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Enhancing research support services in health organizations by implementing a “Research Concierge Desk”, a case study 通过实施 "研究礼宾服务台 "加强医疗机构的研究支持服务,案例研究
Pub Date : 2024-04-05 DOI: 10.3389/frma.2024.1335240
A. Alfattani, Abeer AlFirm, Norah Albedah, Haifa Aldakhil, Elaf Al Muaythir, Leena Zeyad, Yasmin AlTwaijri
Health organizations with teaching and research responsibilities face the need to establish a comprehensive system that addresses the processes and challenges associated with research activities; a system that assists local institutes in becoming research-active by identifying gaps and providing actionable recommendations. The involvement of epidemiologists, biostatisticians, and data scientists is paramount in offering technical and scientific support to health researchers. In our organization, research support services, such as technical, statistical, logistical, and scientific assistance, have been provided to researchers for the past 20 years under the name of “Data Clinic Service”. This article discusses the establishment of a physical booth called the “Research Concierge Desk” within a medical center to offer on-site, free-of-charge, and direct consultations to researchers, thereby improving accessibility to data clinic services. The underlying concept of the “Research Concierge Desk” is to align the research workflow for busy clinicians, who require vital assistance in the technical aspects of their research. As well, the desk and its digital platform enabled us to assess research process workflow, such as research submission, data clinic requests, research progress tracking, and researcher satisfaction assessment. We present the initiation of the “Research Concierge Desk” as an innovative solution in hospital settings, outline the available resources, benefits, challenges, and propose areas for improvement. The experience gained from implementing the “Research Concierge Desk” model can greatly benefit other health centers in adopting a similar approach to develop enhanced services for clinical researchers.
承担教学和研究任务的卫生机构需要建立一个全面的系统,以解决与研究活动相关的流程和挑战;该系统通过找出差距和提供可行的建议,协助地方机构积极开展研究。流行病学家、生物统计学家和数据科学家的参与对于向卫生研究人员提供技术和科学支持至关重要。在我们组织,过去 20 年来一直以 "数据诊所服务 "的名义为研究人员提供研究支持服务,如技术、统计、后勤和科学援助。本文将讨论在医疗中心内设立一个名为 "研究礼宾服务台 "的实体展位,为研究人员提供现场、免费和直接的咨询,从而提高数据诊所服务的可及性。研究服务台 "的基本概念是为繁忙的临床医生调整研究工作流程,因为他们在研究的技术方面需要重要的帮助。此外,该服务台及其数字平台使我们能够评估研究流程工作流,如研究提交、数据门诊请求、研究进展跟踪和研究人员满意度评估。我们介绍了 "研究服务台 "作为医院创新解决方案的启动情况,概述了可用资源、优势和挑战,并提出了需要改进的地方。从实施 "研究礼宾服务台 "模式中获得的经验将大大有益于其他医疗中心采用类似方法为临床研究人员提供更好的服务。
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引用次数: 0
Editorial: Quality and quantity in research assessment: examining the merits of metrics, volume II 社论:研究评估中的质量与数量:审视衡量标准的优点》,第 II 卷
Pub Date : 2024-03-26 DOI: 10.3389/frma.2024.1400009
Maziar Montazerian, Najmeh Shaghaei, T. Drachen, B. Dorch
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引用次数: 0
Editorial: Text mining-based mental health research 社论:基于文本挖掘的心理健康研究
Pub Date : 2024-03-22 DOI: 10.3389/frma.2024.1388691
Tehmina Amjad, Tatsawan Timakum, Qing Xie, Min Song
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引用次数: 0
Operational tolerance research in liver transplantation: a bibliometric analysis using a new web resource 肝移植手术耐受性研究:利用新网络资源进行文献计量分析
Pub Date : 2024-03-14 DOI: 10.3389/frma.2024.1368534
Ángel Esteban-Gil, Juan José Martínez-García, Daniel Vidal-Correoso, Ana M. Muñoz-Morales, Pablo Ramírez, José A Pons, A. Baroja-Mazo
Operational tolerance in liver transplantation (OT-LT), defined as the graft survival with normal function in absence of immunosuppression, has been a field of intense research since the 1980s. Thereafter, tens of clinical trials and hundreds of articles have been published, making it challenging for researchers to assimilate all the information, more so outside of their disciplines. The aim of the present study was to analyze the research in OT-LT through a new web tool (https://tolerance.imib.es).We have developed a web resource that allowed the identification of the present trends and potential research avenues in OL-LT, an overview biomedical terms that were most often cited, including which journals published the most articles, and an advanced search engine that exploited all the information in these publications.A total of 734 studies were analyzed until November 2023, with a mean of 15 articles published per year, a total sum of 3,751 impact factor points and a total of 26,542 citations. The analysis of citations allowed us to establish a ranking of the most prolific countries, authors, journals and institutions, in addition to the most influential publications in OT-LT. Likewise, keyword and co-occurrence analyses answered which themes involving OT-LT are the most popular, whereas cooperation analysis showed that principal authors in OT-LT form a network, although the lack of international cooperation, especially with regard to clinical trials, appears to be one of the main challenges.Despite its limitations, our web tool will allow both OT-LT expert and novel researchers to be able to draw a comprehensive picture of the past, present and future of OT-LT research.
肝移植中的操作耐受(OT-LT)是指在没有免疫抑制的情况下,移植物存活且功能正常。此后,数十项临床试验和数百篇文章相继发表,这使得研究人员在吸收所有信息方面面临挑战,尤其是本学科以外的研究人员。本研究的目的是通过一个新的网络工具(https://tolerance.imib.es)分析 OT-LT 的研究情况。我们开发了一个网络资源,可用于识别 OL-LT 的当前趋势和潜在研究途径,概述最常被引用的生物医学术语,包括发表文章最多的期刊,以及一个可利用这些出版物中所有信息的高级搜索引擎。截至 2023 年 11 月,共对 734 项研究进行了分析,平均每年发表 15 篇文章,影响因子总和为 3751 分,总引用次数为 26542 次。通过对引文的分析,我们确定了最多产的国家、作者、期刊和机构的排名,以及在 OT-LT 领域最有影响力的出版物。同样,关键词和共现分析回答了哪些涉及 OT-LT 的主题最受欢迎,而合作分析表明,OT-LT 的主要作者形成了一个网络,尽管缺乏国际合作,特别是在临床试验方面,似乎是主要挑战之一。
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引用次数: 0
Digital twins in sustainable transition: exploring the role of EU data governance. 可持续转型中的数字双胞胎:探索欧盟数据治理的作用。
Pub Date : 2024-03-07 eCollection Date: 2024-01-01 DOI: 10.3389/frma.2024.1303024
Beatrice Garske, Wilmont Holz, Felix Ekardt

Introduction: Digital twins can accelerate sustainable development by leveraging big data and artificial intelligence to simulate state, reactions and potential developments of physical systems. In doing so, they can create a comprehensive basis for data-driven policy decisions. One of the purposes of digital twins is to facilitate the implementation of the EU's Green Deal-in line with internationally binding climate and environmental targets. One prerequisite for the success of digital twins is a comprehensive, high-quality database. This requires a suitable legal framework that ensures access to such data.

Methods: Applying a qualitative governance analysis, the following article examines if the EU's strategies and legal acts on data governance are paving the way for digital twin projects which promote sustainability.

Results: Results show important starting points for open and fair data use within the growing field of EU digital law. However, there is still a lot of progress to be made to legally link the use of digital twins with binding sustainability objectives.

导言:数字双胞胎可以利用大数据和人工智能模拟物理系统的状态、反应和潜在发展,从而加速可持续发展。这样,它们就能为数据驱动的政策决策奠定全面的基础。数字孪生的目的之一是促进欧盟 "绿色交易 "的实施,以符合具有国际约束力的气候和环境目标。数字孪生取得成功的一个先决条件是要有一个全面、高质量的数据库。这就需要一个合适的法律框架,以确保对此类数据的访问:本文通过定性治理分析,探讨欧盟的数据治理战略和法律法规是否为促进可持续发展的数字孪生项目铺平了道路:结果:结果表明,在欧盟不断发展的数字法律领域,开放和公平使用数据是重要的起点。然而,要在法律上将数字孪生的使用与具有约束力的可持续发展目标联系起来,还有许多工作要做。
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引用次数: 0
Assessment of search strategies in Medline to identify studies on the impact of long COVID on workability 评估 Medline 的搜索策略,以确定有关长 COVID 对工作能力影响的研究
Pub Date : 2024-03-01 DOI: 10.3389/frma.2024.1300533
J. Gehanno, Isabelle Thaon, Carole Pelissier, L. Rollin
Studies on the impact of long COVID on work capacity are increasing but are difficult to locate in bibliographic databases, due to the heterogeneity of the terms used to describe this new condition and its consequences. This study aims to report on the effectiveness of different search strategies to find studies on the impact of long COVID on work participation in PubMed and to create validated search strings.We searched PubMed for articles published on Long COVID and including information about work. Relevant articles were identified and their reference lists were screened. Occupational health journals were manually scanned to identify articles that could have been missed. A total of 885 articles potentially relevant were collected and 120 were finally included in a gold standard database. Recall, Precision, and Number Needed to Read (NNR) of various keywords or combinations of keywords were assessed.Overall, 123 search-words alone or in combination were tested. The highest Recalls with a single MeSH term or textword were 23 and 90%, respectively. Two different search strings were developed, one optimizing Recall while keeping Precision acceptable (Recall 98.3%, Precision 15.9%, NNR 6.3) and one optimizing Precision while keeping Recall acceptable (Recall 90.8%, Precision 26.1%, NNR 3.8).No single MeSH term allows to find all relevant studies on the impact of long COVID on work ability in PubMed. The use of various MeSH and non-MeSH terms in combination is required to recover such studies without being overwhelmed by irrelevant articles.
有关长期慢性阻塞性肺气肿对工作能力的影响的研究越来越多,但由于描述这种新疾病及其后果的术语不尽相同,因此很难在文献数据库中找到相关研究。本研究旨在报告不同搜索策略的有效性,以便在 PubMed 上找到有关长 COVID 对工作参与影响的研究,并创建有效的搜索字符串。我们在 PubMed 上搜索了发表过的有关长 COVID 并包含工作信息的文章,确定了相关文章并对其参考文献列表进行了筛选。我们还对职业健康期刊进行了人工扫描,以确定可能遗漏的文章。共收集到 885 篇可能相关的文章,最终有 120 篇被纳入金标准数据库。对各种关键词或关键词组合的回收率、精确率和阅读需求数(NNR)进行了评估。单个 MeSH 术语或文本词的最高召回率分别为 23% 和 90%。我们开发了两种不同的搜索字符串,一种在保持可接受精确度的同时优化了召回率(召回率为 98.3%,精确度为 15.9%,净召回率为 6.3),另一种在保持可接受召回率的同时优化了精确度(召回率为 90.8%,精确度为 26.1%,净召回率为 3.8)。没有一个单一的 MeSH 词可以在 PubMed 中找到所有关于长 COVID 对工作能力影响的相关研究,因此需要结合使用各种 MeSH 和非 MeSH 词来检索此类研究,而不会被不相关的文章淹没。
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引用次数: 0
Cascaded Semantic Fractionation for identifying a domain in social media 级联语义分割法识别社交媒体中的领域
Pub Date : 2024-03-01 DOI: 10.3389/frma.2024.1189099
James Danowski, Ken Riopelle, Bei Yan
Searching social media to find relevant semantic domains often results in large text files, many of which are irrelevant due to cross-domain content resulting from word polysemy, abstractness, and degree centrality. Through an iterative pruning process, Cascaded Semantic Fractionation (CSF) systematically removes these cross-domain links. The social network procedure performs community detection in semantic networks, locates the semantic groups containing the terms of interest, excludes intergroup links, and repeats community detection on the pruned intragroup network until the domain of interest is clarified. To illustrate CSF, we analyzed public Facebook posts, using the CrowdTangle app for historical data search, from February 3, 2020, to March 13, 2021, about the possible Wuhan lab leak of COVID-19 over a daily interval. The initial search using keywords located six multi-day bursts of posts of more than 500 per day among 95 K posts. These posts were network analyzed to find the domain of interest using the iterative community detection and pruning process. CSF can be applied to capture the evolutions in semantic domains over time. At the outset, the lab leak theory was presented in conspiracy theory terms. Over time, the conspiratorial elements washed out in favor of an accidental release as the issue moved from social to mainstream media and official government views. CSF identified the relevant social media semantic domain and tracked its changes.
通过搜索社交媒体来查找相关语义域往往会产生大量文本文件,其中许多都是由于单词多义性、抽象性和程度中心性导致的跨域内容而变得无关紧要。通过迭代剪枝过程,级联语义分馏(CSF)系统地删除了这些跨域链接。该社会网络程序在语义网络中执行社群检测,找到包含相关术语的语义组,排除组间链接,并在剪枝后的组内网络上重复进行社群检测,直至明确相关领域。为了说明 CSF,我们使用 CrowdTangle 应用程序进行历史数据搜索,分析了 2020 年 2 月 3 日至 2021 年 3 月 13 日期间 Facebook 上关于 COVID-19 可能在武汉实验室泄漏的每日间隔的公开帖子。使用关键词进行的初步搜索在 95 K 个帖子中找到了 6 个多日突发帖子,每天超过 500 个。通过对这些帖子进行网络分析,使用迭代社区检测和剪枝过程找到了感兴趣的领域。CSF 可用于捕捉语义域随时间的演变。一开始,实验室泄密理论是用阴谋论的术语来表述的。随着时间的推移,阴谋论元素逐渐消失,转而支持意外泄漏,因为这一问题已经从社交媒体转向主流媒体和政府官方观点。CSF 确定了相关的社交媒体语义域并跟踪其变化。
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引用次数: 0
There are alternatives. Models for sustainable employment structures in the German system of higher education 还有其他选择。德国高等教育体系中的可持续就业结构模式
Pub Date : 2024-03-01 DOI: 10.3389/frma.2024.1301354
Mathias Kuhnt, Peter Müßig, Tilman Reitz
The German system of higher education and public research is characterized by a high rate of temporary contracts with short contract durations and a nearly complete absence of structured career options. About 82% of employees not holding a full professorship have fixed-term contracts, with an average contract period of 20 months. This is facilitated by a special fixed-term employment law (Wissenschaftszeitvertragsgesetz) which universities and other public research institutions have stretched to its limits. Against the background of a survey which we conducted in 2021 and whose results once more demonstrate the shortcomings of this system, we discuss alternative options in the form of model calculations. We propose a reform of employment structures and career paths that could improve not only personal working conditions but also ensure the quality of research and teaching in German academia. By quantitative comparison with the current employment situation, our model calculation demonstrates that plannable career decisions can be enabled at an early stage without changing budgets or teaching duties. We also show that the counter argument of a “congestion” of positions is not substantiated, and that young scholars will still have the opportunity to start a career in the reformed system, while the total number of employees can be kept nearly constant.
德国高等教育和公共研究系统的特点是,临时合同比例高,合同期短,几乎完全没 有结构化的职业选择。约 82% 的非全职教授雇员持有定期合同,平均合同期为 20 个月。大学和其他公共研究机构已将这一特殊的定期雇佣法(Wissenschaftszeitvertragsgesetz)运用到了极致。我们在 2021 年进行了一项调查,其结果再次证明了这一制度的缺陷,在此背景下,我们以模型计算的形式讨论了替代方案。我们建议对就业结构和职业发展路径进行改革,这不仅可以改善个人工作条件,还可以确保德国学术界的研究和教学质量。通过与当前就业状况的定量比较,我们的模型计算表明,在不改变预算或教学任务的情况下,可以在早期阶段做出可规划的职业决定。我们还表明,职位 "拥挤 "的反驳论点并不成立,年轻学者仍有机会在改革后的体系中开始职业生涯,而员工总数则可保持基本不变。
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引用次数: 0
Scholar Metrics Scraper (SMS): automated retrieval of citation and author data. Scholar Metrics Scraper (SMS):自动检索引文和作者数据。
Pub Date : 2024-02-22 eCollection Date: 2024-01-01 DOI: 10.3389/frma.2024.1335454
Yutong Cao, Nicole A Cheung, Dean Giustini, Jeffrey LeDue, Timothy H Murphy

Academic departments, research clusters and evaluators analyze author and citation data to measure research impact and to support strategic planning. We created Scholar Metrics Scraper (SMS) to automate the retrieval of bibliometric data for a group of researchers. The project contains Jupyter notebooks that take a list of researchers as an input and exports a CSV file of citation metrics from Google Scholar (GS) to visualize the group's impact and collaboration. A series of graph outputs are also available. SMS is an open solution for automating the retrieval and visualization of citation data.

学术部门、研究集群和评估人员分析作者和引用数据,以衡量研究影响并支持战略规划。我们创建了 Scholar Metrics Scraper (SMS),以自动检索一组研究人员的文献计量数据。该项目包含 Jupyter 笔记本,可将研究人员名单作为输入,并从谷歌学术(GS)中导出引文指标的 CSV 文件,从而直观地显示研究小组的影响力和合作情况。此外,还提供一系列图表输出。SMS 是自动检索和可视化引文数据的开放式解决方案。
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引用次数: 0
Editorial bullying: an exploration of acts impacting publication ethics and related environment. 编辑欺凌:对影响出版伦理和相关环境的行为的探讨。
Pub Date : 2024-02-21 eCollection Date: 2024-01-01 DOI: 10.3389/frma.2024.1345553
Fawad Javed, Dimitrios Michelogiannakis, P Emile Rossouw

Bullying and misconduct in the realm of scientific and scholarly publishing have the potential to jeopardize the transparency and integrity of academic discourse. While misconduct issues among authors have been extensively discussed, the role of editors in perpetuating or mitigating such problems has garnered less attention. Scientific publishing serves as the gateway for disseminating innovative research findings globally, and the role of editors, especially Editor/s-in-chief, is pivotal in safeguarding the rigor and credibility of published research. Editor bullying and misconduct involve behaviors that undermine the scientific process, compromise research integrity, and harm the careers and wellbeing of individuals. These actions may manifest as biased decision-making, suppression of dissenting voices, or the exploitation of power dynamics in the peer review process. To address these issues, preventive and therapeutic approaches are suggested, including enhancing awareness, recognizing and mitigating exacerbating factors, and upholding professionalism. Moreover, the importance of a conflict-of-interest declaration for editors is highlighted to ensure transparency and integrity in the editorial process. The present mini-review aims to shed light on editor bullying, illuminating its gravity and the urgency to address these issues within the academic publishing domain/s. This review underscores the more subtle, yet equally significant, issue of professional misconduct in the editorial realm of scientific journals.

科学和学术出版领域的欺凌和不端行为有可能损害学术话语的透明度和完整性。虽然作者中的不端行为问题已被广泛讨论,但编辑在延续或缓解此类问题方面所扮演的角色却鲜有人关注。科学出版是在全球范围内传播创新研究成果的门户,而编辑,尤其是主编/编辑,在保障出版研究的严谨性和可信度方面发挥着举足轻重的作用。编辑欺凌和不当行为涉及破坏科学进程、损害研究诚信、损害个人职业和福祉的行为。这些行为可能表现为有偏见的决策、压制不同意见或利用同行评审过程中的权力动态。为解决这些问题,建议采取预防和治疗方法,包括提高意识、认识和减少加剧因素以及坚持专业精神。此外,还强调了编辑利益冲突声明的重要性,以确保编辑过程的透明度和完整性。本微型综述旨在揭示编辑欺凌问题,阐明其严重性以及在学术出版领域解决这些问题的紧迫性。本综述强调了科学期刊编辑领域更微妙但同样重要的职业不端行为问题。
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引用次数: 0
期刊
Frontiers in research metrics and analytics
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