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Termination of figure-of-eight reentry via resonant feedback pacing. 通过共振反馈起搏终止8字形再入。
IF 3 Pub Date : 2025-11-19 eCollection Date: 2025-01-01 DOI: 10.3389/fnetp.2025.1692372
Navneet Roshan, Rupamanjari Majumder

Sudden cardiac death (SCD) is often precipitated by reentrant arrhythmias such as ventricular tachycardia (VT) and ventricular fibrillation (VF), whose underlying dynamics are frequently sustained by spiral waves of electrical activity. Disrupting these waves can restore normal rhythm, but conventional low-energy pacing strategies are often ineffective in VF, where high-frequency, multi-wave interactions dominate. Resonant feedback-controlled antitachycardia pacing (rF-ATP), which times global electrical stimuli based on real-time feedback from the tissue, has been shown to robustly terminate single spirals under diverse conditions. However, its impact on interacting spiral waves-arguably a more realistic substrate for life-threatening arrhythmias-remains unexplored. Here, we use numerical simulations to investigate the effect of rF-ATP on figure-of-eight reentry, a clinically relevant configuration consisting of two counter-rotating spirals. We show that rF-ATP consistently terminates this pattern, regardless of feedback point location, through two distinct dynamical pathways: mutual collision of phase singularities or annihilation at inexcitable boundaries. We further demonstrate the method's efficacy across variations in feedback point and spiral arrangement, indicating robustness to geometrical and positional heterogeneity. These results highlight rF-ATP as a promising low-energy intervention for complex reentrant structures and provide mechanistic insight into feedback-driven control of multi-core spiral wave dynamics in cardiac tissue.

心源性猝死(SCD)通常是由室性心动过速(VT)和心室颤动(VF)等再入性心律失常引起的,其潜在的动力学通常由电活动的螺旋波维持。干扰这些波可以恢复正常的心律,但传统的低能量起搏策略在室频中往往无效,其中高频多波相互作用占主导地位。共振反馈控制的抗心动过速起搏(rF-ATP)是一种基于组织实时反馈的全局电刺激计时技术,已被证明可以在多种条件下稳定地终止单螺旋。然而,它对相互作用的螺旋波(可能是危及生命的心律失常的更现实的基质)的影响仍未被探索。在这里,我们使用数值模拟来研究rF-ATP对8字形再入的影响,8字形再入是由两个反向旋转的螺旋组成的临床相关构型。研究表明,无论反馈点的位置如何,rF-ATP始终通过两种不同的动力学途径终止这种模式:相位奇点的相互碰撞或在不可激发边界处的湮灭。我们进一步证明了该方法在反馈点和螺旋排列变化中的有效性,表明了对几何和位置异质性的鲁棒性。这些结果突出了rF-ATP作为一种有前途的低能量干预复杂的可重入结构,并为心脏组织中多核螺旋波动力学的反馈驱动控制提供了机制见解。
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引用次数: 0
Analysing complex excitation patterns in cardiac tissue using wave event networks. 用波事件网络分析心脏组织的复杂兴奋模式。
IF 3 Pub Date : 2025-11-18 eCollection Date: 2025-01-01 DOI: 10.3389/fnetp.2025.1674919
Hans Friedrich Von Koeller, Alexander Schlemmer, Stefan Luther, Yannic Döring, Niels Voigt, Ulrich Parlitz

Cardiac dynamics is governed by complex electrical wave patterns, with disruptions leading to pathological conditions like atrial or ventricular fibrillation. Experimentally electrical excitation waves can be made visible by optical mapping using fluorescent dyes. While this imaging technique has enabled detailed studies of cardiac wave dynamics, the manual analysis of activation and phase maps often limits the ability to systematically identify and quantify wave patterns. This study employs a wave tracking algorithm that constructs a graph-based representation of wave dynamics. With that the algorithm detects key events such as wave emergence, splitting, and merging. Applied to both simulated cardiac tissue and experimental data from cell cultures, the algorithm identifies and quantifies wave patterns as wave event networks. Initial results demonstrate its utility in filtering for and focusing on dominant dynamics, providing a robust tool for analyzing cardiac wave patterns. This approach offers potential applications, e.g., to study the effects of external stimuli on cardiac excitation patterns and to better understand the mechanisms involved.

心脏动力学是由复杂的电波模式控制的,干扰会导致心房或心室颤动等病理状况。实验上,电激发波可以通过使用荧光染料的光学映射而可见。虽然这种成像技术可以对心波动力学进行详细的研究,但人工分析激活和相位图往往限制了系统识别和量化心波模式的能力。本研究采用了一种波浪跟踪算法,该算法构建了基于图形的波浪动力学表示。该算法检测关键事件,如波的出现,分裂和合并。该算法应用于模拟心脏组织和细胞培养的实验数据,识别并量化波事件网络的波模式。初步结果表明,它在过滤和关注主导动力学方面的效用,为分析心波模式提供了一个强大的工具。这种方法提供了潜在的应用,例如,研究外部刺激对心脏兴奋模式的影响,并更好地了解所涉及的机制。
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引用次数: 0
Metastability in the mixing/demixing of two species with reciprocally concentration-dependent diffusivity. 具有浓度依赖扩散系数的两种物质混合/分离的亚稳态。
IF 3 Pub Date : 2025-11-17 eCollection Date: 2025-01-01 DOI: 10.3389/fnetp.2025.1612495
Alexander B Neiman, Xiaochen Dong, Benjamin Lindner

It has been shown before that two species of diffusing particles can separate from each other by the mechanism of reciprocally concentration-dependent diffusivity: the presence of one species amplifies the diffusion coefficient of the respective other one, causing the two densities of particles to separate spontaneously. In a minimal model, this could be observed with a quadratic dependence of the diffusion coefficient on the density of the other species. Here, we consider a more realistic sigmoidal dependence as a logistic function on the other particle's density averaged over a finite sensing radius. The sigmoidal dependence accounts for the saturation effects of the diffusion coefficients, which cannot grow without bounds. We show that sigmoidal (logistic) cross-diffusion leads to a new regime in which a homogeneous disordered (well-mixed) state and a spontaneously separated ordered (demixed) state coexist, forming two long-lived metastable configurations. In systems with a finite number of particles, random fluctuations induce repeated transitions between these two states. By tracking an order parameter that distinguishes mixed from demixed phases, we measure the corresponding mean residence in each state and demonstrate that one lifetime increases and the other decreases as the logistic coupling parameter is varied. The system thus displays typical features of a first-order phase transition, including hysteresis for large particle numbers. In addition, we compute the correlation time of the order parameter and show that it exhibits a pronounced maximum within the bistable parameter range, growing exponentially with the total particle number.

以前已经证明,两种扩散粒子可以通过浓度依赖的扩散系数相互分离:一种粒子的存在放大了另一种粒子的扩散系数,导致两种密度的粒子自发分离。在最小模型中,这可以用扩散系数对其他物种密度的二次依赖来观察。在这里,我们考虑一个更现实的s型依赖,作为一个逻辑函数对其他粒子的密度平均在有限的传感半径。s型依赖关系解释了扩散系数的饱和效应,扩散系数不能无界增长。我们证明了s型交叉扩散导致了一种新的状态,在这种状态下,均匀无序(良好混合)状态和自发分离的有序(去混合)状态共存,形成了两种长寿命的亚稳态构型。在粒子数量有限的系统中,随机波动会导致这两种状态之间的反复转变。通过跟踪区分混合相和非混合相的顺序参数,我们测量了每个状态下相应的平均驻留时间,并证明了随着逻辑耦合参数的变化,一个寿命增加,另一个寿命减少。因此,该系统显示了一阶相变的典型特征,包括大粒子数的滞后。此外,我们计算了序参量的相关时间,并表明它在双稳态参数范围内表现出明显的最大值,随着总粒子数的增加呈指数增长。
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引用次数: 0
The precision principle: driving biological self-organization. 精确原理:驱动生物自组织。
IF 3 Pub Date : 2025-11-12 eCollection Date: 2025-01-01 DOI: 10.3389/fnetp.2025.1678473
Raymond Roy, Kiranpreet Sidhu, Gabriel Byczynski, Amedeo D'Angiulli, Birgitta Dresp-Langley

In this perspective, we introduce the Precision Principle as a unifying theoretical framework to explain self-organization across biological systems. Drawing from neurobiology, systems theory, and computational modeling, we propose that precision, understood as constraint-driven coherence, is the key force shaping the architecture, function, and evolution of nervous systems. We identify three interrelated domains: Structural Precision (efficient, modular wiring), Functional Precision (adaptive, context-sensitive circuit deployment), and Evolutionary Precision (selection-guided architectural refinement). Each domain is grounded in local operations such as spatial and temporal averaging, multiplicative co-activation, and threshold gating, which enable biological systems to achieve robust organization without centralized control. Within this framework, we introduce the Precision Coefficient, P z = C z - α R z , which formalizes the balance between network coherence and resource cost and serves as a simple quantitative outline of the principle. Conceptually, this formalism aligns with established learning mechanisms: Hebbian reinforcement provides the local substrate for weight changes, while winner-take-all and k-winners competition selectively eliminates weaker synapses, together increasing C z and reducing redundancy within R z . Rather than framing the theory in opposition to existing models, we aim to establish the Precision Principle as an original, integrative lens for understanding how systems sustain efficiency, flexibility, and resilience. We hope the framework inspires new research into neural plasticity, development, and artificial systems, by centering internal coherence, not prediction or control, as the primary driver of self-organizing intelligence.

从这个角度来看,我们引入精确原理作为一个统一的理论框架来解释生物系统的自组织。从神经生物学、系统理论和计算建模中,我们提出精确度,理解为约束驱动的一致性,是塑造神经系统结构、功能和进化的关键力量。我们确定了三个相互关联的领域:结构精度(高效、模块化布线)、功能精度(自适应、上下文敏感的电路部署)和进化精度(选择引导的架构优化)。每个域都以局部操作为基础,如空间和时间平均、乘法共激活和阈值门控,这些操作使生物系统能够在没有集中控制的情况下实现健壮的组织。在此框架内,我们引入了精度系数P z = C z - α R z,它形式化了网络一致性和资源成本之间的平衡,并作为原理的简单定量轮廓。从概念上讲,这种形式主义与已建立的学习机制相一致:Hebbian强化为权重变化提供了局部基础,而赢家通吃和k-赢家竞争选择性地消除了较弱的突触,共同增加了cz并减少了rz内的冗余。我们的目标不是建立与现有模型相反的理论,而是将精确度原则作为理解系统如何保持效率、灵活性和弹性的原始的、综合的视角。我们希望通过将内部一致性(而不是预测或控制)作为自组织智能的主要驱动因素,该框架能够激发对神经可塑性、发育和人工系统的新研究。
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引用次数: 0
Case Report: network physiology markers of inter-muscular interactions indicate reversal of age decline with exercise training. 病例报告:肌肉间相互作用的网络生理标记表明运动训练可以逆转年龄下降。
IF 3 Pub Date : 2025-11-07 eCollection Date: 2025-01-01 DOI: 10.3389/fnetp.2025.1686723
Sergi Garcia-Retortillo, Óscar Abenza, Ladda Thiamwong, Rui Xie, Michelle Gordon, Plamen Ch Ivanov, Tina E Brinkley

Aging is associated with a decline in inter-muscular coordination and overall functional capacity. While the benefits of exercise on individual physiological systems are well established, it remains unclear whether regular training can also enhance inter-muscular network interactions and counteract age-related decline. Using a Network Physiology approach, this Case Report investigates the effects of a home-based exercise program on inter-muscular coordination in two older adults. Two older adults (aged 69 and 73) completed a 12-week program that included twice-weekly virtual group sessions, and one weekly session of moderate-intensity aerobic exercise (30 min). Before and after the intervention, participants underwent a maximal cardiopulmonary exercise test (CPET) on a motorized treadmill. During the CPET, surface electromyography (EMG) was recorded from the left and right rectus femoris and biceps femoris. Inter-muscular coordination was quantified using the Amplitude-Amplitude Cross-Frequency Coupling (ACFC) method. Ten time series of EMG band power were extracted for each muscle, representing distinct neuromuscular processes. Pearson's cross-correlation was then computed for each pair of EMG band power time series across all muscles. Pre-Intervention, both participants showed low overall link strength across all sub-networks. Post-Intervention, there was a pronounced (∼400%) increase in average link strength across all sub-networks in both participants, primarily reflecting enhanced synchronization between distinct frequency bands across the rectus femoris and biceps femoris. These preliminary findings suggest that structured exercise may enhance inter-muscular network coordination in older adults. ACFC-derived network measures offer a promising tool for detecting early age-related decline and evaluating neuromuscular adaptations to exercise interventions.

衰老与肌肉间协调能力和整体功能能力的下降有关。虽然运动对个人生理系统的好处已经得到了很好的证实,但定期训练是否也能增强肌肉间网络的相互作用,并抵消与年龄相关的衰退,目前还不清楚。使用网络生理学方法,本病例报告调查了两名老年人的家庭运动计划对肌肉间协调的影响。两名年龄分别为69岁和73岁的老年人完成了一项为期12周的计划,其中包括每周两次的虚拟小组会议和每周一次的中等强度有氧运动(30分钟)。在干预前后,参与者在电动跑步机上进行了最大心肺运动测试(CPET)。在CPET期间,从左右股直肌和股二头肌记录表面肌电图(EMG)。肌间协调性采用幅幅交叉频率耦合(ACFC)方法进行量化。每个肌肉提取10个时间序列的肌电带功率,代表不同的神经肌肉过程。然后计算所有肌肉的每对肌电带功率时间序列的Pearson互相关。干预前,两个参与者在所有子网络中都表现出较低的整体链接强度。干预后,两名参与者所有子网络的平均连接强度显著(~ 400%)增加,主要反映了股直肌和股二头肌不同频段之间的同步增强。这些初步发现表明,有组织的锻炼可以增强老年人肌肉间网络的协调。acfc衍生的网络测量为检测早期年龄相关的衰退和评估神经肌肉对运动干预的适应性提供了一个有前途的工具。
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引用次数: 0
Population coding and self-organized ring attractors in recurrent neural networks for continuous variable integration. 连续变量积分递归神经网络中的种群编码和自组织环吸引子。
IF 3 Pub Date : 2025-10-31 eCollection Date: 2025-01-01 DOI: 10.3389/fnetp.2025.1693772
Roman Kononov, Vasilii Tiselko, Oleg Maslennikov, Vladimir Nekorkin

Representing and integrating continuous variables is a fundamental capability of the brain, often relying on ring attractor circuits that maintain a persistent bump of activity. To investigate how such structures can self-organize, we trained a recurrent neural network (RNN) on a ring-based path integration task using population-coded velocity inputs. The network autonomously developed a modular architecture: one subpopulation formed a stable ring attractor to maintain the integrated position, while a second, distinct subpopulation organized into a dissipative control unit that translates velocity into directional signals. Furthermore, systematic perturbations revealed that the precise topological alignment between these modules is essential for reliable integration. Our findings illustrate how functional specialization and biologically plausible representations can emerge from a general learning objective, offering insights into neural self-organization and providing a framework for designing more interpretable and robust neuromorphic systems for navigation and control.

表示和积分连续变量是大脑的一项基本能力,通常依赖于维持持续活动的环形吸引电路。为了研究这种结构如何自组织,我们使用人口编码的速度输入在基于环的路径集成任务上训练了一个循环神经网络(RNN)。该网络自主开发了一个模块化架构:一个子群形成了一个稳定的环形吸引子来保持整体位置,而另一个不同的子群组织成一个耗散控制单元,将速度转换为方向信号。此外,系统扰动表明,这些模块之间的精确拓扑对齐对于可靠集成至关重要。我们的研究结果说明了功能专业化和生物学上合理的表征是如何从一般的学习目标中产生的,为神经自组织提供了见解,并为设计更具可解释性和鲁棒性的导航和控制神经形态系统提供了框架。
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引用次数: 0
A Q-analysis package for higher-order interactions analysis in Python and its application in network physiology. Python中用于高阶交互分析的q分析包及其在网络生理学中的应用。
IF 3 Pub Date : 2025-10-29 eCollection Date: 2025-01-01 DOI: 10.3389/fnetp.2025.1691159
Nikita Smirnov, Semen Kurkin, Alexander E Hramov

Introduction: Real-world networks possess complex, higher-order structures that are not captured by traditional pairwise analysis methods. Q-analysis provides a powerful mathematical framework based on simplicial complexes to uncover and quantify these multi-node interactions. However, its adoption has been limited by a lack of accessible software tools.

Methods: We introduce a comprehensive Python package that implements the core methodology of Q-analysis. The package enables the construction of simplicial complexes from graphs or simplex lists and computes a suite of descriptive metrics, including structure vectors (FSV, SSV, TSV) and topological entropy. It features high-performance routines, integration with scikit-learn for machine learning workflows, and tools for statistical inference, such as permutation tests.

Results: We demonstrate the package's capabilities through a simulation study, revealing distinct higher-order topological signatures in scale-free versus configurational networks despite identical degree distributions. Application to the DBLP co-authorship dataset uncovered the evolution of collaborative structures over three decades, showing increased collaboration scale and shifts in higher-order connectivity patterns. Finally, in a network physiology application, the package identified significant disruptions in the higher-order organization of fMRI-derived brain networks in Major Depressive Disorder (MDD), characterized by a loss of high-dimensional functional components and increased fragmentation.

Discussion: The developed package makes Q-analysis accessible to a broad research audience, facilitating the exploration of higher-order interactions in complex systems. The presented applications validate its utility across diverse domains, from social networks to neuroscience. By providing an open-source tool, this work bridges a gap in network science, enabling quantitative analysis of the intricate, multi-node structures that define real-world networks.

引言:现实世界的网络具有复杂的高阶结构,传统的两两分析方法无法捕获这些结构。Q-analysis提供了一个基于简单复合体的强大数学框架来揭示和量化这些多节点交互。然而,由于缺乏可访问的软件工具,它的采用受到了限制。方法:我们介绍了一个全面的Python包,它实现了Q-analysis的核心方法。该软件包能够从图或单纯形表构建简单复合体,并计算一套描述性度量,包括结构向量(FSV, SSV, TSV)和拓扑熵。它具有高性能例程,集成了用于机器学习工作流的scikit-learn,以及用于统计推断(如排列测试)的工具。结果:我们通过模拟研究证明了该包的功能,尽管相同的度分布,但在无标度与配置网络中揭示了不同的高阶拓扑特征。对DBLP合著数据集的应用揭示了三十年来协作结构的演变,显示了协作规模的增加和高阶连接模式的转变。最后,在网络生理学应用中,该软件包确定了重度抑郁症(MDD)中fmri衍生的大脑网络的高阶组织的显著中断,其特征是高维功能成分的丧失和碎片化的增加。讨论:开发的软件包使q分析对广泛的研究受众易于访问,促进了复杂系统中高阶相互作用的探索。所提出的应用程序验证了它在不同领域的实用性,从社交网络到神经科学。通过提供一个开源工具,这项工作填补了网络科学的空白,能够对定义现实世界网络的复杂的多节点结构进行定量分析。
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引用次数: 0
Synaptic facilitation and learning of multiplexed neural signals. 突触易化与多路神经信号的学习。
IF 3 Pub Date : 2025-10-23 eCollection Date: 2025-01-01 DOI: 10.3389/fnetp.2025.1664280
Nigel Crook, Alexander D Rast, Eleni Elia, Mario Antoine Aoun

Introduction: In this work, we introduce a novel approach to one of the historically fundamental questions in neural networks: how to encode information? More particularly, we look at temporal coding in spiking networks, where the timing of a spike as opposed to the frequency, determines the information content. In contrast to previous temporal-coding schemes, which rely on the statistical properties of populations of neurons and connections, we employ a novel synaptic plasticity mechanism that allows the timing to be learnt at the single-synapse level.

Methods: Using a formal basis from information theory, we show how a phase-coded spike train (relative to some 'reference' phase) can, in fact, multiplex multiple different information signals onto the same spike train, significantly improving overall information capacity. We furthermore derive limits on the channel capacity in the phase-coded spiking case, and show that the learning rule also has a continuous derivative in the input-output relation, making it potentially amenable to classical learning rules from artificial neural networks such as backpropagation.

Results: Using a simple demonstration network, we show the multiplexing of different signals onto the same connection, and demonstrate that different synapses indeed can adapt using this learning rule, to specialise to different interspike intervals (i.e., phase relationships). The overall approach allows for denser encoding, and thus energy efficiency, in neural networks for complex tasks, allowing smaller and more compact networks to achieve combinations of tasks which traditionally would have required high-dimensional embeddings.

Discussion: Although carried out as a study in computational spiking neural networks, the results may have insights for functional neuroscience, and suggest links to mechanisms that have been shown from neuroscientific studies to support temporal coding. To the best of our knowledge, this is the first study to solve one of the outstanding problems in spiking neural networks: to demonstrate that distinct temporal codings can be distinguished through synaptic learning.

在这项工作中,我们引入了一种新颖的方法来解决神经网络中历史上最基本的问题之一:如何编码信息?更具体地说,我们研究了尖峰网络中的时间编码,其中尖峰的时间而不是频率决定了信息的内容。与之前依赖于神经元群体和连接的统计特性的时间编码方案不同,我们采用了一种新的突触可塑性机制,允许在单个突触水平上学习时间。方法:使用信息论的形式化基础,我们展示了相位编码尖峰序列(相对于某些“参考”相位)实际上如何将多个不同的信息信号复用到同一尖峰序列上,从而显着提高整体信息容量。我们进一步推导了相位编码尖峰情况下信道容量的限制,并表明学习规则在输入输出关系中也具有连续导数,使其潜在地适用于人工神经网络(如反向传播)的经典学习规则。结果:使用一个简单的演示网络,我们展示了不同信号在同一连接上的多路复用,并证明不同的突触确实可以使用这种学习规则来适应不同的峰间间隔(即相位关系)。整体方法允许更密集的编码,从而提高能量效率,在复杂任务的神经网络中,允许更小、更紧凑的网络实现传统上需要高维嵌入的任务组合。讨论:虽然是作为一项计算尖峰神经网络的研究进行的,但结果可能对功能神经科学有启示,并表明与神经科学研究显示的支持时间编码的机制有关。据我们所知,这是第一个解决尖峰神经网络中一个突出问题的研究:证明不同的时间编码可以通过突触学习来区分。
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引用次数: 0
Magnitude-constrained optimal chaotic desynchronization of neural populations. 神经群的数量级约束最优混沌去同步。
IF 3 Pub Date : 2025-10-21 eCollection Date: 2025-01-01 DOI: 10.3389/fnetp.2025.1646391
Michael Zimet, Faranak Rajabi, Jeff Moehlis

In this paper, we calculate magnitude-constrained optimal stimuli for desynchronizing a population of neurons by maximizing the Lyapunov exponent for the phase difference between pairs of neurons while simultaneously minimizing the energy which is used. This theoretical result informs the way optimal inputs can be designed for deep brain stimulation in cases where there is a biological or electronic constraint on the amount of current that can be applied. By exploring a range of parameter values, we characterize how the constraint magnitude affects the Lyapunov exponent and energy usage. Finally, we demonstrate the efficacy of this approach by considering a computational model for a population of neurons with repeated event-triggered optimal inputs.

在本文中,我们通过最大化神经元对之间的相位差的Lyapunov指数,同时最小化所使用的能量,来计算大小约束的最优刺激,以使神经元群体去同步。这一理论结果告诉我们,在有生物或电子限制的情况下,可以为深部脑刺激设计最佳输入。通过探索一系列参数值,我们描述了约束大小如何影响李雅普诺夫指数和能源使用。最后,我们通过考虑具有重复事件触发的最优输入的神经元群体的计算模型来证明这种方法的有效性。
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引用次数: 0
Self-organized integration vs. self-organized disintegration: an unfinished study. 自组织整合与自组织瓦解:一项未完成的研究。
IF 3 Pub Date : 2025-10-20 eCollection Date: 2025-01-01 DOI: 10.3389/fnetp.2025.1662127
Juval Portugali

This paper refers to an issue Haken and myself were discussing, started to work on, prepared a preliminary draft, but never managed to complete and transform it into a full-scale study and publication. Here, in memoriam of Hermann Haken, my dear friend and colleague for many years, I present it as it is - an unfinished study with some innovative ideas that will have to be further elaborated in the future.

这篇论文是我和Haken讨论的一个问题,开始着手,准备了一个初稿,但一直没有完成并转化为一个全面的研究和发表。在这里,为了纪念赫尔曼·哈肯,我多年来的好朋友和同事,我把它原原本本地呈现出来——一份未完成的研究报告,其中有一些创新的想法,将来必须进一步阐述。
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Frontiers in network physiology
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