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Analysis of engineered T7 bacteriophages containing genetic sequences encoding antimicrobial peptides.
Pub Date : 2025-01-15 eCollection Date: 2024-01-01 DOI: 10.3389/frabi.2024.1515874
Tobias Ludwig, Daniela Volke, Andor Krizsan

Because of the global spread of multi- and pan-resistant bacteria, there is a need to identify, research, and develop new strategies to combat these pathogens. In a previous proof-of-concept study, we presented an innovative strategy by genetically modifying lytic T7 bacteriophages. We integrated DNA fragments encoding for derivatives of the antimicrobial peptide (AMP) apidaecin into the phage genome to induce the production and release of apidaecin within the T7 infection cycle, thereby also targeting phage-resistant Escherichia coli bacteria. In this follow-up study, we optimized the apidaecin encoding insert to improve the expression of the apidaecin derivative Api805 by adding the secretion signal peptide of the OmpA protein. This prevented the detrimental effects of the peptide on the producing bacterial cell after its production. The integration of two copies of the OmpA-Api805 insert into the phage genome resulted in T7Select-2xOmpA-Api805 phages, which had a partially improved activity in inhibiting phage-resistant E. coli compared to the T7Select phages without insert and with only one copy of the OmpA-Api805 insert. Additionally, we showed that the combinatorial use of the lytic bacteriophage T7Select with the highly active and lytic AMPs CRAMP (cathelicidin-related AMP) and melittin against E. coli made the lysis process of the phage and the peptides more effective and prevented the growth of potentially AMP- and phage-resistant E. coli strains. The integration of DNA sequences derived from CRAMP and melittin into the phage genome resulted in the created T7Select-(M)CRAMP and T7Select-(M)melittin phages, which showed a lysis behavior like the phage without insert and partially inhibited the growth of potentially phage-resistant E. coli strains after the phage-mediated lysis.

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引用次数: 0
Physicians', pharmacists', and nurses' education of patients about antibiotic use and antimicrobial resistance in primary care settings: a qualitative systematic literature review.
Pub Date : 2025-01-09 eCollection Date: 2024-01-01 DOI: 10.3389/frabi.2024.1507868
Lavinia Bianca Balea, Ragnhild J A Gulestø, Hongxuan Xu, Stinne Glasdam

Background: Patients' adherence to antibiotic treatment and related prevention of AMR is significant. Understanding healthcare professionals' strategies for advising and educating patients in primary care settings is crucial.

Aim: From the perspectives of professionals and patients, to explore how physicians, pharmacists, and nurses educate patients about antibiotic use and antimicrobial resistance in primary care settings.

Methods: A qualitative systematic literature review was conducted in MEDLINE, EMBASE, CINAHL Complete, Eric, SocINDEX, PsycInfo, Web of Science and Scopus. The study included 102 publications, followed PRISMA recommendations and was registered in PROSPERO (reg.no. CRD4202455761). The studies were screened and selected based on specific inclusion and exclusion criteria using Covidence. Quality appraisal followed the Critical Appraisal Skills Program (CASP) qualitative study checklist. Data were extracted, and the analysis consisted of a descriptive numerical summary analysis and a qualitative thematic analysis.

Results: The analyzed studies spanned multiple countries and settings and included perspectives of primary care physicians, pharmacists, nurses and patients. Two main themes emerged: (1) Relationships between professionals and patients influenced educational strategies, showing that trust and rapport between healthcare professionals and patients played a crucial role in shaping educational strategies around antibiotic use; (2) The organizational structures challenged professionals in guiding and educating patients, highlighting how limited resources, time constraints, and system-level pressures hindered healthcare professionals' ability to provide consistent and effective education. Often, structural challenges led to not educating the patients on the risks of antibiotic misuse and antimicrobial resistance. The use of delayed prescriptions emerged as a strategy for improved AMR stewardship and to meet patients' expectations for antibiotic treatment, though it raised concerns about undermining professional responsibility and authority in ensuring appropriate antibiotic use.

Conclusion: Healthcare professionals' role in educating patients about antibiotic use and AMR in primary care settings was complex, with different challenges faced by nurses, pharmacists and primary care physicians. These challenges extended beyond the clinical level, including relational, social and structural factors. Power dynamics, trust issues, and time pressures often hindered effective education on antibiotic use. Addressing gaps in education on antibiotic use and AMR requires acknowledging these multifaceted challenges, with future efforts focusing on better supporting healthcare professionals in this context.

Systematic review registration: https://www.crd.york.ac.uk/prospero/, identifier CRD4202455761.

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引用次数: 0
Escherichia coli as a sentinel in the assessment of antimicrobial resistance in the tilapia production chain: from production environment to the final product. 在罗非鱼生产链中:从生产环境到最终产品的抗菌素耐药性评估中,大肠杆菌作为哨兵。
Pub Date : 2024-10-22 eCollection Date: 2024-01-01 DOI: 10.3389/frabi.2024.1461662
Sthéfany Da Cunha Dias, Letícia Roberta Martins Costa, Ana Beatriz Garcez Buiatte, Marcus Vinícius Coutinho Cossi, Luís Augusto Nero, Ricardo Seiti Yamatogi, Luciano Dos Santos Bersot, Juliano Gonçalves Pereira

Introduction: The intensification of tilapia production has increased animal density in tanks, leading to more frequent exposure to pathogenic agents and compromising the quality of fish products. Antimicrobial resistance is a global concern that affects human treatment, and sentinel microorganisms like Escherichia coli are crucial for monitoring production chains, especially in aquaculture, where research is still limited. The aim of this study was to identify the presence of E. coli and investigate its antimicrobial resistance profiles throughout the entire tilapia production chain.

Methods: A total of 240 samples were collected from various points in the production process: carcasses before scaling (Ca), scaling wastewater (Sw), filleting wastewater (Fw), fillet washing wastewater (Tw), fillet handling surfaces (Su), and pre-packaged fillets (Pf). The samples were collected during 10 visits, each corresponding to animals from different farms. E. coli isolates were identified using MacConkey agar and biochemical tests. Phenotypic resistance profiles were determined using nine classes of antimicrobials. Extended- spectrum b-lactamase (ESBL) production was identified with ceftazidime and cefotaxime and confirmed by a double-disc synergy test. Isolates were classified as sensitive or resistant based on the inhibition zone. Multidrug-resistant (MDR) was defined as resistance to at least one agent in three or more antimicrobial categories, while extensively drug-resistant (XDR) was defined as resistance to at least one agent in all but two or fewer categories.

Results: Overall, 50.8% of the samples (122/240) tested positive for E. coli, with 403 isolates identified. Of these, 33% (133/403) were resistant to at least two antimicrobials, and 20% (48/240) of the samples had MDR isolates, with the highest frequency found at the filleting point (Fw), which also had the only XDR profile. Resistance was most commonly observed against amoxicillin (35.73%), tetracycline (30.77%), and ciprofloxacin (26.30%).

Discussion: These findings emphasize the importance of E. coli as an indicator of antimicrobial resistance throughout tilapia processing and highlight the need for good production practices and qualified technical support to mitigate risks to public health, animal health, and the environment.

导言:罗非鱼生产的集约化增加了鱼缸中的动物密度,导致更频繁地暴露于病原体并损害鱼产品的质量。抗菌素耐药性是一个影响人类治疗的全球性问题,大肠杆菌等哨点微生物对于监测生产链至关重要,特别是在水产养殖领域,而水产养殖的研究仍然有限。本研究的目的是确定大肠杆菌的存在,并调查其在整个罗非鱼生产链中的抗微生物药物耐药性。方法:从生产过程的各个环节采集240份样品:鳞前胴体(Ca)、鳞废水(Sw)、鱼片废水(Fw)、鱼片洗涤废水(Tw)、鱼片处理表面(Su)和预包装鱼片(Pf)。样本在10次访问中收集,每次访问对应于来自不同农场的动物。采用麦康基琼脂和生化试验对大肠杆菌分离株进行鉴定。使用9类抗菌素测定表型耐药谱。用头孢他啶和头孢噻肟鉴定了广谱b-内酰胺酶(ESBL)的产生,并通过双盘协同试验证实。根据抑菌区将分离株分为敏感株和耐药株。多重耐药(MDR)被定义为对三种或更多种抗菌素类别中至少一种药物的耐药性,而广泛耐药(XDR)被定义为对除两种或更少类别外的所有类别中至少一种药物的耐药性。结果:总体而言,50.8%的样本(122/240)检测出大肠杆菌阳性,鉴定出403株。其中33%(133/403)的样本至少对两种抗菌素具有耐药性,20%(48/240)的样本有MDR分离株,在夹角点(Fw)发现的频率最高,这也是唯一的XDR谱。耐药率最高的是阿莫西林(35.73%)、四环素(30.77%)和环丙沙星(26.30%)。讨论:这些发现强调了大肠杆菌作为整个罗非鱼加工过程中抗微生物药物耐药性指标的重要性,并强调需要良好的生产规范和合格的技术支持,以减轻对公共卫生、动物卫生和环境的风险。
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引用次数: 0
Antimicrobial stewardship: from theory to reality in a resource-limited setting (and beyond). 抗菌剂管理:在资源有限的环境下(及以后)从理论到现实。
Pub Date : 2024-10-21 eCollection Date: 2024-01-01 DOI: 10.3389/frabi.2024.1492319
Eric Ochoa-Hein, Arturo Galindo-Fraga

Correct use of antibiotics is paramount to present global health. Among other actions, antimicrobial stewardship emphasizes de-escalation and suspension whenever possible. Nonetheless, roadblocks can be encountered (e.g., lack of culture results or availability of specific antibiotic classes). Furthermore, in an ever-increasing interconnected world, global success relies on local success. In this perspective, a particular case study in a resource-limited setting is an example of the many difficulties encountered in the fight against antimicrobial resistance that could hamper global advancements.

正确使用抗生素对当前全球卫生至关重要。除其他行动外,抗菌素管理强调尽可能减少升级和暂停。然而,可能会遇到障碍(例如,缺乏培养结果或特定抗生素类别的可用性)。此外,在一个联系日益紧密的世界里,全球的成功依赖于本地的成功。从这个角度来看,在资源有限的情况下进行的特定案例研究是在抗击抗菌素耐药性方面遇到的许多困难的一个例子,这些困难可能阻碍全球进展。
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引用次数: 0
Defense mechanisms of Salmonella against antibiotics: a review. 沙门氏菌对抗生素的防御机制综述。
Pub Date : 2024-09-17 eCollection Date: 2024-01-01 DOI: 10.3389/frabi.2024.1448796
Anuradha Jeewantha Punchihewage-Don, Priyanka Nilmini Ranaweera, Salina Parveen

Salmonella is a foodborne pathogenic bacterium that causes salmonellosis worldwide. Also, Salmonella is considered a serious problem for food safety and public health. Several antimicrobial classes including aminoglycosides, tetracyclines, phenols, and β-Lactams are used to treat Salmonella infections. Antibiotics have been prescribed for decades to treat infections caused by bacteria in human and animal healthcare. However, intensive use of antibiotics resulted in antibiotic resistance (AR) among several foodborne bacteria including Salmonella. Furthermore, multi-drug resistance (MDR) of Salmonella has increased dramatically. In addition to MDR Salmonella, extensively drug resistant (XDR) as well as pan drug resistant (PDR) Salmonella were reported globally. Therefore, increasing AR is becoming a serious universal public health crisis. Salmonella developed many mechanisms to ensure its survival against antimicrobials. The most prominent defense mechanisms against these antibiotics include enzymatic inactivation, expelling drugs from the cell through efflux pumps, altering the structure of drugs, and changing or protecting the targets of drugs. Additionally, the formation of biofilms and plasmid-mediated AR by Salmonella, enhancing its resistance to various antibiotics, making it a challenging pathogen in both healthcare and food industry settings. This review focuses exclusively on providing a detailed overview of the mechanisms of AR in Salmonella.

沙门氏菌是一种食源性致病菌,在世界范围内引起沙门氏菌病。此外,沙门氏菌被认为是食品安全和公众健康的严重问题。包括氨基糖苷类、四环素类、酚类和β-内酰胺类在内的几种抗菌药物被用于治疗沙门氏菌感染。几十年来,抗生素一直被用于治疗人类和动物保健中由细菌引起的感染。然而,抗生素的大量使用导致包括沙门氏菌在内的几种食源性细菌产生抗生素耐药性。此外,沙门氏菌的多药耐药(MDR)急剧增加。除耐多药沙门氏菌外,全球还报告了广泛耐药沙门氏菌和泛耐药沙门氏菌。因此,日益严重的AR正在成为一种严重的全球性公共卫生危机。沙门氏菌发展了许多机制以确保其在抗菌剂中存活。针对这些抗生素最突出的防御机制包括酶失活、通过外排泵将药物从细胞中排出、改变药物结构以及改变或保护药物靶点。此外,沙门氏菌形成生物膜和质粒介导的AR,增强其对各种抗生素的耐药性,使其成为医疗保健和食品工业环境中的一种具有挑战性的病原体。这篇综述的重点是提供沙门氏菌的AR机制的详细概述。
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引用次数: 0
A retrospective review of the common childhood illnesses and the indications for antibiotic prescription at community hospital in Malawi. 马拉维社区医院常见儿童疾病及抗生素处方指征的回顾性分析。
Pub Date : 2024-09-05 eCollection Date: 2024-01-01 DOI: 10.3389/frabi.2024.1447435
Adriano Focus Lubanga, Chana Khuluza, Jamillah Muhyuddin, Reuben Simfukwe, Frank Kaphesi, Yeo Hwan Yeum, Joshua J Yoon, Changwoo Kim, Seunghyun Kim, Si Yeon Kim, Ji An Lee, Jooheon Park, David Kim, Akim Nelson Bwanali, Lee Woohyung, Thomas Nyirenda
<p><strong>Background: </strong>Childhood remains a vulnerable period and a key determiner for adult health. Various illnesses experienced by children in their early years determine future performance and contribution to society. Acute and chronic infectious diseases, undernutrition, and early childhood non-communicable diseases have greatly been linked to intellectual disability, poor childhood development, increased morbidity, and household and healthcare economic costs. In most developing countries, infections contribute to a larger burden of disease. Despite this being the case, most developing countries have a limited range of diagnostic capacity and access to a wide range spectrum of WHO Access, Watch and Reserve antibiotics. This leads to overuse and misuse of the available antibiotics and a wide range spread of resistance strains. In this study, we evaluated common childhood presentations and indications for antibiotic prescriptions at a community hospital in Malawi.</p><p><strong>Objective: </strong>This study analyzed common childhood Clinical Presentations and antibiotic prescription patterns at the pediatric outpatient department (OPD) at St. Gabriel Community Mission Hospital in Malawi.</p><p><strong>Methods: </strong>A retrospective search of all outpatient routinely corrected data from St. Gabriel Community Mission Hospital between January to December 2022 was carried out. Manual screening was done on all appropriate routines under 14 medical records, and prespecified variables were extracted. Data collected consisted of total OPD patient number, age, sex, diagnosis and prescription.</p><p><strong>Results: </strong>A total of 2711 children under 15 years of age were included, with 53.9% being males. The majority of them were below the age of 5 (59.5%). 30% of the cases seen in the department were attributable to respiratory presentation, representing the majority of the cases seen. Sepsis and enteric diseases also constituted the majority of the cases seen and contributed 18% and 7% respectively. 68% per cent of the children seen during the period of the study had an antibiotic prescription, with the majority having only one antibiotic prescribed (31.7%). Overall, amoxicillin constituted the most commonly prescribed antibiotic for the whole system, while metronidazole was the most commonly prescribed antibiotic among enteric illnesses. Being under five was associated with a higher likelihood of antibiotic prescription (p <0.001). There were no significant differences in antibiotic prescription by gender and prescribing quarter of the year.</p><p><strong>Conclusion: </strong>Our findings suggest that there could be overuse and misuse of antibiotics within community hospitals. Overuse and misuse of antibiotics at the community level is closely linked to limited cytobacteriological testing, and limited access to all categories of antibiotics. Amid limited resources, more research is needed to understand the barriers and facilitators t
背景:童年仍然是一个脆弱的时期,也是决定成人健康的关键因素。儿童在早期经历的各种疾病决定了他们未来的表现和对社会的贡献。急性和慢性传染病、营养不良和幼儿非传染性疾病与智力残疾、儿童发育不良、发病率增加以及家庭和保健经济成本有很大关系。在大多数发展中国家,感染造成了更大的疾病负担。尽管如此,大多数发展中国家的诊断能力有限,并且无法获得世卫组织可获取、观察和储备抗生素的广泛范围。这导致现有抗生素的过度使用和误用以及耐药菌株的广泛传播。在这项研究中,我们评估了马拉维一家社区医院常见的儿童表现和抗生素处方的适应症。目的:本研究分析了马拉维圣加布里埃尔社区教会医院儿科门诊(OPD)常见的儿童临床表现和抗生素处方模式。方法:回顾性检索2022年1月至12月圣加布里埃尔社区教会医院所有门诊常规校正数据。对14份医疗记录下的所有适当常规进行人工筛选,并提取预先指定的变量。收集的数据包括门诊病人总数、年龄、性别、诊断和处方。结果:共纳入15岁以下儿童2711例,其中男性占53.9%。其中以5岁以下儿童居多(59.5%)。该科30%的病例可归因于呼吸症状,占所见病例的大多数。脓毒症和肠道疾病也占多数,分别占18%和7%。在研究期间,68%的儿童有抗生素处方,其中大多数只开了一种抗生素(31.7%)。总体而言,阿莫西林是整个系统中最常用的抗生素,甲硝唑是肠道疾病中最常用的抗生素。结论:我们的研究结果表明,社区医院可能存在抗生素的过度使用和误用。社区一级抗生素的过度使用和误用与有限的细胞细菌学检测和有限的获得所有类别抗生素的机会密切相关。在资源有限的情况下,需要更多的研究来了解初级卫生保健工作者中适当和不适当抗生素处方的障碍和促进因素。此外,需要对使用经过验证的抗微生物治疗指南和即时快速诊断检测进行更多培训,以改善合理使用抗生素。
{"title":"A retrospective review of the common childhood illnesses and the indications for antibiotic prescription at community hospital in Malawi.","authors":"Adriano Focus Lubanga, Chana Khuluza, Jamillah Muhyuddin, Reuben Simfukwe, Frank Kaphesi, Yeo Hwan Yeum, Joshua J Yoon, Changwoo Kim, Seunghyun Kim, Si Yeon Kim, Ji An Lee, Jooheon Park, David Kim, Akim Nelson Bwanali, Lee Woohyung, Thomas Nyirenda","doi":"10.3389/frabi.2024.1447435","DOIUrl":"10.3389/frabi.2024.1447435","url":null,"abstract":"&lt;p&gt;&lt;strong&gt;Background: &lt;/strong&gt;Childhood remains a vulnerable period and a key determiner for adult health. Various illnesses experienced by children in their early years determine future performance and contribution to society. Acute and chronic infectious diseases, undernutrition, and early childhood non-communicable diseases have greatly been linked to intellectual disability, poor childhood development, increased morbidity, and household and healthcare economic costs. In most developing countries, infections contribute to a larger burden of disease. Despite this being the case, most developing countries have a limited range of diagnostic capacity and access to a wide range spectrum of WHO Access, Watch and Reserve antibiotics. This leads to overuse and misuse of the available antibiotics and a wide range spread of resistance strains. In this study, we evaluated common childhood presentations and indications for antibiotic prescriptions at a community hospital in Malawi.&lt;/p&gt;&lt;p&gt;&lt;strong&gt;Objective: &lt;/strong&gt;This study analyzed common childhood Clinical Presentations and antibiotic prescription patterns at the pediatric outpatient department (OPD) at St. Gabriel Community Mission Hospital in Malawi.&lt;/p&gt;&lt;p&gt;&lt;strong&gt;Methods: &lt;/strong&gt;A retrospective search of all outpatient routinely corrected data from St. Gabriel Community Mission Hospital between January to December 2022 was carried out. Manual screening was done on all appropriate routines under 14 medical records, and prespecified variables were extracted. Data collected consisted of total OPD patient number, age, sex, diagnosis and prescription.&lt;/p&gt;&lt;p&gt;&lt;strong&gt;Results: &lt;/strong&gt;A total of 2711 children under 15 years of age were included, with 53.9% being males. The majority of them were below the age of 5 (59.5%). 30% of the cases seen in the department were attributable to respiratory presentation, representing the majority of the cases seen. Sepsis and enteric diseases also constituted the majority of the cases seen and contributed 18% and 7% respectively. 68% per cent of the children seen during the period of the study had an antibiotic prescription, with the majority having only one antibiotic prescribed (31.7%). Overall, amoxicillin constituted the most commonly prescribed antibiotic for the whole system, while metronidazole was the most commonly prescribed antibiotic among enteric illnesses. Being under five was associated with a higher likelihood of antibiotic prescription (p &lt;0.001). There were no significant differences in antibiotic prescription by gender and prescribing quarter of the year.&lt;/p&gt;&lt;p&gt;&lt;strong&gt;Conclusion: &lt;/strong&gt;Our findings suggest that there could be overuse and misuse of antibiotics within community hospitals. Overuse and misuse of antibiotics at the community level is closely linked to limited cytobacteriological testing, and limited access to all categories of antibiotics. Amid limited resources, more research is needed to understand the barriers and facilitators t","PeriodicalId":73065,"journal":{"name":"Frontiers in antibiotics","volume":"3 ","pages":"1447435"},"PeriodicalIF":0.0,"publicationDate":"2024-09-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11731797/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143017391","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Practices, strategies, and challenges in antibiotic treatment and prevention of antimicrobial resistance from the perspectives of Romanian community pharmacists and general practitioners: a Goffman-inspired qualitative interview study. 从罗马尼亚社区药剂师和全科医生的角度来看,抗生素治疗和预防抗菌素耐药性的实践、策略和挑战:戈夫曼启发的定性访谈研究。
Pub Date : 2024-09-04 eCollection Date: 2024-01-01 DOI: 10.3389/frabi.2024.1439688
Lavinia Bianca Balea, Stinne Glasdam

Introduction: Antimicrobial resistance (AMR) represents a persistent and ascensive global threat influenced by antibiotic misuse and overuse. In the Romanian context, patterns of antibiotic consumption and resistance within the healthcare system are marked in the red scenario on the European map. General practitioners and pharmacists, among others, play a major role in stewardship towards AMR.

Aim: To explore the practices, strategies, and challenges in antibiotic treatment and prevention of antimicrobial resistance from the perspectives of Romanian community pharmacists and general practitioners.

Method and materials: Semi-structured interviews were conducted with six general practitioners and five community pharmacists in Romania from January to March 2024. An inductive, Goffman theory-inspired thematic analysis was conducted, inspired by Braun and Clarke's thematic analysis method, consisting of familiarization with the data, iterative coding guided by theoretically inspired questions, and identification and refinement of (sub)themes. Goffman's theory of social interaction, focusing on the concepts of front stage, backstage, and roles, guided the analytical questions.

Results: The results were presented in three overarching themes: 'Knowledge acquired backstage to support challenges and performance on front stage', 'Adapting roles and performances on the front stage: A mix of structured and twisted acts', and 'Interprofessional Collaboration: A latent part in the play's roles and performances'. Professionals prepared their understandings of AMR and antibiotics backstage, with an awareness of the challenges rooted in the Romanian context. The front stage scenario evolved from structured antibiotic performances led by AMR strategies with compliant actors to challenging performances influenced by actors which changed the course of performances and intended AMR strategies. The revealed competition between general practitioners and pharmacists further complicated antibiotic use and AMR-related performances.

Conclusion: The Romanian socio-political system influenced the course of antibiotic treatment and the professionals' intended antibiotic related practices and AMR strategies. The study showed a theory-practice gap in health professionals' practices, leading to limited strategy integration towards AMR and increased antibiotic use. The study underscores the need for context-specific policies and interventions to minimize identified gaps.

抗菌素耐药性(AMR)是受抗生素滥用和过度使用影响的持续和日益严重的全球威胁。在罗马尼亚的情况下,卫生保健系统内抗生素消费和耐药性的模式在欧洲地图上的红色情景中被标记出来。除其他外,全科医生和药剂师在管理抗菌素耐药性方面发挥着重要作用。目的:从罗马尼亚社区药剂师和全科医生的角度探讨抗生素治疗和预防抗生素耐药性的做法、策略和挑战。方法与材料:于2024年1 - 3月对罗马尼亚6名全科医生和5名社区药师进行半结构化访谈。受Braun和Clarke的主题分析方法的启发,采用归纳式、Goffman理论启发的主题分析方法,包括熟悉数据、以理论启发的问题为指导进行迭代编码、识别和细化(子)主题。戈夫曼的社会互动理论以前台、后台和角色的概念为指导,指导了分析问题。结果:结果呈现在三个总体主题中:“在后台获得的知识以支持前台的挑战和表演”,“在前台适应角色和表演:混合结构化和扭曲的行为”,以及“跨专业合作:戏剧角色和表演中的潜在部分”。专业人员在后台准备了他们对抗菌素耐药性和抗生素的理解,并意识到根植于罗马尼亚背景的挑战。前舞台场景从由顺从的演员主导的抗菌素耐药性策略的结构化抗生素表演演变为受演员影响的挑战性表演,这改变了表演的过程和预期的抗菌素耐药性策略。全科医生和药剂师之间的竞争进一步复杂化了抗生素的使用和抗生素耐药性相关的表现。结论:罗马尼亚的社会政治制度影响了抗生素治疗的过程和专业人员的抗生素相关做法和抗菌素耐药性策略。该研究表明,卫生专业人员的实践存在理论与实践差距,导致针对抗生素耐药性的战略整合有限,抗生素使用增加。该研究强调需要根据具体情况制定政策和干预措施,以尽量减少已发现的差距。
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引用次数: 0
Acinetobacter spp. in neonatal sepsis: an urgent global threat. 新生儿败血症中的不动杆菌:一个紧迫的全球威胁。
Pub Date : 2024-09-03 eCollection Date: 2024-01-01 DOI: 10.3389/frabi.2024.1448071
Kamla Pillay, Anirban Ray-Chaudhuri, Seamus O'Brien, Paul Heath, Mike Sharland

Neonatal sepsis causes substantial morbidity and mortality, the burden of which is carried by low-income countries (LICs). The emergence of multidrug-resistant pathogens in vulnerable neonatal populations poses an urgent threat to infant survival. Acinetobacter spp. are increasingly responsible for severe disease in neonates globally. The cause of this escalation remains unclear, but host, pathogen and environmental factors are all likely to contribute. Acinetobacter spp. strains are frequently resistant to the first line empirical treatment for neonatal sepsis as recommended by the World Health Organization (WHO), ampicillin and gentamicin, rendering these antibiotics ineffectual in many critically ill neonates. The resultant escalation to broader spectrum antibiotic regimens in neonatal intensive care units (NICUs) worldwide has led to the emergence of more resistant strains, including carbapenem-resistant Acinetobacter baumanii (CRAB), resulting in infections that are ever more difficult to treat. While some existing antimicrobial agents are under consideration for treatment of Acinetobacter spp. infections, the majority remain a long way from clinical use in neonates. Further research into the clinical phenotype of these infections, transmission dynamics and preventative measures are urgently needed to reduce neonatal deaths. This review aims to summarise the role of Acinetobacter spp. in neonatal sepsis, including host, pathogen and environmental factors, the global epidemiology and clinical features of the disease, the treatment options, and future research priorities.

新生儿败血症导致大量发病率和死亡率,其负担由低收入国家承担。易感新生儿群体中出现耐多药病原体,对婴儿生存构成紧迫威胁。全球范围内,不动杆菌越来越多地导致新生儿严重疾病。这种升级的原因尚不清楚,但宿主、病原体和环境因素都可能起作用。不动杆菌菌株经常对世界卫生组织(WHO)推荐的新生儿败血症一线经验治疗氨苄西林和庆大霉素产生耐药性,使这些抗生素对许多危重新生儿无效。全球新生儿重症监护病房(NICUs)使用更广泛的抗生素治疗方案导致出现更多耐药菌株,包括耐碳青霉烯鲍曼不动杆菌(CRAB),导致感染更加难以治疗。虽然一些现有的抗菌剂正在考虑用于治疗不动杆菌感染,但大多数离新生儿临床使用还有很长的路要走。迫切需要进一步研究这些感染的临床表型、传播动态和预防措施,以减少新生儿死亡。本文旨在总结不动杆菌在新生儿脓毒症中的作用,包括宿主、病原体和环境因素,疾病的全球流行病学和临床特征,治疗方案和未来的研究重点。
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引用次数: 0
In vitro antimicrobial susceptibility of clinical isolates from adult and paediatric patients in Jordan: Antimicrobial Testing Leadership and Surveillance (ATLAS) 2010–2021 约旦成人和儿科患者临床分离物的体外抗菌药物敏感性:2010-2021 年抗菌药物测试领导和监测(ATLAS)
Pub Date : 2024-08-08 DOI: 10.3389/frabi.2024.1375980
Dima Al Jammal, Julia Bachir, Jihane A. Moussa, Jamal Wadi Al Ramahi
To evaluate the in vitro antimicrobial susceptibilities of Gram-positive and Gram-negative isolates from patients in Jordan between 2010 and 2021, through the Antimicrobial Testing Leadership and Surveillance (ATLAS) programme.Medical centres in Jordan collected bacterial isolates from hospitalised patients with defined infection sources between 2010 and 2021 (no isolates collected in 2014). Antimicrobial susceptibility was interpreted using CLSI standards. FDA-approved breakpoints were applied for tigecycline. The identification of β-lactamase genes was performed for a proportion of isolates using multiplex PCR assays.More than 92% of Acinetobacter baumannii collected were multidrug-resistant (MDR) and/or carbapenem-resistant (CR), and > 50% susceptibility was reported only to minocycline (62.2% among both MDR and CR isolates). Rates of MDR and CR Pseudomonas aeruginosa were 14.3% and 20.5%, respectively, and among all P. aeruginosa collected from adults, susceptibility to ceftazidime/avibactam was 95.3% and to ceftolozane/tazobactam was 88.4%. For Escherichia coli from adults and MDR E. coli, susceptibility to ceftazidime/avibactam, ceftolozane/tazobactam, imipenem, meropenem and meropenem/vaborbactam was 92.1%–98.7%. Susceptibility to tigecycline was > 94% among Klebsiella pneumoniae from adult, paediatric, and ICU patients (all ages). CTX-M-15 was the most frequently identified β-lactamase gene among E. coli and K. pneumoniae. Susceptibility to most antimicrobial agents was < 50% among K. pneumoniae carrying CTX-M-15, CTX-M-9-type, NDM-5, and/or OXA-48 β-lactamase genes. All S. aureus collected were susceptible to teicoplanin, vancomycin, daptomycin, linezolid and tigecycline, with 96.1% of S. aureus from adults were susceptible to ceftaroline. Overall, 58.8% of Staphylococcus aureus were MRSA.This study provides valuable information regarding antimicrobial susceptibility in Jordan between 2010 and 2021. Continued monitoring of in vitro antimicrobial susceptibility is critical in the fight against antimicrobial resistance.
约旦的医疗中心在 2010 年至 2021 年间从有明确感染源的住院患者中收集细菌分离物(2014 年未收集分离物)。抗菌药敏感性采用 CLSI 标准进行解释。对替加环素采用了 FDA 批准的断点。在收集到的鲍曼不动杆菌中,超过 92% 对多种药物耐药 (MDR) 和/或碳青霉烯耐药 (CR),仅对米诺环素的敏感性大于 50%(在 MDR 和 CR 分离物中均为 62.2%)。MDR和CR铜绿假单胞菌的比例分别为14.3%和20.5%,在从成人中收集的所有铜绿假单胞菌中,对头孢唑肟/阿维菌素的敏感率为95.3%,对头孢羟氨苄/他唑巴坦的敏感率为88.4%。成人大肠埃希菌和耐药大肠埃希菌对头孢他啶/阿维菌素、头孢唑烷/他唑巴坦、亚胺培南、美罗培南和美罗培南/伐硼巴坦的敏感率为 92.1%-98.7%。成人、儿科和重症监护室患者(所有年龄段)中的肺炎克雷伯菌对替加环素的敏感性大于 94%。在大肠杆菌和肺炎克雷伯菌中,CTX-M-15 是最常发现的 β-内酰胺酶基因。携带 CTX-M-15、CTX-M-9 型、NDM-5 和/或 OXA-48 β-内酰胺酶基因的肺炎双球菌对大多数抗菌药物的敏感性低于 50%。收集到的所有金黄色葡萄球菌都对替考拉宁、万古霉素、达托霉素、利奈唑胺和替加环素敏感,96.1%的成人金黄色葡萄球菌对头孢他啶敏感。总体而言,58.8% 的金黄色葡萄球菌为 MRSA。这项研究提供了有关 2010 年至 2021 年约旦抗菌药物敏感性的宝贵信息。继续监测体外抗菌药敏感性对抗击抗菌药耐药性至关重要。
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引用次数: 0
Genomic modifications for enhanced antibiotic production in rifamycin derivative-producing Amycolatopsis mediterranei S699 strains: focusing on rifQ and rifO genes. 产利福霉素衍生物的地中海Amycolatopsis S699菌株增强抗生素生产的基因组修饰:聚焦于rifQ和rifO基因。
Pub Date : 2024-06-24 eCollection Date: 2024-01-01 DOI: 10.3389/frabi.2024.1399139
Moritz Müller, Elena Bialas, Irina Sturm, Utkarsh Sood, Rup Lal, Andreas Bechthold

Rifamycin and its derivatives are natural products that belong to the class of antibiotic-active polyketides and have significant therapeutic relevance within the therapy scheme of tuberculosis, a worldwide infectious disease caused by Mycobacterium tuberculosis. Improving the oral bioavailability of rifamycin B was achieved through semisynthetic modifications, leading to clinically effective derivatives such as rifampicin. Genetic manipulation of the rifamycin polyketide synthase gene cluster responsible for the production of rifamycin B in the Amycolatopsis mediterranei strain S699 represents a promising tool to generate new rifamycins. These new rifamycins have the potential to be further derivatized into new, ideally more effective, clinically usable compounds. However, the resulting genetically engineered strains only produce these new derivatives in low yields. One example is the strain DCO36, in which rifAT6 was replaced by rapAT2, resulting in the production of rifamycin B and the new derivative 24-desmethyl rifamycin B. Here we describe the successful method adaptation of the PCR-targeting Streptomyces gene replacement approach to Amycolatopsis mediterranei S699 and further on the implementation of genetic modifications that enable an increased production of the derivative 24-desmethyl rifamycin B in the mutant strain DCO36. The described genetic modifications resulted in a mutant strain of DCO36 with rifQ deletion showing a 62% increase in 24-desmethyl rifamycin B production, while a mutant with rifO overexpression showed a 27% increase.

利福霉素及其衍生物是属于抗生素活性聚酮类的天然产物,在结核病的治疗方案中具有重要的治疗意义,结核病是由结核分枝杆菌引起的一种世界性传染病。通过半合成修饰提高了利福霉素B的口服生物利用度,从而产生了临床有效的利福平衍生物。对地中海Amycolatopsis mediterranei菌株S699中负责生产利福霉素B的利福霉素多酮合成酶基因簇的遗传操作代表了产生新利福霉素的有前途的工具。这些新的利福霉素有潜力进一步衍生成新的,理想情况下更有效的,临床可用的化合物。然而,由此产生的基因工程菌株只能以低产量生产这些新的衍生物。其中一个例子是菌株DCO36,其中rapAT2取代了rifAT6,产生了利福霉素B和新的衍生物24-去甲酰基利福霉素B。这里我们描述了pcr靶向链霉菌基因替代方法在地中海Amycolatopsis mediterranei S699上的成功应用,以及进一步实施遗传修饰,使突变菌株DCO36中衍生物24-去甲酰基利福霉素B的产量增加。所描述的遗传修饰导致rifQ缺失的DCO36突变株的24-去甲利福霉素B产量增加62%,而rifO过表达的突变株的产量增加27%。
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引用次数: 0
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Frontiers in antibiotics
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