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Navigating the meta-crisis of generativity: adapting qualitative research quality criteria in the era of generative AI. 引导生成的元危机:在生成人工智能时代适应定性研究的质量标准。
IF 1.6 Pub Date : 2025-11-04 eCollection Date: 2025-01-01 DOI: 10.3389/frma.2025.1685968
Niroj Dahal, Md Kamrul Hasan, Amine Ounissi, Md Nurul Haque, Hiralal Kapar

Integrating generative AI (GenAI) in qualitative research offers innovation but intensifies core epistemological, ontological, and ethical challenges. This article conceptualizes the meta-crisis of generativity-a convergence of Denzin and Lincoln's three crises: representation (blurring human/AI authorship), legitimation (questioning trust in AI-generated claims), and praxis (ambiguity in non-human participation). We examine how human-GenAI collaboration challenges researchers' voice, knowledge validity, and ethical agency across research paradigms. To navigate this, we propose strategic approaches: preserving positionality via voice annotation and reflexive bracketing (representation); ensuring trustworthiness through algorithmic audits and adapted validity checklists (legitimation); and redefining agency via participatory transparency and posthuman ethics (praxis). Synthesizing these, we expand qualitative rigor criteria-such as credibility and reflexivity-into collaborative frameworks that emphasize algorithmic accountability. The meta-crisis is thus an invitation to reanimate the critical ethos of qualitative research through interdisciplinary collaboration, balancing the potential of GenAI with ethical accountability while preserving humanistic foundations.

将生成式人工智能(GenAI)整合到定性研究中提供了创新,但加剧了核心认识论、本体论和伦理挑战。本文将生成的元危机概念化——这是Denzin和Lincoln的三个危机的汇合:代表性(模糊人类/人工智能的作者身份),合法性(质疑人工智能生成的主张的信任)和实践(非人类参与的模糊性)。我们研究了人类-基因合作如何挑战研究人员的声音、知识有效性和跨研究范式的伦理代理。为了解决这个问题,我们提出了一些战略方法:通过语音注释和反身性括号法(表示)来保持位置性;通过算法审计和适应性有效性检查表(合法化)确保可信赖性;通过参与式透明和后人类伦理(实践)重新定义代理。综合这些,我们将定性的严格标准——如可信度和反身性——扩展到强调算法问责制的协作框架中。因此,元危机是一个邀请,通过跨学科合作重振定性研究的批判精神,在保留人文基础的同时,平衡GenAI的潜力和伦理责任。
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引用次数: 0
Sentiment analysis of research attention: the Altmetric proof of concept. 情感分析的研究重点:Altmetric概念的证明。
IF 1.6 Pub Date : 2025-10-31 eCollection Date: 2025-01-01 DOI: 10.3389/frma.2025.1612216
Carlos Areia, Michael Taylor, Miguel Garcia, Jonathan Hernandez

Traditional bibliometric approaches to research impact assessment have predominantly relied on citation counts, overlooking the qualitative dimensions of how research is received and discussed. Altmetrics have expanded this perspective by capturing mentions across diverse platforms, yet most analyses remain limited to quantitative measures, failing to account for sentiment. This study aimed to introduce a novel artificial intelligence-driven sentiment analysis framework designed to evaluate the tone and intent behind research mentions on social media, with a primary focus on X (formerly Twitter). Our approach leverages a bespoke sentiment classification system, spanning seven levels from strong negative to strong positive, to capture the nuanced ways in which research is endorsed, critiqued, or debated. Using a machine learning model trained on 5,732 manually curated labels (ML2024) as a baseline (F1 score = 0.419), we developed and refined a Large Language Model (LLM)-based classification system through three iterative rounds of expert evaluation. The final AI-driven model demonstrated improved alignment with human assessments, achieving an F1 score of 0.577, significantly enhancing precision and recall over traditional methods. These findings underscore the potential of advanced AI methodologies in altmetric analysis, offering a richer, more context-aware understanding of research reception. This study laid the foundation for integrating sentiment analysis into Altmetric platforms, providing researchers, institutions, and policymakers with deeper insights into the societal discourse surrounding scientific outputs.

研究影响评估的传统文献计量学方法主要依赖于引文计数,忽视了研究如何被接受和讨论的定性维度。Altmetrics通过捕捉不同平台上的提及次数来扩展这一视角,但大多数分析仍然局限于定量测量,未能考虑到情绪。本研究旨在引入一种新的人工智能驱动的情感分析框架,旨在评估社交媒体上研究提及背后的语气和意图,主要关注X(以前的Twitter)。我们的方法利用定制的情绪分类系统,从强烈的消极到强烈的积极跨越七个级别,以捕捉研究被认可、批评或辩论的微妙方式。使用5,732个人工管理标签(ML2024)训练的机器学习模型作为基线(F1分数= 0.419),我们通过三轮专家评估迭代开发并改进了基于大语言模型(LLM)的分类系统。最终的人工智能驱动模型与人类评估的一致性得到了改善,F1得分为0.577,比传统方法显著提高了精度和召回率。这些发现强调了先进的人工智能方法在替代分析中的潜力,为研究接受提供了更丰富、更情境感知的理解。该研究为将情感分析整合到Altmetric平台奠定了基础,为研究人员、机构和政策制定者提供了对围绕科学成果的社会话语的更深入了解。
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引用次数: 0
Does who responds matter?: exploring potential proxy response bias in the Washington Group Short Set disability estimates. 谁回应重要吗?:探索华盛顿小组短集残疾估计中潜在的代理反应偏差。
IF 1.6 Pub Date : 2025-10-30 eCollection Date: 2025-01-01 DOI: 10.3389/frma.2025.1654769
Aaron Beuoy, Kelsey S Goddard

Introduction: The Washington Group Short Set (WG-SS) is a widely used tool for identifying disability in national and international population-based surveys. However, results from cognitive testing revealed key differences in response patterns between individuals who self-report and those with a proxy respondent. Considering proxy reporting is frequently used in national surveys, discrepancies between reporting sources could affect the accuracy of disability prevalence estimates and have important implications for health equity and policy.

Methods: A binary logistic regression was conducted to examine the relationship between proxy respondents and WG-SS disability status after controlling for sociodemographic characteristics, using pooled data from the 2010-2018 National Health Interview Survey (NHIS).

Results: After controlling for sociodemographic characteristics, proxy respondents were 4.48 times more likely to be classified as having a WG-SS disability compared to those who self-reported.

Discussion: Differences in proxy reporting have real implications for equity, access, and policy accountability. If proxy reporting systematically increases the likelihood of disability classification, prevalence estimates may be distorted. This is especially problematic when proxies are more likely to report for populations already at risk of under- or overrepresentation in disability data, such as older adults, people with cognitive disabilities, and children and adolescents. Future studies using the WG-SS should treat the reporting source, i.e., proxy response, not as a procedural footnote, but as a central variable in assessing data quality and equity.

华盛顿小组短集(WG-SS)是在国家和国际人口调查中广泛使用的识别残疾的工具。然而,认知测试的结果揭示了自我报告的个体和代理受访者之间反应模式的关键差异。考虑到在国家调查中经常使用代理报告,报告来源之间的差异可能影响残疾患病率估计的准确性,并对卫生公平和政策产生重要影响。方法:采用2010-2018年全国健康访谈调查(NHIS)的汇总数据,在控制社会人口学特征后,采用二元logistic回归分析代理受访者与WG-SS残疾状况之间的关系。结果:在控制了社会人口学特征后,代理受访者被归类为WG-SS残疾的可能性是自我报告者的4.48倍。讨论:代理报告的差异对公平、获取和政策问责具有实际意义。如果代理报告系统地增加了残疾分类的可能性,患病率估计可能会被扭曲。当代理更有可能报告残疾数据中已经存在代表性不足或过高风险的人群(如老年人、认知残疾者、儿童和青少年)时,这一点尤其有问题。未来使用工作组- ss的研究应将报告来源,即代理反应,不作为程序脚注,而是作为评估数据质量和公平性的中心变量。
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引用次数: 0
A pilot study investigating the relationship between journal impact factor and methodological quality of real-world observational studies. 一项调查期刊影响因子与现实世界观察性研究方法学质量之间关系的初步研究。
IF 1.6 Pub Date : 2025-10-22 eCollection Date: 2025-01-01 DOI: 10.3389/frma.2025.1679842
Digant Gupta, Amandeep Kaur, Mansi Malik

Introduction: The primary objective of this study was to investigate the association between journal Impact Factor (IF) and study quality in real-world observational studies. The secondary objective was to explore whether the association changes as a function of different study factors (study design, funding type and geographic location).

Methods: Study quality was assessed using the Newcastle-Ottawa Scale (NOS). IFs were obtained from journal websites. The association between journal IF and NOS score was evaluated firstly using Spearman's correlation coefficient, and secondly using one-way Analysis of Variance (ANOVA).

Results: We selected 457 studies published in 208 journals across 11 consecutive systematic literature reviews (SLRs) conducted at our organization over the last 5 years. Most studies were cross-sectional and from North America or Europe. Mean (SD) NOS score was 6.6 (1.03) and mean (SD) IF was 5.2 (4.5). Overall, there was a weak positive correlation between NOS score and IF (Spearman's coefficient (ρ) = 0.23 [95% CI: 0.13-0.31]; p < 0.001). There was no correlation between NOS score and IF for prospective cohort studies (ρ = 0.07 [95% CI:-0.12-0.25]) and industry-funded studies (ρ = 0.06 [95% CI:-0.09-0.21]). Based on ANOVA, the effect size, eta squared (η2), was 0.04 (95% CI: 0.01-0.08), indicating a small effect.

Discussion: While there is some correlation between journal quality and study quality, our findings indicate that high-quality research can be found in journals with lower IF, and assessing study quality requires careful review of study design, methodology, analysis, interpretation, and significance of the findings. Notably, in industry-funded studies, no correlation was found between methodological quality and IF.

本研究的主要目的是调查现实世界观察性研究中期刊影响因子(IF)与研究质量之间的关系。次要目的是探讨这种关联是否会随着不同的研究因素(研究设计、资助类型和地理位置)而变化。方法:采用纽卡斯尔-渥太华量表(NOS)评价研究质量。影响因子从期刊网站获得。首先采用Spearman相关系数,其次采用单因素方差分析(ANOVA)评价期刊IF与NOS评分的相关性。结果:我们选择了在过去5年中在我们组织进行的11次连续系统文献综述(slr)中发表在208个期刊上的457项研究。大多数研究是横断面的,来自北美或欧洲。NOS平均(SD)评分为6.6 (1.03),IF平均(SD)评分为5.2(4.5)。总体而言,NOS评分与IF呈弱正相关(Spearman系数(ρ) = 0.23 [95% CI: 0.13-0.31];P < 0.001)。前瞻性队列研究(ρ = 0.07 [95% CI:-0.12-0.25])和行业资助研究(ρ = 0.06 [95% CI:-0.09-0.21])的NOS评分与IF之间无相关性。基于方差分析,效应大小,eta平方(η2)为0.04 (95% CI: 0.01-0.08),表明影响较小。讨论:虽然期刊质量和研究质量之间存在一定的相关性,但我们的研究结果表明,高质量的研究可以在影响因子较低的期刊中找到,评估研究质量需要仔细审查研究设计、方法、分析、解释和研究结果的重要性。值得注意的是,在行业资助的研究中,没有发现方法质量与影响因子之间的相关性。
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引用次数: 0
The intellectual base and research fronts of LGR5: a bibliometric analysis. LGR5的知识基础和研究前沿:文献计量学分析。
IF 1.6 Pub Date : 2025-10-21 eCollection Date: 2025-01-01 DOI: 10.3389/frma.2025.1644408
Rong Ding, Zemin Tang, Rong Xu, Zhiming Deng

Background: Leucine-rich repeat-containing G-protein-coupled receptor 5 (LGR5) is involved in canonical Wnt/β-catenin signaling and is a marker of stem cells in several tissues. It plays an important role in self-renewal, metastasis, and chemoresistance of tumors. The plasticity and potential of LGR5 (+) cancer stem cells could provide therapeutic targets for cancer. However, the data in this field is very limited and requires further investigation.

Methods: This study aimed to explore the status and evolutionary trends of LGR5 research using bibliometric analysis. In total, 2,187 publications were retrieved from the Web of Science Core Collection. The period covered by the articles was from 1999 to 2023. CiteSpace, VOSviewer, R software, and Bibliometric Online Analysis Platform were used for bibliometric analysis and visualization.

Results: The USA was the most productive country, with the highest centrality and largest single-country publications. The Netherlands was the earliest country to conduct LGR5 research. Cleavers, H from the Hubrecht Institute (KNAW) of the Netherlands was the most influential author as measured by H, G, and M-index values and contributions to the number of publications and citations. Intestinal stem cells were a hot topic, while keywords "LGR5 (+) stem cells," "inflammation," and "tumor microenvironment" exhibited the strongest burst in recent years, indicating a significant research focus in the future. Additionally, targeting LGR5 (+) stem cells in a specific phase of cancer and in combination with tumor microenvironment (TME) combination could be a future hotspot.

Conclusion: Research on LGR5 continues to develop through active global efforts. This study offers a comprehensive analysis of LGR5 using bibliometric and visual methods, highlighting current research hotspots and potential directions for researchers interested in the field.

背景:Leucine-rich repeat-containing G-protein-coupled receptor 5 (LGR5)参与典型的Wnt/β-catenin信号传导,是多种组织中干细胞的标志物。它在肿瘤的自我更新、转移和化疗耐药中起重要作用。LGR5(+)肿瘤干细胞的可塑性和潜力可为癌症的治疗提供靶点。然而,这一领域的数据非常有限,需要进一步调查。方法:采用文献计量学方法,探讨LGR5的研究现状及发展趋势。总共从Web of Science核心馆藏中检索到2187份出版物。文章所涵盖的时期为1999年至2023年。使用CiteSpace、VOSviewer、R软件和文献计量在线分析平台进行文献计量分析和可视化。结果:美国是生产力最高的国家,具有最高的中心性和最大的单一国家出版物。荷兰是最早进行LGR5研究的国家。荷兰Hubrecht研究所(KNAW)的Cleavers, H通过H、G和m指数值以及对出版物和引用的贡献来衡量,是最具影响力的作者。肠道干细胞是一个热门话题,其中“LGR5(+)干细胞”、“炎症”、“肿瘤微环境”等关键词近年来爆发最为强烈,是未来重要的研究热点。此外,针对癌症特定阶段的LGR5(+)干细胞并与肿瘤微环境(tumor microenvironment, TME)联合治疗可能是未来的研究热点。结论:在全球的积极努力下,LGR5的研究仍在继续发展。本研究采用文献计量学和可视化方法对LGR5进行了全面分析,为感兴趣的研究者突出了当前的研究热点和潜在的研究方向。
{"title":"The intellectual base and research fronts of LGR5: a bibliometric analysis.","authors":"Rong Ding, Zemin Tang, Rong Xu, Zhiming Deng","doi":"10.3389/frma.2025.1644408","DOIUrl":"10.3389/frma.2025.1644408","url":null,"abstract":"<p><strong>Background: </strong>Leucine-rich repeat-containing G-protein-coupled receptor 5 (LGR5) is involved in canonical Wnt/β-catenin signaling and is a marker of stem cells in several tissues. It plays an important role in self-renewal, metastasis, and chemoresistance of tumors. The plasticity and potential of LGR5 (+) cancer stem cells could provide therapeutic targets for cancer. However, the data in this field is very limited and requires further investigation.</p><p><strong>Methods: </strong>This study aimed to explore the status and evolutionary trends of LGR5 research using bibliometric analysis. In total, 2,187 publications were retrieved from the Web of Science Core Collection. The period covered by the articles was from 1999 to 2023. CiteSpace, VOSviewer, R software, and Bibliometric Online Analysis Platform were used for bibliometric analysis and visualization.</p><p><strong>Results: </strong>The USA was the most productive country, with the highest centrality and largest single-country publications. The Netherlands was the earliest country to conduct LGR5 research. Cleavers, H from the Hubrecht Institute (KNAW) of the Netherlands was the most influential author as measured by H, G, and M-index values and contributions to the number of publications and citations. Intestinal stem cells were a hot topic, while keywords \"LGR5 (+) stem cells,\" \"inflammation,\" and \"tumor microenvironment\" exhibited the strongest burst in recent years, indicating a significant research focus in the future. Additionally, targeting LGR5 (+) stem cells in a specific phase of cancer and in combination with tumor microenvironment (TME) combination could be a future hotspot.</p><p><strong>Conclusion: </strong>Research on LGR5 continues to develop through active global efforts. This study offers a comprehensive analysis of LGR5 using bibliometric and visual methods, highlighting current research hotspots and potential directions for researchers interested in the field.</p>","PeriodicalId":73104,"journal":{"name":"Frontiers in research metrics and analytics","volume":"10 ","pages":"1644408"},"PeriodicalIF":1.6,"publicationDate":"2025-10-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12583042/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145454246","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Growth in representation of Saudi scientists among Stanford's top 2 percent most-cited (2019-2023). 沙特科学家在斯坦福大学被引用最多的前2%中所占比例的增长(2019-2023年)。
IF 1.6 Pub Date : 2025-10-02 eCollection Date: 2025-01-01 DOI: 10.3389/frma.2025.1685185
Luluah Altukhaifi, Nouf Alturaiki, Khaled Al-Hadyan

Global citation-based databases, such as Stanford University's Top 2% Scientists (SUD2%) database, offer powerful tools for tracking high-impact researchers. Despite Saudi Arabia's growing investment in scientific research, a longitudinal analysis of its presence in these elite citation rankings has been lacking. This study provides the first 5-year analysis (2019-2023) of Saudi-affiliated scientists listed in the SUD2% (single-year category), evaluating their growth in numbers, performance indicators, disciplinary distribution, and gender representation. Data were extracted from Elsevier's Mendeley-hosted SUD2% dataset. The key bibliometric metrics under analysis included the average composite citation score (C-score), citation rank, total citations, and h-index. A one-way repeated measures ANOVA on ranks was used to assess statistical differences between Saudi-affiliated and global scientists. Gender classification was performed using NamSor, based on validated confidence thresholds. The number of Saudi-affiliated scientists in the SUD2% nearly tripled from 556 in 2019 to 1,684 in 2023. Significant gains were also observed in average C-scores (p = 0.003), citation ranks (p = 0.002), total citations (p = 0.001), and h-indices (p = 0.025). Disciplinary analysis revealed continued dominance in clinical medicine, chemistry, and biomedical research. Gender analysis revealed male dominance (93.9%) over the 5-year period, although female representation increased from 5.0% in 2019 to 7.3% in 2023. Saudi Arabia's scientific community is making statistically significant progress in high-impact research, evidenced by increasing representation and improved citation metrics in global SUD2% rankings. While gaps remain-particularly in gender representation and individual citation ranks-trends point toward sustained momentum and broadening institutional participation in global research excellence.

全球基于引文的数据库,如斯坦福大学的前2%科学家(SUD2%)数据库,为追踪高影响力研究人员提供了强大的工具。尽管沙特阿拉伯在科学研究方面的投资不断增加,但一直缺乏对其在这些精英引文排名中的存在进行纵向分析。本研究提供了第一个5年分析(2019-2023年),对SUD2%(单年度类别)中列出的沙特附属科学家进行了分析,评估了他们在数量、绩效指标、学科分布和性别代表性方面的增长。数据取自Elsevier的mendeley托管的SUD2%数据集。分析的关键文献计量指标包括平均综合引文得分(C-score)、引文排名、总被引次数和h-index。使用单向重复测量方差分析来评估沙特附属和全球科学家之间的统计差异。性别分类使用NamSor进行,基于验证的置信阈值。沙特附属科学家的数量从2019年的556人增加到2023年的1684人,几乎增加了两倍。在平均c分数(p = 0.003)、引文排名(p = 0.002)、总引文(p = 0.001)和h指数(p = 0.025)方面也观察到显著的提高。学科分析显示,临床医学、化学和生物医学研究继续占据主导地位。性别分析显示,在5年期间,男性占主导地位(93.9%),尽管女性比例从2019年的5.0%上升到2023年的7.3%。沙特阿拉伯科学界在高影响力研究方面取得了统计上的重大进展,在全球SUD2%的排名中,代表性和引用指标的提高证明了这一点。虽然差距仍然存在,特别是在性别代表性和个人引用排名方面,但趋势表明,全球卓越研究的持续势头和机构参与程度正在扩大。
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引用次数: 0
The Dimensions API: a domain specific language for scientometrics research. 维度API:用于科学计量学研究的领域特定语言。
IF 1.6 Pub Date : 2025-10-01 eCollection Date: 2025-01-01 DOI: 10.3389/frma.2025.1514938
Adam Kövári, Michele Pasin, Alexander Meduna

We describe the Dimensions Search Language (DSL), a domain-specific language for bibliographic and scientometrics analysis. The DSL is the main component of the Dimensions API (version 2.12.0), which provides end-users with a powerful, yet simple-to-learn and use, tool to search, filter, and analyze the Dimensions database using a single entry point and query language. The DSL is the result of an effort to model the way researchers and analysts describe research questions in this domain, as opposed to using established paradigms commonly used by software developers e.g., REST or SOAP. In this article, we describe the API architecture, the DSL main features, and the core data model. We describe how it is used by researchers and analysts in academic and business settings alike to carry out complex research analytics tasks, like calculating the H-index of a researcher or generating a publications' citation network.

我们描述了维度搜索语言(DSL),这是一种用于书目和科学计量学分析的领域特定语言。DSL是Dimensions API(版本2.12.0)的主要组件,它为最终用户提供了一个功能强大但易于学习和使用的工具,可以使用单一入口点和查询语言搜索、过滤和分析Dimensions数据库。DSL是对研究人员和分析人员在这个领域描述研究问题的方式进行建模的结果,而不是使用软件开发人员常用的已建立的范例,例如REST或SOAP。在本文中,我们将描述API体系结构、DSL主要特性和核心数据模型。我们描述了研究人员和分析师如何在学术和商业环境中使用它来执行复杂的研究分析任务,例如计算研究人员的h指数或生成出版物的引用网络。
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引用次数: 0
Qualitative data analysis: reflections, procedures, and some points for consideration. 定性数据分析:反思、程序和几点考虑。
IF 1.6 Pub Date : 2025-09-30 eCollection Date: 2025-01-01 DOI: 10.3389/frma.2025.1669578
Niroj Dahal

This article adopts a constructivist grounded theory approach based on the principle of intersubjective relations and the co-construction of interpretations. Reflecting on the author's experiences as a tutor, supervisor, examiner, and reviewer to demystify qualitative data analysis (QDA), this article emphasizes member checking with participants to confirm the researchers' interpretations and collaboratively constructed meanings, addressing reflexivity, peer debriefing, and triangulation. QDA is framed as an iterative, dynamic process of extracting meaning from diverse data forms (field text, narrative, voice, reflective note, text, audio, and video). The procedures of data analysis and/or writing as a process of inquiry, such as data immersion, initial impressions, codes, categories, and theme developments, are explored across methods or methodologies, including autoethnography, participatory action research (PAR), narrative inquiry, grounded theory, phenomenology, ethnography, case study, and other alternative research methods or methodologies, with data saturation as the final stepping point when no new data and/or insights from field text, narrative, voice, reflective note, text, audio, or video are extracted. Challenges like generating an intersubjective construction of meaning with research participants and achieving data saturation are addressed through methods such as reflexivity, peer debriefing, member checking and triangulation. This article provides a practical guide for scholars on data analysis, incorporating reflections, procedures, and some points for consideration to ensure rigor and meaningful analysis.

本文以主体间关系原则和解释的共构为基础,采用建构主义扎根理论的研究方法。反思作者作为导师、主管、审查员和审稿人的经历,以揭开定性数据分析(QDA)的神秘面纱,本文强调成员与参与者的检查,以确认研究人员的解释和合作构建的意义,解决反身性、同行汇报和三角测量。QDA是一个迭代的、动态的过程,从各种数据形式(字段文本、叙述、声音、反思笔记、文本、音频和视频)中提取意义。作为调查过程的数据分析和/或写作程序,如数据沉浸,初始印象,代码,类别和主题发展,通过各种方法或方法进行探索,包括自我民族志,参与式行动研究(PAR),叙事调查,扎根理论,现象学,民族志,案例研究和其他替代研究方法或方法。当没有新的数据和/或从现场文本、叙述、声音、反思笔记、文本、音频或视频中提取的见解时,将数据饱和作为最后的步骤点。通过反身性、同伴汇报、成员检查和三角测量等方法来解决诸如与研究参与者产生意义的主体间构建和实现数据饱和等挑战。本文为数据分析的学者提供了实用指南,包括反思,程序和一些考虑点,以确保分析的严谨性和意义。
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引用次数: 0
Topic analysis on publications and patents toward fully automated translational science benefits model impact extraction. 面向全自动转化科学效益模型影响提取的出版物和专利的主题分析。
IF 1.6 Pub Date : 2025-09-23 eCollection Date: 2025-01-01 DOI: 10.3389/frma.2025.1596687
Tejaswini Manjunath, Eline Appelmans, Sinem Balta, Dominick DiMercurio, Claudia Avalos, Karen Stark

Background: The Clinical and Translational Science Award (CTSA) program, funded by the National Center for Advancing Translational Sciences (NCATS), has supported over 65 hubs, generating 118,490 publications from 2006 to 2021. Measuring the impact of these outputs remains challenging, as traditional bibliometric methods fail to capture patents, policy contributions, and clinical implementation. The Translational Science Benefits Model (TSBM) provides a structured framework for assessing clinical, community, economic, and policy benefits, but its manual application is resource-intensive. Advances in Natural Language Processing (NLP) and Artificial Intelligence (AI) offer a scalable solution for automating benefit extraction from large research datasets.

Objective: This study presents an NLP-driven pipeline that automates the extraction of TSBM benefits from research outputs using Latent Dirichlet Allocation (LDA) topic modeling to enable efficient, scalable, and reproducible impact analysis. The application of NLP allows the discovery of topics and benefits to emerge from the very large corpus of CTSA documents without requiring directed searches or preconceived benefits for data mining.

Methods: We applied LDA topic modeling to publications, patents, and grants and mapped the topics to TSBM benefits using subject matter expert (SME) validation. Impact visualizations, including heatmaps and t-SNE plots, highlighted benefit distributions across the corpus and CTSA hubs.

Results: Spanning CTSA hub grants awarded from 2006 to 2023, our analysis corpus comprised 1,296 projects, 127,958 publications and 352 patents. Applying our NLP-driven pipeline to deduplicated data, we found that clinical and community benefits were the most frequently extracted benefits from publications and projects, reflecting the patient-centered and community-driven nature of CTSA research. Economic and policy benefits were less frequently identified, prompting the inclusion of patent data to better capture commercialization impacts. The Publications LDA Model proved the most effective for benefit extraction for publications and projects. All patents were automatically tagged as economic benefits, given their intrinsic focus on commercialization and in accordance with TSBM guidelines.

Conclusion: Automated NLP-driven benefit extraction enabled a data-driven approach to applying the TSBM at the scale of the entire CTSA program outputs.

背景:临床和转化科学奖(CTSA)项目由国家促进转化科学中心(NCATS)资助,支持了65个中心,从2006年到2021年产生了118,490篇出版物。衡量这些产出的影响仍然具有挑战性,因为传统的文献计量方法无法捕捉专利、政策贡献和临床实施。转化科学效益模型(TSBM)为评估临床、社区、经济和政策效益提供了一个结构化的框架,但它的手工应用是资源密集型的。自然语言处理(NLP)和人工智能(AI)的进展为从大型研究数据集中自动提取效益提供了可扩展的解决方案。目的:本研究提出了一个nlp驱动的管道,该管道使用潜在狄利克雷分配(Latent Dirichlet Allocation, LDA)主题建模从研究成果中自动提取TSBM收益,以实现高效、可扩展和可重复的影响分析。NLP的应用允许从非常大的CTSA文档语料库中发现主题和利益,而不需要直接搜索或数据挖掘的先入为主的利益。方法:我们将LDA主题建模应用于出版物、专利和授权,并使用主题专家(SME)验证将主题映射到TSBM收益。影响可视化,包括热图和t-SNE图,突出了语料库和CTSA中心之间的利益分布。结果:从2006年到2023年,我们的分析语料库包括1296个项目,127958篇出版物和352项专利。将我们的nlp驱动的管道应用于重复数据,我们发现临床和社区效益是最常见的从出版物和项目中提取的效益,反映了CTSA研究以患者为中心和社区驱动的性质。经济和政策利益较少被确定,促使纳入专利数据以更好地捕捉商业化影响。事实证明,出版物LDA模型对出版物和项目的利益提取最为有效。所有专利都被自动标记为经济效益,因为它们的内在重点是商业化,并符合TSBM指南。结论:自动nlp驱动的效益提取使数据驱动的方法能够在整个CTSA项目输出的规模上应用TSBM。
{"title":"Topic analysis on publications and patents toward fully automated translational science benefits model impact extraction.","authors":"Tejaswini Manjunath, Eline Appelmans, Sinem Balta, Dominick DiMercurio, Claudia Avalos, Karen Stark","doi":"10.3389/frma.2025.1596687","DOIUrl":"10.3389/frma.2025.1596687","url":null,"abstract":"<p><strong>Background: </strong>The Clinical and Translational Science Award (CTSA) program, funded by the National Center for Advancing Translational Sciences (NCATS), has supported over 65 hubs, generating 118,490 publications from 2006 to 2021. Measuring the impact of these outputs remains challenging, as traditional bibliometric methods fail to capture patents, policy contributions, and clinical implementation. The Translational Science Benefits Model (TSBM) provides a structured framework for assessing clinical, community, economic, and policy benefits, but its manual application is resource-intensive. Advances in Natural Language Processing (NLP) and Artificial Intelligence (AI) offer a scalable solution for automating benefit extraction from large research datasets.</p><p><strong>Objective: </strong>This study presents an NLP-driven pipeline that automates the extraction of TSBM benefits from research outputs using Latent Dirichlet Allocation (LDA) topic modeling to enable efficient, scalable, and reproducible impact analysis. The application of NLP allows the discovery of topics and benefits to emerge from the very large corpus of CTSA documents without requiring directed searches or preconceived benefits for data mining.</p><p><strong>Methods: </strong>We applied LDA topic modeling to publications, patents, and grants and mapped the topics to TSBM benefits using subject matter expert (SME) validation. Impact visualizations, including heatmaps and t-SNE plots, highlighted benefit distributions across the corpus and CTSA hubs.</p><p><strong>Results: </strong>Spanning CTSA hub grants awarded from 2006 to 2023, our analysis corpus comprised 1,296 projects, 127,958 publications and 352 patents. Applying our NLP-driven pipeline to deduplicated data, we found that clinical and community benefits were the most frequently extracted benefits from publications and projects, reflecting the patient-centered and community-driven nature of CTSA research. Economic and policy benefits were less frequently identified, prompting the inclusion of patent data to better capture commercialization impacts. The Publications LDA Model proved the most effective for benefit extraction for publications and projects. All patents were automatically tagged as economic benefits, given their intrinsic focus on commercialization and in accordance with TSBM guidelines.</p><p><strong>Conclusion: </strong>Automated NLP-driven benefit extraction enabled a data-driven approach to applying the TSBM at the scale of the entire CTSA program outputs.</p>","PeriodicalId":73104,"journal":{"name":"Frontiers in research metrics and analytics","volume":"10 ","pages":"1596687"},"PeriodicalIF":1.6,"publicationDate":"2025-09-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12500706/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145254019","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Research funding challenges in Brazil: researchers' perceptions from a public institution of professional education. 巴西的研究经费挑战:来自公共专业教育机构的研究人员的看法。
IF 1.6 Pub Date : 2025-09-22 eCollection Date: 2025-01-01 DOI: 10.3389/frma.2025.1553928
Cristhian Chagas Ribeiro, Woska Pires da Costa, Marcos de Moraes Sousa, Priscilla Rayanne E Silva, Vicente Miñana-Signes, Matias Noll

Introduction: In a global landscape characterized by intense competition and stringent funding criteria, researchers face the dual challenges of limited resources and high demand for innovation-a challenge that Brazil is no exception to. This study aimed to explore the perceptions, barriers, and challenges faced by researchers during the project submission process for approval by funding agencies, with a focus on schools within the Federal Network of Professional, Scientific, and Technological Education Institutions.

Methods: A quantitative cross-sectional approach was used to examine the characteristics of researchers at a Brazilian institution in 2023. The sample comprised eighty three researchers who completed an online questionnaire containing eighty three questions on demographic characteristics, factors associated with project submission and approval, and reasons for non-submission or non-approval. The data were analyzed using descriptive statistics, including the Kolmogorov-Smirnov, Pearson's chi-square, and Mann-Whitney U-tests, followed by post hoc analysis and Yates' correction. Logistic regression was applied using the backward elimination method, and significant parameters (p < 0.20) free from multicollinearity were selected.

Results: This study revealed that most researchers were men (61.4%) with doctoral degrees (91.6%), highlighted the critical role of proposal clarity and relevance in the project evaluation process. Gender (p = 0.011) and academic level (p = 0.025) were significant factors influencing project submission rates, with Brazilian National Council for Scientific and Technological Development (CNPq) fellows and researchers involved in graduate programs submitting more projects. The participants identified "search for funding" and "desire to expand research impact" as their primary motivations while citing "complex funding calls" and "funding limitations" as major barriers. Additionally, age and the number of children were found to affect project approval (p ≤ 0.018), with "proposal clarity" and "researchers' experience" having been critical factors for submission approval (p ≤ 0.03).

Conclusion: The study results highlighted a gender disparity, with lower participation among women, and identified key factors influencing project submission, including the search for funding, curriculum development, and structural challenges. Additionally, the findings suggest the adoption of gender-sensitive and early-career grant criteria, targeted support for underrepresented researchers, and flexible mechanisms for those with caregiving responsibilities. These findings underscore the importance of public policies and institutional strategies in promoting equitable and inclusive funding opportunities.

导言:在以激烈竞争和严格的资助标准为特征的全球格局中,研究人员面临着资源有限和创新需求高的双重挑战,巴西也不例外。本研究旨在探讨研究人员在项目提交过程中面临的认知、障碍和挑战,以联邦专业、科学和技术教育机构网络内的学校为重点。方法:采用定量横断面方法研究2023年巴西一家机构研究人员的特征。样本由83名研究人员组成,他们完成了一份在线问卷,其中包含83个问题,涉及人口统计学特征、与项目提交和批准相关的因素,以及不提交或不批准的原因。对数据进行描述性统计分析,包括Kolmogorov-Smirnov检验、Pearson卡方检验和Mann-Whitney u检验,然后进行事后分析和Yates校正。Logistic回归采用逆向消去法,选取不存在多重共线性的显著参数(p < 0.20)。结果:研究发现,大多数研究人员为男性(61.4%),具有博士学位(91.6%),突出了提案清晰度和相关性在项目评估过程中的关键作用。性别(p = 0.011)和学术水平(p = 0.025)是影响项目提交率的重要因素,巴西国家科学和技术发展委员会(CNPq)的研究员和参与研究生项目的研究人员提交的项目更多。与会者指出,“寻求资助”和“扩大研究影响的愿望”是他们的主要动机,而“复杂的资助呼吁”和“资助限制”是主要障碍。此外,年龄和儿童数量影响项目批准(p≤0.018),“提案清晰度”和“研究人员经验”已成为提交批准的关键因素(p≤0.03)。结论:研究结果突出了性别差异,妇女参与率较低,并确定了影响项目提交的关键因素,包括寻求资金、课程制定和结构挑战。此外,研究结果还建议采用性别敏感和早期职业补助标准,为代表性不足的研究人员提供有针对性的支持,并为那些承担照顾责任的人提供灵活的机制。这些发现强调了公共政策和机构战略在促进公平和包容性融资机会方面的重要性。
{"title":"Research funding challenges in Brazil: researchers' perceptions from a public institution of professional education.","authors":"Cristhian Chagas Ribeiro, Woska Pires da Costa, Marcos de Moraes Sousa, Priscilla Rayanne E Silva, Vicente Miñana-Signes, Matias Noll","doi":"10.3389/frma.2025.1553928","DOIUrl":"10.3389/frma.2025.1553928","url":null,"abstract":"<p><strong>Introduction: </strong>In a global landscape characterized by intense competition and stringent funding criteria, researchers face the dual challenges of limited resources and high demand for innovation-a challenge that Brazil is no exception to. This study aimed to explore the perceptions, barriers, and challenges faced by researchers during the project submission process for approval by funding agencies, with a focus on schools within the Federal Network of Professional, Scientific, and Technological Education Institutions.</p><p><strong>Methods: </strong>A quantitative cross-sectional approach was used to examine the characteristics of researchers at a Brazilian institution in 2023. The sample comprised eighty three researchers who completed an online questionnaire containing eighty three questions on demographic characteristics, factors associated with project submission and approval, and reasons for non-submission or non-approval. The data were analyzed using descriptive statistics, including the Kolmogorov-Smirnov, Pearson's chi-square, and Mann-Whitney <i>U</i>-tests, followed by <i>post hoc</i> analysis and Yates' correction. Logistic regression was applied using the backward elimination method, and significant parameters (<i>p</i> < 0.20) free from multicollinearity were selected.</p><p><strong>Results: </strong>This study revealed that most researchers were men (61.4%) with doctoral degrees (91.6%), highlighted the critical role of proposal clarity and relevance in the project evaluation process. Gender (<i>p</i> = 0.011) and academic level (<i>p</i> = 0.025) were significant factors influencing project submission rates, with Brazilian National Council for Scientific and Technological Development (<i>CNPq</i>) fellows and researchers involved in graduate programs submitting more projects. The participants identified \"search for funding\" and \"desire to expand research impact\" as their primary motivations while citing \"complex funding calls\" and \"funding limitations\" as major barriers. Additionally, age and the number of children were found to affect project approval (<i>p</i> ≤ 0.018), with \"proposal clarity\" and \"researchers' experience\" having been critical factors for submission approval (<i>p</i> ≤ 0.03).</p><p><strong>Conclusion: </strong>The study results highlighted a gender disparity, with lower participation among women, and identified key factors influencing project submission, including the search for funding, curriculum development, and structural challenges. Additionally, the findings suggest the adoption of gender-sensitive and early-career grant criteria, targeted support for underrepresented researchers, and flexible mechanisms for those with caregiving responsibilities. These findings underscore the importance of public policies and institutional strategies in promoting equitable and inclusive funding opportunities.</p>","PeriodicalId":73104,"journal":{"name":"Frontiers in research metrics and analytics","volume":"10 ","pages":"1553928"},"PeriodicalIF":1.6,"publicationDate":"2025-09-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12497820/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145246021","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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Frontiers in research metrics and analytics
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