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ROC-325 Attenuates Hypoxia-Induced Pulmonary Hypertension Through Dual Inhibition of Autophagy and Hypoxia-Inducible Factor 2α Signaling ROC-325通过双重抑制自噬和缺氧诱导因子2α信号通路减轻低氧诱导的肺动脉高压
Pub Date : 2026-02-02 DOI: 10.1002/mef2.70045
Changlei Bao, Shuxin Liang, Dingyuan Liu, Xingting Wang, Dan Bai, Chuangjia Huang, Hanliang Sun, Zi Yang, Bitao Wu, Zixuan Chen, Jieyi Feng, Zinan Luo, Jintao Long, Jinsheng Zhu, June Bai, Li Zhang, Aiai Chu, Caojin Zhang, Haiyang Tang

The activation of autophagy in endothelial cells is a key mechanism underlying vascular remodeling, leading to the development and progression of pulmonary hypertension (PH). In our previous studies, we developed ROC-325, a novel lysosomal autophagy inhibitor, and demonstrated its potent therapeutic effects in severe pulmonary arterial hypertension (PAH). However, its role in chronic hypoxia-induced PH (HPH) remains unknown. Here, we observed increased LC3B-II/I and decreased p62/SQSTM1 in lung tissues of hypoxic mice, indicative of autophagy activation. ROC-325 treatment suppressed this activation by inhibiting LC3B-II accumulation and restoring p62 levels. ROC-325 significantly reduced right ventricular systolic pressure (RVSP), right ventricular hypertrophy (RVH), and pulmonary artery medial thickening and muscularization, indicating a significantly protective effect against HPH. Endothelial hypoxia-inducible factor 2α (HIF-2α) upregulation, resulting from prolyl hydroxylase domain protein 2 (PHD2) deficiency, was implicated in autophagy activation. Endothelial conditional PHD2 knockout mice, a spontaneous PH model, exhibited elevated LC3B-II/I and HIF-2α levels, both of which were reduced by ROC-325, leading to significant PH attenuation. In vitro, ROC-325 inhibited the proliferation of pulmonary microvascular endothelial cells derived from PHD2-deficient mice and enhanced HIF-2α degradation in human pulmonary artery endothelial cells. These findings, in summary, identify ROC-325 as a promising therapeutic agent for hypoxia-induced PH by modulating both autophagy and endothelial HIF-2α signaling.

内皮细胞自噬的激活是导致肺动脉高压(PH)发生和发展的血管重构的关键机制。在我们之前的研究中,我们开发了一种新的溶酶体自噬抑制剂ROC-325,并证明了其对严重肺动脉高压(PAH)的有效治疗作用。然而,其在慢性缺氧诱导的PH (HPH)中的作用尚不清楚。在这里,我们观察到缺氧小鼠肺组织中LC3B-II/I升高,p62/SQSTM1降低,表明自噬激活。ROC-325处理通过抑制LC3B-II积累和恢复p62水平来抑制这种激活。ROC-325显著降低右心室收缩压(RVSP)、右心室肥厚(RVH)和肺动脉内侧增厚和肌肉化,表明对HPH有显著的保护作用。脯氨酰羟化酶结构域蛋白2 (PHD2)缺乏导致内皮缺氧诱导因子2α (HIF-2α)上调,与自噬激活有关。内皮条件PHD2敲除小鼠(自发性PH模型)显示LC3B-II/I和HIF-2α水平升高,ROC-325降低了这两个水平,导致PH显著衰减。在体外实验中,ROC-325抑制了来自phd2缺陷小鼠的肺微血管内皮细胞的增殖,增强了人肺动脉内皮细胞中HIF-2α的降解。综上所述,这些发现表明ROC-325通过调节自噬和内皮细胞HIF-2α信号,是一种很有前景的治疗缺氧诱导PH的药物。
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引用次数: 0
ROC-325 Attenuates Hypoxia-Induced Pulmonary Hypertension Through Dual Inhibition of Autophagy and Hypoxia-Inducible Factor 2α Signaling ROC-325通过双重抑制自噬和缺氧诱导因子2α信号通路减轻低氧诱导的肺动脉高压
Pub Date : 2026-02-02 DOI: 10.1002/mef2.70045
Changlei Bao, Shuxin Liang, Dingyuan Liu, Xingting Wang, Dan Bai, Chuangjia Huang, Hanliang Sun, Zi Yang, Bitao Wu, Zixuan Chen, Jieyi Feng, Zinan Luo, Jintao Long, Jinsheng Zhu, June Bai, Li Zhang, Aiai Chu, Caojin Zhang, Haiyang Tang

The activation of autophagy in endothelial cells is a key mechanism underlying vascular remodeling, leading to the development and progression of pulmonary hypertension (PH). In our previous studies, we developed ROC-325, a novel lysosomal autophagy inhibitor, and demonstrated its potent therapeutic effects in severe pulmonary arterial hypertension (PAH). However, its role in chronic hypoxia-induced PH (HPH) remains unknown. Here, we observed increased LC3B-II/I and decreased p62/SQSTM1 in lung tissues of hypoxic mice, indicative of autophagy activation. ROC-325 treatment suppressed this activation by inhibiting LC3B-II accumulation and restoring p62 levels. ROC-325 significantly reduced right ventricular systolic pressure (RVSP), right ventricular hypertrophy (RVH), and pulmonary artery medial thickening and muscularization, indicating a significantly protective effect against HPH. Endothelial hypoxia-inducible factor 2α (HIF-2α) upregulation, resulting from prolyl hydroxylase domain protein 2 (PHD2) deficiency, was implicated in autophagy activation. Endothelial conditional PHD2 knockout mice, a spontaneous PH model, exhibited elevated LC3B-II/I and HIF-2α levels, both of which were reduced by ROC-325, leading to significant PH attenuation. In vitro, ROC-325 inhibited the proliferation of pulmonary microvascular endothelial cells derived from PHD2-deficient mice and enhanced HIF-2α degradation in human pulmonary artery endothelial cells. These findings, in summary, identify ROC-325 as a promising therapeutic agent for hypoxia-induced PH by modulating both autophagy and endothelial HIF-2α signaling.

内皮细胞自噬的激活是导致肺动脉高压(PH)发生和发展的血管重构的关键机制。在我们之前的研究中,我们开发了一种新的溶酶体自噬抑制剂ROC-325,并证明了其对严重肺动脉高压(PAH)的有效治疗作用。然而,其在慢性缺氧诱导的PH (HPH)中的作用尚不清楚。在这里,我们观察到缺氧小鼠肺组织中LC3B-II/I升高,p62/SQSTM1降低,表明自噬激活。ROC-325处理通过抑制LC3B-II积累和恢复p62水平来抑制这种激活。ROC-325显著降低右心室收缩压(RVSP)、右心室肥厚(RVH)和肺动脉内侧增厚和肌肉化,表明对HPH有显著的保护作用。脯氨酰羟化酶结构域蛋白2 (PHD2)缺乏导致内皮缺氧诱导因子2α (HIF-2α)上调,与自噬激活有关。内皮条件PHD2敲除小鼠(自发性PH模型)显示LC3B-II/I和HIF-2α水平升高,ROC-325降低了这两个水平,导致PH显著衰减。在体外实验中,ROC-325抑制了来自phd2缺陷小鼠的肺微血管内皮细胞的增殖,增强了人肺动脉内皮细胞中HIF-2α的降解。综上所述,这些发现表明ROC-325通过调节自噬和内皮细胞HIF-2α信号,是一种很有前景的治疗缺氧诱导PH的药物。
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引用次数: 0
Cardiotropic Gene Therapy for Heart Failure: Translational Lessons From AB-1002 心力衰竭的促心基因治疗:来自AB-1002的转化经验
Pub Date : 2026-01-29 DOI: 10.1002/mef2.70046
Nghia Phu Nguyen, Phillip Tran
<p>In a recent study published in <i>Nature Medicine</i>, Henry et al. [<span>1</span>] reported the first-in-human trial of AB-1002, a cardiotropic adeno-associated viral (AAV) vector encoding constitutively active inhibitor-1 (I-1c) for the treatment of advanced non-ischemic heart failure. The study demonstrates that a single intracoronary administration of AB-1002 is feasible, well tolerated and provides early evidence that targeted gene therapy may offer a practical translational strategy for restoring cardiac function in patients with limited treatment options.</p><p>Heart failure remains a pervasive global challenge, with current therapies largely slowing progression rather than restoring lost myocardial contractile function. The failing heart is characterized by impaired calcium handling, downregulated sarcoplasmic–endoplasmic reticulum calcium ions (Ca<sup>2+</sup>) ATPase (SERCA2a) pump activity, and maladaptive remodeling that perpetuates systolic dysfunction [<span>2, 3</span>]. Earlier gene therapy trials, including the CUPID trial targeting SERCA2a, were hindered by limited vector tropism and immune barriers [<span>2, 4</span>]. Yet advances in capsid engineering and cardiac-specific delivery have reignited the field [<span>3</span>], culminating in the current clinical translation.</p><p>I-1c, the central effector gene in AB-1002, encodes a truncated and constitutively active form of the endogenous protein phosphatase 1 (PP1) inhibitor [<span>3</span>]. In normal cardiomyocytes, β-adrenergic stimulation phosphorylates phospholamban (PLN) and activates the SERCA2a, enabling calcium reuptake during relaxation [<span>5</span>]. In heart failure, overactive PP1 dephosphorylates PLN, suppressing SERCA2a and causing cytosolic calcium overload and contractile weakness [<span>5</span>]. By maintaining PLN phosphorylation, I-1c restores SERCA2a activity, re-establishes Ca<sup>2+</sup> homeostasis, and improves relaxation and contractility [<span>3, 5</span>].</p><p>Preclinical work demonstrated that cardiac overexpression of I-1c using a re-engineered AAV2/8 vector improved ejection fraction and reduced left-ventricular dilation in a swine model of ischemic heart failure [<span>3</span>]. These studies laid the foundation for the cardiotropic AAV2i8 vector used in AB-1002—a hybrid of AAV2 and AAV8 sequences designed to enhance myocardial transduction while minimizing hepatic exposure [<span>3</span>].</p><p>In the first-in-human, open-label phase 1 trial [<span>1</span>], 11 patients with non-ischemic cardiomyopathy, New York Heart Association (NYHA) class III symptoms, and a baseline left ventricular ejection fraction (LVEF) of 15%–35% received a single intracoronary infusion of AB-1002, a chimeric cardiotropic AAV2i8 vector encoding constitutively active inhibitor-1. Two escalating doses were evaluated—3.25 × 10<sup>13</sup> vg (cohort 1) and 1.08 × 10<sup>14</sup> vg (cohort 2)—across three study centers in the United States. Participants
在最近发表在《自然医学》杂志上的一项研究中,Henry等人报道了AB-1002的首次人体试验,AB-1002是一种嗜心腺相关病毒(AAV)载体,编码构成活性抑制剂-1 (I-1c),用于治疗晚期非缺血性心力衰竭。该研究表明,单次冠状动脉内给药AB-1002是可行的,耐受性良好,并提供了早期证据,表明靶向基因治疗可能为治疗选择有限的患者恢复心功能提供实用的转化策略。心力衰竭仍然是一个普遍的全球性挑战,目前的治疗主要是减缓进展,而不是恢复失去的心肌收缩功能。心力衰竭的特征是钙处理受损,肌浆-内质网钙离子(Ca2+) atp酶(SERCA2a)泵活性下调,以及持续收缩功能障碍的适应性重构不良[2,3]。早期的基因治疗试验,包括靶向SERCA2a的CUPID试验,受到有限的载体向性和免疫屏障的阻碍[2,4]。然而,衣壳工程和心脏特异性递送的进步重新点燃了[3]领域,并在目前的临床转化中达到高潮。I-1c是AB-1002的中心效应基因,编码内源性蛋白磷酸酶1 (PP1)抑制剂[3]的截断和组成活性形式。在正常心肌细胞中,β-肾上腺素能刺激磷酸化磷蛋白(PLN)并激活SERCA2a,使放松[5]期间钙再摄取。在心力衰竭中,过度活跃的PP1使PLN去磷酸化,抑制SERCA2a,导致胞质钙超载和收缩无力[5]。通过维持PLN磷酸化,I-1c恢复SERCA2a活性,重建Ca2+稳态,并改善松弛和收缩性[3,5]。临床前研究表明,在猪缺血性心力衰竭模型中,使用重新设计的AAV2/8载体过表达I-1c可改善射血分数并降低左心室扩张。这些研究为ab -1002中使用的亲心型AAV2i8载体奠定了基础,这是一种AAV2和AAV8序列的杂交,旨在增强心肌转导,同时减少肝脏暴露[3]。在首次人体开放标签1期试验[1]中,11名非缺血性心肌病,纽约心脏协会(NYHA) III类症状,基线左室射血分数(LVEF)为15%-35%的患者接受了单次冠状动脉内注射AB-1002,这是一种嵌合性心性AAV2i8载体,编码构成活性抑制剂-1。在美国的三个研究中心评估了两种递增剂量——3.25 × 1013 vg(队列1)和1.08 × 1014 vg(队列2)。参与者主要是男性(82%)患有晚期医学难治性非缺血性心肌病;队列1的中位年龄为73.5岁,队列2的中位年龄为57岁。输注过程完成,无重大并发症。在12个月的随访中,9例患者发生了83例治疗后出现的不良事件,未发生与治疗相关的严重不良事件或预定的剂量限制性毒性(心肌炎、肌炎、中性粒细胞减少症或心脏填塞)。最常见的事件是轻度低血压和血肌酐升高(每3例)。5名高剂量受者中有4名出现短暂、自限性谷丙转氨酶(ALT)和天冬氨酸转氨酶(AST)升高(≤正常上限的2倍),且无后遗症。1例死亡(心肌病,输注后204天)被判定与治疗无关。实验室、心电图或生命体征参数均未发现临床相关异常。在12个月时,队列1的平均LVEF从30.5%增加到42.2%,队列2从24.5%增加到36.7%,相当于绝对收益约12个百分点;所有可评估患者均改善≥5分。11例患者中有7例改善≥1个NYHA等级,而队列1显示峰值耗氧量(pVO2)增加18.8%,6分钟步行测试(6MWT)增加36%。生活质量指标改善或保持稳定(明尼苏达州心衰患者生活和堪萨斯城心肌病问卷调查),心脏生物标志物(NT-proBNP,肌钙蛋白I,补体C3/C4)在整个研究过程中保持稳定。在第4周至第12周之间观察到对AAV2i8衣壳或I-1c的短暂t细胞反应,与轻度肝酶升高相吻合,但在第12个月减弱到无法检测到的水平。在一名在输注后13个月接受左心室辅助装置植入的患者中,心肌组织分析证实AAV2i8-I-1c转导效率高(1.19 vg dg-1),并恢复了与未失败对照组相当的磷蛋白Ser16磷酸化,证明了人体体内靶标作用。 这些结果证明了一次性冠状动脉内促心基因治疗晚期心力衰竭的可行性、安全性和早期生物活性,为人类衰竭心脏中钙处理的持久分子修复提供了第一个临床概念证明(图1)。载体的心向性是其成功的关键。传统的AAV1或AAV9血清型表现出部分心脏倾向,但也感染肝脏和骨骼肌,增加了安全性问题。AAV2i8通过合理的衣壳工程,结合AAV2的结合特异性和aav8[1]的高效转导,在心肌细胞中优先摄取。这种选择性递送将治疗性表达集中在心脏,从而降低载体剂量并最大限度地减少全身暴露。重组aav向组织特异性精确方向的发展,支撑了心血管医学基因治疗的复兴。除了技术进步,AB-1002还体现了从实验到临床的转化轨迹。将这种一次性基因干预与精确诊断和多组学分析相结合,可能会彻底改变心力衰竭的治疗方式。AB-1002试验虽然规模很小,但证明了原位心肌基因修复作为终身药物治疗的补充甚至替代方案的可行性。同时,这些发现应该在早期研究中精心选择的典型患者群体的背景下进行解释,这些研究优先考虑心肌靶点介入的安全性和评估,而不是广泛的普遍性。虽然预计AB-1002靶向的途径不会受到年龄或性别的强烈影响,但考虑到心肌疤痕和灌注异质性对基因传递的潜在影响,排除缺血性心肌病为外推定义了一个重要的边界。除了这些考虑之外,还有一些挑战削弱了人们的热情。预先存在的针对AAV衣壳的中和抗体可能限制患者的资格。矢量制造仍然成本高昂且产能受限,威胁着可扩展性。转基因表达的长期持久性和对I-1c或载体的潜在免疫反应需要长期观察。此外,虽然短期的收缩改善是有希望的,但证明生存或住院治疗的好处将需要更大的随机试验。这些警告强调了在载体设计和免疫调节方面继续进行机制研究和平行创新的重要性。未来的迭代可能包括自我调节或组织响应启动子,使可滴定的基因表达和个性化剂量。同样的心向性载体也可以适用于其他心肌靶点——serca2a再传递、S100A1增强或基于crispr的遗传性心肌病纠正[2]。因此,aav2288平台的模块化将其定位为下一代再生心脏病学的基石。这种转变与精确和转化医学的使命相一致,后者寻求设计不仅延长生命而且恢复生理功能的疗法。Nghia Phu Nguyen:构思,写作-原稿。菲利普:写作-审查和编辑,监督。两位作者已经阅读并批准了最终的手稿。作者没有得到这项工作的特别资助。作者没有什么可报告的。作者声明无利益冲突。作者没有什么可报告的。
{"title":"Cardiotropic Gene Therapy for Heart Failure: Translational Lessons From AB-1002","authors":"Nghia Phu Nguyen,&nbsp;Phillip Tran","doi":"10.1002/mef2.70046","DOIUrl":"10.1002/mef2.70046","url":null,"abstract":"&lt;p&gt;In a recent study published in &lt;i&gt;Nature Medicine&lt;/i&gt;, Henry et al. [&lt;span&gt;1&lt;/span&gt;] reported the first-in-human trial of AB-1002, a cardiotropic adeno-associated viral (AAV) vector encoding constitutively active inhibitor-1 (I-1c) for the treatment of advanced non-ischemic heart failure. The study demonstrates that a single intracoronary administration of AB-1002 is feasible, well tolerated and provides early evidence that targeted gene therapy may offer a practical translational strategy for restoring cardiac function in patients with limited treatment options.&lt;/p&gt;&lt;p&gt;Heart failure remains a pervasive global challenge, with current therapies largely slowing progression rather than restoring lost myocardial contractile function. The failing heart is characterized by impaired calcium handling, downregulated sarcoplasmic–endoplasmic reticulum calcium ions (Ca&lt;sup&gt;2+&lt;/sup&gt;) ATPase (SERCA2a) pump activity, and maladaptive remodeling that perpetuates systolic dysfunction [&lt;span&gt;2, 3&lt;/span&gt;]. Earlier gene therapy trials, including the CUPID trial targeting SERCA2a, were hindered by limited vector tropism and immune barriers [&lt;span&gt;2, 4&lt;/span&gt;]. Yet advances in capsid engineering and cardiac-specific delivery have reignited the field [&lt;span&gt;3&lt;/span&gt;], culminating in the current clinical translation.&lt;/p&gt;&lt;p&gt;I-1c, the central effector gene in AB-1002, encodes a truncated and constitutively active form of the endogenous protein phosphatase 1 (PP1) inhibitor [&lt;span&gt;3&lt;/span&gt;]. In normal cardiomyocytes, β-adrenergic stimulation phosphorylates phospholamban (PLN) and activates the SERCA2a, enabling calcium reuptake during relaxation [&lt;span&gt;5&lt;/span&gt;]. In heart failure, overactive PP1 dephosphorylates PLN, suppressing SERCA2a and causing cytosolic calcium overload and contractile weakness [&lt;span&gt;5&lt;/span&gt;]. By maintaining PLN phosphorylation, I-1c restores SERCA2a activity, re-establishes Ca&lt;sup&gt;2+&lt;/sup&gt; homeostasis, and improves relaxation and contractility [&lt;span&gt;3, 5&lt;/span&gt;].&lt;/p&gt;&lt;p&gt;Preclinical work demonstrated that cardiac overexpression of I-1c using a re-engineered AAV2/8 vector improved ejection fraction and reduced left-ventricular dilation in a swine model of ischemic heart failure [&lt;span&gt;3&lt;/span&gt;]. These studies laid the foundation for the cardiotropic AAV2i8 vector used in AB-1002—a hybrid of AAV2 and AAV8 sequences designed to enhance myocardial transduction while minimizing hepatic exposure [&lt;span&gt;3&lt;/span&gt;].&lt;/p&gt;&lt;p&gt;In the first-in-human, open-label phase 1 trial [&lt;span&gt;1&lt;/span&gt;], 11 patients with non-ischemic cardiomyopathy, New York Heart Association (NYHA) class III symptoms, and a baseline left ventricular ejection fraction (LVEF) of 15%–35% received a single intracoronary infusion of AB-1002, a chimeric cardiotropic AAV2i8 vector encoding constitutively active inhibitor-1. Two escalating doses were evaluated—3.25 × 10&lt;sup&gt;13&lt;/sup&gt; vg (cohort 1) and 1.08 × 10&lt;sup&gt;14&lt;/sup&gt; vg (cohort 2)—across three study centers in the United States. Participants","PeriodicalId":74135,"journal":{"name":"MedComm - Future medicine","volume":"5 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2026-01-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/mef2.70046","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146136673","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Advancing Surgical Practice With Mixed Reality: Current Innovations and Future Prospects 用混合现实推进外科实践:当前创新和未来展望
Pub Date : 2025-12-23 DOI: 10.1002/mef2.70043
Yifan Ke, Kunpeng Hu

Mixed reality is an immersive visualization technology based on simultaneous localization and mapping systems and standalone head-mounted displays. It enables seamless integration and dynamic interaction among users, virtual elements, and the physical environment. Although numerous clinical studies and in vitro experiments have confirmed the value of mixed reality in surgical practice, the hierarchy of evidence remains limited. This review draws on published English-language literature to summarize its technical foundations, clinical applications, current innovations, and existing challenges. Specifically, the primary procedures of mixed reality-assisted surgery consist of three-dimensional reconstruction, holographic visualization, and spatial registration. Its clinical applications span preoperative planning, intraoperative navigation, surgical training, and postoperative rehabilitation. However, current limitations include insufficient computational and display capabilities of head-mounted displays, inadequate accuracy in spatial registration, high costs, workflow complexity, and unresolved ethical concerns. Therefore, we recommend increased resource allocation for technological innovations, multicenter randomized controlled clinical trials, and detailed risk-benefit assessments, aiming to establish and validate standardized clinical workflows. As the first comprehensive narrative review to compare the clinical applicability of mixed reality across all surgical specialties, this article outlines future research directions by analyzing representative clinical studies and offers a reliable report on current progress.

混合现实是一种沉浸式可视化技术,基于同步定位和地图系统以及独立的头戴式显示器。它支持用户、虚拟元素和物理环境之间的无缝集成和动态交互。尽管大量的临床研究和体外实验已经证实了混合现实在外科实践中的价值,但证据的层次仍然有限。这篇综述利用已发表的英语文献来总结其技术基础、临床应用、当前的创新和存在的挑战。具体来说,混合现实辅助手术的主要程序包括三维重建、全息可视化和空间配准。其临床应用涵盖术前规划、术中导航、手术训练和术后康复。然而,目前的限制包括头戴式显示器的计算和显示能力不足,空间配准精度不足,成本高,工作流程复杂,以及未解决的伦理问题。因此,我们建议增加技术创新的资源分配,多中心随机对照临床试验和详细的风险-效益评估,旨在建立和验证标准化的临床工作流程。作为第一篇比较混合现实在所有外科专业临床适用性的综合叙述性综述,本文通过分析有代表性的临床研究,概述了未来的研究方向,并提供了一份可靠的当前进展报告。
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引用次数: 0
Air Pollution-Induced Epigenetic Regulation in Respiratory Diseases: Mechanisms, Dysregulation, and Therapeutic Opportunities 空气污染诱发呼吸系统疾病的表观遗传调控:机制、失调和治疗机会
Pub Date : 2025-12-18 DOI: 10.1002/mef2.70044
Ruitong Zeng, Jiliu Liu, Guoping Li, Junyi Wang, Anying Xiong, Ying Xiong, Xiang He

Air pollution poses a significant threat to respiratory health globally, contributing to the development and worsening of diseases, such as asthma, chronic obstructive pulmonary disease, pulmonary fibrosis, and lung cancer. A key mechanism behind this involves epigenetic reprogramming, where environmental exposures alter gene activity without changing the underlying DNA sequence itself. This review deciphers the multilayered epigenetic mechanisms linking pollutants (e.g., PM2.5, cigarette smoke, and ozone) to respiratory pathology, emphasizing reversible modifications that bridge environmental exposure and disease phenotypes. Air pollution-induced epigenetic reprogramming regulates critical biological processes, such as immune imbalance, chronic inflammation, oxidative stress, cellular dysfunction (senescence, apoptosis, and ferroptosis), tissue remodeling (epithelial–mesenchymal transition and fibrosis), and genomic instability. Specifically, aberrant DNA methylation, dysregulated RNA methylation, perturbed noncoding RNA networks, and histone modification abnormalities collectively drive disease pathogenesis. Furthermore, emerging epigenetic therapies targeting these modifications, such as DNA methyltransferase inhibitors (5-AZADC), histone deacetylase inhibitors, and RNA methylation regulators (methyltransferase-like 3 inhibitor STM2457), show promising therapeutic potential. This review highlights the reversibility of epigenetic changes as a strategic basis for intervention, emphasizing the need for future research on mixed exposures, tissue-specific mechanisms, and clinical translation to mitigate the global burden of pollution-related respiratory diseases.

空气污染对全球呼吸系统健康构成重大威胁,导致哮喘、慢性阻塞性肺病、肺纤维化和肺癌等疾病的发展和恶化。这背后的一个关键机制涉及表观遗传重编程,其中环境暴露改变基因活性而不改变潜在的DNA序列本身。这篇综述揭示了将污染物(如PM2.5、香烟烟雾和臭氧)与呼吸病理联系起来的多层表观遗传机制,强调了连接环境暴露和疾病表型的可逆修饰。空气污染诱导的表观遗传重编程调节关键的生物过程,如免疫失衡、慢性炎症、氧化应激、细胞功能障碍(衰老、凋亡和铁死亡)、组织重塑(上皮-间质转化和纤维化)和基因组不稳定。具体来说,DNA甲基化异常、RNA甲基化失调、非编码RNA网络紊乱和组蛋白修饰异常共同驱动疾病的发病机制。此外,针对这些修饰的新兴表观遗传疗法,如DNA甲基转移酶抑制剂(5-AZADC)、组蛋白去乙酰化酶抑制剂和RNA甲基化调节剂(甲基转移酶样3抑制剂STM2457),显示出良好的治疗潜力。这篇综述强调了表观遗传变化的可逆性作为干预的战略基础,强调未来需要对混合暴露、组织特异性机制和临床转化进行研究,以减轻污染相关呼吸系统疾病的全球负担。
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引用次数: 0
Artificial Intelligence in Traditional Chinese Medicine: Bridging Ancient Practice and Future Innovation 人工智能在中医中的应用:连接古代实践与未来创新
Pub Date : 2025-12-11 DOI: 10.1002/mef2.70042
Zhehan Jiang, Quanming Peng, Li Li, Shate Xiang

Traditional Chinese Medicine (TCM), with its fragmented knowledge system, subjective diagnostics, and limited standardization, faces ongoing challenges in modernization. The rapid development of Large Language Models (LLMs) offers an unprecedented opportunity for the digitalization and standardization of TCM knowledge. By leveraging deep semantic understanding, contextual reasoning, and knowledge-graph–based inference, LLMs can systematize knowledge, integrate multimodal data, and support both standardized and personalized decision-making. Several TCM–LLMs, such as Qibo and MedChatZH, have been developed. Although previous reviews compared individual TCM–LLMs, a comprehensive analysis of common characteristics is lacking. This review addresses this gap by examining the “construction–application–challenges–prospects” paradigm of TCM–LLMs. Construction generally involves collecting authoritative data from diverse sources, standardizing textual content, training and fine-tuning on foundational LLMs, and subsequent evaluation. Key applications include auxiliary diagnosis and treatment, health management, medical education, and drug discovery. Five major challenges are data quality, reasoning performance, multimodal integration, ethical and regulatory compliance, and cultural adaptability. On the basis of this analysis, we propose a classification scheme that categorizes applications into four types and adopt the identified challenges as evaluation dimensions for future TCM–LLMs. This framework aims to clarify conceptual structures, guide methodology, and provide a foundation for innovation and cross-cultural integration in TCM research.

中医知识体系碎片化、诊断主观化、标准化程度有限,在现代化进程中面临着持续的挑战。大语言模型(llm)的快速发展为中医知识的数字化和标准化提供了前所未有的机遇。通过利用深度语义理解、上下文推理和基于知识图的推理,法学硕士可以将知识系统化,整合多模态数据,并支持标准化和个性化决策。已经开发了几个tcm - llm,如Qibo和MedChatZH。虽然以前的文献比较了各个中药- llm,但缺乏对其共同特征的全面分析。本文通过考察中医法学硕士的“构建-应用-挑战-前景”范式来解决这一差距。构建通常包括从各种来源收集权威数据,标准化文本内容,对基础法学硕士进行培训和微调,以及随后的评估。主要应用包括辅助诊断和治疗、健康管理、医学教育和药物发现。五大挑战是数据质量、推理性能、多模式集成、道德和法规遵从性以及文化适应性。在此分析的基础上,我们提出了一个分类方案,将应用分为四种类型,并将确定的挑战作为未来tcm - llm的评估维度。该框架旨在澄清概念结构,指导方法论,并为中医研究的创新和跨文化整合提供基础。
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引用次数: 0
Optogenetic Regulation of Integrated Stress Responses: Developing Novel Broad-Spectrum Antiviral Strategies 综合应激反应的光遗传调控:开发新的广谱抗病毒策略
Pub Date : 2025-12-04 DOI: 10.1002/mef2.70040
Shizhan Cui, Zehan Pang, Bixia Hong
<p>In a recent publication in <i>Cell</i>, Wong et al. presented an optogenetic system for screening compounds that specifically modulate the integrated stress response (ISR) [<span>1</span>]. The authors identified eight non-cytotoxic ISR enhancers as broad-spectrum antiviral agents and revealed their key mechanism: the selective targeting of general control nonderepressible 2 (GCN2) to upregulate activating transcription factor 4 (ATF4) expression, thereby sensitizing cells to stress and apoptosis [<span>1</span>].</p><p>Optogenetics enables precise spatiotemporal control of cellular activity by conferring light sensitivity via heterologous expression of photosensitive proteins. This approach is increasingly being integrated with synthetic biology to facilitate novel paradigms in phenotypic drug discovery [<span>2</span>]. Meanwhile, the ISR pathway represents a conserved signaling pathway activated by four stress sensor kinases—heme-regulated inhibitor (HRI), protein kinase R (PKR), protein kinase R-like ER kinase (PERK), and GCN2—which respond to diverse stressors such as viral double-stranded RNA [<span>3</span>]. Upon activation, these kinases phosphorylate the eukaryotic translation initiation factor 2 subunit alpha (eIF2α), leading to the selective translation of ISR-related proteins, such as ATF4, C/EBP homologous protein (CHOP), and growth arrest and DNA damage-inducible protein 34 (GADD34), thereby modulating cell survival and function. Given this regulatory capacity, ISR-enhancing compounds represent a novel strategy for the development of broad-spectrum antiviral therapeutics [<span>3</span>]. The combination of optogenetics-driven precise manipulation and deeper exploration of the ISR network—particularly its crosstalk with other signaling pathways—may open breakthrough directions for future broad-spectrum antiviral research.</p><p>To achieve precise control of the ISR pathway, Taivan et al. developed an optogenetic platform that dynamically stimulates the ISR signaling using a light-activated optogenetic PKR (opto-PKR) [<span>4</span>]. The dsRBM1 and dsRBM2 regions of PKR were replaced with an optimized mutant of the <i>Arabidopsis</i> blue light receptor Cry, namely Cry2Olig (E490G). Upon transduction of opto-PKR into cells, exposure to blue light prompted Cry2 aggregation, inducing in PKR oligomerization, kinase activation, and subsequent initiation of ISR. This light-controlled system simulates PKR-mediated ISR activation as observed during viral infection, while avoiding off-target cytotoxicity [<span>4</span>]. The platform's efficacy was validated through both pharmacological activators and inhibitors of the ISR pathway (Figure 1a) [<span>1</span>]. Crucially, unlike traditional small-molecule stressors that often cause cross-pathway interference, this approach minimizes such off-target effects and offers immediate deactivation in darkness, enabling transient response unattainable with conventional small-molecule activators.
Wong等人在Cell杂志最近发表的一篇文章中介绍了一种光遗传学系统,用于筛选特异性调节综合应激反应(ISR)[1]的化合物。作者鉴定了8种非细胞毒性ISR增强剂作为广谱抗病毒药物,并揭示了它们的关键机制:选择性靶向一般控制非抑制2 (GCN2)上调活化转录因子4 (ATF4)的表达,从而使细胞对应激和凋亡敏感。光遗传学通过光敏蛋白的异源表达赋予光敏性,从而实现对细胞活动的精确时空控制。这种方法正越来越多地与合成生物学相结合,以促进表型药物发现的新范式。同时,ISR通路是一条保守的信号通路,由四种应激传感器激酶——血红素调节抑制剂(HRI)、蛋白激酶R (PKR)、蛋白激酶R样ER激酶(PERK)和gcn2激活,它们对多种应激源(如病毒双链RNA[3])做出反应。激活后,这些激酶磷酸化真核翻译起始因子2亚基α (eIF2α),导致isr相关蛋白的选择性翻译,如ATF4、C/EBP同源蛋白(CHOP)、生长阻滞和DNA损伤诱导蛋白34 (GADD34),从而调节细胞存活和功能。鉴于这种调节能力,isr增强化合物代表了开发广谱抗病毒治疗药物的新策略。结合光遗传学驱动的精确操作和对ISR网络的更深入探索,特别是其与其他信号通路的串扰,可能为未来的广谱抗病毒研究开辟突破性方向。为了实现对ISR通路的精确控制,Taivan等人开发了一个光遗传平台,该平台使用光激活光遗传PKR (optopkr)[4]动态刺激ISR信号。将PKR的dsRBM1和dsRBM2区域替换为拟南芥蓝光受体Cry的优化突变体Cry2Olig (E490G)。在光PKR转导到细胞后,暴露在蓝光下会促使Cry2聚集,诱导PKR寡聚、激酶激活和随后的ISR启动。这种光控系统模拟了病毒感染期间观察到的pcr介导的ISR激活,同时避免了脱靶细胞毒性[4]。通过ISR通路的药理激活剂和抑制剂验证了该平台的有效性(图1a)[1]。最关键的是,与传统的小分子应激源不同,这种方法通常会引起交叉通路干扰,它最大限度地减少了这种脱靶效应,并在黑暗中立即失活,实现了传统小分子激活剂无法实现的瞬态反应。总之,这些特征突出了光遗传平台的时空精度和特异性优势,为病毒与宿主之间的动态研究提供了一种新的工具。它不仅可以高通量筛选特定的ISR调节剂,还可以实时观察病毒逃避ISR防御的关键机制,从而为开发有效的抗病毒治疗奠定基础。在这项研究中,对370,830种化合物进行了高通量筛选,鉴定出8种无细胞毒性的小分子(IBX-200至IBX-207),它们有效地降低了光pkr细胞在光下的活力。这些化合物在黑暗中对光pkr细胞没有急性细胞毒性,浓度高达50 μM,但在光照下表现出半最大有效浓度值(EC50) ~ 0.1至~ 1 μM。基于选择性增强多种ISR通路诱导的细胞死亡的能力,这些化合物被归类为ISR增强剂[1]。机制研究表明,代表性化合物IBX-200、IBX-202和IBX-204诱导ISR激活,包括ATF4和CHOP表达的显著升高,以及ATP消耗的增加,但差异调节eIF2α磷酸化。进一步分析表明,IBX-200和IBX-204特异性结合GCN2,离解常数(Kd)分别为25.2和3.2 μM,不影响HRI、PKR和PERK激酶的活性。计算和细胞分析证实,这两种化合物都促进了GCN2 Thr899位点的磷酸化,特别是在光照下。值得注意的是,IBX-202转化为IBX-200类类似物家族化合物的化学作用与IBX-200相似(图1b)。细胞实验表明,这三种化合物(IBX-200、IBX-202和IBX-204)均能抑制HSV-1、ZIKV和RSV,半数最大抑制浓度(IC50)值在1 ~ 100 μM之间。此外,IBX-200显著降低了感染小鼠眼组织中HSV-1的复制。 总的来说,这些靶向gcn2的化合物具有广谱抗病毒活性,代表了新型抗病毒治疗的有希望的候选者。这项研究通过促进从传统的“激活/抑制”二元调控向“精确调控”新范式的转变,代表了isr靶向治疗的重大进展。综上所述,本研究证实了光遗传学是鉴定ISR调节化合物的有效平台,筛选的ISR增强子显示出开发广谱抗病毒药物的候选药物的潜力。重要的是,这种光遗传学策略可以扩展到筛选其他关键通路的调节剂,如Wnt/β-catenin和RAS/ERK信号,与依赖于多靶点化合物的传统激活方法相比,提供特异性和精确的时空控制。然而,本研究使用的系统也存在一定的局限性,包括ISR增强剂持续存在下ISR过度激活和凋亡的风险,以及蓝光对组织的有限穿透,这些限制了其在类器官和原位组织中的应用。因此,临床翻译需要精确调节ISR激活来平衡抗病毒效果和凋亡风险,这表明ISR增强剂可能不适合长期维持治疗。为提高临床适用性,应探索靶向或局部给药途径,将药物作用集中在病毒感染部位,尽量减少全身损害。此外,间歇给药方案或与抑制过度细胞凋亡和炎症反应的药物联合治疗可能有助于潜在的治疗益处。未来的研究可能会集中在开发光控小分子筛选工具,用于其他途径,推进机制研究,并促进下一代范式转换药物的发现。洪碧霞设计了本研究;崔世展和庞泽涵阅读了论文并分析了数据;崔士展、庞泽涵、洪碧霞撰写并修改了原稿。所有作者都阅读并批准了最终稿件。作者没有什么可报告的。作者声明无利益冲突。作者没有什么可报告的。
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引用次数: 0
Global Burden and Future Projections of Urological Cancers: A Comprehensive Analysis From the Global Burden of Disease Study 2021 泌尿系统癌症的全球负担和未来预测:来自2021年全球疾病负担研究的综合分析
Pub Date : 2025-11-26 DOI: 10.1002/mef2.70041
Mengyi Zhu, Haoxuan Wang, Haishan Lin, Guibin Hong, Yun Wang, Fan Jiang, Ye Xie, Runnan Shen, Hongkun Yang, Shaoxu Wu

Urological cancers represent a significant and growing global health challenge. This study aims to provide a comprehensive assessment of the global burden, trends, and inequalities of prostate, bladder, and kidney cancers from 1990 to 2021, and to project their future burden to 2050. Utilizing data from the Global Burden of Disease Study 2021, we analyzed incidence, prevalence, mortality, and disability-adjusted life years (DALYs). We employed joinpoint regression to analyze temporal trends, frontier analysis to evaluate healthcare efficiency, and Bayesian age-period-cohort models to project future burden. Risk factor attributions were also quantified. In 2021, prostate cancer demonstrated the highest age-standardized rates across all metrics. From 1990 to 2021, age-standardized mortality and DALY rates declined for all three cancers. The burden was disproportionately higher among males and older populations, with smoking, high fasting plasma glucose, and high body-mass index identified as leading risk factors. Projections to 2050 indicate a continued decline in all age-standardized rates globally. Despite favorable trends in standardized rates, persistent sex disparities, growing absolute case numbers due to population aging, and the influence of modifiable risk factors necessitate targeted public health interventions and strategic healthcare planning.

泌尿系统癌症是一项重大且日益增长的全球健康挑战。本研究旨在全面评估1990年至2021年前列腺癌、膀胱癌和肾癌的全球负担、趋势和不平等,并预测到2050年它们的未来负担。利用2021年全球疾病负担研究的数据,我们分析了发病率、患病率、死亡率和残疾调整生命年(DALYs)。我们采用连接点回归分析时间趋势,前沿分析评估医疗保健效率,贝叶斯年龄-时期-队列模型预测未来负担。风险因素归因也被量化。2021年,前列腺癌在所有指标中显示出最高的年龄标准化率。从1990年到2021年,所有三种癌症的年龄标准化死亡率和残疾自理年数都有所下降。男性和老年人群的负担更高,吸烟、空腹血糖高和身体质量指数高被确定为主要危险因素。到2050年的预测表明,全球所有年龄标准化比率将继续下降。尽管标准化发病率呈良好趋势,但持续存在的性别差异、人口老龄化导致的绝对病例数不断增加,以及可改变的风险因素的影响,都需要有针对性的公共卫生干预和战略性医疗保健规划。
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引用次数: 0
Charting the Shared Genetic Architecture Between Breast Cancer and Major Depressive Disorder 绘制乳腺癌和重度抑郁症之间的共享遗传结构
Pub Date : 2025-11-26 DOI: 10.1002/mef2.70039
Yilong Lin, Yuning Wang, Ruidan Zhao, Liyi Zhang, Qingmo Yang
<p>Individuals suffering from major depressive disorder (MDD) have been reported to be more susceptible to cancer. A recent meta-analysis revealed that individuals with MDD or anxiety had a moderately elevated likelihood of developing cancer (RR = 1.13, 95% CI = 1.06–1.19) and a higher probability of cancer-related death (RR = 1.21, 95% CI = 1.16–1.26) [<span>1</span>]. The increased susceptibility to cancer among individuals with MDD may arise from multiple mechanisms. On one hand, patients suffering from this disorder are often less likely to participate in early cancer detection and screening programs. On the other hand, dysregulation of neuroendocrine pathways in MDD may further contribute to tumor progression by altering immune function, promoting chronic inflammation, and affecting tumor biology [<span>2</span>].</p><p>Specially, individuals with MDD also had a higher risk of breast cancer compared to those without MDD [<span>3</span>], and those patients with both diseases tended to have poorer BC outcomes [<span>2</span>]. In addition, up to 60% of women experience depression before and throughout their BC diagnosis, affecting women of all races and ages [<span>2</span>]. However, these observational studies may have been affected by confounding factors and biases.</p><p>In this study, we employed a genome-wide cross-trait analysis to chart the shared genetic architecture between BC and MDD, further exploring the genetic and phenotypic relationships. The overview of this study was shown in Figure S1. The genome-wide association studies (GWAS) data of BC and MDD were obtained from The Breast Cancer Association Consortium and Discovery, Biology and Risk of Inherited Variants in Breast Cancer Consortium, and Psychiatric Genomics Consortium. First, we conducted a genetic correlation analysis using linkage disequilibrium score regression (LDSC). Then, we employed two cross-trait meta-analysis methods (the multi-trait analysis of GWAS [MTAG] and the Cross-Phenotype Association analysis [CPASSOC]) to identify common risk SNPs associated with BC and MDD. In addition, pleiotropic analysis under composite null hypothesis (PLACO) was used to identify pleiotropic loci associated with BC and MDD. Based on PLACO analysis, we identified potential pleiotropic loci and genes through Functional Mapping and Annotation of Genetic Associations (FUMA) tool and multimarker analysis of GenoMic annotation (MAGMA) analysis. Finally, we conducted Generalized summary-data-based Mendelian randomization (GSMR) and two-sample Mendelian Randomization (TSMR) to identify the causal associations. MR analysis relies on three core assumptions: (1) the genetic variants used as instrumental variables (IVs) are strongly associated with the exposure; (2) these IVs are independent of confounding factors; and (3) they affect the outcome only through the exposure. The SNPs were selected based on commonly accepted criteria in MR studies: (i) genome-wide significance with a <i>p</i>
据报道,患有重度抑郁症(MDD)的人更容易患癌症。最近的一项荟萃分析显示,患有重度抑郁症或焦虑症的个体患癌症的可能性中等升高(RR = 1.13, 95% CI = 1.06-1.19),癌症相关死亡的可能性较高(RR = 1.21, 95% CI = 1.16-1.26)。重度抑郁症患者对癌症的易感性增加可能有多种机制。一方面,患有这种疾病的患者通常不太可能参与早期癌症检测和筛查项目。另一方面,MDD中神经内分泌通路的失调可能通过改变免疫功能、促进慢性炎症和影响肿瘤生物学来进一步促进肿瘤进展。特别的是,患有重度抑郁症的人患乳腺癌的风险也比没有重度抑郁症的人高,而且患有这两种疾病的患者往往有较差的BC预后。此外,高达60%的女性在BC诊断之前和整个过程中都经历过抑郁症,影响到所有种族和年龄的女性。然而,这些观察性研究可能受到混杂因素和偏差的影响。在这项研究中,我们采用全基因组交叉性状分析来绘制BC和MDD之间的共享遗传结构,进一步探索遗传和表型关系。本研究概述如图S1所示。BC和MDD的全基因组关联研究(GWAS)数据来自乳腺癌协会联盟、乳腺癌协会的发现、生物学和遗传变异风险以及精神病学基因组学联盟。首先,我们使用连锁不平衡评分回归(LDSC)进行了遗传相关分析。然后,我们采用两种跨性状荟萃分析方法(GWAS的多性状分析[MTAG]和跨表型关联分析[CPASSOC])来确定与BC和MDD相关的常见风险snp。此外,采用复合零假设下的多效性分析(PLACO)来鉴定与BC和MDD相关的多效性位点。基于PLACO分析,我们通过功能定位和遗传关联注释(fua)工具和基因组注释的多标记分析(MAGMA)分析确定了潜在的多效位点和基因。最后,我们采用基于广义汇总数据的孟德尔随机化(GSMR)和双样本孟德尔随机化(TSMR)来确定因果关系。核磁共振分析依赖于三个核心假设:(1)作为工具变量(IVs)的遗传变异与暴露密切相关;(2)这些IVs独立于混杂因素;(3)它们仅通过暴露影响结果。根据MR研究中普遍接受的标准选择snp:(i)全基因组显著性,p值为5 × 10−8;(ii)与其他变异的独立性,通过在10mb窗口内去除LD中R2≥0.001的snp来确保;(iii)仪器强度,需要f统计量。无约束截距LDSC分析显示,乳腺癌与MDD之间存在全基因组正相关(rg = 0.0545, SE = 0.0151, P = 3 × 10−4)。随后的敏感性分析与约束截距证实了正遗传相关性(rg = 0.0545, SE = 0.0151, P = 7 × 10−4)。使用MTAG方法,我们分析了BC和MDD的GWAS数据,鉴定出17个具有全基因组意义的snp (P &lt; 5 × 10−8)(表S1)。为了验证MTAG的发现,我们使用CPASSOC进行了多重性分析,鉴定出16470个具有全基因组意义的snp (P &lt; 5 × 10−8)(表S2)。通过PLACO分析,我们鉴定出775个snp具有符合基因组意义的潜在多态性变异(图S2A,表S3)。整合MTAG、CPASSOC和PLACO分析结果后,我们发现MTAG鉴定为全基因组显著的17个snp在CPASSOC和PLACO分析中也保持其显著性(表S4)。基于PLACO结果,MAGMA组织表达分析显示成纤维细胞可能参与了BC和MDD之间的关联(图S2B)。此外,snp对基因的功能影响主要集中在内含子区和基因间区(图1A)。fua分析显示22个独立的基因组风险位点分布在22个不同的染色体区域(图S2C,表S5)。MAGMA分析鉴定出130个显著的多效性基因(表S6)。Gene Ontology结果表明,这些基因在嗅觉感知、钠离子跨膜转运、脂肪细胞增殖调控、成纤维细胞生长因子受体结合等方面发挥着重要作用(图S2D,表S7)。 京都基因与基因组百科全书(KEGG)结果显示,嗅觉转导、wnt信号通路和p53信号通路可能参与了BC和MDD之间的关联(图1B)。此外,这些基因可能导致其他癌症,包括黑色素瘤和胃癌(图1B)。虽然嗅觉转导最初可能与MDD-BC合并症无关,但先前的研究已经确定了嗅觉受体(ORs)与乳腺癌进展之间的潜在联系。例如,据报道,两个OR基因OR2W3和OR2B6可能与乳腺癌的进展有关。此外,抑郁症与嗅觉功能受损密切相关,而嗅觉功能受损往往伴随着显著的社交功能障碍。总之,我们的富集分析表明,MDD和BC发展的共同神经内分泌或感觉信号失调。最后,我们通过MR分析探讨了BC与MDD之间的因果关系。GSMR分析显示,MDD患者发生BC的风险显著增加(OR = 1.27, 95% CI: [1.11-1.46], P = 5.90 × 10−4,图1C,D)。TSMR的逆方差加权(IVW)方法验证了因果关系(OR = 1.12, 95% CI: [1.02-1.22], P = 5.90 × 10−4,图1C,E)。虽然MR-Egger回归和加权中位数方法的结果没有统计学意义,但它们的效应估计与IVW分析的结果方向一致,支持IVW研究结果的稳健性(表S8)。敏感性分析提示TSMR结果不受水平多效性的影响(p = 0.75)。然而,我们在任何方法中都没有发现BC对MDD的显著因果关系(图1C, p &gt; 0.05)。因此,这些MR结果提供了一致的证据,表明MDD可能会导致BC的风险增加,强调了从MDD到肿瘤发展的潜在单向因果途径。鉴于几个方法学上的局限性,我们应该谨慎地解释MR的发现。尽管我们采用了严格的聚集阈值,并使用了多种互补的MR方法,包括IVW、MR- egger回归和加权中位数,以减轻潜在的水平多效性,但残留偏倚不能完全排除。值得注意的是,水平多效性试验没有显示显著的水平多效性,MR-Egger和加权中位数方法的效应估计与IVW结果方向一致,支持了我们研究结果的稳健性。此外,所有数据集都来自欧洲血统的人群,这最大限度地减少了人口分层的影响,但可能会限制我们的结果推广到其他种族群体。最后,观察到的混杂因素,如生活方式或社会经济因素,不能直接被遗传工具捕获,仍然可能有助于观察到的关联。我们的研究绘制了BC和MDD之间的共同遗传结构,并探讨了它们之间潜在的因果关系。这些发现加强了对BC和MDD共同涉及的遗传途径的理解,突出了它们之间复杂的相互联系。这项研究为旨在开发新的BC和MDD预防措施和治疗干预措施的实验研究提供了有价值的见解。林一龙撰写了初稿,并分析了主要数据。王玉宁和赵瑞丹收集数据。张立毅和杨庆谟对论文进行了修改,并监督了整个研究过程。所有作者都阅读并批准了最终稿件。本研究利用了来自参与者研究的公开数据,这些数据已经得到了人体实验伦理标准委员会的批准,从而消除了单独的伦理批准的需要。不适用。作者声明无利益冲突。支持本研究结果的数据可在本文的支持材料中获得。
{"title":"Charting the Shared Genetic Architecture Between Breast Cancer and Major Depressive Disorder","authors":"Yilong Lin,&nbsp;Yuning Wang,&nbsp;Ruidan Zhao,&nbsp;Liyi Zhang,&nbsp;Qingmo Yang","doi":"10.1002/mef2.70039","DOIUrl":"https://doi.org/10.1002/mef2.70039","url":null,"abstract":"&lt;p&gt;Individuals suffering from major depressive disorder (MDD) have been reported to be more susceptible to cancer. A recent meta-analysis revealed that individuals with MDD or anxiety had a moderately elevated likelihood of developing cancer (RR = 1.13, 95% CI = 1.06–1.19) and a higher probability of cancer-related death (RR = 1.21, 95% CI = 1.16–1.26) [&lt;span&gt;1&lt;/span&gt;]. The increased susceptibility to cancer among individuals with MDD may arise from multiple mechanisms. On one hand, patients suffering from this disorder are often less likely to participate in early cancer detection and screening programs. On the other hand, dysregulation of neuroendocrine pathways in MDD may further contribute to tumor progression by altering immune function, promoting chronic inflammation, and affecting tumor biology [&lt;span&gt;2&lt;/span&gt;].&lt;/p&gt;&lt;p&gt;Specially, individuals with MDD also had a higher risk of breast cancer compared to those without MDD [&lt;span&gt;3&lt;/span&gt;], and those patients with both diseases tended to have poorer BC outcomes [&lt;span&gt;2&lt;/span&gt;]. In addition, up to 60% of women experience depression before and throughout their BC diagnosis, affecting women of all races and ages [&lt;span&gt;2&lt;/span&gt;]. However, these observational studies may have been affected by confounding factors and biases.&lt;/p&gt;&lt;p&gt;In this study, we employed a genome-wide cross-trait analysis to chart the shared genetic architecture between BC and MDD, further exploring the genetic and phenotypic relationships. The overview of this study was shown in Figure S1. The genome-wide association studies (GWAS) data of BC and MDD were obtained from The Breast Cancer Association Consortium and Discovery, Biology and Risk of Inherited Variants in Breast Cancer Consortium, and Psychiatric Genomics Consortium. First, we conducted a genetic correlation analysis using linkage disequilibrium score regression (LDSC). Then, we employed two cross-trait meta-analysis methods (the multi-trait analysis of GWAS [MTAG] and the Cross-Phenotype Association analysis [CPASSOC]) to identify common risk SNPs associated with BC and MDD. In addition, pleiotropic analysis under composite null hypothesis (PLACO) was used to identify pleiotropic loci associated with BC and MDD. Based on PLACO analysis, we identified potential pleiotropic loci and genes through Functional Mapping and Annotation of Genetic Associations (FUMA) tool and multimarker analysis of GenoMic annotation (MAGMA) analysis. Finally, we conducted Generalized summary-data-based Mendelian randomization (GSMR) and two-sample Mendelian Randomization (TSMR) to identify the causal associations. MR analysis relies on three core assumptions: (1) the genetic variants used as instrumental variables (IVs) are strongly associated with the exposure; (2) these IVs are independent of confounding factors; and (3) they affect the outcome only through the exposure. The SNPs were selected based on commonly accepted criteria in MR studies: (i) genome-wide significance with a &lt;i&gt;p&lt;/i&gt; ","PeriodicalId":74135,"journal":{"name":"MedComm - Future medicine","volume":"4 4","pages":""},"PeriodicalIF":0.0,"publicationDate":"2025-11-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/mef2.70039","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145625976","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Evaluating the Survival Impact of Neoadjuvant Therapy and Development of Personalized Machine Learning Survival Predictive Model for Breast Cancer Patients Eligible for Breast-Conserving Surgery 评估新辅助治疗对符合保乳手术条件的乳腺癌患者的生存影响及个性化机器学习生存预测模型的开发
Pub Date : 2025-11-20 DOI: 10.1002/mef2.70036
Zhicheng Du, Yongqu Zhang, Weibin Li, Xue Zhao, Xueqi Fan, Jingwen Bai, Guojun Zhang

The long-term survival benefit of neoadjuvant therapy (NAT) in breast cancer patients eligible for breast-conserving surgery (BCS) remains uncertain. This retrospective cohort study analyzed 94,677 BCS-eligible patients from the SEER database (2010–2020), including 8565 who received NAT. After propensity score matching (n = 5734 each), NAT significantly improved overall survival (OS) only in patients with triple-negative (HR = 0.79), ER-negative (HR = 0.80), and stage IIA (HR = 0.81) disease. No OS benefit was observed in HER2-positive patients despite high response rates. To guide treatment decisions, two machine learning models using Random Survival Forest were developed to predict 5-year OS, showing good discrimination (C-index: 0.743 for BCS, 0.690 for NAT-BCS). SHAP analysis identified age, stage, and breast subtype as key prognostic factors. Cross-stratification based on predicted OS revealed that 8.9% of BCS patients could benefit from NAT, while 90.8% of NAT-BCS patients might safely omit it. Patients whose treatment matched model recommendations had significantly better survival. These findings suggest that NAT provides limited survival benefit in BCS-eligible patients, with the advantage concentrated in specific subgroups. Predictive modeling offers a clinically useful approach to personalize NAT use, potentially reducing unnecessary treatment while identifying those most likely to benefit.

新辅助治疗(NAT)对符合保乳手术(BCS)条件的乳腺癌患者的长期生存效益仍不确定。这项回顾性队列研究分析了来自SEER数据库(2010-2020)的94,677例bcs合格患者,其中8565例接受了NAT治疗。倾向评分匹配(n = 5734)后,NAT仅在三阴性(HR = 0.79)、er阴性(HR = 0.80)和IIA期(HR = 0.81)患者中显著提高了总生存率(OS)。her2阳性患者尽管反应率高,但未观察到OS获益。为了指导治疗决策,开发了两个使用随机生存森林的机器学习模型来预测5年OS,具有良好的判别性(c指数:BCS为0.743,NAT-BCS为0.690)。SHAP分析确定年龄、分期和乳腺亚型是关键的预后因素。基于预测OS的交叉分层显示8.9%的BCS患者可以从NAT中获益,而90.8%的NAT-BCS患者可以安全地忽略它。治疗符合模型建议的患者生存率明显提高。这些发现表明,NAT在bcs患者中提供有限的生存益处,优势集中在特定的亚组中。预测建模为个性化NAT使用提供了一种临床有用的方法,潜在地减少不必要的治疗,同时确定最有可能受益的治疗。
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引用次数: 0
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MedComm - Future medicine
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