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eNpHR: a Natronomonas halorhodopsin enhanced for optogenetic applications. eNpHR:一种用于光遗传学应用的碱单胞菌紫红质。
Pub Date : 2008-08-01 Epub Date: 2008-08-02 DOI: 10.1007/s11068-008-9027-6
Viviana Gradinaru, Kimberly R Thompson, Karl Deisseroth

Temporally precise inhibition of distinct cell types in the intact nervous system has been enabled by the microbial halorhodopsin NpHR, a fast light-activated electrogenic Cl(-) pump. While neurons can be optically hyperpolarized and inhibited from firing action potentials at moderate NpHR expression levels, we have encountered challenges with pushing expression to extremely high levels, including apparent intracellular accumulations. We therefore sought to molecularly engineer NpHR to achieve strong expression without these cellular side effects. We found that high expression correlated with endoplasmic reticulum (ER) accumulation, and that under these conditions NpHR colocalized with ER proteins containing the KDEL ER retention sequence. We screened a number of different putative modulators of membrane trafficking and identified a combination of two motifs, an N-terminal signal peptide and a C-terminal ER export sequence, that markedly promoted membrane localization and ER export defined by confocal microscopy and whole-cell patch clamp. The modified NpHR displayed increased peak photocurrent in the absence of aggregations or toxicity, and potent optical inhibition was observed not only in vitro but also in vivo with thalamic single-unit recording. The new enhanced NpHR (eNpHR) allows safe, high-level expression in mammalian neurons, without toxicity and with augmented inhibitory function, in vitro and in vivo.

微生物盐紫红质NpHR是一种快速光激活的电致氯(-)泵,它可以暂时精确抑制完整神经系统中不同类型的细胞。虽然在适度的NpHR表达水平下,神经元可以光超极化并抑制动作电位的激发,但我们遇到了将表达推至极高水平的挑战,包括明显的细胞内积聚。因此,我们试图对NpHR进行分子工程,以实现强表达而不产生这些细胞副作用。我们发现高表达与内质网(ER)积累相关,并且在这些条件下,NpHR与含有KDEL ER保留序列的ER蛋白共定位。我们筛选了许多不同的假定的膜运输调节剂,并鉴定了两个基序的组合,一个n端信号肽和一个c端内质网输出序列,它们显著促进了共聚焦显微镜和全细胞膜片钳定义的膜定位和内质网输出。修饰后的NpHR在没有聚集或毒性的情况下显示出峰值光电流的增加,并且通过丘脑单单元记录在体外和体内观察到强大的光抑制作用。新的增强型NpHR (eNpHR)在体外和体内均可在哺乳动物神经元中安全、高水平表达,无毒且具有增强的抑制功能。
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引用次数: 476
Real-time monitoring of cyclic nucleotide signaling in neurons using genetically encoded FRET probes. 利用基因编码FRET探针实时监测神经元中的环核苷酸信号。
Pub Date : 2008-08-01 Epub Date: 2008-10-22 DOI: 10.1007/s11068-008-9035-6
Pierre Vincent, Nicolas Gervasi, Jin Zhang

Signaling cascades involving cyclic nucleotides play key roles in signal transduction in virtually all cell types. Elucidation of the spatiotemporal regulation of cyclic nucleotide signaling requires methods for tracking the dynamics of cyclic nucleotides and the activities of their regulators and effectors in the native biological context. Here we review a series of genetically encoded FRET-based probes for real-time monitoring of cyclic nucleotide signaling with a particular focus on their implementation in neurons. Current data indicate that neurons have a very active metabolism in cyclic nucleotide signaling, which is tightly regulated through a variety of homeostatic regulations.

涉及环核苷酸的信号级联在几乎所有细胞类型的信号转导中起关键作用。阐明环核苷酸信号的时空调节需要在原生生物环境中跟踪环核苷酸的动力学及其调节物和效应物的活动的方法。在这里,我们回顾了一系列基因编码的基于fret的探针,用于实时监测环核苷酸信号,特别关注它们在神经元中的实现。目前的数据表明,神经元在环核苷酸信号中具有非常活跃的代谢,并通过多种稳态调节受到严格调节。
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引用次数: 20
Highly sensitive and quantitative FRET-FLIM imaging in single dendritic spines using improved non-radiative YFP. 使用改进的非辐射YFP对单个树突棘进行高灵敏度和定量的FRET-FLIM成像。
Pub Date : 2008-08-01 Epub Date: 2008-05-30 DOI: 10.1007/s11068-008-9024-9
Hideji Murakoshi, Seok-Jin Lee, Ryohei Yasuda

Two-photon fluorescence lifetime imaging microscopy (TPFLIM) enables the quantitative measurements of fluorescence resonance energy transfer (FRET) in small subcellular compartments in light scattering tissue. We evaluated and optimized the FRET pair of mEGFP (monomeric EGFP with the A206K mutation) and REACh (non-radiative YFP variants) for TPFLIM. We characterized several mutants of REACh in terms of their "darkness," and their ability to act as a FRET acceptor for mEGFP in HeLa cells and hippocampal neurons. Since the commonly used monomeric mutation A206K increases the brightness of REACh, we introduced a different monomeric mutation (F223R) which does not affect the brightness. Also, we found that the folding efficiency of original REACh, as measured by the fluorescence lifetime of a mEGFP-REACh tandem dimer, was low and variable from cell to cell. Introducing two folding mutations (F46L, Q69M) into REACh increased the folding efficiency by approximately 50%, and reduced the variability of FRET signal. Pairing mEGFP with the new REACh (super-REACh, or sREACh) improved the signal-to-noise ratio compared to the mEGFP-mRFP or mEGFP-original REACh pair by approximately 50%. Using this new pair, we demonstrated that the fraction of actin monomers in filamentous and globular forms in single dendritic spines can be quantitatively measured with high sensitivity. Thus, the mEGFP-sREACh pair is suited for quantitative FRET measurement by TPFLIM, and enables us to measure protein-protein interactions in individual dendritic spines in brain slices with high sensitivity.

双光子荧光寿命成像显微镜(TPFLIM)能够定量测量荧光共振能量转移(FRET)在小亚细胞区室的光散射组织。我们评估并优化了mEGFP (A206K突变的单体EGFP)和REACh(非辐射型YFP变体)对TPFLIM的FRET配对。我们根据REACh的“黑暗”和它们在海拉细胞和海马神经元中作为mEGFP的FRET受体的能力来表征它们的几个突变体。由于常用的单体突变A206K增加了REACh的亮度,我们引入了不影响亮度的不同单体突变(F223R)。此外,我们发现,通过mEGFP-REACh串联二聚体的荧光寿命测量,原始REACh的折叠效率很低,并且在细胞之间变化。在REACh中引入两个折叠突变(F46L, Q69M),折叠效率提高了约50%,并降低了FRET信号的变异性。与mEGFP- mrfp或mEGFP-原始REACh对相比,将mEGFP与新的REACh (super-REACh,或sREACh)配对可将信噪比提高约50%。利用这一新对,我们证明了肌动蛋白单体在单个树突棘中呈丝状和球状形式的比例可以以高灵敏度定量测量。因此,mEGFP-sREACh对适用于TPFLIM定量FRET测量,并使我们能够以高灵敏度测量脑切片中单个树突棘中的蛋白质-蛋白质相互作用。
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引用次数: 140
A heterogeneous "resting" pool of synaptic vesicles that is dynamically interchanged across boutons in mammalian CNS synapses. 在哺乳动物中枢神经系统突触中,一种异质的突触囊泡“静息”池在钮扣间动态交换。
Pub Date : 2008-08-01 Epub Date: 2008-10-22 DOI: 10.1007/s11068-008-9030-y
Tomas Fernandez-Alfonso, Timothy A Ryan

Using pHluorin-tagged synaptic vesicle proteins we have examined the partitioning of these probes into recycling and nonrecycling pools at hippocampal nerve terminals in cell culture. Our studies show that for three of the major synaptic vesicle components, vGlut-1, VAMP-2, and Synaptotagmin I, approximately 50-60% of the tagged protein appears in a recycling pool that responds readily to sustained action potential stimulation by mobilizing and fusing with the plasma membrane, while the remainder is targeted to a nonrecycling, acidic compartment. The fraction of recycling and nonrecycling (or resting) pools varied significantly across boutons within an individual axon, from 100% resting (silent) to 100% recycling. Single-bouton bleaching studies show that recycling and resting pools are dynamic and exchange between synaptic boutons. The quantitative parameters that can be extracted with the approaches outlined here should help elucidate the potential functional role of the resting vesicle pool.

使用氟标记的突触囊泡蛋白,我们在细胞培养中检查了这些探针在海马神经末梢的循环池和非循环池中的分配。我们的研究表明,对于三种主要的突触囊泡成分,vGlut-1、VAMP-2和Synaptotagmin I,大约50-60%的标记蛋白出现在一个循环池中,通过动员并与质膜融合,该循环池易于响应持续的动作电位刺激,而其余的则针对非循环的酸性隔室。在单个轴突的各个钮扣中,循环和非循环(或静止)池的比例差异显著,从100%静止(静止)到100%循环。单钮扣漂白研究表明,突触钮扣之间的循环和静息池是动态交换的。可以用这里概述的方法提取的定量参数应该有助于阐明静息囊泡池的潜在功能作用。
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引用次数: 91
Reporting neural activity with genetically encoded calcium indicators. 用基因编码的钙指标报告神经活动。
Pub Date : 2008-08-01 DOI: 10.1007/s11068-008-9029-4
S Andrew Hires, Lin Tian, Loren L Looger

Genetically encoded calcium indicators (GECIs), based on recombinant fluorescent proteins, have been engineered to observe calcium transients in living cells and organisms. Through observation of calcium, these indicators also report neural activity. We review progress in GECI construction and application, particularly toward in vivo monitoring of sparse action potentials (APs). We summarize the extrinsic and intrinsic factors that influence GECI performance. A simple model of GECI response to AP firing demonstrates the relative significance of these factors. We recommend a standardized protocol for evaluating GECIs in a physiologically relevant context. A potential method of simultaneous optical control and recording of neuronal circuits is presented.

基于重组荧光蛋白的基因编码钙指示剂(GECIs)已被设计用于观察活细胞和生物体中的钙瞬态。通过观察钙,这些指标也报告神经活动。本文综述了GECI的构建和应用的进展,特别是在稀疏动作电位(APs)的体内监测方面。我们总结了影响GECI绩效的外在因素和内在因素。一个简单的GECI对AP放电的反应模型证明了这些因素的相对重要性。我们推荐一个标准化的方案来评估geci在生理相关的背景下。提出了一种同时进行光控制和神经回路记录的潜在方法。
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引用次数: 138
Optimizing the spatial resolution of Channelrhodopsin-2 activation. 通道视紫红质-2活化的空间分辨率优化。
Pub Date : 2008-08-01 Epub Date: 2008-07-25 DOI: 10.1007/s11068-008-9025-8
Philipp Schoenenberger, Asa Grunditz, Tobias Rose, Thomas G Oertner

Over the past few years, the light-gated cation channel Channelrhodopsin-2 (ChR2) has seen a remarkable diversity of applications in neuroscience. However, commonly used wide-field illumination provides poor spatial selectivity for cell stimulation. We explored the potential of focal laser illumination to map photocurrents of individual neurons in sparsely transfected hippocampal slice cultures. Interestingly, the best spatial resolution of photocurrent induction was obtained at the lowest laser power. By adjusting the light intensity to a neuron's spike threshold, we were able to trigger action potentials with a spatial selectivity of less than 30 microm. Experiments with dissociated hippocampal cells suggested that the main factor limiting the spatial resolution was ChR2 current density rather than scattering of the excitation light. We conclude that subcellular resolution can be achieved only in cells with a high ChR2 expression level and that future improved variants of ChR2 are likely to extend the spatial resolution of photocurrent induction to the level of single dendrites.

在过去的几年中,光门控阳离子通道视紫红质-2 (ChR2)在神经科学中得到了广泛的应用。然而,常用的宽视场照明对细胞刺激的空间选择性较差。我们探索了聚焦激光照明在稀疏转染的海马切片培养中绘制单个神经元光电流的潜力。有趣的是,在最低的激光功率下,光电流感应的空间分辨率最高。通过将光强度调整到神经元的峰值阈值,我们能够以小于30微米的空间选择性触发动作电位。分离海马细胞实验表明,限制空间分辨率的主要因素是ChR2电流密度,而不是激发光的散射。我们得出结论,只有在高ChR2表达水平的细胞中才能实现亚细胞分辨率,并且未来ChR2的改进变体可能会将光电流感应的空间分辨率扩展到单个树突的水平。
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引用次数: 50
Optogenetic probes. 光遗传学探针。
Pub Date : 2008-08-01 DOI: 10.1007/s11068-008-9037-4
Ryohei Yasuda, George J Augustine
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引用次数: 3
Imaging synaptic inhibition throughout the brain via genetically targeted Clomeleon. 成像突触抑制整个大脑通过基因靶向Clomeleon。
Pub Date : 2008-08-01 Epub Date: 2008-10-11 DOI: 10.1007/s11068-008-9031-x
Ken Berglund, Wolfram Schleich, Hong Wang, Guoping Feng, William C Hall, Thomas Kuner, George J Augustine

Here we survey a molecular genetic approach for imaging synaptic inhibition. This approach is based on measuring intracellular chloride concentration ([Cl(-)](i)) with the fluorescent chloride indicator protein, Clomeleon. We first describe several different ways to express Clomeleon in selected populations of neurons in the mouse brain. These methods include targeted viral gene transfer, conditional expression controlled by Cre recombination, and transgenesis based on the neuron-specific promoter, thy1. Next, we evaluate the feasibility of using different lines of thy1::Clomeleon transgenic mice to image synaptic inhibition in several different brain regions: the hippocampus, the deep cerebellar nuclei (DCN), the basolateral nucleus of the amygdala, and the superior colliculus (SC). Activation of hippocampal interneurons caused [Cl(-)](i) to rise transiently in individual postsynaptic CA1 pyramidal neurons. [Cl(-)](i) increased linearly with the number of electrical stimuli in a train, with peak changes as large as 4 mM. These responses were largely mediated by GABA receptors because they were blocked by antagonists of GABA receptors, such as GABAzine and bicuculline. Similar responses to synaptic activity were observed in DCN neurons, amygdalar principal cells, and collicular premotor neurons. However, in contrast to the hippocampus, the responses in these three regions were largely insensitive to antagonists of inhibitory neurotransmitter receptors. This indicates that synaptic activity can also cause Cl(-) influx through alternate pathways that remain to be identified. We conclude that Clomeleon imaging permits non-invasive, spatiotemporally precise recordings of [Cl(-)](i) in a large variety of neurons, and provides new opportunities for imaging synaptic inhibition and other forms of neuronal chloride signaling.

在这里,我们研究了一种分子遗传学方法来成像突触抑制。这种方法是基于用荧光氯化物指示蛋白Clomeleon测量细胞内氯化物浓度([Cl(-)](i))。我们首先描述了几种不同的方式来表达Clomeleon在小鼠大脑中选定的神经元群体。这些方法包括靶向病毒基因转移,由Cre重组控制的条件表达,以及基于神经元特异性启动子thy1的转基因。接下来,我们评估了使用不同种类的thy1::Clomeleon转基因小鼠在几个不同的大脑区域(海马、小脑深部核(DCN)、杏仁核基底外侧核和上丘(SC))成像突触抑制的可行性。海马中间神经元的激活导致单个突触后CA1锥体神经元中的[Cl(-)](i)瞬间升高。[Cl(-)](i)随着电刺激次数的增加而线性增加,峰值变化可达4 mM。这些反应主要由GABA受体介导,因为它们被GABA受体拮抗剂(如GABAzine和bicuculline)阻断。在DCN神经元、杏仁核主细胞和丘前运动神经元中也观察到类似的突触活性反应。然而,与海马体相反,这三个区域的反应对抑制性神经递质受体拮抗剂不敏感。这表明突触活动也可以通过其他途径引起Cl(-)内流,这些途径仍有待确定。我们得出的结论是,Clomeleon成像允许非侵入性,时空精确记录多种神经元中的[Cl(-)](i),并为成像突触抑制和其他形式的神经元氯信号提供了新的机会。
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引用次数: 59
Brain Cell Meetings 脑细胞会议
Pub Date : 2008-01-01 DOI: 10.1007/s11068-009-9041-3
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引用次数: 0
Welcome to Brain Cell Biology! 欢迎来到脑细胞生物学!
Pub Date : 2007-03-10 DOI: 10.1007/S11068-006-9006-8
G. Augustine
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引用次数: 0
期刊
Brain cell biology
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