动力。最近在电离、分辨能力、质量精度和分离方法的使用方面取得的进展,使与石油有关的样品的成分细节达到了创纪录的水平。为了应对日益增长的数据规模和复杂性,用于数据处理、分析和可视化的重要软件工具不断被开发出来。这些见解对能源和环境科学以及石化工业等领域产生了影响。除了提高对自然界最复杂混合物的理解外,石油学方法的进步也被应用于其他样品类型的研究,从而直接造福于其他领域。
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引用次数: 48
Lipid Diversity in Cells and Tissue Using Imaging SIMS. 细胞和组织脂质多样性成像SIMS。
Pub Date : 2020-06-12 Epub Date: 2020-03-25 DOI: 10.1146/annurev-anchem-091619-103512
Sanna Sämfors, John S Fletcher

Lipids are an important class of biomolecules with many roles within cells and tissue. As targets for study, they present several challenges. They are difficult to label, as many labels lack the specificity to the many different lipid species or the labels maybe larger than the lipids themselves, thus severely perturbing the natural chemical environment. Mass spectrometry provides exceptional specificity and is often used to examine lipid extracts from different samples. However, spatial information is lost during extraction. Of the different imaging mass spectrometry methods available, secondary ion mass spectrometry (SIMS) is unique in its ability to analyze very small features, with probe sizes <50 nm available. It also offers high surface sensitivity and 3D imaging capability on a subcellular scale. This article reviews the current capabilities and some remaining challenges associated with imaging the diverse lipids present in cell and tissue samples. We show how the technique has moved beyond show-and-tell, proof-of-principle analysis and is now being used to address real biological challenges. These include imaging the microenvironment of cancer tumors, probing the pathophysiology of traumatic brain injury, or tracking the lipid composition through bacterial membranes.

脂质是一类重要的生物分子,在细胞和组织中起着许多作用。作为研究对象,它们提出了几个挑战。它们很难被标记,因为许多标签对许多不同的脂类缺乏特异性,或者标签可能比脂类本身大,从而严重扰乱了自然化学环境。质谱法提供了特殊的特异性,经常用于检查来自不同样品的脂质提取物。然而,在提取过程中空间信息丢失。在不同的成像质谱法中,二次离子质谱法(SIMS)在分析探针尺寸非常小的特征方面具有独特的能力
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引用次数: 23
Single Crystal Electrochemistry as an In Situ Analytical Characterization Tool. 单晶电化学作为原位分析表征工具。
Pub Date : 2020-06-12 Epub Date: 2020-04-03 DOI: 10.1146/annurev-anchem-061318-115541
Víctor Climent, Juan Feliu

The electrochemical behavior of platinum single crystal surfaces can be taken as a model response for the interpretation of the activity of heterogeneous electrodes. The cyclic voltammogram of a given platinum electrode can be considered a fingerprint characteristic of the distribution of sites on its surface. We start this review by providing some simple mathematical descriptions of the voltammetric response in the presence of adsorption processes. We then describe the voltammogram of platinum basal planes, followed by the response of stepped surfaces. The voltammogram of polycrystalline materials can be understood as a composition of the response of the different basal contributions. Further resolution in the discrimination of different surface sites can be achieved with the aid of surface modification using adatoms such as bismuth or germanium. The application of these ideas is exemplified with the consideration of real catalysts composed of platinum nanoparticles with preferential shapes.

铂单晶表面的电化学行为可以作为解释非均相电极活性的模型响应。给定铂电极的循环伏安图可以被认为是其表面上位点分布的指纹特征。我们首先提供一些简单的数学描述伏安响应在吸附过程的存在。然后我们描述了铂基面的伏安图,然后描述了阶梯表面的响应。多晶材料的伏安谱可以理解为不同基底贡献的响应的组成。进一步分辨不同的表面位置可以借助于表面修饰,如铋或锗。以具有优先形状的铂纳米颗粒组成的实际催化剂为例,说明了这些思想的应用。
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引用次数: 11
期刊
Annual review of analytical chemistry (Palo Alto, Calif.)
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