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Antimicrobial resistance in fish and poultry: Public health implications for animal source food production in Nigeria, Egypt, and South Africa 鱼类和家禽的抗菌素耐药性:尼日利亚、埃及和南非动物源食品生产的公共卫生影响
Pub Date : 2022-11-10 DOI: 10.3389/frabi.2022.1043302
E. M. Okon, R. Okocha, B. Adesina, Judith O. Ehigie, O. Alabi, A. M. Bolanle, N. Matekwe, B. M. Falana, A. M. Tiamiyu, I. O. Olatoye, O. Adedeji
Antimicrobial resistance (AMR) is a significant threat to global public health. Specifically, excessive usage of antimicrobials in food animal production is one significant reason for AMR development in humans. Therefore, it is essential to identify the trends of AMR in fish and poultry and develop better surveillance strategies for the future. Despite this imperative need, such information is not well documented, especially in Africa. This study used a systematic review to assess AMR trend, spatial distribution, and incidence in fish and poultry research in Nigeria, Egypt, and South Africa. A literature assessment was conducted for published studies on AMR between 1989 and 2021 using the Scopus and Web of Science databases. One hundred and seventy-three relevant articles were obtained from the database search. Egypt was the leading exponent of antimicrobial resistance research (43.35%, 75 studies), followed by Nigeria (39.31%, 68 studies), then South Africa (17.34%, 30 studies). The majority of the antimicrobial resistance studies were on poultry in Egypt (81%, 61 studies), Nigeria (87%, 59 studies), and South Africa (80%, 24 studies). Studies on fish were 17% (13 studies), 9% (6 studies), and 10% (3 studies) in Egypt, Nigeria, and South Africa, respectively. Antimicrobial resistance patterns showed multiple drug resistance and variations in resistant genes. AMR research focused on sulfamethoxazole groups, chloramphenicol, trimethoprim, tetracycline, erythromycin, and ampicillin. Most studies employed the disk diffusion method for antimicrobial susceptibility tests. Among the four mechanisms of AMR, limiting drug uptake was the most reported in this study (both in fish and poultry). The findings reveal public and environmental health threats and suggest that it would be useful to promote and advance AMR research, particularly for countries on the global hotspot for antimicrobial use.
抗微生物药物耐药性(AMR)是对全球公共卫生的重大威胁。具体而言,在食用动物生产中过度使用抗菌剂是导致人类抗菌素耐药性发展的一个重要原因。因此,必须确定鱼类和家禽中抗菌素耐药性的趋势,并为未来制定更好的监测战略。尽管有这种迫切需要,但这方面的资料没有很好的记录,特别是在非洲。本研究采用系统综述的方法评估了尼日利亚、埃及和南非鱼类和家禽研究中的AMR趋势、空间分布和发病率。使用Scopus和Web of Science数据库对1989年至2021年间发表的AMR研究进行了文献评估。从数据库检索中获得173篇相关文章。埃及是抗菌药物耐药性研究的主要国家(43.35%,75项研究),其次是尼日利亚(39.31%,68项研究),然后是南非(17.34%,30项研究)。大多数抗菌素耐药性研究发生在埃及(81%,61项研究)、尼日利亚(87%,59项研究)和南非(80%,24项研究)的家禽身上。在埃及、尼日利亚和南非,对鱼类的研究分别为17%(13项研究)、9%(6项研究)和10%(3项研究)。耐药模式显示多重耐药和耐药基因的变异。抗菌素耐药性的研究重点是磺胺甲恶唑、氯霉素、甲氧苄啶、四环素、红霉素和氨苄西林。多数研究采用纸片扩散法进行药敏试验。在抗菌素耐药性的四种机制中,限制药物摄取是本研究中报道最多的(在鱼类和家禽中)。研究结果揭示了公共和环境健康威胁,并表明促进和推进抗菌素耐药性研究将是有益的,特别是对处于抗菌素使用全球热点的国家。
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引用次数: 0
Effects of age and pasture type on the concentration and prevalence of tetracycline and macrolide resistant Enterococcus species in beef cow-calf production system 年龄和牧场类型对肉牛-犊牛生产系统中四环素和大环内酯类耐药肠球菌浓度和流行率的影响
Pub Date : 2022-11-03 DOI: 10.3389/frabi.2022.1052316
G. Agga, H. Galloway, A. Netthisinghe
Enterococci are a normal flora of the gastrointestinal tracts of humans and animals. Enterococci can also cause life-threatening nosocomial infections. Antimicrobial-resistant Enterococcus species have been reported in the feedlot and dairy cattle productions and in meat and milk products, suggesting their foodborne importance. Cow-calf operations represent a significant segment in the beef production system by producing weaned calves. Weaned calves are brought into the feedlot to be finished for meat, and culled cows are also slaughtered for beef, primarily for ground beef products. Infection dynamics in the cow-calf operation can contribute to meat contamination. This study evaluated the effects of age and wheat grazing on the concentration and prevalence of a macrolide antibiotic erythromycin (ERYr) and tetracycline (TETr) resistant enterococci, associated resistance genes and species distribution in a cow-calf production system. In 2017 and 2018, 32 Angus breed cow-calf pairs were randomly assigned to feed on tall fescue or wheat pasture in two independent field experiments. During the grazing experiments of 2-3 weeks, fecal samples were collected weekly and cultured to enumerate, isolate and identify ERYr, TETr, and generic enterococci, using media supplemented with erythromycin, tetracycline or non-supplemented media, respectively. The two main species frequently associated with human illnesses, Enterococcus faecium and E. faecalis, were widely distributed in the cow-calf groups. Generic and TETr- enterococci were prevalent (96-100% prevalence) and abundant (3.2-4.9 log10 CFU/g) in the cow-calf population; however, ERYr enterococci were enumerable by direct plating only from a single cow despite being detected in at least 40% of the fecal samples after enrichment, showing their low abundance. TET- and ERY-resistance were mainly conferred by tet(M) and erm(B), respectively. Wheat grazing reduced the concentration of TETr enterococci and modified enterococcal species and resistance gene distributions. Hence, it is necessary to further investigate wheat grazing in cow-calf production as a potential strategy to mitigate antimicrobial resistance.
肠球菌是人类和动物胃肠道的一种正常菌群。肠球菌还可引起危及生命的医院感染。据报道,在饲养场和奶牛生产以及肉类和奶制品中发现了耐抗生素肠球菌,这表明它们具有食源性重要性。在生产断奶小牛的牛肉生产系统中,小牛业务是一个重要的部分。断奶的小牛被带到饲养场进行肉制品加工,被淘汰的奶牛也被屠宰用于牛肉,主要用于碎牛肉产品。在母牛犊牛操作中的感染动态可导致肉污染。本研究评估了年龄和小麦放牧对牛-小牛生产系统中大环内酯类抗生素红霉素(ERYr)和四环素(TETr)耐药肠球菌的浓度和流行、相关耐药基因和物种分布的影响。2017年和2018年,在两个独立的田间试验中,将32对安格斯品种牛犊牛随机分配到高羊茅或小麦牧场。在2-3周的放牧实验中,每周收集粪便样本进行培养,分别使用添加红霉素、四环素和未添加的培养基,对ERYr、TETr和通用肠球菌进行枚举、分离和鉴定。经常与人类疾病相关的两种主要物种,即粪肠球菌和粪肠球菌,广泛分布于母牛-小牛群中。普通肠球菌和TETr-肠球菌在犊牛群体中普遍存在(96-100%),数量丰富(3.2-4.9 log10 CFU/g);然而,尽管在富集后至少40%的粪便样本中检测到ERYr肠球菌,但通过直接电镀只能从一头奶牛中计数,显示出其低丰度。TET-和ery耐药主要分别由TET (M)和erm(B)引起。放牧小麦降低了TETr肠球菌的浓度,并改变了肠球菌的种类和抗性基因分布。因此,有必要进一步研究在犊牛生产中放牧小麦作为减轻抗微生物药物耐药性的潜在策略。
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引用次数: 1
Point prevalence survey to assess antibiotic prescribing pattern among hospitalized patients in a county referral hospital in Kenya 评估肯尼亚一家县转诊医院住院患者抗生素处方模式的点流行率调查
Pub Date : 2022-10-26 DOI: 10.3389/frabi.2022.993271
M. Kamita, Michael Maina, R. Kimani, R. Mwangi, D. Mureithi, Cynthia Nduta, J. Gitaka
Antibiotic resistance causes higher morbidity and mortality and higher healthcare costs. One of the factors influencing the emergence of antibiotic resistance is the inappropriate use of antibiotics. Clinical practitioners’ incorrect prescription patterns and a disregard for antibiotic usage recommendations are the leading causes of this resistance. This study examined the antibiotic prescription patterns among hospitalized patients at the Kiambu Level 5 hospital (KL5) to find potential for hospital quality improvement. This study was conducted in July 2021, and all patients hospitalized on the study day were included. The information was extracted from patient medical records using a World Health Organization Point Prevalence Survey (PPS) instrument. Anonymized data was gathered, entered, and then SPSS version 26 was used for analysis. Among the 308 surveyed patients, 191 (62%) received antibiotic medication, and 60.1% of the total were female. The pediatric ward, which had an antibiotic prescription rate of 94.1%, had the highest rate of antibiotic usage, followed by the medical ward (69.2%) and gynecological ward (65.6%). Over 40% of antibiotic prescriptions had a prophylactic medical indication. Penicillin G was the most prescribed antibiotic for community-acquired infections (32.2%), followed by 3rd generation cephalosporins (27.6%) and aminoglycosides (17.2%). Based on the AWaRe classification, 57% of the prescribed antibiotics were in the Access class while 42% were in the Watch class. Incomplete site of indication, lack of a method of administration, and length of administration are some of the conformities that were missing in the medical records. This study shows that antibiotic prescription rates are high, particularly for young patients, and there is a higher risk of antibiotic misuse. The data makes a compelling justification for using antibiotic stewardship practices in Kenyan hospitals.
抗生素耐药性会导致更高的发病率和死亡率以及更高的医疗费用。影响抗生素耐药性出现的因素之一是抗生素的不当使用。临床从业者不正确的处方模式和无视抗生素使用建议是导致这种耐药性的主要原因。这项研究调查了Kiambu五级医院(KL5)住院患者的抗生素处方模式,以寻找改善医院质量的潜力。这项研究于2021年7月进行,研究当天住院的所有患者都包括在内。该信息是使用世界卫生组织点流行率调查(PPS)仪器从患者医疗记录中提取的。收集并输入匿名数据,然后使用SPSS 26版进行分析。在308名接受调查的患者中,191名(62%)接受了抗生素治疗,其中60.1%为女性。儿科病房的抗生素处方率为94.1%,抗生素使用率最高,其次是内科病房(69.2%)和妇科病房(65.6%)。超过40%的抗生素处方具有预防性医学指征。青霉素G是社区获得性感染最常用的抗生素(32.2%),其次是第三代头孢菌素(27.6%)和氨基糖苷类抗生素(17.2%)。根据AWaRe分类,57%的处方抗生素属于Access类,42%属于Watch类。不完整的适应症部位、缺乏给药方法和给药时间是医疗记录中缺失的一些符合性。这项研究表明,抗生素处方率很高,尤其是对年轻患者,滥用抗生素的风险更高。这些数据为在肯尼亚医院使用抗生素管理做法提供了令人信服的理由。
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引用次数: 2
The synergistic interaction of systemic inflammation, dysbiosis and antimicrobial resistance promotes growth restriction in children with acute severe malnutrition: An emphasis on Escherichia coli 系统性炎症、生态失调和抗菌素耐药性的协同相互作用促进急性严重营养不良儿童的生长限制:重点是大肠杆菌
Pub Date : 2022-10-24 DOI: 10.3389/frabi.2022.1001717
René Arredondo-Hernández, C. Siebe, G. Castillo-Rojas, S. Ponce de León, Y. López-Vidal
A healthy development is denied to millions of children worldwide as harsh life conditions manifest themselves in an altered inflammation-prone microbiome crosstalk environment. Keynote of this tragedy is that insufficient nutritious amino acid blocks lipids-intake to sustain diverse microbiota, and promotes the generalist strategy followed by Escherichia coli -besides other proteobacteria- of shifting gut metabolism, subverting the site specificity of first immune reaction. Furthermore, it could be hypothesized that selective success lies in their ability to induce inflammation, since this phenomenon also fuels horizontal gene transfer (HGT). In this review, we dilucidate how immune mechanisms of environmental enteric dysfunction affect overgrowth restriction, infectious morbidity rate, and acquired lifelong risks among severe acute malnourished children. Also, despite acknowledging complexities of antimicrobial resistant enrichment, we explore and speculate over the links between virulence regulation and HGT as an indissociable part in the quest for new inflammatory niches by open genome bacteria, particularly when both collide in the most vulnerable.
全世界数百万儿童的健康发展被剥夺了,因为恶劣的生活条件表现在易发炎的微生物组串扰环境中。这场悲剧的主旨是,营养不足的氨基酸阻碍了脂质的摄入以维持不同的微生物群,并促进了大肠杆菌(以及其他蛋白细菌)所遵循的改变肠道代谢的通用策略,颠覆了第一免疫反应的位点特异性。此外,可以假设选择性成功在于它们诱导炎症的能力,因为这种现象也促进了水平基因转移(HGT)。在这篇综述中,我们阐明了环境肠道功能障碍的免疫机制如何影响严重急性营养不良儿童的过度生长限制、感染发病率和获得性终身风险。此外,尽管我们承认抗微生物耐药性富集的复杂性,但我们探索和推测了毒力调节和HGT之间的联系,这是开放基因组细菌寻找新的炎症小生境的一个不可分割的部分,尤其是当两者在最脆弱的人群中发生碰撞时。
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引用次数: 0
Probiotics beyond the farm: Benefits, costs, and considerations of using antibiotic alternatives in livestock 农场以外的益生菌:在牲畜中使用抗生素替代品的效益、成本和考虑
Pub Date : 2022-10-12 DOI: 10.3389/frabi.2022.1003912
Kyle R. Leistikow, Rachelle E. Beattie, K. Hristova
The increasing global expansion of antimicrobial resistant infections warrants the development of effective antibiotic alternative therapies, particularly for use in livestock production, an agricultural sector that is perceived to disproportionately contribute to the antimicrobial resistance (AMR) crisis by consuming nearly two-thirds of the global antibiotic supply. Probiotics and probiotic derived compounds are promising alternative therapies, and their successful use in disease prevention, treatment, and animal performance commands attention. However, insufficient or outdated probiotic screening techniques may unintentionally contribute to this crisis, and few longitudinal studies have been conducted to determine what role probiotics play in AMR dissemination in animal hosts and the surrounding environment. In this review, we briefly summarize the current literature regarding the efficacy, feasibility, and limitations of probiotics, including an evaluation of their impact on the animal microbiome and resistome and their potential to influence AMR in the environment. Probiotic application for livestock is often touted as an ideal alternative therapy that might reduce the need for antibiotic use in agriculture and the negative downstream impacts. However, as detailed in this review, limited research has been conducted linking probiotic usage with reductions in AMR in agricultural or natural environments. Additionally, we discuss the methods, including limitations, of current probiotic screening techniques across the globe, highlighting approaches aimed at reducing antibiotic usage and ensuring safe and effective probiotic mediated health outcomes. Based on this information, we propose economic and logistical considerations for bringing probiotic therapies to market including regulatory roadblocks, future innovations, and the significant gaps in knowledge requiring additional research to ensure probiotics are suitable long-term options for livestock producers as an antibiotic alternative therapy.
抗微生物耐药性感染在全球范围内的日益扩大,需要开发有效的抗生素替代疗法,特别是用于畜牧生产。畜牧生产是一个农业部门,消耗了全球近三分之二的抗生素供应,被认为对抗微生物耐药性危机的贡献过大。益生菌和益生菌衍生的化合物是有前景的替代疗法,它们在疾病预防、治疗和动物表现方面的成功应用值得关注。然而,益生菌筛查技术不足或过时可能无意中导致了这场危机,而且很少进行纵向研究来确定益生菌在动物宿主和周围环境中AMR传播中的作用。在这篇综述中,我们简要总结了当前关于益生菌的功效、可行性和局限性的文献,包括对其对动物微生物组和耐药性的影响及其影响环境中AMR的潜力的评估。益生菌在牲畜中的应用通常被吹捧为一种理想的替代疗法,可以减少农业中抗生素的使用需求和负面的下游影响。然而,如本综述所述,在农业或自然环境中,将益生菌的使用与AMR的减少联系起来的研究有限。此外,我们还讨论了目前全球益生菌筛查技术的方法,包括局限性,强调了旨在减少抗生素使用和确保安全有效的益生菌介导的健康结果的方法。基于这些信息,我们提出了将益生菌疗法推向市场的经济和后勤考虑因素,包括监管障碍、未来的创新以及需要额外研究的重大知识差距,以确保益生菌作为抗生素替代疗法适合牲畜生产商的长期选择。
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引用次数: 2
Grand challenge in antibiotic pharmacology: A major step toward tailored antimicrobial treatment in very complex clinical scenarios of infectious risk management 抗生素药理学的重大挑战:在感染风险管理的非常复杂的临床场景中,向量身定制的抗菌治疗迈出了重要一步
Pub Date : 2022-09-20 DOI: 10.3389/frabi.2022.1016760
F. Pea
COPYRIGHT © 2022 Pea. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. TYPE Specialty Grand Challenge PUBLISHED 20 September 2022 DOI 10.3389/frabi.2022.1016760
版权所有©2022豌豆。这是一篇根据知识共享署名许可(CC BY)条款发布的开放获取文章。根据公认的学术惯例,允许在其他论坛上使用、分发或复制,前提是原作者和版权所有人得到认可,并引用本期刊上的原始出版物。不允许使用、分发或复制不符合这些条款的内容。TYPE专业大挑战于2022年9月20日发布DOI 10.3389/frabi.2022.1016760
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引用次数: 0
A whole-genome assay identifies four principal gene functions that confer tolerance of meropenem stress upon Escherichia coli 一项全基因组测定确定了大肠杆菌耐受美罗培南胁迫的四个主要基因功能
Pub Date : 2022-09-16 DOI: 10.3389/frabi.2022.957942
Nicholas M. Thomson, A. Turner, M. Yasir, Sarah Bastkowski, M. Lott, M. Webber, Ian G. Charles
We report here the identification of four gene functions of principal importance for the tolerance of meropenem stress in Escherichia coli: cell division, cell envelope synthesis and maintenance, ATP metabolism, and transcription regulation. The primary mechanism of β-lactam antibiotics such as meropenem is inhibition of penicillin binding proteins, thus interfering with peptidoglycan crosslinking, weakening the cell envelope, and promoting cell lysis. However, recent systems biology approaches have revealed numerous downstream effects that are triggered by cell envelope damage and involve diverse cell processes. Subpopulations of persister cells can also arise, which can survive elevated concentrations of meropenem despite the absence of a specific resistance factor. We used Transposon-Directed Insertion Sequencing with inducible gene expression to simultaneously assay the effects of upregulation, downregulation, and disruption of every gene in a model E. coli strain on survival of exposure to four concentrations of meropenem. Automated Gene Functional Classification and manual categorization highlighted the importance at all meropenem concentrations of genes involved in peptidoglycan remodeling during cell division, suggesting that cell division is the primary function affected by meropenem. Genes involved in cell envelope synthesis and maintenance, ATP metabolism, and transcriptional regulation were generally important at higher meropenem concentrations, suggesting that these three functions are therefore secondary or downstream targets. Our analysis revealed the importance of multiple two-component signal transduction mechanisms, suggesting an as-yet unexplored coordinated transcriptional response to meropenem stress. The inclusion of an inducible, transposon-encoded promoter allowed sensitive detection of genes involved in proton transport, ATP production and tRNA synthesis, for which modulation of expression affects survival in the presence of meropenem: a finding that would not be possible with other technologies. We were also able to suggest new targets for future antibiotic development or for synergistic effects between gene or protein inhibitors and existing antibiotics. Overall, in a single massively parallel assay we were able to recapitulate many of the findings from decades of research into β-lactam antibiotics, add to the list of genes known to be important for meropenem tolerance, and categorize the four principal gene functions involved.
我们在此报告了大肠杆菌耐受美罗培南胁迫的四个重要基因功能的鉴定:细胞分裂、细胞包膜合成和维持、ATP代谢和转录调控。β-内酰胺类抗生素如美罗培南的主要作用机制是抑制青霉素结合蛋白,从而干扰肽聚糖交联,削弱细胞包膜,促进细胞裂解。然而,最近的系统生物学方法揭示了由细胞包膜损伤引发的许多下游效应,并涉及不同的细胞过程。也可能出现持久性细胞亚群,尽管缺乏特定的抗性因子,它们仍能在高浓度的美罗培南中存活。我们使用转座子定向插入测序(Transposon-Directed Insertion Sequencing)和诱导基因表达,同时测定了模型大肠杆菌菌株中每个基因的上调、下调和破坏对暴露于四种浓度的美罗培南后存活的影响。自动基因功能分类和人工分类强调了在所有美罗培南浓度下参与细胞分裂过程中肽聚糖重塑的基因的重要性,这表明细胞分裂是美罗培南影响的主要功能。参与细胞包膜合成和维持、ATP代谢和转录调控的基因在较高的美罗培南浓度下通常是重要的,这表明这三个功能因此是次要的或下游的目标。我们的分析揭示了多种双组分信号转导机制的重要性,表明对美罗培南胁迫的协调转录反应尚未被探索。包含一个可诱导的转座子编码启动子,可以灵敏地检测参与质子运输、ATP产生和tRNA合成的基因,在美罗培南存在的情况下,这些基因的表达调节影响生存:这是其他技术无法实现的发现。我们还能够为未来的抗生素开发或基因或蛋白质抑制剂与现有抗生素之间的协同作用提出新的靶点。总的来说,在一次大规模平行试验中,我们能够概括几十年来对β-内酰胺类抗生素研究的许多发现,添加到已知对美罗培南耐受性重要的基因列表中,并对涉及的四个主要基因功能进行分类。
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引用次数: 3
Implications of drug-induced phenotypical resistance: Is isoniazid radicalizing M. tuberculosis? 药物诱导表型耐药性的意义:异烟肼是否会激进化结核分枝杆菌?
Pub Date : 2022-09-09 DOI: 10.3389/frabi.2022.928365
R. Hammond, Frank Kloprogge, O. Pasqua, S. Gillespie
Background Tuberculosis treatment duration is long and does not guarantee eradication of infection. Shorter treatment regimens are a critical research objective to improve uptake and reduce the risk of relapse and bacterial resistance. The explanation for the need to continue treatment after patients are culture negative remains elusive. We have previously shown that the presence of lipid inclusions in mycobacterial cells is associated with an increase in antibiotic resistance. Aim We investigate the bactericidal effect of isoniazid and rifampicin on the expression of lipid inclusions and characterize the degree of the associated phenotypic antibiotic resistance to a range of anti-tuberculosis agents in current use. Methods Antibiotic killing effect for both M. tuberculosis and M. komossense were investigated by both hollow fiber bioreactor (HFS) studies and static time kill curve (STKC) experiments. Following STKC cultures were stained with resazurin, Sytox green and Nile red to establish their live/dead (resazurin positive/Sytox positive) and lipid inclusion status, respectively. In addition, M. komossense was studied in the hollow fiber bioreactor model (HFS) and exposed to isoniazid (H) and rifampicin (R). The MIC of current antituberculosis agents for cells from the treated hollow fiber experiments were tested. Results Antibiotic killing was similar for both species. For M. komossense; isoniazid was ineffective at the established MIC (1 mg/L) in the hollow fiber bioreactor but rifampicin reduced the viable count rapidly at MIC (0.4 mg/L). When the two drugs were combined at their respective MICs the killing effect was significant and greater than separately. Cells exposed to isoniazid (1x and 9x MIC) for 168 h showed considerable numbers of recoverable viable cells when compared with a combination of 1x MIC R & H where there were no viable cells detectable. For both drugs the number of lipid body positive cells increased over time and this effect was most pronounced for isoniazid and was associated with phenotypic resistance to multiple anti-tuberculosis drugs. Conclusion Our results showed that isoniazid is a potent stimulator of lipid body accumulation, culture persistence, and phenotypic resistance to multiple anti-tuberculosis drugs. These findings emphasize the importance of understanding mechanisms of drug-drug interactions and phenotypic resistance in regimen building.
结核病治疗持续时间长,并不能保证根除感染。较短的治疗方案是一个关键的研究目标,以提高吸收和减少复发和细菌耐药的风险。在患者培养阴性后需要继续治疗的原因仍然难以解释。我们之前已经表明,分枝杆菌细胞中脂质包裹体的存在与抗生素耐药性的增加有关。目的研究异烟肼和利福平对脂质包裹体表达的抑菌作用,并描述其对当前使用的一系列抗结核药物的相关表型耐药程度。方法采用中空纤维生物反应器(HFS)和静态时间杀伤曲线(STKC)试验研究抗生素对结核分枝杆菌和黑菌的杀伤效果。STKC培养物分别用resazurin、Sytox绿色和Nile红色染色,以确定其活/死(resazurin阳性/Sytox阳性)和脂质包涵状态。此外,在中空纤维生物反应器模型(HFS)中研究了M. komossense,并暴露于异烟肼(H)和利福平(R)中,检测了处理过的中空纤维细胞对当前抗结核药物的MIC。结果两种细菌的抗生素杀伤作用相似。对于M. komossense;异烟肼在中空纤维生物反应器中设定的MIC (1 mg/L)下无效,而利福平在MIC (0.4 mg/L)下迅速降低了活菌数。当两种药物在各自的mic合用时,杀伤效果显著且大于单独使用。暴露于异烟肼(1倍和9倍MIC) 168小时的细胞显示出相当数量的可恢复活细胞,与1倍MIC和9倍MIC的组合相比,没有检测到活细胞。对于这两种药物,脂质体阳性细胞的数量随着时间的推移而增加,这种影响在异烟肼中最为明显,并与对多种抗结核药物的表型耐药有关。结论异烟肼是一种有效的脂体积累、培养持久性和对多种抗结核药物表型耐药的刺激物。这些发现强调了了解药物-药物相互作用机制和表型耐药在方案构建中的重要性。
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引用次数: 2
Epidemiology of extended-spectrum beta-lactamase producing Enterobacteriaceae in Qatar: A 3-year hospital-based study 卡塔尔产广谱β -内酰胺酶肠杆菌科的流行病学:一项为期3年的医院研究
Pub Date : 2022-09-07 DOI: 10.3389/frabi.2022.980686
M. Alsamawi, Anwar I. Joudeh, Yaseer Eldeeb, Ayman Al-Dahshan, F. Khan, W. Ghadban, M. Almaslamani, A. Alkhal
Background The incidence of ESBL infections is exponentially increasing with variable prevalence among geographical areas and treatment settings. Identifying local prevalence rate and patient-related factors will help in earlier recognition and initiation of appropriate antibiotics treatment of patients with ESBL infections. Methods Retrospective analysis of all positive cultures for ESBL producing Enterobacteriaceae collected in Al-Khor hospital from January 2010 to December 2012. ESBL bacterial isolates reported as cephalosporin-resistant or ESBL using the automated VITEK Gram-Negative Susceptibility System with cards GNS 206 and 121 were screened for ESBL detection using the disk diffusion method in keeping with the Clinical and Laboratory Standards Institute. Both descriptive and analytic statistics were applied when appropriate, and univariate analysis was used to identify significant factors. Results Most of the ESBL-producing bacterial isolates were E. coli, which were also resistant to other classes of antimicrobials. Meropenem, amikacin and nitrofurantoin retained good coverage to most isolates. Klebsiella pneumonia infection was most likely associated with diabetes mellitus (p = 0.004), hospital-acquired infection (p = 0.046) and with more severe infection (p = 0.006). ESBL associated hospital-acquired infections were more likely to occur in older patients, those with comorbidities and with invasive device use. ESBL-associated urinary tract infections were most commonly community-acquired while ESBL associated respiratory tract infections were acquired from hospitals (p = < 0.001). Factors associated with mortality include treatment in the ICU (OR 104.8 [9.82–1116.96] p < 0.001), sepsis/septic shock (OR 20.80 (5.68–76.12) p < 0.001), hospital-acquired infections (OR 8.80 [1.88–41.16] p = 0.006) and bacteremia (OR 8.80 [1.63–47.5] p = 0.013). Conclusion Multiple risk factors were associated with ESBL infections both in the community and hospital setting. Prediction tools are needed to improve the protocol of appropriate empiric antibiotic selection while preserving antimicrobial stewardship recommendations.
背景ESBL感染的发生率随着地理区域和治疗环境的不同而呈指数级增长。确定局部流行率和患者相关因素将有助于早期识别和开始对ESBL感染患者进行适当的抗生素治疗。方法回顾性分析2010年1月至2012年12月在Al Khor医院收集的所有产ESBL肠杆菌科阳性培养物。根据临床和实验室标准研究所的要求,使用带有卡片GNS 206和121的自动VITEK革兰氏阴性易感性系统对报告为头孢菌素耐药性或ESBL的ESBL细菌分离株进行ESBL检测的圆盘扩散法筛选。在适当的情况下,使用描述性和分析统计学,并使用单变量分析来确定重要因素。结果ESBL产生菌以大肠杆菌为主,对其他种类的抗菌药物也有耐药性。美罗培南、阿米卡星和呋喃妥因对大多数分离株保持良好的覆盖率。克雷伯菌肺炎感染最有可能与糖尿病(p=0.004)、医院获得性感染(p=0.046)和更严重的感染(p=0.006)有关。ESBL相关的医院获得性传染更可能发生在老年患者、有合并症和使用侵入性器械的患者中。ESBL相关的尿路感染最常见于社区获得,而ESBL相关呼吸道感染是从医院获得的(p=0.001)。与死亡率相关的因素包括ICU治疗(OR 104.8[9.82–1116.96]p<0.001)、败血症/感染性休克(OR 20.80(5.68–76.12)p<0.001),医院获得性感染(OR 8.80[1.88–41.16]p=0.006)和菌血症(OR 8.80[1.63–47.5]p=0.013)。需要预测工具来改进适当的经验性抗生素选择方案,同时保留抗菌药物管理建议。
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引用次数: 3
Grand challenge of antibiotics resistance: A global, multidisciplinary effort is needed 抗生素耐药性的巨大挑战:需要全球多学科的努力
Pub Date : 2022-08-15 DOI: 10.3389/frabi.2022.984076
Jianping Xie
COPYRIGHT © 2022 Xie. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. Grand challenge of antibiotics resistance: A global, multidisciplinary e ort is needed
版权所有©2022谢。这是一篇根据知识共享署名许可(CC BY)条款发布的开放获取文章。根据公认的学术惯例,允许在其他论坛上使用、分发或复制,前提是原作者和版权所有人得到认可,并引用本期刊上的原始出版物。不允许使用、分发或复制不符合这些条款的内容。抗生素耐药性的巨大挑战:需要一个全球性的、多学科的研究
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引用次数: 1
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Frontiers in antibiotics
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