首页 > 最新文献

Acta crystallographica Section B, Structural science, crystal engineering and materials最新文献

英文 中文
Synthesis, crystal structure and phase transitions of novel hybrid perovskite: bis(1,2-diaminopropane) di-μ-chloro-bis[diaquadichloromanganate(II)] dichloride. 新型杂化钙钛矿:双(1,2-二氨基丙烷)双μ-氯-双[二水二氯酸盐(II)]二氯盐的合成、晶体结构和相变。
IF 1.9 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2023-08-01 DOI: 10.1107/S2052520623005309
Seham K Abdel-Aal, Mohamed Souhassou, Pierrick Durand, Claude Lecomte, Ahmed S Abdel-Rahman, Nicolas Claiser

Single crystals of bis(1,2-diaminepropane) di-μ-chloro-bis[diaquadichloromanganate(II)] dichloride have been prepared by evaporation from ethanoic solution. The triclinic X-ray crystal structure is built as layers of centrosymmetric dimers of [Mn(Cl)4(H2O)2]2- octahedra and 1,2-diaminopropane. The inorganic part consists of Mn octahedra sharing one edge and distributed in the basal ac plane along the a direction. These doubly negative charged layers are separated along the b axis by a positively charged diamine propane layer. One Cl- anion contributes to the electroneutrality of the crystal interacting with both inorganic - through a hydrogen bond network to the two water molecules coordinated to Mn - and organic layers via the NH3+ ammonium group. Differential scanning calorimetry shows two endothermic main peaks at T = 366 K and T = 375 K related to the release of the water molecules. The resulting dehydrated material is C-centered monoclinic as shown by powder X-ray diffraction.

用乙醇溶液蒸发法制备了二氯二(1,2-二胺丙烷)二μ-氯二[二水二氯酸盐(II)]二氯单晶。三斜x射线晶体结构为[Mn(Cl)4(H2O)2]2-八面体和1,2-二氨基丙烷的中心对称二聚体层。无机部分由共用一条边的锰八面体组成,沿a方向分布在基面。这些带双负电荷的层沿着b轴被带正电荷的二胺丙烷层分开。一个Cl-阴离子有助于晶体的电中性,通过氢键网络与无机-和两个水分子配合Mn -和有机层通过NH3+铵基相互作用。差示扫描量热法在T = 366 K和T = 375 K处发现两个与水分子释放有关的吸热主峰。粉末x射线衍射显示,脱水后的材料为c中心单斜晶。
{"title":"Synthesis, crystal structure and phase transitions of novel hybrid perovskite: bis(1,2-diaminopropane) di-μ-chloro-bis[diaquadichloromanganate(II)] dichloride.","authors":"Seham K Abdel-Aal,&nbsp;Mohamed Souhassou,&nbsp;Pierrick Durand,&nbsp;Claude Lecomte,&nbsp;Ahmed S Abdel-Rahman,&nbsp;Nicolas Claiser","doi":"10.1107/S2052520623005309","DOIUrl":"https://doi.org/10.1107/S2052520623005309","url":null,"abstract":"<p><p>Single crystals of bis(1,2-diaminepropane) di-μ-chloro-bis[diaquadichloromanganate(II)] dichloride have been prepared by evaporation from ethanoic solution. The triclinic X-ray crystal structure is built as layers of centrosymmetric dimers of [Mn(Cl)<sub>4</sub>(H<sub>2</sub>O)<sub>2</sub>]<sup>2-</sup> octahedra and 1,2-diaminopropane. The inorganic part consists of Mn octahedra sharing one edge and distributed in the basal ac plane along the a direction. These doubly negative charged layers are separated along the b axis by a positively charged diamine propane layer. One Cl<sup>-</sup> anion contributes to the electroneutrality of the crystal interacting with both inorganic - through a hydrogen bond network to the two water molecules coordinated to Mn - and organic layers via the NH<sub>3</sub><sup>+</sup> ammonium group. Differential scanning calorimetry shows two endothermic main peaks at T = 366 K and T = 375 K related to the release of the water molecules. The resulting dehydrated material is C-centered monoclinic as shown by powder X-ray diffraction.</p>","PeriodicalId":7320,"journal":{"name":"Acta crystallographica Section B, Structural science, crystal engineering and materials","volume":"79 Pt 4","pages":"314-319"},"PeriodicalIF":1.9,"publicationDate":"2023-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9961104","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Gladstone-Dale compatibility, electronic polarizability and vibrational spectroscopy of minerals and inorganic compounds with V4+O and V4+O2 vanadyl groups. 含V4+O和V4+O2钒基的矿物和无机化合物的Gladstone-Dale相容性、电子极化率和振动谱。
IF 1.9 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2023-08-01 DOI: 10.1107/S2052520623005462
Nikita V Chukanov, Reinhard X Fischer, Olga N Kazheva, Sergey M Aksenov

VO and VO2 vanadyl groups with short (typically 1.57-1.68 Å), essentially covalent, V-O bonds are common for V4+-bearing oxysalts with [5]- and [6]-coordinated vanadium. There is a clear negative correlation between vanadyl bond lengths and wavenumbers of the bands of V-O stretching vibrations in infrared spectra (in the range 1000-880 cm-1). Optical, structural and chemical data for vanadyl minerals are used to calculate Gladstone-Dale compatibility coefficients. Gladstone-Dale compatibility indices of minerals containing vanadyl bonds are compared with total electronic polarizabilities of V4+. Unlike compounds of [5]-coordinated Ti4+, for most minerals with V4+=O (vanadyl) bonds there is good agreement between measured refractive indices and those calculated based on the polarizability concept.

具有短(通常为1.57-1.68 Å)共价V-O键的VO和VO2钒基在具有[5]-和[6]配位钒的含V4+氧盐中很常见。钒基键长与V-O拉伸振动的红外光谱波段(1000 ~ 880 cm-1)的波数呈明显的负相关。钒基矿物的光学、结构和化学数据用于计算Gladstone-Dale相容系数。比较了含钒基键矿物的Gladstone-Dale相容指数与V4+的总电子极化率。与[5]配位Ti4+化合物不同,对于大多数具有V4+=O(钒基)键的矿物,测量的折射率与基于极化率概念计算的折射率之间具有良好的一致性。
{"title":"Gladstone-Dale compatibility, electronic polarizability and vibrational spectroscopy of minerals and inorganic compounds with V<sup>4+</sup>O and V<sup>4+</sup>O<sub>2</sub> vanadyl groups.","authors":"Nikita V Chukanov,&nbsp;Reinhard X Fischer,&nbsp;Olga N Kazheva,&nbsp;Sergey M Aksenov","doi":"10.1107/S2052520623005462","DOIUrl":"https://doi.org/10.1107/S2052520623005462","url":null,"abstract":"<p><p>VO and VO<sub>2</sub> vanadyl groups with short (typically 1.57-1.68 Å), essentially covalent, V-O bonds are common for V<sup>4+</sup>-bearing oxysalts with [5]- and [6]-coordinated vanadium. There is a clear negative correlation between vanadyl bond lengths and wavenumbers of the bands of V-O stretching vibrations in infrared spectra (in the range 1000-880 cm<sup>-1</sup>). Optical, structural and chemical data for vanadyl minerals are used to calculate Gladstone-Dale compatibility coefficients. Gladstone-Dale compatibility indices of minerals containing vanadyl bonds are compared with total electronic polarizabilities of V<sup>4+</sup>. Unlike compounds of [5]-coordinated Ti<sup>4+</sup>, for most minerals with V<sup>4+</sup>=O (vanadyl) bonds there is good agreement between measured refractive indices and those calculated based on the polarizability concept.</p>","PeriodicalId":7320,"journal":{"name":"Acta crystallographica Section B, Structural science, crystal engineering and materials","volume":"79 Pt 4","pages":"336-343"},"PeriodicalIF":1.9,"publicationDate":"2023-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10018352","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
As predicted and more: modulated channel occupation in YZn5+x. 正如预测的那样,YZn5+x中的调制信道占用。
IF 1.9 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2023-08-01 DOI: 10.1107/S2052520623005292
Rie T Fredrickson, Daniel C Fredrickson

Like many complex intermetallic phases, the crystal structures of REZn5+x compounds (RE = lanthanide or Group 3 element) based on the EuMg5 type have gradually unfolded. The original reports described a complex hexagonal structure with an unusual combination of tetrahedrally close-packed regions and open spaces, as well as observations of superstructure reflections. More recently, we reinvestigated the structure of YZn5, reclassifying it as the EuMg5+x-type compound YZn5+x (x ≃ 0.2), in which disordered channels run along c through the spaces formerly considered open. In addition, DFT-chemical pressure (DFT-CP) analysis of ordered models of YZn5+x highlighted paths for communication between neighboring channels setting the stage for superstructure formation. Herein, the experimental elucidation of this effect is presented with the synthesis and structure determination of a modulated form of YZn5+x. By slow-cooling samples of YZn5+x from the annealing temperature, crystals were obtained that exhibit satellite reflections with the modulation wavevector q = {1over 3}a* + {1over 3}b* + 0.3041c*. Structure solution and refinement using a (3+1)D model in superspace group P31c({1over 3},!{1over 3}σ3)00s reveals incommensurate order in the structure's channels. Here, two Zn sites associated with the channels are present, each with discontinuous atomic domains that are slanted in the x3x4 plane. Their slanting corresponds to adjustments along the c axis for the presence or absence of close neighbors along that axis, while the occupation patterns of neighboring channels are shifted by {1over 3} of the modulation period. These features follow earlier predictions from CP analysis, highlighting how this approach can be used predictively in search of new phenomena.

与许多复杂的金属间相一样,基于EuMg5型的REZn5+x化合物(RE =镧系元素或3族元素)的晶体结构逐渐展开。最初的报告描述了一个复杂的六角形结构,具有四面体密集区域和开放空间的不寻常组合,以及对上层建筑反射的观察。最近,我们重新研究了YZn5的结构,将其重新分类为EuMg5+x型化合物YZn5+x (x≃0.2),其中无序的通道沿着c穿过以前被认为是开放的空间。此外,YZn5+x有序模型的dft -化学压力(DFT-CP)分析突出了相邻通道之间的通信路径,为上层建筑的形成奠定了基础。本文通过YZn5+x调制形式的合成和结构确定,对这一效应进行了实验验证。在退火温度下缓慢冷却YZn5+x样品,得到具有卫星反射的晶体,其调制波向量q = {1 / 3}a* + {1 / 3}b* + 0.3041c*。超空间群P31c({1 / 3},!)中(3+1)D模型的结构求解与细化{1 / 3}σ3)00s显示构造的通道顺序不相称。在这里,存在两个与通道相关的Zn位点,每个位点都具有在x3x4平面上倾斜的不连续原子域。它们的倾斜对应于沿c轴的存在或不存在近邻的调整,而相邻信道的占用模式则以调制周期的{1 / 3}移动。这些特征遵循CP分析的早期预测,突出了该方法如何用于预测寻找新现象。
{"title":"As predicted and more: modulated channel occupation in YZn<sub>5+x</sub>.","authors":"Rie T Fredrickson,&nbsp;Daniel C Fredrickson","doi":"10.1107/S2052520623005292","DOIUrl":"https://doi.org/10.1107/S2052520623005292","url":null,"abstract":"<p><p>Like many complex intermetallic phases, the crystal structures of REZn<sub>5+x</sub> compounds (RE = lanthanide or Group 3 element) based on the EuMg<sub>5</sub> type have gradually unfolded. The original reports described a complex hexagonal structure with an unusual combination of tetrahedrally close-packed regions and open spaces, as well as observations of superstructure reflections. More recently, we reinvestigated the structure of YZn<sub>5</sub>, reclassifying it as the EuMg<sub>5+x</sub>-type compound YZn<sub>5+x</sub> (x ≃ 0.2), in which disordered channels run along c through the spaces formerly considered open. In addition, DFT-chemical pressure (DFT-CP) analysis of ordered models of YZn<sub>5+x</sub> highlighted paths for communication between neighboring channels setting the stage for superstructure formation. Herein, the experimental elucidation of this effect is presented with the synthesis and structure determination of a modulated form of YZn<sub>5+x</sub>. By slow-cooling samples of YZn<sub>5+x</sub> from the annealing temperature, crystals were obtained that exhibit satellite reflections with the modulation wavevector q = {1over 3}a* + {1over 3}b* + 0.3041c*. Structure solution and refinement using a (3+1)D model in superspace group P31c({1over 3},!{1over 3}σ<sub>3</sub>)00s reveals incommensurate order in the structure's channels. Here, two Zn sites associated with the channels are present, each with discontinuous atomic domains that are slanted in the x<sub>3</sub>x<sub>4</sub> plane. Their slanting corresponds to adjustments along the c axis for the presence or absence of close neighbors along that axis, while the occupation patterns of neighboring channels are shifted by {1over 3} of the modulation period. These features follow earlier predictions from CP analysis, highlighting how this approach can be used predictively in search of new phenomena.</p>","PeriodicalId":7320,"journal":{"name":"Acta crystallographica Section B, Structural science, crystal engineering and materials","volume":"79 Pt 4","pages":"320-329"},"PeriodicalIF":1.9,"publicationDate":"2023-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10410308/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9973551","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
New Section Editor of Acta Crystallographica, Section B. 晶体学报B辑新编者。
IF 1.9 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2023-08-01 DOI: 10.1107/S2052520623006467
Alexander J Blake, Marc de Boissieu, Ashwini Nangia

Introducing the new Section Editor of Acta Crystallographica Section B.

介绍《晶体学报B辑》新的章节编辑器。
{"title":"New Section Editor of Acta Crystallographica, Section B.","authors":"Alexander J Blake,&nbsp;Marc de Boissieu,&nbsp;Ashwini Nangia","doi":"10.1107/S2052520623006467","DOIUrl":"https://doi.org/10.1107/S2052520623006467","url":null,"abstract":"<p><p>Introducing the new Section Editor of Acta Crystallographica Section B.</p>","PeriodicalId":7320,"journal":{"name":"Acta crystallographica Section B, Structural science, crystal engineering and materials","volume":"79 Pt 4","pages":"252"},"PeriodicalIF":1.9,"publicationDate":"2023-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9967692","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Effect of La doping on the structure and cycloidal spin ordering in multiferroic BiFeO3. La掺杂对多铁BiFeO3结构和摆线自旋有序的影响。
IF 1.9 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2023-08-01 DOI: 10.1107/S2052520623005437
Tomasz Pikula, Karolina Siedliska, Tadeusz Szumiata, Rafał Panek, Viktor I Mitsiuk, Leszek Ruchomski, Elżbieta Jartych

A series of Bi1-xLaxFeO3 samples with 0.00 ≤ x ≤ 0.30 was synthesized by the sol-gel method. The effects of lanthanum concentration on the phase formation, microstructure and cycloidal spin ordering were studied using X-ray diffraction, scanning electron microscopy and Mössbauer spectroscopy. The crystal structure of the La-doped bismuth ferrite transformed from rhombohedral R3c (x ≤ 0.05) to a mixture of R3c and cubic Pm3m (0.07 ≤ x ≤ 0.15) and finally to a mixture of R3c, Pm3m and orthorhombic Pbam (0.20 ≤ x ≤ 0.30). The Pbam phase, with characteristic porous microstructure shown by microscopy images, was observed in Bi1-xLaxFeO3 compounds for the first time. Based on the Mössbauer spectroscopy, it was found that the cycloidal spin ordering started to disappear at x = 0.07. With increasing La concentration the share of the cycloid decreased from 100% at 0.00 ≤ x ≤ 0.05 to 0% at x = 0.30. At the beginning, for x ≤ 0.02, the anharmonicity parameter, m, of the cycloidal spin ordering was about 0.5, which is typical of a pure BiFeO3 compound. In the range 0.05 ≤ x ≤ 0.25, the m parameter was of the order of 0.1, which indicated the practically harmonic character of the cycloid. The structural transition at x = 0.07 was accompanied by a substantial increase in magnetization.

采用溶胶-凝胶法合成了一系列0.00≤x≤0.30的Bi1-xLaxFeO3样品。利用x射线衍射、扫描电镜和Mössbauer能谱研究了镧浓度对相形成、微观结构和摆线自旋有序的影响。掺la铋铁氧体的晶体结构由菱形R3c (x≤0.05)转变为R3c与立方Pm3m的混合物(0.07≤x≤0.15),最后转变为R3c、Pm3m与正交pham的混合物(0.20≤x≤0.30)。首次在Bi1-xLaxFeO3化合物中观察到具有多孔结构的pham相。通过Mössbauer光谱分析发现,摆线自旋有序性在x = 0.07时开始消失。随着La浓度的增加,摆线的比例从0.00≤x≤0.05时的100%下降到x = 0.30时的0%。一开始,当x≤0.02时,摆线自旋有序的非谐性参数m约为0.5,这是纯BiFeO3化合物的典型特征。在0.05≤x≤0.25范围内,m参数约为0.1数量级,表明摆线的实际谐波特性。在x = 0.07处的结构转变伴随着磁化强度的大幅增加。
{"title":"Effect of La doping on the structure and cycloidal spin ordering in multiferroic BiFeO<sub>3</sub>.","authors":"Tomasz Pikula,&nbsp;Karolina Siedliska,&nbsp;Tadeusz Szumiata,&nbsp;Rafał Panek,&nbsp;Viktor I Mitsiuk,&nbsp;Leszek Ruchomski,&nbsp;Elżbieta Jartych","doi":"10.1107/S2052520623005437","DOIUrl":"https://doi.org/10.1107/S2052520623005437","url":null,"abstract":"<p><p>A series of Bi<sub>1-x</sub>La<sub>x</sub>FeO<sub>3</sub> samples with 0.00 ≤ x ≤ 0.30 was synthesized by the sol-gel method. The effects of lanthanum concentration on the phase formation, microstructure and cycloidal spin ordering were studied using X-ray diffraction, scanning electron microscopy and Mössbauer spectroscopy. The crystal structure of the La-doped bismuth ferrite transformed from rhombohedral R3c (x ≤ 0.05) to a mixture of R3c and cubic Pm3m (0.07 ≤ x ≤ 0.15) and finally to a mixture of R3c, Pm3m and orthorhombic Pbam (0.20 ≤ x ≤ 0.30). The Pbam phase, with characteristic porous microstructure shown by microscopy images, was observed in Bi<sub>1-x</sub>La<sub>x</sub>FeO<sub>3</sub> compounds for the first time. Based on the Mössbauer spectroscopy, it was found that the cycloidal spin ordering started to disappear at x = 0.07. With increasing La concentration the share of the cycloid decreased from 100% at 0.00 ≤ x ≤ 0.05 to 0% at x = 0.30. At the beginning, for x ≤ 0.02, the anharmonicity parameter, m, of the cycloidal spin ordering was about 0.5, which is typical of a pure BiFeO<sub>3</sub> compound. In the range 0.05 ≤ x ≤ 0.25, the m parameter was of the order of 0.1, which indicated the practically harmonic character of the cycloid. The structural transition at x = 0.07 was accompanied by a substantial increase in magnetization.</p>","PeriodicalId":7320,"journal":{"name":"Acta crystallographica Section B, Structural science, crystal engineering and materials","volume":"79 Pt 4","pages":"305-313"},"PeriodicalIF":1.9,"publicationDate":"2023-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9963883","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Elucidating the nature of chemical bonds in a coordination compound through quantum crystallographic techniques. 通过量子晶体学技术阐明配位化合物化学键的性质。
IF 1.9 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2023-08-01 DOI: 10.1107/S2052520623006364
Alessandro Genoni

Investigations simultaneously involving multiple techniques of quantum crystallography could be very useful to prove the consistency of obtained results or to highlight different facets of the same scientific phenomenon or problem. Pinto et al. [Acta Cryst. (2023), B79, 282-296] exploit three different quantum crystallographic techniques (Hansen & Coppens multipole model refinement, QTAIM analysis of the electron density, and Hirshfeld atom refinement) to characterize the nature of chemical bonds and of intra/intermolecular interactions in an organometallic compound.

同时涉及多种量子晶体学技术的研究对于证明所获得结果的一致性或突出同一科学现象或问题的不同方面非常有用。Pinto et al.[晶体学报](2023), B79, 282-296]利用三种不同的量子晶体学技术(Hansen & Coppens多极模型精化,电子密度的QTAIM分析和Hirshfeld原子精化)来表征有机金属化合物中化学键和分子内/分子间相互作用的性质。
{"title":"Elucidating the nature of chemical bonds in a coordination compound through quantum crystallographic techniques.","authors":"Alessandro Genoni","doi":"10.1107/S2052520623006364","DOIUrl":"https://doi.org/10.1107/S2052520623006364","url":null,"abstract":"<p><p>Investigations simultaneously involving multiple techniques of quantum crystallography could be very useful to prove the consistency of obtained results or to highlight different facets of the same scientific phenomenon or problem. Pinto et al. [Acta Cryst. (2023), B79, 282-296] exploit three different quantum crystallographic techniques (Hansen & Coppens multipole model refinement, QTAIM analysis of the electron density, and Hirshfeld atom refinement) to characterize the nature of chemical bonds and of intra/intermolecular interactions in an organometallic compound.</p>","PeriodicalId":7320,"journal":{"name":"Acta crystallographica Section B, Structural science, crystal engineering and materials","volume":"79 Pt 4","pages":"253-254"},"PeriodicalIF":1.9,"publicationDate":"2023-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9967690","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Application of the method for visualization of noncovalent interactions in conformational polymorphs of four organic acids. 四种有机酸构象多晶中非共价相互作用可视化方法的应用。
IF 1.9 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2023-06-01 DOI: 10.1107/S2052520623003955
Pavel A Pirozhkov, Andrei S Uhanov, Anton V Savchenkov

A method for the visualization of noncovalent interactions using examples of the conformational polymorphs of four organic compounds: 2-(phenylamino)nicotinic, 2-(3-chloro-2-methylphenylamino)nicotinic, N-(3-chloro-2-methylphenyl)anthranilic and 2-(methylphenylamino)nicotinic acids is examined. The changes in noncovalent contacts are plotted against the angle between the planes of aromatic rings allowing a visual representation of conformational adjustment of molecules as well as packing features of crystal structures. According to the k-Φ criterion, the studied structures represent conformational polymorphs. Different types of hydrogen bonding are discussed within the framework of the method of visualization and molecular Voronoi-Dirichlet polyhedra. Good correlations are found between calculated and experimental data for several cases, such as the agreement between π stacking and polymorphic transition temperatures as well as between the area of a contact and the energy of conjugation. Also, an attempt has been made to assess the relative contributions of conformational and packing polymorphism in the formation of polymorphs.

利用四种有机化合物:2-(苯胺)烟酸、2-(3-氯-2-甲基苯胺)烟酸、N-(3-氯-2-甲基苯基)苯胺酸和2-(甲基苯胺)烟酸的构象多晶型,研究了一种可视化非共价相互作用的方法。非共价接触的变化是根据芳香环平面之间的角度绘制的,从而可以直观地表示分子的构象调整以及晶体结构的填充特征。根据k-Φ准则,所研究的结构为构象多态性。在可视化方法和分子Voronoi-Dirichlet多面体的框架内讨论了不同类型的氢键。在一些情况下,计算数据和实验数据之间存在良好的相关性,例如π堆积和多晶转变温度之间的一致性,以及接触面积和共轭能之间的一致性。此外,还试图评估构象多态性和堆积多态性在多晶形成中的相对贡献。
{"title":"Application of the method for visualization of noncovalent interactions in conformational polymorphs of four organic acids.","authors":"Pavel A Pirozhkov,&nbsp;Andrei S Uhanov,&nbsp;Anton V Savchenkov","doi":"10.1107/S2052520623003955","DOIUrl":"https://doi.org/10.1107/S2052520623003955","url":null,"abstract":"<p><p>A method for the visualization of noncovalent interactions using examples of the conformational polymorphs of four organic compounds: 2-(phenylamino)nicotinic, 2-(3-chloro-2-methylphenylamino)nicotinic, N-(3-chloro-2-methylphenyl)anthranilic and 2-(methylphenylamino)nicotinic acids is examined. The changes in noncovalent contacts are plotted against the angle between the planes of aromatic rings allowing a visual representation of conformational adjustment of molecules as well as packing features of crystal structures. According to the k-Φ criterion, the studied structures represent conformational polymorphs. Different types of hydrogen bonding are discussed within the framework of the method of visualization and molecular Voronoi-Dirichlet polyhedra. Good correlations are found between calculated and experimental data for several cases, such as the agreement between π stacking and polymorphic transition temperatures as well as between the area of a contact and the energy of conjugation. Also, an attempt has been made to assess the relative contributions of conformational and packing polymorphism in the formation of polymorphs.</p>","PeriodicalId":7320,"journal":{"name":"Acta crystallographica Section B, Structural science, crystal engineering and materials","volume":"79 Pt 3","pages":"233-244"},"PeriodicalIF":1.9,"publicationDate":"2023-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9583849","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A topological approach to reconstructive solid-state transformations and its application for generation of new carbon allotropes. 重构固态转化的拓扑方法及其在新碳同素异形体生成中的应用。
IF 1.9 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2023-06-01 DOI: 10.1107/S205252062300255X
Artem A Kabanov, Ekaterina O Bukhteeva, Vladislav A Blatov

A novel approach is proposed for the description of possible reconstructive solid-state transformations, which is based on the analysis of topological properties of atomic periodic nets and relations between their subnets and supernets. The concept of a region of solid-state reaction that is the free space confined by a tile of the net tiling is introduced. These regions (tiles) form the reaction zone around a given atom A thus unambiguously determining the neighboring atoms that can interact with A during the transformation. The reaction zone is independent of the geometry of the crystal structure and is determined only by topological properties of the tiles. The proposed approach enables one to drastically decrease the number of trial structures when modeling phase transitions in solid state or generating new crystal substances. All crystal structures which are topologically similar to a given structure can be found by the analysis of its topological vicinity in the configuration space. Our approach predicts amorphization of the phase after the transition as well as possible single-crystal-to-single-crystal transformations. This approach is applied to generate 72 new carbon allotropes from the initial experimentally determined crystalline carbon structures and to reveal four allotropes, whose hardness is close to diamond. Using the tiling model it is shown that three of them are structurally similar to other superhard carbon allotropes, M-carbon and W-carbon.

在分析原子周期网的拓扑特性及其子网和超级网络之间的关系的基础上,提出了一种描述可能重构固体变换的新方法。引入了固体反应区域的概念,该区域是由网状平铺层的一个平铺层所限制的自由空间。这些区域(瓦片)在给定原子a周围形成反应区,从而明确地确定在转化过程中可以与a相互作用的邻近原子。反应区与晶体结构的几何形状无关,仅由瓦片的拓扑性质决定。所提出的方法使人们能够在模拟固态相变或生成新的晶体物质时大幅减少试验结构的数量。所有与给定结构拓扑相似的晶体结构都可以通过分析其在构型空间中的拓扑邻近来找到。我们的方法预测了相变后相的非晶化以及可能的单晶到单晶转变。该方法被应用于从最初实验确定的晶体碳结构中生成72个新的碳同素异形体,并揭示了四个硬度接近金刚石的同素异形体。利用平铺模型表明,其中三种碳在结构上与其他超硬碳同素异形体相似,即m碳和w碳。
{"title":"A topological approach to reconstructive solid-state transformations and its application for generation of new carbon allotropes.","authors":"Artem A Kabanov,&nbsp;Ekaterina O Bukhteeva,&nbsp;Vladislav A Blatov","doi":"10.1107/S205252062300255X","DOIUrl":"https://doi.org/10.1107/S205252062300255X","url":null,"abstract":"<p><p>A novel approach is proposed for the description of possible reconstructive solid-state transformations, which is based on the analysis of topological properties of atomic periodic nets and relations between their subnets and supernets. The concept of a region of solid-state reaction that is the free space confined by a tile of the net tiling is introduced. These regions (tiles) form the reaction zone around a given atom A thus unambiguously determining the neighboring atoms that can interact with A during the transformation. The reaction zone is independent of the geometry of the crystal structure and is determined only by topological properties of the tiles. The proposed approach enables one to drastically decrease the number of trial structures when modeling phase transitions in solid state or generating new crystal substances. All crystal structures which are topologically similar to a given structure can be found by the analysis of its topological vicinity in the configuration space. Our approach predicts amorphization of the phase after the transition as well as possible single-crystal-to-single-crystal transformations. This approach is applied to generate 72 new carbon allotropes from the initial experimentally determined crystalline carbon structures and to reveal four allotropes, whose hardness is close to diamond. Using the tiling model it is shown that three of them are structurally similar to other superhard carbon allotropes, M-carbon and W-carbon.</p>","PeriodicalId":7320,"journal":{"name":"Acta crystallographica Section B, Structural science, crystal engineering and materials","volume":"79 Pt 3","pages":"198-206"},"PeriodicalIF":1.9,"publicationDate":"2023-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9582789","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The study of mineral behavior at low and high temperatures and their properties using a combination of different methods has not become routine yet. 结合不同的方法研究矿物在低温和高温下的行为及其性质尚未成为常规。
IF 1.9 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2023-06-01 DOI: 10.1107/S2052520623002925
Sergey M Aksenov

The study of azoproite by Biryukov et al. [Acta Cryst. (2022), B78, 809-816) continues the systematic and complex investigation of the crystal structures, temperature behavior and magnetic properties of natural oxoborates.

biyukov等人对偶氮磷的研究[晶体学报]。(2022), B78, 809-816)继续对天然氧硼酸盐的晶体结构、温度行为和磁性进行系统而复杂的研究。
{"title":"The study of mineral behavior at low and high temperatures and their properties using a combination of different methods has not become routine yet.","authors":"Sergey M Aksenov","doi":"10.1107/S2052520623002925","DOIUrl":"https://doi.org/10.1107/S2052520623002925","url":null,"abstract":"<p><p>The study of azoproite by Biryukov et al. [Acta Cryst. (2022), B78, 809-816) continues the systematic and complex investigation of the crystal structures, temperature behavior and magnetic properties of natural oxoborates.</p>","PeriodicalId":7320,"journal":{"name":"Acta crystallographica Section B, Structural science, crystal engineering and materials","volume":"79 Pt 3","pages":"196-197"},"PeriodicalIF":1.9,"publicationDate":"2023-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9582792","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Unusual flash cooling-induced phase in a crystal of triphenylsilanol. 三苯基硅醇晶体中不寻常的闪冷诱导相。
IF 1.9 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2023-06-01 DOI: 10.1107/S2052520623004006
Monika K Krawczyk

The unique phase in a crystal of triphenylsilanol (Ph3SiOH) is reported. It is observed that after the crystal is flash-cooled from room temperature to 100 K, a new stable ordered phase II occurs with an increase in the unit-cell parameters compared to the earlier reported phase I. The new phase II occurs upon fast cooling while on slow cooling the disordered phase I is present. Gradual heating from 100 K (phase II) causes the crystal to return to the original phase I at about 150 K. The crystal undergoes the observed transformation in a reversible manner in many consecutive flash cooling/heating cycles without cracking.

报道了三苯基硅醇(Ph3SiOH)晶体中的独特相。观察到,当晶体从室温闪冷到100 K时,与先前报道的I相相比,出现了一个新的稳定有序的II相,并且单位胞参数增加。在快速冷却时出现了新的II相,而在缓慢冷却时出现了无序的I相。从100k (II相)开始逐渐加热,使晶体在150k左右回到最初的I相。在许多连续的闪冷/加热循环中,晶体以可逆的方式经历了所观察到的转变而没有破裂。
{"title":"Unusual flash cooling-induced phase in a crystal of triphenylsilanol.","authors":"Monika K Krawczyk","doi":"10.1107/S2052520623004006","DOIUrl":"https://doi.org/10.1107/S2052520623004006","url":null,"abstract":"<p><p>The unique phase in a crystal of triphenylsilanol (Ph<sub>3</sub>SiOH) is reported. It is observed that after the crystal is flash-cooled from room temperature to 100 K, a new stable ordered phase II occurs with an increase in the unit-cell parameters compared to the earlier reported phase I. The new phase II occurs upon fast cooling while on slow cooling the disordered phase I is present. Gradual heating from 100 K (phase II) causes the crystal to return to the original phase I at about 150 K. The crystal undergoes the observed transformation in a reversible manner in many consecutive flash cooling/heating cycles without cracking.</p>","PeriodicalId":7320,"journal":{"name":"Acta crystallographica Section B, Structural science, crystal engineering and materials","volume":"79 Pt 3","pages":"245-251"},"PeriodicalIF":1.9,"publicationDate":"2023-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10676750","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Acta crystallographica Section B, Structural science, crystal engineering and materials
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1