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Sustainable soil and land management: a systems-oriented overview of scientific literature 可持续的土壤和土地管理:以系统为导向的科学文献综述
Q3 SOIL SCIENCE Pub Date : 2023-12-18 DOI: 10.3389/fsoil.2023.1268037
Eloise Mason, Antonio Bispo, Mireille Matt, Katharina Helming, Elena Rodriguez, Rocio Lansac, Violeta Carrasco, Mohammad Rafiul Hashar, Loes Verdonk, Gundula Prokop, David Wall, Nancy Francis, Peter Laszlo, Michael Löbmann
Healthy soil is vital for our wellbeing and wealth. However, increasing demand for food and biomass may lead to unsustainable soil and land management practices that threaten soils. Other degradation processes such as soil sealing also endanger soil resources. Identifying and accessing the best available knowledge is crucial to address related sustainability issues and promote the needed transition towards sustainable soil and land management practices. Such knowledge has to cover all knowledge domains, system knowledge, target knowledge, and transformation knowledge. However, a comprehensive overview of existing research addressing societal needs related to soil is still missing, which hinders the identification of knowledge gaps. This study provides a detailed analysis of scientific literature to identify ongoing research activities and trends. A quantitative and qualitative analysis of scientific literature related to sustainable soil and land management was conducted. A systems-oriented analytical framework was used that combines soil and land related societal challenges with related knowledge domains. Our analysis revealed a significant increase in scientific publications and related interest in soil and land use-related research, above the average increase of publications within all scientific fields. Different forms of reduction and remediation of soil degradation processes (e.g. erosion, contamination) have been studied most extensively. Other topic areas like land take mitigation, soil biodiversity increase, increase of ecosystem services provision and climate change mitigation and adaption seem to be rather recent concerns, less investigated. We could highlight the importance of context-specific research, as different regions require different practices. For instance, boreal, tropical, karst and peatland regions were less studied. Furthermore, we found that diversifying soil management practices such as agroforestry or including livestock into arable systems are valuable options for increasing biomass, mitigating/adapting to climate change, and improving soil related ecosystem services. A recent trend towards the latter research topic indicates the transition from a soil conservation-oriented perspective to a soil service-oriented perspective, which may be better suited to integrate the social and economic dimensions of soil health improvement alongside the ecological dimension.
健康的土壤对我们的福祉和财富至关重要。然而,对粮食和生物质日益增长的需求可能会导致不可持续的土壤和土地管理方法,从而威胁到土壤。土壤封闭等其他退化过程也会危及土壤资源。要解决相关的可持续性问题,促进向可持续的土壤和土地管理方法过渡,确定和获取现有的最佳知识至关重要。这些知识必须涵盖所有知识领域、系统知识、目标知识和转化知识。然而,目前仍然缺乏针对土壤相关社会需求的现有研究的全面概述,这阻碍了对知识差距的识别。本研究对科学文献进行了详细分析,以确定正在进行的研究活动和趋势。对与可持续土壤和土地管理相关的科学文献进行了定量和定性分析。研究采用了以系统为导向的分析框架,将与土壤和土地相关的社会挑战与相关知识领域结合起来。我们的分析表明,与土壤和土地利用相关的科学出版物和相关研究兴趣大幅增加,高于所有科学领域出版物的平均增幅。对不同形式的土壤退化过程(如侵蚀、污染)的减少和补救进行了最广泛的研究。其他专题领域,如减少土地占用、增加土壤生物多样性、增加生态系统服务供应以及减缓和适应气候变化,似乎是最近才关注的问题,研究较少。我们可以强调针对具体情况进行研究的重要性,因为不同地区需要不同的做法。例如,对北方、热带、喀斯特和泥炭地地区的研究较少。此外,我们还发现,农林业或将牲畜纳入耕地系统等多样化土壤管理实践是增加生物量、减缓/适应气候变化以及改善土壤相关生态系统服务的宝贵选择。后一个研究课题的最新趋势表明,人们正在从以土壤保护为导向的视角过渡到以土壤服务为导向的视角,这种视角可能更适合将改善土壤健康的社会和经济层面与生态层面结合起来。
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引用次数: 0
Improving a regional peat thickness map using soil apparent electrical conductivity measurements at the field-scale 利用实地土壤表观导电率测量结果改进区域泥炭厚度图
Q3 SOIL SCIENCE Pub Date : 2023-12-01 DOI: 10.3389/fsoil.2023.1305105
Raphaël Deragon, Brandon Heung, Nicholas Lefebvre, Kingsley John, A. Cambouris, Jean Caron
The increased adoption of proximal sensors has helped to generate peat mapping products: they gather data quickly and can detect the peat-mineral later boundary. A third layer, made of sedimentary peat (limnic layers, gyttja), can sometimes be found in between them. This material is highly variable spatially and is associated with degraded soil properties when located near the surface.This study aimed to assess the potential of direct current resistivity measurements to predict the maximum peat thickness (MPT), defined as the non-limnic peat thickness, to facilitate soil conservation and management practices at the field-scale. The results were also compared to a regional map of the MPT from a previous study used and also tested as a covariate. This study was conducted in a shallow (MPT = 8-138 cm) cultivated organic soil from Québec, Canada. The MPT was mapped using the apparent electrical conductivity (ECa) from a Veris Q2800, and a digital elevation model, with and without a regional MPT map (RM) as a covariate to downscale it. Three machine-learning algorithms (Cubist, Random Forest, and Support Vector Regression) were compared to ordinary kriging (OK), multiple linear regression, and multiple linear regression kriging (MLRK) models.The best predictive performance was achieved with OK (Lin’s CCC = 0.89, RMSE = 13.75 cm), followed by MLRK-RM (CCC = 0.85, RMSE = 15.7 cm). All models were more accurate than the RM (CCC = 0.65, RMSE = 29.85 cm), although they underpredicted MPT > 100 cm. Moreover, the addition of the RM as a covariate led to a lower prediction error and higher accuracy for all models. Overall, a field-scale approach could better support precision soil conservation interventions by generating more accurate management zones. Future studies should test multi-sensor fusion and other geophysical sensors to further improve the model performance and detect deeper boundaries.
越来越多地采用近端传感器有助于生成泥炭制图产品:它们能迅速收集数据,并能探测到泥炭矿物的后期边界。第三层由沉积泥炭构成(湖沼层,gyttja),有时可以在它们之间找到。这种物质在空间上是高度可变的,当位于地表附近时,它与退化的土壤性质有关。本研究旨在评估直流电阻率测量在预测最大泥炭厚度(MPT)(定义为非沼泽泥炭厚度)方面的潜力,以促进农田尺度上的土壤保持和管理实践。结果还与先前研究中使用的MPT区域图进行了比较,并作为协变量进行了测试。本研究在加拿大quacimubec的浅层(MPT = 8-138 cm)栽培有机土壤中进行。使用Veris Q2800的视电导率(ECa)和数字高程模型绘制MPT图,并使用或不使用区域MPT图(RM)作为协变量来缩小其比例。将三种机器学习算法(立体主义、随机森林和支持向量回归)与普通克里格(OK)、多元线性回归和多元线性回归克里格(MLRK)模型进行了比较。预测效果最好的是OK (Lin’s CCC = 0.89, RMSE = 13.75 cm),其次是MLRK-RM (CCC = 0.85, RMSE = 15.7 cm)。所有模型都比RM更准确(CCC = 0.65, RMSE = 29.85 cm),尽管它们低估了MPT > 100 cm。此外,添加RM作为协变量导致所有模型的预测误差更低,精度更高。总体而言,通过产生更精确的管理区域,田间尺度的方法可以更好地支持精确的土壤保持干预措施。未来的研究应该测试多传感器融合和其他地球物理传感器,以进一步提高模型性能并检测更深的边界。
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引用次数: 0
Extended soil surface drying triggered by subsurface drip irrigation decouples carbon and nitrogen cycles and alters microbiome composition 地表下滴灌引发的长时间土壤表面干燥使碳氮循环脱钩并改变了微生物群的组成
Q3 SOIL SCIENCE Pub Date : 2023-11-17 DOI: 10.3389/fsoil.2023.1267685
Deirdre Griffin‐LaHue, Daoyuan Wang, Amélie C. M. Gaudin, Blythe Durbin-Johnson, Matthew L. Settles, K. Scow
Irrigation management dramatically alters soil water availability and distribution and could impact soil microbial communities and carbon (C) and nitrogen (N) cycling to an even greater degree than observed in rainfed systems. Adoption of subsurface drip irrigation (SDI) in California’s Mediterranean agroecosystems provides agronomic benefits but wets only a portion of the soil volume near the root zone, leaving the rest dry throughout the growing season. In contrast, traditional furrow irrigation (FI) has periodic wetting events with more homogenous moisture distribution. With conversion to precision irrigation methods, how will the microbiome respond to changes moisture availability, and how is their response influenced by soil C and N resource levels?In a field experiment in California, we compared SDI and FI’s effects on microbial communities and evaluated how long-term organic and conventional management systems impact outcomes. Throughout the growing season, soil samples were collected at two depths (0-15, 15-30 cm) and three distances from bed center (10, 25, 45 cm) where the drip tape is located.At harvest, soils irrigated using SDI had lower microbial biomass C (MBC) than under FI at the surface and showed a build-up of soluble C and N relative to MBC at the bed edge, indicating reduced microbial uptake. Community composition at the bed edge also diverged between SDI and FI, favoring Actinobacteria in the former and Acidobacteria and Gemmatimonadetes in the latter. Regardless of irrigation type, dry areas of the bed had the highest alpha diversity indices. Response to SDI was similar in organic and conventional systems, though organic had higher MBC, DOC, and relative abundance of Proteobacteria and fungal lipids, regardless of irrigation.Prolonged dry conditions in SDI appeared to limit microbial access to resources and changed community composition. As seen in non-agricultural systems, the severity and frequency of moisture changes, adaptation of the communities, and resource availability affect microbial response. Decoupling of C and N pools in dry surface soils under SDI may increase the potential for losses of DOC and nitrate with the first winter rains in this Mediterranean climate.
灌溉管理极大地改变了土壤水分的供应和分布,并可能对土壤微生物群落以及碳(C)和氮(N)循环产生影响,其程度甚至超过在雨水灌溉系统中观察到的影响。在加利福尼亚的地中海农业生态系统中采用地表下滴灌(SDI)可带来农艺效益,但只能湿润根区附近的部分土壤,其余部分在整个生长季节都处于干燥状态。相比之下,传统的沟灌(FI)具有周期性湿润的特点,水分分布更均匀。在加利福尼亚州的一项田间试验中,我们比较了 SDI 和 FI 对微生物群落的影响,并评估了长期有机和常规管理系统对结果的影响。在整个生长季节,我们在两个深度(0-15 厘米、15-30 厘米)和距离床中心滴灌带的三个距离(10 厘米、25 厘米、45 厘米)采集了土壤样本。收获时,使用 SDI 灌溉的土壤表面的微生物生物量 C(MBC)低于使用 FI 灌溉的土壤,而且相对于床边的 MBC,床边的可溶性 C 和 N 有所增加,这表明微生物的吸收减少了。在 SDI 和灌溉条件下,床边的群落组成也有所不同,前者偏向于放线菌,后者偏向于酸性杆菌和宝石花菌。无论灌溉类型如何,河床的干燥区域具有最高的阿尔法多样性指数。有机系统和常规系统对 SDI 的反应相似,但有机系统的 MBC、DOC 以及变形菌和真菌脂质的相对丰度更高,与灌溉类型无关。正如在非农业系统中看到的那样,湿度变化的严重程度和频率、群落的适应性以及资源的可用性都会影响微生物的反应。在 SDI 条件下,干燥表层土壤中的碳库和氮库脱钩可能会增加地中海气候下第一场冬雨时 DOC 和硝酸盐损失的可能性。
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引用次数: 0
Mitigating CO2 emissions from cultivated peatlands: Efficiency of straws and wood chips applications in maintaining carbon stock in two contrasting soils 减少栽培泥炭地的二氧化碳排放:秸秆和木屑在两种不同土壤中维持碳储量的效率
Q3 SOIL SCIENCE Pub Date : 2023-11-09 DOI: 10.3389/fsoil.2023.1285964
Karolane Bourdon, Josée Fortin, Jacynthe Dessureault-Rompré, Christophe Libbrecht, Jean Caron
Repeated applications of straw and wood chips were recently proposed as a conservation strategy for preserving cultivated peatland carbon (C) stock. However, the variability in the amendment biostability and the possible divergent responses of contrasting peat soils need to be assessed. This study investigated the effect of amendment with different plant materials on carbon dioxide (CO2) emissions from two contrasting peat soils (sapric and hemic) in two laboratory experiments. The sapric soil received one application of plant materials and was incubated for 3190 degree-days (145 days at 22°C), while the hemic soil received three successive applications of plant materials and was incubated for three successive periods of 3150 degree-days (126 days at 25°C). CO2 emissions were measured at time intervals ranging from 2 to 14 days and the apparent proportion of the plant material’s C remaining in the soil was modeled using an exponential decay function. CO2 emissions from the 0-25 cm horizon of the unamended peats represented 0.7 t C-CO2 ha-1 yr-1 in the sapric soil and 7.3, 1.1, and 0.5 t C-CO2 ha-1 yr-1 in the hemic soil for the first, second, and third amendment periods, respectively. The apparent remaining C of the plant material varied from 52% to 81% in the two experiments, resulting in biomass requirements ranging from 2 to 32 t ha-1. The apparent remaining C was from 26% to 36% higher in the sapric soil than in the hemic soil. The apparent remaining C was also 9% to 38% higher for the treated softwoods than the untreated materials (straws: miscanthus, switchgrass, sorghum; wood chips: willow, birch). The repeated application of straw and wood chips increased CO2 emissions in the first 35 days following each application, resulting in an increased decomposition rate for the tested model. However, no change was detected for the final apparent remaining C across the three applications. These findings highlight the importance of considering soil properties, material types, and the impact of repeated applications for designing effective amendment programs and accurate C projection models for cultivated peatlands.
秸秆和木屑的重复施用被认为是保护泥炭地碳储量的一种保护策略。然而,在修正生物稳定性的变异性和不同泥炭土可能的不同反应需要评估。本研究在两个实验室实验中研究了不同植物材料对两种不同泥炭土(含盐酸盐和含盐酸盐)二氧化碳排放的影响。含盐量土壤连续施用1次植物材料,培养3190度(22℃下145天);含盐量土壤连续施用3次植物材料,连续培养3次,培养3150度(25℃下126天)。每隔2天至14天测量一次二氧化碳排放量,并使用指数衰减函数对植物材料中碳在土壤中残留的表观比例进行建模。在第一次、第二次和第三次修正期间,未修正泥炭地0-25 cm层的CO 2排放量分别为:甜土的0.7 t C-CO 2 ha -1 yr -1和化学土的7.3、1.1和0.5 t C-CO 2 ha -1 yr -1。在两个试验中,植物材料的表观剩余C在52% ~ 81%之间变化,导致生物量需求在2 ~ 32 t ha -1之间。盐碱土壤的表观剩余碳含量比化学土壤高26% ~ 36%。处理过的软木的表观剩余碳含量也比未处理的材料(秸秆:芒草、柳枝稷、高粱;木屑:柳木、桦木)。重复施用秸秆和木屑在每次施用后的前35天内增加了二氧化碳排放量,导致被测模型的分解率增加。但是,在三个应用程序中,没有检测到最后的明显剩余C的变化。这些发现强调了考虑土壤性质、物质类型和重复应用对设计有效的改良方案和精确的C投影模型的重要性。
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引用次数: 0
The role of soil ecosystem services in the circular bioeconomy 土壤生态系统服务在循环生物经济中的作用
Q3 SOIL SCIENCE Pub Date : 2023-11-02 DOI: 10.3389/fsoil.2023.1209100
M. A. N. Anikwe, K Ife
The concept of a circular bioeconomy focuses on the sustainable use of biological resources, minimizing waste and negative environmental impacts. Soil ecosystem services are crucial in this context as they support agricultural production, biodiversity conservation, and nutrient recycling. The circular bioeconomy offers benefits like resource efficiency, reduced waste, lower environmental impacts, and economic opportunities, with soil ecosystem services playing a significant role in achieving these benefits. Soil provides various services for human well-being, including security, protection from ecological shocks, access to balanced diets, clean water, clean air, and energy for temperature control. This review highlights the importance of soil ecosystem services in circular resource management and bio-based sustainable production systems. These services encompass provisioning, regulating, cultural, and supporting roles, providing resources like food, fibre, and fuel, controlling erosion and temperature, offering aesthetic value, and sustaining plant and animal diversity. The bioeconomy comprises knowledge, research, technology, and innovation related to biological resource production, use, conservation, and regeneration. The application of circular bioeconomy strategies benefits from the ecological services soil provides to bio-based industries. The policy that converts farming, grazing, and woodland systems into renewable operations is bound to protect soil functions while relieving pressure on other critical ecosystem functions. Overall, a holistic understanding of soil ecosystem services is crucial for successfully implementing circular practices across different bioeconomy sectors. Soil conservation, sustainable management, and the protection of soil resources are vital for maintaining the services that support a circular bioeconomy.
循环生物经济的概念侧重于生物资源的可持续利用,最大限度地减少浪费和对环境的负面影响。在这种情况下,土壤生态系统服务至关重要,因为它们支持农业生产、生物多样性保护和养分循环。循环生物经济提供了资源效率、减少浪费、降低环境影响和经济机会等效益,土壤生态系统服务在实现这些效益方面发挥了重要作用。土壤为人类福祉提供各种服务,包括安全、免受生态冲击、获得均衡的饮食、清洁的水、清洁的空气和控制温度的能源。本文综述了土壤生态系统服务在循环资源管理和基于生物的可持续生产系统中的重要性。这些服务包括供应、调节、文化和支持作用,提供食物、纤维和燃料等资源,控制侵蚀和温度,提供审美价值,维持植物和动物的多样性。生物经济包括与生物资源的生产、利用、保护和再生有关的知识、研究、技术和创新。循环生物经济战略的应用得益于土壤为生物基产业提供的生态服务。将农业、放牧和林地系统转变为可再生经营的政策必然会保护土壤功能,同时减轻对其他关键生态系统功能的压力。总体而言,全面了解土壤生态系统服务对于在不同生物经济部门成功实施循环实践至关重要。土壤保持、可持续管理和土壤资源保护对于维持支持循环生物经济的服务至关重要。
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引用次数: 0
Use of hardwood mulch applications to improve soil characteristics of Alfisols used in Florida citrus production 使用硬木覆盖改善佛罗里达柑橘生产中Alfisols的土壤特性
Q3 SOIL SCIENCE Pub Date : 2023-10-09 DOI: 10.3389/fsoil.2023.1200847
Lukas M. Hallman, John M. Santiago, John-Paul Fox, Marco Pitino, Robert G. Shatters, Lorenzo Rossi
Introduction Improving soil fertility is a top priority in Florida’s citrus growing regions, especially in the age of Huanglongbing (HLB; also known as citrus greening). This disease severely reduces fine root mass, causes higher incidences of nutrient deficiencies, and eventually results in the death of affected trees. Additionally, the soils commonly found in Florida’s citrus growing regions are sandy (greater than 98%) and naturally low in fertility, making the nutrient management of HLB-affected trees even more challenging. As a result, interest in organic amendments to increase soil fertility are being tested. Although hardwood chip mulches are successfully used in other regions of the country, no studies exist observing their use on the soils in Florida’s citrus growing regions; therefore, the objectives of this study were to measure the impacts of hardwood oak mulch on (i) Florida Alfisols characteristics and (ii) HLB-affected citrus trees. Methods A two-treatment field study using 6-year-old ‘Valencia’ sweet orange trees ( Citrus × sinensis ) grafted on US-812 ( C. reticulata × C. trifoliata ) rootstock was conducted in Florida’s Indian River District (IRD). The experimental treatment consisted of 0.08 m of hardwood chip mulch sourced from oak trees applied every September for 3 years (2020, 2021, and 2022) while the control treatment had no mulch applied. Soil chemical and physical properties, leaf nutrient concentration, and leaf Candidatus Liberibacter asiaticus ( C Las) titer was collected in the fall (October), winter (January), spring (April), and summer (July). Results and discussion Overall, after 3 years, oak mulch applications increased soil available phosphorus (32%), potassium (66%), magnesium (71%), organic matter (49%), and moisture (25-88%, depending on the season); however, oak mulch inconsistently impacted leaf nutrient concentrations and was not effective at suppressing HLB. The results show that annual applications of hardwood oak mulch can improve the chemical and physical properties of sandy soils within three years, however, these improvements did not reduce the severity of HLB.
提高土壤肥力是佛罗里达州柑橘产区的首要任务,特别是在黄龙冰(HLB;也被称为柑橘绿化)。这种疾病严重减少细根质量,造成营养缺乏的较高发生率,并最终导致受影响树木的死亡。此外,佛罗里达州柑橘种植区的土壤通常是沙质的(大于98%),肥力自然较低,这使得受hlb影响的树木的养分管理更具挑战性。因此,人们对提高土壤肥力的有机改良剂的兴趣正在受到考验。尽管硬木片地膜在美国其他地区已经成功使用,但没有研究观察它们在佛罗里达州柑橘种植区的土壤上的使用情况;因此,本研究的目的是测量硬木橡木覆盖对(i)佛罗里达Alfisols特性和(ii)受hlb影响的柑橘树的影响。方法在美国佛罗里达州印第安河区(IRD)进行6年生‘瓦伦西亚’甜橙树(Citrus x sinensis)嫁接US-812 (C. reticulata × C. trifoliata)砧木的田间试验。试验处理包括每年9月覆盖0.08米的橡树硬木片地膜,为期3年(2020年、2021年和2022年),而对照处理不覆盖地膜。分别于秋季(10月)、冬季(1月)、春季(4月)和夏季(7月)采集土壤理化性质、叶片养分浓度和叶片亚洲解放候选菌(C Las)滴度。总体而言,3年后,橡木覆盖增加了土壤有效磷(32%)、钾(66%)、镁(71%)、有机质(49%)和水分(25-88%,具体取决于季节);然而,橡木覆盖对叶片养分浓度的影响不一致,对抑制HLB没有效果。结果表明:在3年内,每年施用阔叶栎树地膜可改善沙质土壤的理化性质,但并不能降低沙质土壤的严重程度。
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引用次数: 1
Artificial intelligence unveils key interactions between soil properties and climate factors on Boletus edulis and B. reticulatus mycelium in chestnut orchards of different ages 人工智能揭示了土壤性质和气候因素对栗树不同树龄栗树酵母菌和网纹酵母菌丝体的关键相互作用
Q3 SOIL SCIENCE Pub Date : 2023-10-06 DOI: 10.3389/fsoil.2023.1159793
Serena Santolamazza-Carbone, Laura Iglesias-Bernabé, Mariana Landin, Elena Benito Rueda, M. Esther Barreal, Pedro Pablo Gallego
The main objective of this study was to determine the possible interaction of two important abiotic factors (soil and climate) on the mycelial concentration and frequency of the ectomycorrhizal fungi Boletus edulis and B. reticulatus , using traditional statistics and artificial neural network tools. The frequency and concentration of Boletus mycelium were determined over three months (September, October, and November), and two years (2018 and 2020), in three hybrid chestnuts ( Castanea × coudercii) orchards of 40-, 10-, and 3- years-old, using real-time qPCR. Statistical analysis revealed a significant effect of the year on B. edulis mycelium concentration and of the sampling plot (different tree ages) on B. reticulatus frequency. The combination of artificial intelligence networks (ANN) with fuzzy logic, named neurofuzzy logic (NF), allowed the construction of two robust models. In the first, using year, month, and sampling plot as inputs, NF identified hidden interactions between year and month on B. edulis mycelium concentration and between sampling plot and sampling month on B. reticulatus mycelium frequency, thus improving the information obtained from the statistical analysis. In the second model, those three factors were disaggregated into 44 inputs, including 20 soil properties and 24 climatic factors, being NF able to select only 8 as critical factors to explain the variability found in both ectomycorrhizal Boletus species regarding mycelial frequency and concentration. Specifically, NF selected two chemical soil properties (cation exchange capacity and total carbon) and three physical properties (macroaggregates, total porosity, and soil moisture at field capacity), as well as their interactions with three climatic elements (cumulative difference between precipitation and potential evapotranspiration (P-PET-1-2) and water deficit (WD-1-2) in the previous two months and excess water (WE-1) in the month prior to sampling. These results provide a much deeper understanding and new insights into the ecology and the role of abiotic factors which explain the different mycelial development patterns of ectomycorrhizal fungi such as B. edulis and B. reticulatus in chestnut agroecosystems.
本研究主要目的是利用传统统计和人工神经网络工具,确定两个重要的非生物因子(土壤和气候)对外生菌根真菌Boletus edulis和B. reticulatus菌丝浓度和频率的可能相互作用。采用实时荧光定量pcr技术,对3个40岁、10岁和3岁的板栗(Castanea × coudercii)果园中Boletus菌丝体的频率和浓度进行了为期3个月(9月、10月和11月)和2年(2018年和2020年)的测定。统计分析表明,年份对毛竹菌丝体浓度有显著影响,采样样地(不同树龄)对毛竹频率有显著影响。人工智能网络(ANN)与模糊逻辑的结合,称为神经模糊逻辑(NF),允许构建两个鲁棒模型。首先,利用年、月、样地作为输入,NF识别了毛竹菌丝浓度的年、月、样地菌丝频率的月、样地菌丝频率的隐含交互作用,提高了统计分析所得信息的准确性。在第二个模型中,这三个因素被分解为44个输入,包括20个土壤性质和24个气候因素,NF只能选择8个关键因素来解释两种外生菌根Boletus物种在菌丝频率和浓度方面的差异。具体而言,NF选择了土壤的两种化学性质(阳离子交换容量和总碳)和三种物理性质(大团聚体、总孔隙度和土壤水分),以及它们与前两个月降水与潜在蒸散的累积差(P-PET-1-2)和水分亏缺(pd -1-2)以及采样前一个月水分过剩(WE-1)三个气候要素的相互作用。这些结果对板栗农业生态系统中外生菌根真菌(如B. edulis和B. reticulatus)不同菌丝发育模式的生态学和非生物因子的作用有了更深入的认识和新的认识。
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引用次数: 0
Corrigendum: Nitrogen fertilizer driven nitrous and nitric oxide production is decoupled from microbial genetic potential in low carbon, semi-arid soil 勘误:在低碳半干旱土壤中,氮肥驱动的氮和一氧化氮生产与微生物遗传潜力脱钩
Q3 SOIL SCIENCE Pub Date : 2023-09-22 DOI: 10.3389/fsoil.2023.1283367
Mark D. McDonald, Katie L. Lewis, Paul B. DeLaune, Brian A. Hux, Thomas W. Boutton, Terry J. Gentry
Corrigendum on: McDonald, M.D., Lewis, K.L., Delaune, P.B., Hux, B.A., Boutton, T.W., and Gentry, T.J. (2023). Nitrogen fertilizer driven nitrous and nitric oxide production is decoupled from microbial genetic potential in low carbon, semi-arid soil. Frontiers in Soil Science 2.Additional Affiliation(s)In the published article, there was an error regarding the affiliations for Mark D. McDonald. As well as having affiliations 1,2 they should also have Argonne National Laboratory, Lemont, IL, 60439, USA.The authors apologize for this error and state that this does not change the scientific conclusions of the article in any way. The original article has been updated.Error in Figure/TableIn the published article, there was an error in Table 1 as published. The primer sequences for the Target group 16S rRNA (Eub338: ATCATGGTSCTGCCGCG; Eub518: GCCTCGATCAGRTTGTGGTT) are incorrect. In addition, primer references for all target groups were incorrect in the final version of the manuscript. The corrected Table 1 and its caption Primer sequences and thermal profiles for total bacterial and bacterial N-cycle functional gene abundances appear below. The authors apologize for this error and state that this does not change the scientific conclusions of the article in any way. The original article has been updated.
更正:McDonald, m.d., Lewis, k.l., Delaune, p.b., Hux, b.a., Boutton, t.w.和Gentry, T.J.(2023)。在低碳半干旱土壤中,氮肥驱动的氮和一氧化氮生产与微生物遗传潜力脱钩。土壤科学前沿2。在发表的文章中,关于Mark D. McDonald的隶属关系有一个错误。除了拥有附属机构1,2,他们还应该拥有阿贡国家实验室,Lemont, IL, 60439, USA。作者为这个错误道歉,并声明这不会以任何方式改变文章的科学结论。原文已更新。在发表的文章中,发表的表1中有一个错误。目的组16S rRNA引物序列(Eub338: ATCATGGTSCTGCCGCG;Eub518: GCCTCGATCAGRTTGTGGTT)是不正确的。此外,在手稿的最终版本中,所有目标群体的引物参考文献都不正确。修正后的表1及其标题引物序列和细菌总丰度和细菌n环功能基因丰度的热谱如下所示。作者为这个错误道歉,并声明这不会以任何方式改变文章的科学结论。原文已更新。
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引用次数: 0
Artificial network inference analysis reveals the impact of biostimulant on bacterial communities in fumigated soil for potato production against common scab 人工网络推理分析揭示了生物刺激素对马铃薯熏蒸土壤细菌群落的影响
Q3 SOIL SCIENCE Pub Date : 2023-09-12 DOI: 10.3389/fsoil.2023.1208909
Honoré Tekeu, Thomas Jeanne, Joël D’Astous-Pagé, Richard Hogue
Introduction and methods As part of a study on control methods of common scab disease impact on potato yield and quality, high-throughput sequencing was used to measure the effects of soil fumigant chloropicrin alone or in combination with a Bacillus species-based biostimulant on soil bacterial diversity in terms of richness and composition, as well as on soil bacterial network interactions. Results and discussion The results showed that common scab caused significant net yield losses of more than 46.25% in potatoes of control plots (T1), while the use of the fumigant alone (T3) and the use of the fumigant with the biostimulant (T4) reduced net yield losses to less than 2.5%. These treatments also promoted gross yield increases of 23.5 cwt. acre -1 (7.06%) and 28 cwt. acre -1 (8.41%) respectively. The study found that using the soil fumigant chloropicrin significantly and persistently altered the composition of the soil bacterial community over the growing season. The modifications of the soil bacterial community induced by the inoculation of the Bacillus species-based biostimulant are distinct by the end of the growing season depending on whether the soil has been fumigated (T4) or not (T2). Interestingly, artificial network inference analysis showed that the T2 treatment had the highest number of edges and linkages, contrary to the T3 treatment that had the lowest number of edges and linkages. The fumigation alone treatment leads to a reduction in interactions, while the application of the biostimulant, in both non-fumigated and fumigated soil, results in increased interactions and a higher number of connections within a phylum or between different taxa. Furthermore, the treatment combining the fumigant and the biostimulant exhibits a moderate increase in various network properties, providing evidence for the positive effect of biostimulant inoculation on bacterial communities in fumigated soils. Our results provide a more detailed understanding of the bacterial community structure and diversity in the soil of the different treatments. Moreover, deciphering network interactions in soil bacterial communities is fundamentally important for research in soil microbial ecology of potato cropping systems.
作为马铃薯常见赤霉病对马铃薯产量和品质影响控制方法研究的一部分,采用高通量测序方法测定了土壤熏蒸剂氯霉素单独使用或与一种芽孢杆菌属生物刺激素联合使用对土壤细菌多样性的丰富度和组成,以及土壤细菌网络相互作用的影响。结果与讨论结果表明,在对照区(T1)马铃薯中,普通赤霉病造成的净产量损失大于46.25%,而单独使用熏蒸剂(T3)和与生物刺激素(T4)联合使用熏蒸剂可使净产量损失小于2.5%。这些处理也促进了总产量增加23.5英担。Acre -1(7.06%)和28 cwt。Acre -1(8.41%)。研究发现,使用土壤熏蒸剂氯丁显著且持续地改变了整个生长季节土壤细菌群落的组成。接种基于芽孢杆菌种的生物刺激素引起的土壤细菌群落的变化在生长季节结束时是不同的,这取决于土壤是否经过熏蒸(T4) (T2)。有趣的是,人工网络推理分析显示,T2处理的边和连杆数最多,而T3处理的边和连杆数最少。单独熏蒸处理导致相互作用减少,而在未熏蒸和熏蒸的土壤中应用生物刺激剂,导致相互作用增加,门内或不同分类群之间的联系数量增加。此外,熏蒸剂和生物刺激素联合处理显示出各种网络特性的适度增加,这为接种生物刺激素对熏蒸土壤细菌群落的积极影响提供了证据。我们的结果提供了对不同处理土壤中细菌群落结构和多样性的更详细的了解。此外,破译土壤细菌群落的网络相互作用对马铃薯种植系统土壤微生物生态的研究具有重要意义。
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引用次数: 0
Addressing the effects of soil organic carbon on water retention in US Pacific Northwest wheat–soil systems 美国太平洋西北部小麦-土壤系统土壤有机碳对保水性的影响
Q3 SOIL SCIENCE Pub Date : 2023-08-21 DOI: 10.3389/fsoil.2023.1233886
Paulina B. Ramírez, S. Machado, Surendra Singh, Rachael Plunkett, F. Calderón
Soil organic carbon (SOC) is considered a significant contributor to soil water retention. However, generalizations about the role of SOC in available water-holding capacity (AWHC) may have inaccurately portrayed this relationship. We aim to reexamine the relationship between SOC and water retention using the National Cooperative Soil Survey (NCSS) Database. We focus on regional soil groups within the Pacific Northwest wheat production region, including Haploxerolls, Argixerolls, Haplocambids, and Durixerolls. We evaluated 77 sites based on SOC, total nitrogen (TN), pH, texture, bulk density (BD), field capacity (FC), permanent wilting point (PWP), and AWHC. Our findings indicate that texture and BD were the most significant contributors to AWHC variation, while SOC played a secondary role in explaining this variation. Mid-infrared (MIR) spectroscopy coupled with a random forest (RF) algorithm was used to evaluate the importance of spectral bands in determining changes in FC and PWP. This analysis identified mineral bands related to inner-surface hydroxyl groups in kaolinite (3700 cm −1) and Si-O-Si overtones (1870 cm −1) as the most important spectral contributors to PWP. The water retention at FC was associated with organic absorbances relevant to soil aggregation, such as polysaccharide C–O (~1035 cm −1), while mineral bands were relatively less influential. This study highlights the need to reexamine the impact of SOC as well as the interaction between soil texture and compaction on soil water retention to elucidate the underlying mechanisms responsible for AWHC, thus providing insight into future drought adaptation strategies.
土壤有机碳(SOC)被认为是土壤保水的重要贡献者。然而,关于SOC在有效持水量(AWHC)中的作用的概括可能不准确地描述了这种关系。我们的目的是使用国家合作土壤调查(NCSS)数据库重新检查SOC和保水性之间的关系。我们关注太平洋西北部小麦生产区内的区域土壤群,包括Haploxerols、Argixerols、Haplocambids和Durixerols。我们根据SOC、总氮(TN)、pH、质地、堆积密度(BD)、田间容量(FC)、永久萎蔫点(PWP)和AWHC对77个地点进行了评估。我们的研究结果表明,质地和BD是AWHC变化的最重要因素,而SOC在解释这种变化中起着次要作用。中红外(MIR)光谱与随机森林(RF)算法相结合,用于评估光谱带在确定FC和PWP变化中的重要性。该分析确定,高岭石(3700 cm−1)和Si-O-Si泛音(1870 cm−2)中与内表面羟基相关的矿物带是PWP最重要的光谱贡献者。FC的保水性与与土壤聚集相关的有机吸收有关,如多糖C–O(~1035 cm−1),而矿物带的影响相对较小。这项研究强调,有必要重新审视SOC的影响以及土壤质地和压实度对土壤保水性的相互作用,以阐明AWHC的潜在机制,从而为未来的干旱适应策略提供见解。
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引用次数: 0
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