Pub Date : 2024-12-01DOI: 10.1107/S2052520624010461
Carolyn P Brock, Anthony Michael Glazer
A special issue of Acta Crystallographica Section B reports the great progress made recently in the determination, reporting, and archiving of magnetic structures, of which there are now more than 2000. The infrastructure needed to support the field is now in place. The special issue also highlights new science made possible by these developments.
{"title":"Magnetic crystallography comes of age.","authors":"Carolyn P Brock, Anthony Michael Glazer","doi":"10.1107/S2052520624010461","DOIUrl":"https://doi.org/10.1107/S2052520624010461","url":null,"abstract":"<p><p>A special issue of Acta Crystallographica Section B reports the great progress made recently in the determination, reporting, and archiving of magnetic structures, of which there are now more than 2000. The infrastructure needed to support the field is now in place. The special issue also highlights new science made possible by these developments.</p>","PeriodicalId":7320,"journal":{"name":"Acta crystallographica Section B, Structural science, crystal engineering and materials","volume":" ","pages":""},"PeriodicalIF":1.3,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142765337","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-12-01DOI: 10.1107/S2052520624002774
R Alex Mayo, Alastair J A Price, Alberto Otero-de-la-Roza, Erin R Johnson
The seventh blind test of crystal structure prediction (CSP) methods substantially increased the level of complexity of the target compounds relative to the previous tests organized by the Cambridge Crystallographic Data Centre. In this work, the performance of density-functional methods is assessed using numerical atomic orbitals and the exchange-hole dipole moment dispersion correction (XDM) for the energy-ranking phase of the seventh blind test. Overall, excellent performance was seen for the two rigid molecules (XXVII, XXVIII) and for the organic salt (XXXIII). However, for the agrochemical (XXXI) and pharmaceutical (XXXII) targets, the experimental polymorphs were ranked fairly high in energy amongst the provided candidate structures and inclusion of thermal free-energy corrections from the lattice vibrations was found to be essential for compound XXXI. Based on these results, it is proposed that the importance of vibrational free-energy corrections increases with the number of rotatable bonds.
{"title":"Assessment of the exchange-hole dipole moment dispersion correction for the energy ranking stage of the seventh crystal structure prediction blind test.","authors":"R Alex Mayo, Alastair J A Price, Alberto Otero-de-la-Roza, Erin R Johnson","doi":"10.1107/S2052520624002774","DOIUrl":"10.1107/S2052520624002774","url":null,"abstract":"<p><p>The seventh blind test of crystal structure prediction (CSP) methods substantially increased the level of complexity of the target compounds relative to the previous tests organized by the Cambridge Crystallographic Data Centre. In this work, the performance of density-functional methods is assessed using numerical atomic orbitals and the exchange-hole dipole moment dispersion correction (XDM) for the energy-ranking phase of the seventh blind test. Overall, excellent performance was seen for the two rigid molecules (XXVII, XXVIII) and for the organic salt (XXXIII). However, for the agrochemical (XXXI) and pharmaceutical (XXXII) targets, the experimental polymorphs were ranked fairly high in energy amongst the provided candidate structures and inclusion of thermal free-energy corrections from the lattice vibrations was found to be essential for compound XXXI. Based on these results, it is proposed that the importance of vibrational free-energy corrections increases with the number of rotatable bonds.</p>","PeriodicalId":7320,"journal":{"name":"Acta crystallographica Section B, Structural science, crystal engineering and materials","volume":" ","pages":""},"PeriodicalIF":1.3,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11789164/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142455727","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-12-01DOI: 10.1107/S2052520624005043
Gregory J O Beran, Cameron J Cook, Pablo A Unzueta
Accurate modeling of conformational energies is key to the crystal structure prediction of conformational polymorphs. Focusing on molecules XXXI and XXXII from the seventh blind test of crystal structure prediction, this study employs various electronic structure methods up to the level of domain-local pair natural orbital coupled cluster singles and doubles with perturbative triples [DLPNO-CCSD(T1)] to benchmark the conformational energies and to assess their impact on the crystal energy landscapes. Molecule XXXI proves to be a relatively straightforward case, with the conformational energies from generalized gradient approximation (GGA) functional B86bPBE-XDM changing only modestly when using more advanced density functionals such as PBE0-D4, ωB97M-V, and revDSD-PBEP86-D4, dispersion-corrected second-order Møller-Plesset perturbation theory (SCS-MP2D), or DLPNO-CCSD(T1). In contrast, the conformational energies of molecule XXXII prove difficult to determine reliably, and variations in the computed conformational energies appreciably impact the crystal energy landscape. Even high-level methods such as revDSD-PBEP86-D4 and SCS-MP2D exhibit significant disagreements with the DLPNO-CCSD(T1) benchmarks for molecule XXXII, highlighting the difficulty of predicting conformational energies for complex, drug-like molecules. The best-converged predicted crystal energy landscape obtained here for molecule XXXII disagrees significantly with what has been inferred about the solid-form landscape experimentally. The identified limitations of the calculations are probably insufficient to account for the discrepancies between theory and experiment on molecule XXXII, and further investigation of the experimental solid-form landscape would be valuable. Finally, assessment of several semi-empirical methods finds r2SCAN-3c to be the most promising, with conformational energy accuracy intermediate between the GGA and hybrid functionals and a low computational cost.
{"title":"Contrasting conformational behaviors of molecules XXXI and XXXII in the seventh blind test of crystal structure prediction.","authors":"Gregory J O Beran, Cameron J Cook, Pablo A Unzueta","doi":"10.1107/S2052520624005043","DOIUrl":"10.1107/S2052520624005043","url":null,"abstract":"<p><p>Accurate modeling of conformational energies is key to the crystal structure prediction of conformational polymorphs. Focusing on molecules XXXI and XXXII from the seventh blind test of crystal structure prediction, this study employs various electronic structure methods up to the level of domain-local pair natural orbital coupled cluster singles and doubles with perturbative triples [DLPNO-CCSD(T1)] to benchmark the conformational energies and to assess their impact on the crystal energy landscapes. Molecule XXXI proves to be a relatively straightforward case, with the conformational energies from generalized gradient approximation (GGA) functional B86bPBE-XDM changing only modestly when using more advanced density functionals such as PBE0-D4, ωB97M-V, and revDSD-PBEP86-D4, dispersion-corrected second-order Møller-Plesset perturbation theory (SCS-MP2D), or DLPNO-CCSD(T1). In contrast, the conformational energies of molecule XXXII prove difficult to determine reliably, and variations in the computed conformational energies appreciably impact the crystal energy landscape. Even high-level methods such as revDSD-PBEP86-D4 and SCS-MP2D exhibit significant disagreements with the DLPNO-CCSD(T1) benchmarks for molecule XXXII, highlighting the difficulty of predicting conformational energies for complex, drug-like molecules. The best-converged predicted crystal energy landscape obtained here for molecule XXXII disagrees significantly with what has been inferred about the solid-form landscape experimentally. The identified limitations of the calculations are probably insufficient to account for the discrepancies between theory and experiment on molecule XXXII, and further investigation of the experimental solid-form landscape would be valuable. Finally, assessment of several semi-empirical methods finds r<sup>2</sup>SCAN-3c to be the most promising, with conformational energy accuracy intermediate between the GGA and hybrid functionals and a low computational cost.</p>","PeriodicalId":7320,"journal":{"name":"Acta crystallographica Section B, Structural science, crystal engineering and materials","volume":" ","pages":""},"PeriodicalIF":1.3,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11789167/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142455728","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-12-01DOI: 10.1107/S2052520624010436
Arthur Ballato, John Ballato
Averaging of material coefficients of crystallites deposited at an angle to a rotating substrate is considered. A simple model is proposed, and applied to determine effective linear dielectric, piezoelectric, and elastic constants of all Laue groups. While these represent tensors of rank 2, 3, and 4, the method applies generally to tensors of any rank. Results are then particularized for 6mm point symmetry crystals, and applied numerically to zinc oxide, ZnO. It is shown that, by means of the rotating substrate method, depositions may be achieved having the equivalent of hexagonal anisotropy, enabling the creation of `engineered' structures.
{"title":"Seed layer formation by deposition of microcrystallites on a revolving substrate: modeling of the effective linear elastic, piezoelectric, and dielectric coefficients.","authors":"Arthur Ballato, John Ballato","doi":"10.1107/S2052520624010436","DOIUrl":"10.1107/S2052520624010436","url":null,"abstract":"<p><p>Averaging of material coefficients of crystallites deposited at an angle to a rotating substrate is considered. A simple model is proposed, and applied to determine effective linear dielectric, piezoelectric, and elastic constants of all Laue groups. While these represent tensors of rank 2, 3, and 4, the method applies generally to tensors of any rank. Results are then particularized for 6mm point symmetry crystals, and applied numerically to zinc oxide, ZnO. It is shown that, by means of the rotating substrate method, depositions may be achieved having the equivalent of hexagonal anisotropy, enabling the creation of `engineered' structures.</p>","PeriodicalId":7320,"journal":{"name":"Acta crystallographica Section B, Structural science, crystal engineering and materials","volume":" ","pages":""},"PeriodicalIF":1.3,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11789169/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142765414","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-10-01Epub Date: 2024-09-06DOI: 10.1107/S2052520624007017
Anne Vernière, Léopold V B Diop, Ibrahima Sarr, Thierry Schweitzer, Bernard Malaman
The discovery of novel quaternary intermetallic compounds R2MoSi2C (R = Y, Gd) in the R-Mo-Si-C system is reported. Their crystal structure was investigated using single-crystal X-ray diffraction. It is shown that the Y2MoSi2C and Gd2MoSi2C compounds crystallize in the tetragonal space group P4/mbm (Pearson symbol tP12) with unit-cell parameters a = 6.9525 (18) Å, c = 4.1962 (16) Å, and a = 6.9945 (16) Å, c = 4.2020 (14) Å, respectively.
报告发现了 R-Mo-Si-C 系统中的新型四元金属间化合物 R2MoSi2C(R = Y、Gd)。利用单晶 X 射线衍射研究了它们的晶体结构。结果表明,Y2MoSi2C 和 Gd2MoSi2C 化合物在四方空间群 P4/mbm(皮尔逊符号 tP12)中结晶,单位晶胞参数分别为 a = 6.9525 (18) Å、c = 4.1962 (16) Å 和 a = 6.9945 (16) Å、c = 4.2020 (14) Å。
{"title":"Crystal structure of new quaternary intermetallic compounds R<sub>2</sub>MoSi<sub>2</sub>C (R = Y, Gd).","authors":"Anne Vernière, Léopold V B Diop, Ibrahima Sarr, Thierry Schweitzer, Bernard Malaman","doi":"10.1107/S2052520624007017","DOIUrl":"10.1107/S2052520624007017","url":null,"abstract":"<p><p>The discovery of novel quaternary intermetallic compounds R<sub>2</sub>MoSi<sub>2</sub>C (R = Y, Gd) in the R-Mo-Si-C system is reported. Their crystal structure was investigated using single-crystal X-ray diffraction. It is shown that the Y<sub>2</sub>MoSi<sub>2</sub>C and Gd<sub>2</sub>MoSi<sub>2</sub>C compounds crystallize in the tetragonal space group P4/mbm (Pearson symbol tP12) with unit-cell parameters a = 6.9525 (18) Å, c = 4.1962 (16) Å, and a = 6.9945 (16) Å, c = 4.2020 (14) Å, respectively.</p>","PeriodicalId":7320,"journal":{"name":"Acta crystallographica Section B, Structural science, crystal engineering and materials","volume":" ","pages":"504-508"},"PeriodicalIF":1.3,"publicationDate":"2024-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142339157","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-10-01Epub Date: 2024-09-26DOI: 10.1107/S2052520624009041
Louise N Dawe, Ashwini Nangia
Introducing the new Section Editor for Acta Cryst. B.
介绍《晶体学报》(Acta Cryst.B.
{"title":"A new Section Editor for Acta Cryst. B.","authors":"Louise N Dawe, Ashwini Nangia","doi":"10.1107/S2052520624009041","DOIUrl":"https://doi.org/10.1107/S2052520624009041","url":null,"abstract":"<p><p>Introducing the new Section Editor for Acta Cryst. B.</p>","PeriodicalId":7320,"journal":{"name":"Acta crystallographica Section B, Structural science, crystal engineering and materials","volume":"80 Pt 5","pages":"361"},"PeriodicalIF":1.3,"publicationDate":"2024-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142455735","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-10-01Epub Date: 2024-09-03DOI: 10.1107/S2052520624006711
Angel Muñoz, Javier Gainza, Jian Shi Zhou, José Luis Martinez, Eva Céspedes, Maria Teresa Fernández-Díaz, José Antonio Alonso
A polycrystalline sample LuCrO3 has been characterized by neutron powder diffraction (NPD) and magnetization measurements. Its crystal structure has been Rietveld refined from NPD data in space group Pnma; this perovskite contains strongly tilted CrO6 octahedra with extremely bent Cr-O-Cr superexchange angles of ∼142°. The NPD data show that below Néel temperature (TN ≃ 131 K), the magnetic structure can be defined as an A-type antiferromagnetic arrangement of Cr3+ magnetic moments, aligned along the b axis, with a canting along the c axis. A noticeable magnetostrictive effect is observed in the unit-cell parameters and volume upon cooling down across TN. The AC magnetic susceptibility indicates the onset of magnetic ordering below 112.6 K; the magnetization isotherms below TN show a nonlinear behaviour that is associated with the described canting of the Cr3+ magnetic moments. From the Curie-Weiss law, the effective moment of the Cr3+ sublattice is found to be μeff = 3.55 μB (calculated 3.7 μB) while the ΘCW parameter yields a value of -155 K, indicating antiferromagnetic interactions. There is a conspicuous increase of TN upon the application of external pressure, which must be due to shortening of the Cr-O bond length under compression that increases the orbital overlap integral.
{"title":"New insights into the magnetism and magnetic structure of LuCrO<sub>3</sub> perovskite.","authors":"Angel Muñoz, Javier Gainza, Jian Shi Zhou, José Luis Martinez, Eva Céspedes, Maria Teresa Fernández-Díaz, José Antonio Alonso","doi":"10.1107/S2052520624006711","DOIUrl":"10.1107/S2052520624006711","url":null,"abstract":"<p><p>A polycrystalline sample LuCrO<sub>3</sub> has been characterized by neutron powder diffraction (NPD) and magnetization measurements. Its crystal structure has been Rietveld refined from NPD data in space group Pnma; this perovskite contains strongly tilted CrO<sub>6</sub> octahedra with extremely bent Cr-O-Cr superexchange angles of ∼142°. The NPD data show that below Néel temperature (T<sub>N</sub> ≃ 131 K), the magnetic structure can be defined as an A-type antiferromagnetic arrangement of Cr<sup>3+</sup> magnetic moments, aligned along the b axis, with a canting along the c axis. A noticeable magnetostrictive effect is observed in the unit-cell parameters and volume upon cooling down across T<sub>N</sub>. The AC magnetic susceptibility indicates the onset of magnetic ordering below 112.6 K; the magnetization isotherms below T<sub>N</sub> show a nonlinear behaviour that is associated with the described canting of the Cr<sup>3+</sup> magnetic moments. From the Curie-Weiss law, the effective moment of the Cr<sup>3+</sup> sublattice is found to be μ<sub>eff</sub> = 3.55 μ<sub>B</sub> (calculated 3.7 μ<sub>B</sub>) while the Θ<sub>CW</sub> parameter yields a value of -155 K, indicating antiferromagnetic interactions. There is a conspicuous increase of T<sub>N</sub> upon the application of external pressure, which must be due to shortening of the Cr-O bond length under compression that increases the orbital overlap integral.</p>","PeriodicalId":7320,"journal":{"name":"Acta crystallographica Section B, Structural science, crystal engineering and materials","volume":" ","pages":"377-384"},"PeriodicalIF":1.3,"publicationDate":"2024-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11457101/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142131593","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-10-01Epub Date: 2024-08-26DOI: 10.1107/S2052520624006607
Soorya Kabekkodu, Thomas Blanton
In recent years, there is a significant interest from the crystallographic and materials science communities to have access to raw diffraction data. The effort in archiving raw data for access by the user community is spearheaded by the International Union of Crystallography (IUCr) Committee on Data. In materials science, where powder diffraction is extensively used, the challenge in archiving raw data is different to that from single crystal data, owing to the very nature of the contributions involved. Powder diffraction (X-ray or neutron) data consist of contributions from the material under study as well as instrument specific parameters. Having raw powder diffraction data can be essential in cases of analysing materials with poor crystallinity, disorder, micro structure (size/strain) etc. Here, the initiative and progress made by the International Centre for Diffraction Data (ICDDR) in archiving powder X-ray diffraction raw data in the Powder Diffraction FileTM (PDFR) database is outlined. The upcoming 2025 release of the PDF-5+ database will have more than 20 800 raw powder diffraction patterns that are available for reference.
{"title":"Importance of powder diffraction raw data archival in a curated database for materials science applications.","authors":"Soorya Kabekkodu, Thomas Blanton","doi":"10.1107/S2052520624006607","DOIUrl":"10.1107/S2052520624006607","url":null,"abstract":"<p><p>In recent years, there is a significant interest from the crystallographic and materials science communities to have access to raw diffraction data. The effort in archiving raw data for access by the user community is spearheaded by the International Union of Crystallography (IUCr) Committee on Data. In materials science, where powder diffraction is extensively used, the challenge in archiving raw data is different to that from single crystal data, owing to the very nature of the contributions involved. Powder diffraction (X-ray or neutron) data consist of contributions from the material under study as well as instrument specific parameters. Having raw powder diffraction data can be essential in cases of analysing materials with poor crystallinity, disorder, micro structure (size/strain) etc. Here, the initiative and progress made by the International Centre for Diffraction Data (ICDD<sup>R</sup>) in archiving powder X-ray diffraction raw data in the Powder Diffraction File<sup>TM</sup> (PDF<sup>R</sup>) database is outlined. The upcoming 2025 release of the PDF-5+ database will have more than 20 800 raw powder diffraction patterns that are available for reference.</p>","PeriodicalId":7320,"journal":{"name":"Acta crystallographica Section B, Structural science, crystal engineering and materials","volume":" ","pages":"364-369"},"PeriodicalIF":1.3,"publicationDate":"2024-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11457107/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142103255","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-10-01Epub Date: 2024-09-02DOI: 10.1107/S2052520624006929
Aungkana Chatkon, Kenneth J Haller, Joseph P Haller
A hydrated salt of decavanadate containing diprotonated metforminium(2+) (H2Met2+), hydronium (H3O+) and either neutral biguanide (Bg) or monoprotonated guanylurea (HGU+) exhibits a previously seen complex charge-stabilized hydrogen-bonded network [Chatkon et al. (2022). Acta Cryst. B78, 798-808]. Charge balance is achieved in two ways through substitutional disorder: a 0.6 occupied HGU+ cation is paired with a V10O286- anion, and a 0.4 occupied neutral Bg molecule is paired with a HV10O285- anion, with the remaining charge in both cases balanced by two H2Met2+ dications and one H3O+ monocation. Bg/HGU+ moieties exhibit bifurcated N-H...O hydrogen bonding to the H3O+ cation and are substitutionally/positionally disordered along with the H3O+ cation about an inversion center. The HGU+ V10O286- synthon seen in the previous study occurs again. Bg exhibits bifurcated hydrogen bonding from two amino groups to two rows of cluster O atoms running diagonally across the equatorial plane of the HV10O285- anion with a return hydrogen bond from the cluster H atom to the imino N atom of the Bg. Thus, a Bg...cluster synthon similar to the HGU+...cluster synthon previously reported is found. The disordered moieties occupy spaces with excess volume in the 3-D network structure. Interestingly, when the crystallographic unit cell of the current compound, whose X-ray data was collected at 100 K, is compared with that of a previous compound exhibiting the same supramolecular framework, unit-cell parameter c does not shorten as a and b expectantly do because of the lower data collection temperature. The lack of contraction on unit-cell parameter c is possibly due to the supramolecular structure.
含有二质子化二甲双胍(2+) (H2Met2+)、氢铵 (H3O+) 和中性双胍 (Bg) 或单质子化鸟苷酸 (HGU+) 的癸钒酸盐水合盐显示出一种以前见过的复杂电荷稳定氢键网络[Chatkon 等人 (2022)。 晶体学报 B78,798-808]。电荷平衡通过两种方式实现:一个 0.6 占位的 HGU+ 阳离子与一个 V10O286- 阴离子配对,一个 0.4 占位的中性 Bg 分子与一个 HV10O285- 阴离子配对,两种情况下的剩余电荷均由两个 H2Met2+ 二阳离子和一个 H3O+ 一阳离子平衡。Bg/HGU+ 分子与 H3O+ 阳离子的 N-H...O 氢键分叉,并与 H3O+ 阳离子一起围绕一个反转中心发生置换/位置紊乱。上次研究中出现的 HGU+ V10O286- 合子再次出现。Bg 表现出从两个氨基到两排簇 O 原子的分叉氢键,这些氢键斜向穿过 HV10O285- 阴离子的赤道平面,并从簇 H 原子到 Bg 的亚氨基 N 原子形成返回氢键。因此,我们发现了一种 Bg...簇合子,类似于之前报道的 HGU+...簇合子。无序分子占据了三维网络结构中体积过大的空间。有趣的是,当前化合物的 X 射线数据是在 100 K 温度下采集的,当把它的晶体学单胞与之前具有相同超分子框架的化合物的晶体学单胞进行比较时,由于数据采集温度较低,单胞参数 c 并没有像预期的 a 和 b 一样缩短。单胞参数 c 没有收缩可能是超分子结构造成的。
{"title":"Substitutional/positional disorder of biguanide and guanylurea in the structure of a decavanadate complex [(Bg)(HV<sub>10</sub>O<sub>28</sub><sup>5-</sup>)]<sub>0.4</sub>[(HGU<sup>+</sup>)(V<sub>10</sub>O<sub>28</sub><sup>6-</sup>)]<sub>0.6</sub>(H<sub>2</sub>Met<sup>2+</sup>)<sub>2</sub>(H<sub>3</sub>O<sup>+</sup>)·8H<sub>2</sub>O.","authors":"Aungkana Chatkon, Kenneth J Haller, Joseph P Haller","doi":"10.1107/S2052520624006929","DOIUrl":"10.1107/S2052520624006929","url":null,"abstract":"<p><p>A hydrated salt of decavanadate containing diprotonated metforminium(2+) (H<sub>2</sub>Met<sup>2+</sup>), hydronium (H<sub>3</sub>O<sup>+</sup>) and either neutral biguanide (Bg) or monoprotonated guanylurea (HGU<sup>+</sup>) exhibits a previously seen complex charge-stabilized hydrogen-bonded network [Chatkon et al. (2022). Acta Cryst. B78, 798-808]. Charge balance is achieved in two ways through substitutional disorder: a 0.6 occupied HGU<sup>+</sup> cation is paired with a V<sub>10</sub>O<sub>28</sub><sup>6-</sup> anion, and a 0.4 occupied neutral Bg molecule is paired with a HV<sub>10</sub>O<sub>28</sub><sup>5-</sup> anion, with the remaining charge in both cases balanced by two H<sub>2</sub>Met<sup>2+</sup> dications and one H<sub>3</sub>O<sup>+</sup> monocation. Bg/HGU<sup>+</sup> moieties exhibit bifurcated N-H...O hydrogen bonding to the H<sub>3</sub>O<sup>+</sup> cation and are substitutionally/positionally disordered along with the H<sub>3</sub>O<sup>+</sup> cation about an inversion center. The HGU<sup>+</sup> V<sub>10</sub>O<sub>28</sub><sup>6-</sup> synthon seen in the previous study occurs again. Bg exhibits bifurcated hydrogen bonding from two amino groups to two rows of cluster O atoms running diagonally across the equatorial plane of the HV<sub>10</sub>O<sub>28</sub><sup>5-</sup> anion with a return hydrogen bond from the cluster H atom to the imino N atom of the Bg. Thus, a Bg...cluster synthon similar to the HGU<sup>+</sup>...cluster synthon previously reported is found. The disordered moieties occupy spaces with excess volume in the 3-D network structure. Interestingly, when the crystallographic unit cell of the current compound, whose X-ray data was collected at 100 K, is compared with that of a previous compound exhibiting the same supramolecular framework, unit-cell parameter c does not shorten as a and b expectantly do because of the lower data collection temperature. The lack of contraction on unit-cell parameter c is possibly due to the supramolecular structure.</p>","PeriodicalId":7320,"journal":{"name":"Acta crystallographica Section B, Structural science, crystal engineering and materials","volume":" ","pages":"456-466"},"PeriodicalIF":1.3,"publicationDate":"2024-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142103257","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-10-01Epub Date: 2024-08-30DOI: 10.1107/S2052520624007091
Anastasiia Smerechuk, Ana Guilherme Buzanich, Bernd Büchner, Sabine Wurmehl, Ryan Morrow
Magnetic materials featuring triangular arrangements of spins are frequently investigated as platforms hosting magnetic frustration. Hexagonal perovskites with ordered vacancies serve as excellent candidates for two-dimensional triangular magnetism due to the considerable separation of the magnetic planes. In this work, the effects of chemical pressure on the ferromagnetic ground state of Ba2La2NiW2O12 by substitution of Ba2+ with Sr2+ to produce Sr2La2NiW2O12 are investigated. The two materials are characterized using synchrotron-based XRD, XANES and EXAFS in addition to magnetometry in order to correlate their crystal structures and magnetic properties. Both materials form in space group R3, yet as a result of the enhanced bending of key bond angles due to the effects of chemical pressure, the TC value of the magnetic Ni2+ sublattice is reduced from ∼6 K in Ba2La2NiW2O12 to 4 K in Sr2La2NiW2O12.
{"title":"Synthesis and properties of Sr<sub>2</sub>La<sub>2</sub>NiW<sub>2</sub>O<sub>12</sub>, a new S = 1 triangular lattice magnet.","authors":"Anastasiia Smerechuk, Ana Guilherme Buzanich, Bernd Büchner, Sabine Wurmehl, Ryan Morrow","doi":"10.1107/S2052520624007091","DOIUrl":"10.1107/S2052520624007091","url":null,"abstract":"<p><p>Magnetic materials featuring triangular arrangements of spins are frequently investigated as platforms hosting magnetic frustration. Hexagonal perovskites with ordered vacancies serve as excellent candidates for two-dimensional triangular magnetism due to the considerable separation of the magnetic planes. In this work, the effects of chemical pressure on the ferromagnetic ground state of Ba<sub>2</sub>La<sub>2</sub>NiW<sub>2</sub>O<sub>12</sub> by substitution of Ba<sup>2+</sup> with Sr<sup>2+</sup> to produce Sr<sub>2</sub>La<sub>2</sub>NiW<sub>2</sub>O<sub>12</sub> are investigated. The two materials are characterized using synchrotron-based XRD, XANES and EXAFS in addition to magnetometry in order to correlate their crystal structures and magnetic properties. Both materials form in space group R3, yet as a result of the enhanced bending of key bond angles due to the effects of chemical pressure, the T<sub>C</sub> value of the magnetic Ni<sup>2+</sup> sublattice is reduced from ∼6 K in Ba<sub>2</sub>La<sub>2</sub>NiW<sub>2</sub>O<sub>12</sub> to 4 K in Sr<sub>2</sub>La<sub>2</sub>NiW<sub>2</sub>O<sub>12</sub>.</p>","PeriodicalId":7320,"journal":{"name":"Acta crystallographica Section B, Structural science, crystal engineering and materials","volume":" ","pages":"467-473"},"PeriodicalIF":1.3,"publicationDate":"2024-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11457098/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142103258","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}