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Analyses of Off-Target Effects on Cardiac and Skeletal Muscles by Berberine, a Drug Used to Treat Cancers and Induce Weight Loss. 小檗碱(一种用于治疗癌症和减轻体重的药物)对心脏和骨骼肌的脱靶效应分析
Pub Date : 2024-11-11 DOI: 10.1002/cm.21950
Jushuo Wang, Yingli Fan, Syamalima Dube, Patricia Benz, Dipak Dube, Jean M Sanger, Joseph W Sanger

Previous reports from our laboratory describing the formation of myofibrils in cultured embryonic cardiac and skeletal muscle cells have proposed that myofibrillogenesis occurs in three steps of increasing protein organization: beginning with premyofibrils, followed by nascent myofibrils, and ending in mature myofibrils. Inhibitors of the ubiquitin proteasome system (UPS) prevented nascent myofibrils from progressing directly to mature myofibrils in cultured cardiac and skeletal muscle cells, supporting a three-step model of assembly in which some of the proteins in nascent myofibrils are proteolyzed to allow the assembly of mature myofibrils. Application of UPS inhibitors on cultured muscle cells suggests possible explanations for the off-target cardiac and skeletal muscle adverse effects of UPS drugs, which are used on cancer patients. Berberine, a plant derivative, has been used to treat various cancers, including multiple myelomas. In contrast to the use of UPS drugs, success was reported with Berberine in multiple myeloma patients with no off-target effects on their hearts. We have exposed cultured cardiac and skeletal muscle cells to Berberine, a ligase inhibitor of UHRF1 (ubiquitin-like with PHD and RING finger domains). Berberine inhibited myofibril assembly at the nascent myofibril stage in embryonic skeletal muscle cells but had no effect in the assembly of mature myofibrils in embryonic heart cells. RT-PCR experiments demonstrated Berberine inhibition of mRNA for muscle myosin II heavy chains but not for muscle actin mRNA in skeletal muscle cells. Berberine is also being used as a popular weight losing compound, because it is much cheaper and available without a prescription than the semaglutide containing weight losing drugs (Wegovy and Ozempic). In contrast to Berberine, semaglutide had no effects on myofibril assembly in culture assays for both cardiac and skeletal muscle cells. We postulate that analyses of cultured embryonic cardiac and skeletal muscle cells will provide a preclinical assay for the testing of novel cancer drugs with improved outcomes for patients, an important goal for cancer therapeutics.

我们实验室以前的报告描述了在培养的胚胎心肌细胞和骨骼肌细胞中肌原纤维的形成过程,报告提出肌原纤维的形成过程分为三个步骤,蛋白质组织不断增加:首先是前肌原纤维,然后是新生肌原纤维,最后是成熟肌原纤维。泛素蛋白酶体系统(UPS)抑制剂可阻止培养的心肌细胞和骨骼肌细胞中的新生肌原纤维直接发展为成熟肌原纤维,从而支持三步组装模型,即新生肌原纤维中的部分蛋白质被蛋白水解,从而组装成成熟肌原纤维。在培养的肌肉细胞中应用 UPS 抑制剂可以解释用于癌症患者的 UPS 药物对心脏和骨骼肌产生的脱靶不良反应。小檗碱是一种植物衍生物,已被用于治疗多种癌症,包括多发性骨髓瘤。与使用 UPS 药物不同的是,有报告称小檗碱在多发性骨髓瘤患者身上取得了成功,而且对他们的心脏没有产生脱靶效应。小檗碱是 UHRF1(具有 PHD 和 RING 手指结构域的类泛素)的连接酶抑制剂。小檗碱抑制了胚胎骨骼肌细胞新生肌原纤维阶段的肌原纤维组装,但对胚胎心脏细胞成熟肌原纤维的组装没有影响。RT-PCR 实验表明,小檗碱能抑制骨骼肌细胞中肌肉肌球蛋白 II 重链的 mRNA,但不能抑制肌肉肌动蛋白 mRNA。小檗碱还被用作一种流行的减肥复方制剂,因为它比含塞马鲁肽的减肥药(Wegovy 和 Ozempic)便宜得多,而且无需处方即可买到。与小檗碱相反,在心肌细胞和骨骼肌细胞的培养试验中,塞马鲁肽对肌原纤维的组装没有影响。我们推测,对培养的胚胎心肌细胞和骨骼肌细胞进行分析将为新型抗癌药物的临床前试验提供一种方法,从而改善患者的治疗效果,这是癌症治疗的一个重要目标。
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引用次数: 0
Alteration of Cytoskeletal Proteins Leads to Retinal Degeneration in Drosophila. 细胞骨架蛋白的改变导致果蝇视网膜退化
Pub Date : 2024-11-07 DOI: 10.1002/cm.21955
Surajita Sahu, Monalisa Mishra

The eye holds a special fascination for many neuroscientists because of its meticulously organized structure. Vertebrates typically possess a simple camera-type eye, whereas the compound eye structure is predominantly observed in arthropods including model organism Drosophila melanogaster. Cell shape, cell polarization, and tissue integrity are the cell biological processes crucial for shaping the eye, which directly or indirectly depends on the cytoskeleton. Henceforth the cytoskeleton, specifically actin microfilaments, essentially has a dynamic role in the normal development and growth of eye structure. This review provides insight into the roles played by the actin cytoskeleton during the development and maintenance of the Drosophila eye.

眼睛因其精密的组织结构而令许多神经科学家着迷。脊椎动物通常拥有简单的照相机型眼睛,而复眼结构主要见于节肢动物,包括模式生物黑腹果蝇。细胞形状、细胞极化和组织完整性是塑造眼睛的关键细胞生物学过程,而这些过程直接或间接地依赖于细胞骨架。因此,细胞骨架,特别是肌动蛋白微丝,在眼球结构的正常发育和生长中起着重要的作用。本综述将深入探讨肌动蛋白细胞骨架在果蝇眼睛的发育和维持过程中所发挥的作用。
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引用次数: 0
SEC-SAXS/MC Ensemble Structural Studies of the Microtubule Binding Protein Cdt1 Show Monomeric, Folded-Over Conformations. 微管结合蛋白 Cdt1 的 SEC-SAXS/MC 组合结构研究显示了单体折叠构象。
Pub Date : 2024-11-06 DOI: 10.1002/cm.21954
Kyle P Smith, Srinivas Chakravarthy, Amit Rahi, Manas Chakraborty, Kristen M Vosberg, Marco Tonelli, Maximilian G Plach, Arabela A Grigorescu, Joseph E Curtis, Dileep Varma

Cdt1 is a mixed folded protein critical for DNA replication licensing and it also has a "moonlighting" role at the kinetochore via direct binding to microtubules and the Ndc80 complex. However, it is unknown how the structure and conformations of Cdt1 could allow it to participate in these multiple, unique sets of protein complexes. While robust methods exist to study entirely folded or unfolded proteins, structure-function studies of combined, mixed folded/disordered proteins remain challenging. In this work, we employ orthogonal biophysical and computational techniques to provide structural characterization of mitosis-competent human Cdt1. Thermal stability analyses shows that both folded winged helix domains1 are unstable. CD and NMR show that the N-terminal and linker regions are intrinsically disordered. DLS shows that Cdt1 is monomeric and polydisperse, while SEC-MALS confirms that it is monomeric at high concentrations, but without any apparent inter-molecular self-association. SEC-SAXS enabled computational modeling of the protein structures. Using the program SASSIE, we performed rigid body Monte Carlo simulations to generate a conformational ensemble of structures. We observe that neither fully extended nor extremely compact Cdt1 conformations are consistent with SAXS. The best-fit models have the N-terminal and linker disordered regions extended into the solution and the two folded domains close to each other in apparent "folded over" conformations. We hypothesize the best-fit Cdt1 conformations could be consistent with a function as a scaffold protein that may be sterically blocked without binding partners. Our study also provides a template for combining experimental and computational techniques to study mixed-folded proteins.

Cdt1 是一种混合折叠蛋白,对 DNA 复制许可至关重要,它还通过与微管和 Ndc80 复合物的直接结合在动点上扮演 "兼职 "角色。然而,Cdt1 的结构和构象如何使其参与这些多重、独特的蛋白质复合物还不得而知。虽然存在研究完全折叠或未折叠蛋白质的可靠方法,但对组合、混合折叠/有序蛋白质的结构-功能研究仍具有挑战性。在这项研究中,我们采用了正交生物物理和计算技术,对有丝分裂功能的人类 Cdt1 进行了结构鉴定。热稳定性分析表明,两个折叠的翼螺旋结构域1都不稳定。CD 和 NMR 显示,N-末端和连接区是内在无序的。DLS 显示 Cdt1 是单体且多分散的,而 SEC-MALS 则证实它在高浓度下是单体,但没有任何明显的分子间自结合。SEC-SAXS 实现了蛋白质结构的计算建模。我们使用 SASSIE 程序进行了刚体蒙特卡罗模拟,生成了一个构象组合结构。我们观察到,Cdt1 的完全扩展构象和极度紧凑构象都与 SAXS 不一致。最佳拟合模型的 N 端和连接体无序区延伸到溶液中,两个折叠结构域相互靠近,呈明显的 "折叠 "构象。我们推测,Cdt1 的最佳拟合构象可能与它作为支架蛋白的功能相一致,如果没有结合伙伴,它可能会被立体阻断。我们的研究还为结合实验和计算技术研究混合折叠蛋白提供了一个模板。
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引用次数: 0
The Heterotaxy Gene CCDC11 Is Important for Cytokinesis via RhoA Regulation. 异位基因 CCDC11 通过 RhoA 调节对细胞分裂很重要
Pub Date : 2024-10-31 DOI: 10.1002/cm.21952
Saurabh S Kulkarni, Rachel E Stephenson, Sarah Amalraj, Angelo Arrigo, Ewelina Betleja, James J Moresco, John R Yates, Moe R Mahjoub, Ann L Miller, Mustafa K Khokha

Mutations in CCDC11 (cfap53) have been identified in multiple patients with heterotaxy (Htx), a disorder of left-right (LR) patterning of the internal organs. In Xenopus, depletion of Ccdc11 causes defects in LR patterning, recapitulating the patient phenotype. Upon Ccdc11 depletion, monociliated cells of the Left-Right Organizer (LRO) exhibit multiple cilia per cell. Unexpectedly, we found that Ccdc11 is necessary for successful cytokinesis, explaining the multiciliation phenotype observed in Ccdc11-depleted cells. The small GTPase RhoA is critical for cytokinesis, and our Ccdc11 depletion phenotypes are reminiscent of RhoA loss of function. Here, we demonstrate that during cytokinesis CCDC11 is localized to the cytokinetic contractile ring overlapping with RhoA, and CCDC11 regulates total RhoA protein levels. Our results connect CCDC11 to cytokinesis and LR patterning via RhoA regulation, providing a potential mechanism for heterotaxy disease pathogenesis.

CCDC11 (cfap53)突变已在多名异位症(Htx)患者中发现,异位症是一种内脏器官左右(LR)模式化障碍。在爪蟾中,Ccdc11的缺失会导致LR模式化缺陷,重现患者的表型。Ccdc11 缺失后,左-右器官(LRO)的单纤毛细胞表现出每个细胞多个纤毛。意想不到的是,我们发现 Ccdc11 是细胞分裂成功的必要条件,这也解释了在 Ccdc11 缺失的细胞中观察到的多纤毛表型。小 GTPase RhoA 对细胞运动至关重要,我们的 Ccdc11 缺失表型与 RhoA 功能缺失相似。在这里,我们证明了在细胞运动过程中,CCDC11 定位于与 RhoA 重叠的细胞运动收缩环上,并且 CCDC11 可调节 RhoA 蛋白的总水平。我们的研究结果通过 RhoA 的调控将 CCDC11 与细胞分裂和 LR 模式化联系起来,为异位发育疾病的发病机制提供了一种潜在的机制。
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引用次数: 0
Meet Our Associate Editorial Board: An Interview With Camila Goldy, ENS de Lyon, Lyon, France. 认识我们的副编委:专访法国里昂 ENS 的 Camila Goldy。
Pub Date : 2024-10-12 DOI: 10.1002/cm.21943
Paul Trevorrow, Camila Goldy
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引用次数: 0
Myosin VI Is Associated With the Endoplasmic Reticulum in Regions of Sertoli Cells Containing Tubulobulbar Complexes. 肌球蛋白 VI 与内质网相关联,位于含有管胞复合体的 Sertoli 细胞区域。
Pub Date : 2024-10-10 DOI: 10.1002/cm.21949
Samuel Tretjakov, Prunveer Palia, A Wayne Vogl

Myosin VI has been reported by others to localize in association with various regions of apical tubulobulbar complexes (TBCs) at sites of attachment between Sertoli cells and late spermatids in the mouse. Tubulobulbar complexes internalize "intact" intercellular junctions during sperm release and during spermatocyte translocation through the blood-testis barrier. Here, we use super-resolution (STED-stimulated emission depletion) and electron microscopy of immunolabeled sections of rat testis to clearly define the localization of anti-myosin VI reactivity both at apical and basal sites in the epithelium. In data stacks collected by STED imaging, staining at TBCs was predominantly associated with bulb regions of the complexes. At apical sites, when data stacks were analyzed with an Imaris software, staining appeared around and extended between adjacent bulbs. At basal sites, in addition to labeling at TBC bulbs, reactive sites appeared concentrated in regions close to but not directly associated with intercellular junctions. At the ultrastructural level, labeling was predominantly associated with cisternae of the endoplasmic reticulum associated with the bulbs of TBCs and near to basal junction complexes. We conclude that myosin VI may be associated with specific subdomains of the endoplasmic reticulum related to TBC bulbs and associated basal junction complexes between Sertoli cells.

另据报道,肌球蛋白VI与小鼠顶端小管复合体(TBC)的不同区域相关联,这些区域位于小鼠Sertoli细胞与晚期精子的附着点。在精子释放和精母细胞通过血-睾屏障转移的过程中,管-球复合体内化 "完整的 "细胞间连接。在这里,我们使用超分辨率(STED 刺激发射耗竭)和电子显微镜观察大鼠睾丸的免疫标记切片,以清楚地确定抗肌球蛋白 VI 反应在上皮顶端和基底部位的定位。在 STED 成像收集的数据堆栈中,TBC 的染色主要与复合体的球部区域相关。用 Imaris 软件分析顶端部位的数据堆栈时,染色出现在相邻球茎周围并延伸到球茎之间。在基底部位,除了在 TBC 球部出现标记外,反应点还集中在靠近细胞间连接的区域,但与细胞间连接没有直接关联。在超微结构水平上,标记主要与内质网的囊泡有关,并靠近基底连接复合体。我们的结论是,肌球蛋白VI可能与内质网中与TBC球相关的特定亚域以及与Sertoli细胞之间的基底连接复合体相关。
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引用次数: 0
Introducing our Associate Editorial Board: An interview with Agathe Chaigne, Utrecht University, The Netherlands. 介绍我们的副编辑委员会:采访荷兰乌特勒支大学的 Agathe Chaigne。
Pub Date : 2024-09-28 DOI: 10.1002/cm.21929
Paul Trevorrow, Agathe Chaigne
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引用次数: 0
Multifaceted role of the actin-binding protein WIP: Promotor and inhibitor of tumor progression and dissemination. 肌动蛋白结合蛋白 WIP 的多方面作用:肿瘤进展和扩散的促进因子和抑制因子
Pub Date : 2024-09-27 DOI: 10.1002/cm.21935
Jorge Alonso-Eiras, Ines M Anton

Cancer cells depend on actin cytoskeleton reorganization to achieve hallmark malignant functions including abnormal activation, proliferation, migration and invasiveness. (Neural)-Wiskott-Aldrich Syndrome protein ((N-)WASP) binds actin and forms a complex with the WASP-interacting protein (WIP), which plays a critical role in regulating the actin cytoskeleton, through (N)-WASP-dependent and independent functions. Mutations in the WIP gene (WIPF1) lead to severe early onset immunodeficiency in humans and severe autoimmunity and shortened lifespan in mice. This review covers the available evidence about the physiological role of WIP in different tissues and its contribution to human disease, focusing on cancer. In solid tumors overexpression of WIP has mostly been associated with tumor initiation, progression and dissemination through matrix degradation by invadopodia, while a suppressive function has been shown for WIP in certain hematological cancers. Interestingly, a minority of studies suggest a protective role for WIP in specific tumor contexts. These data support the need for further research to fully understand the mechanisms underlying WIP's diverse functions in health and disease and raise important questions for future work.

癌细胞依赖肌动蛋白细胞骨架重组来实现标志性的恶性功能,包括异常活化、增殖、迁移和侵袭性。(神经)-威斯科特-阿尔德里希综合征蛋白((N-)WASP)与肌动蛋白结合,并与 WASP 相互作用蛋白(WIP)形成复合物,后者通过依赖于 (N)-WASP 和独立于 (N)-WASP 的功能,在调节肌动蛋白细胞骨架方面发挥着关键作用。WIP 基因(WIPF1)的突变会导致人类严重的早发性免疫缺陷,小鼠则会出现严重的自身免疫和寿命缩短。本综述涵盖了有关 WIP 在不同组织中的生理作用及其对人类疾病的影响的现有证据,重点是癌症。在实体瘤中,WIP的过度表达主要与肿瘤的发生、发展以及通过内卷基质降解进行扩散有关,而在某些血液肿瘤中,WIP则具有抑制功能。有趣的是,少数研究表明 WIP 在特定的肿瘤环境中具有保护作用。这些数据支持了进一步研究的必要性,以充分了解 WIP 在健康和疾病中发挥多种功能的机制,并为未来的工作提出了重要问题。
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引用次数: 0
Tristetraprolin affects invasion-associated genes expression and cell motility in triple-negative breast cancer model. Tristetraprolin可影响三阴性乳腺癌模型中侵袭相关基因的表达和细胞运动。
Pub Date : 2024-09-25 DOI: 10.1002/cm.21934
Anastasiia Hubiernatorova, Josef Novak, Michaela Vaskovicova, David Sekac, Serhii Kropyvko, Zdenek Hodny

Tristetraprolin (TTP) is an RNA-binding protein that negatively regulates its target mRNAs and has been shown to inhibit tumor progression and invasion. Tumor invasion requires precise regulation of cytoskeletal components, and dysregulation of cytoskeleton-associated genes can significantly alter cell motility and invasive capability. Several genes, including SH3PXD2A, SH3PXD2B, CTTN, WIPF1, and WASL, are crucial components of the cytoskeleton reorganization machinery and are essential for adequate cell motility. These genes are also involved in invasion processes, with SH3PXD2A, SH3PXD2B, WIPF1, and CTTN being key components of invadopodia-specialized structures that facilitate invasion. However, the regulation of these genes is not well understood. This study demonstrates that ectopic expression of TTP in MDA-MB-231 cells leads to decreased mRNA levels of CTTN and SH3PXD2A, as well as defects in cell motility and actin filament organization. Additionally, doxorubicin significantly increases TTP expression and reduces the mRNA levels of cytoskeleton-associated genes, enhancing our understanding of how doxorubicin may affect the transcriptional profile of cells. However, doxorubicin affects target mRNAs differently than TTP ectopic expression, suggesting it may not be the primary mechanism of doxorubicin in breast cancer (BC) treatment. High TTP expression is considered as a positive prognostic marker in multiple cancers, including BC. Given that doxorubicin is a commonly used drug for treating triple-negative BC, using TTP as a prognostic marker in this cohort of patients might be limited since it might be challenging to understand if high TTP expression occurred due to the favorable physiological state of the patient or as a consequence of treatment.

Tristetraprolin(TTP)是一种 RNA 结合蛋白,可对其靶 mRNA 进行负调控,并被证明可抑制肿瘤的进展和侵袭。肿瘤侵袭需要细胞骨架成分的精确调控,细胞骨架相关基因的失调可显著改变细胞的运动性和侵袭能力。包括 SH3PXD2A、SH3PXD2B、CTTN、WIPF1 和 WASL 在内的一些基因是细胞骨架重组机制的重要组成部分,对细胞的充分运动至关重要。这些基因还参与侵袭过程,其中 SH3PXD2A、SH3PXD2B、WIPF1 和 CTTN 是促进侵袭的侵袭灶特化结构的关键组成部分。然而,人们对这些基因的调控还不甚了解。本研究表明,在 MDA-MB-231 细胞中异位表达 TTP 会导致 CTTN 和 SH3PXD2A 的 mRNA 水平下降,以及细胞运动和肌动蛋白丝组织的缺陷。此外,多柔比星会显著增加 TTP 的表达,降低细胞骨架相关基因的 mRNA 水平,从而加深我们对多柔比星如何影响细胞转录谱的理解。然而,多柔比星对靶标 mRNA 的影响不同于 TTP 的异位表达,这表明它可能不是多柔比星治疗乳腺癌(BC)的主要机制。TTP的高表达被认为是包括乳腺癌在内的多种癌症的阳性预后标志。鉴于多柔比星是治疗三阴性乳腺癌的常用药物,在这组患者中使用TTP作为预后标志物可能会受到限制,因为要了解TTP的高表达是由于患者的良好生理状态还是治疗的结果可能会很困难。
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引用次数: 0
Distinct molecular features of FLNC mutations, associated with different clinical phenotypes. FLNC 基因突变的不同分子特征与不同的临床表型有关。
Pub Date : 2024-09-24 DOI: 10.1002/cm.21922
Klimenko E S, Zaytseva A K, Sorokina M Yu, Perepelina K I, Rodina N L, Nikitina E G, Sukhareva K S, Khudiakov A A, Vershinina T L, Muravyev A S, Mikhaylov E N, Pervunina T M, Vasichkina E S, Kostareva A A

Filamin С is a key an actin-binding protein of muscle cells playing a critical role in maintaining structural integrity and sarcomere organization. FLNC mutations contribute to various types of cardiomyopathies and myopathies through potentially different molecular mechanisms. Here, we described the impact of two clinically distinct FLNC variants (R1267Q associated with arrhythmogenic cardiomyopathy and V2264M associated with restrictive cardiomyopathy) on calcium homeostasis, electrophysiology, and gene expression profile of iPSC-derived patient-specific cardiomyocytes. We demonstrated that R1267Q FLNC variant leads to greater disturbances in calcium dynamics, Nav1.5 kinetics and action potentials compared to V2264M variant. These functional characteristics were accompanied by transcriptome changes in genes linked to action potential and sodium transport as well as structural cardiomyocyte genes. We suggest distinct molecular effects of two FLNC variants linked to different types of cardiomyopathies in terms of myofilament structure, electrophysiology, ion channel function and intracellular calcium homeostasis providing the molecular the bases for their different clinical phenotypes.

纤 维素С是肌肉细胞中一种关键的肌动蛋白结合蛋白,在维持结构完整性和肌节组织方面起着至关重要的作用。FLNC 变异通过潜在的不同分子机制导致各种类型的心肌病和肌病。在这里,我们描述了两种临床上不同的 FLNC 变异(R1267Q 与心律失常性心肌病相关,V2264M 与限制性心肌病相关)对钙稳态、电生理学和 iPSC 衍生的患者特异性心肌细胞基因表达谱的影响。我们证实,与 V2264M 变体相比,R1267Q FLNC 变体会导致钙动力学、Nav1.5 动力学和动作电位的更大紊乱。伴随这些功能特征的是与动作电位和钠转运相关的基因以及心肌细胞结构基因的转录组变化。我们认为,与不同类型心肌病有关的两种 FLNC 变体在肌丝结构、电生理学、离子通道功能和细胞内钙平衡方面具有不同的分子效应,为其不同的临床表型提供了分子基础。
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引用次数: 0
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Cytoskeleton (Hoboken, N.J.)
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