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Genetic performance, heritability, and correlation of traits in new plant type of rice lines for highland ecosystem 高原生态系统水稻新品系的遗传表现、遗传率和性状相关性
Pub Date : 2024-08-29 DOI: 10.1016/j.repbre.2024.08.002
Yusuf Limbongan , Rinaldi Sjahril , Adewidar Marano Pata'dungan , Trisday Yiin Parari

Rice cultivation is crucial in providing global food needs, particularly in highland areas with distinct environmental conditions. Adapting promising rice lines suitable for highland ecosystems is essential to ensure sustainable rice production in such regions. This study assesses the agronomic performance, heritability, and correlation of traits in new promising rice lines adapted to highland ecosystems. The latest promising rice lines are designed with the unique environmental conditions of highland regions in mind. This research was conducted in Buntu Barana’ Village, Tikala Sub-district, with an elevation of 858.4 m above sea level. The study was carried out in rain-fed semi-irrigated paddy fields. The research was conducted from May 2023 to January 2024. The research methodology involves testing various agronomic traits for yield production components of the new type of promising rice lines at different highland locations. The research procedures included the selection of viable seed strains, seeding, fertilization, balanced irrigation, control of plant pest organisms, harvesting, and post-harvesting. Evaluated agronomic traits encompass plant height, days to maturity, number of productive tillers, length of panicles, number of filled grains per panicle, and grain yield. Additionally, heritability analysis is performed to assess the extent to which observed trait variations are attributed to genetic factors. Research findings reveal significant variations in agronomic traits among the new type of promising rice lines. The highest grain yield is achieved in genotype UKIT102-2-056, which is 8.3 tons per hectare of paddy rice. These lines exhibit objective adaptation to the highland ecosystem, with some lines demonstrating superior performance in specific parameters, especially early maturity, namely 97 days after planting. Heritability analysis indicates that certain traits have high heritability levels, suggesting a significant role of genetic factors in controlling these traits. Furthermore, this study unveils correlation patterns among the observed agronomic traits. Significant positive and negative correlations among several traits indicate complex interrelationships among these agronomic characteristics. These findings offer further insights into the relationships between these traits and can be utilized to develop more adaptive rice lines in highland environments.

水稻种植对满足全球粮食需求至关重要,尤其是在环境条件独特的高原地区。改造适合高原生态系统的有前途的水稻品系对确保这些地区的可持续水稻生产至关重要。本研究评估了适应高原生态系统的有潜力水稻新品系的农艺表现、遗传率和性状相关性。最新的水稻品系在设计时考虑到了高原地区独特的环境条件。这项研究在海拔 858.4 米的提卡拉分区 Buntu Barana'村进行。研究在雨水灌溉的半灌溉稻田中进行。研究时间为 2023 年 5 月至 2024 年 1 月。研究方法包括在不同的高原地区测试新型水稻品系的各种农艺性状,以确定其产量。研究程序包括选择可行的种子品系、播种、施肥、平衡灌溉、控制植物病虫害、收割和收割后处理。评估的农艺性状包括株高、成熟天数、高产分蘖数、圆锥花序长度、每圆锥花序灌浆粒数和谷物产量。此外,还进行了遗传率分析,以评估观察到的性状变化在多大程度上归因于遗传因素。研究结果表明,新型水稻品系的农艺性状差异很大。产量最高的是基因型 UKIT102-2-056,每公顷水稻产量为 8.3 吨。这些品系表现出对高原生态系统的客观适应性,其中一些品系在特定参数上表现优异,尤其是早熟性,即插秧后 97 天。遗传力分析表明,某些性状具有较高的遗传力水平,表明遗传因素在控制这些性状方面发挥了重要作用。此外,这项研究还揭示了所观察到的农艺性状之间的相关模式。多个性状之间存在显著的正相关和负相关,表明这些农艺性状之间存在复杂的相互关系。这些发现进一步揭示了这些性状之间的关系,可用于在高原环境中培育适应性更强的水稻品系。
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引用次数: 0
Multivariate analysis and image-based phenotyping of cayenne fruit traits in selection and diversity mapping of multiple F1 cross lines 在多个 F1 杂交品系的选择和多样性制图中对辣椒果实性状进行多变量分析和基于图像的表型分析
Pub Date : 2024-08-21 DOI: 10.1016/j.repbre.2024.08.001
Muhammad Fuad Anshori , Yunus Musa , Novaty Eny Dungga , Nuniek Widiayani , Arfina Sukmawati Arifin , A. Masniawati , Firmansyah , Muh Farid , Andi Dirpan , Andi Isti Sakinah , Nirwansyah Amier

The phenomenon of fluctuating chili prices can be resolved in stages, one of which is through multiple crosses. However, this cross requires precise methods in the evaluation and selection process, especially regarding fruit characteristics. Image-based phenotyping 4.0 approaches can increase the potential precision of such evaluation genotypes, especially when this approach is combined with multivariate analysis. Therefore, both methods are needed to evaluate and select these cayenne multiple crosses. This research aims to identify the effectiveness of multivariate analysis and image-based explanatory characteristics of fruit phenotypes and to select multiple crosses that can continue to the F2 generation. The research was designed with a randomized complete block design of ten F1 multiple cross-genotypes and four check varieties. Each genotype was repeated three times, so there were 42 experimental units. Based on the results, multivariate was considered adequate in determining image explanatory characters based on fruit phenotype and genotype mapping of the population diversity of multiple crosses of cayenne pepper. The characteristics of fruit height, fruit area, and fruit Intden are image-based explanatory characters that can map the completeness of cayenne pepper fruit between multiple crosses well. This indicates that image-based phenotyping and multivariate analysis can provide more detailed image information of the potential of cayenne fruit from multiple crosses than just based on fruit weight. Therefore, both approaches are recommended for analyzing cayenne paper fruit potential, especially for multiple crosses. In addition, three crosses (MC4, MC8, and MC9) are optimal for the next generation to be recommended and continued.

辣椒价格波动的现象可以分阶段解决,其中之一就是通过多次杂交。然而,这种杂交需要在评估和选择过程中采用精确的方法,特别是在果实特征方面。基于图像的表型 4.0 方法可以提高这种评估基因型的潜在精确度,尤其是当这种方法与多元分析相结合时。因此,需要这两种方法来评估和选择这些卡宴多重杂交品种。本研究旨在确定多变量分析和基于图像的果实表型解释特征的有效性,并选择可延续到 F2 代的多交种。研究采用随机完全区组设计,包括 10 个 F1 多交基因型和 4 个对照品种。每个基因型重复三次,因此共有 42 个实验单元。根据结果,多变量被认为足以确定基于果实表型的图像解释特征和辣椒多交群体多样性的基因型图谱。果实高度、果实面积和果实内径是基于图像的解释性特征,能很好地映射辣椒果实在多个杂交种之间的完整性。这表明,基于图像的表型分析和多元分析能提供比仅根据果实重量更详细的图像信息,说明多个杂交品种的辣椒果实的潜力。因此,建议用这两种方法来分析辣椒纸果实的潜力,尤其是多次杂交的果实。此外,三个杂交品种(MC4、MC8 和 MC9)是推荐和继续进行下一代杂交的最佳选择。
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引用次数: 0
Population genetic characteristics of two crucian carp varieties derived from distant hybridization 两个鲫鱼远缘杂交品种的种群遗传特征
Pub Date : 2024-08-07 DOI: 10.1016/j.repbre.2024.07.002
Wenjie Luo , Xuexue Huang , Xiaowei Xu , Chenghua Dai , Qiong Liu , Yating Zhu , Duansheng Wu , Shi Wang , Qingfeng Liu , Conghui Yang

The Hefang crucian carp (HFJ) derived from Carassius cuvieri (♀) × C. auratus red var. (♂) and the crucian carp-like homodiploid fish (NCRC) derived from Cyprinus carpio (♀) × Megalobrama amblycephala (♂) are important germplasm resources of crucian carp. To investigate the population characteristics and reveal the current genetic situations of these hybrid varieties, we sequenced one nuclear molecular marker transferrin (Tf) among six Carassius populations, which included two hybrid varieties (HFJ and NCRC), one laboratory variety (red crucian carp, RCC) and three wild populations. A total of 166 distinct Tf alleles (A1∼A166) were identified, with sequence lengths ranging from 1145 bp to 1244 bp. Unexpectedly, the nucleotide diversity of Tf alleles in cultured populations (HFJ, NCRC, and RCC) exceeded that of wild populations. The phylogenetic reconstruction analysis results showed that HFJ and C. cuvieri were closely related, but they could not be separated from C. auratus. Besides, while most Tf alleles of NCRC and other Carassius populations were intermixed in five clades, two Tf alleles, together with Cy. carpio, formed a distinct monophyletic clade. Moreover, network and genetic structure analyses failed to distinguish between wild and cultured populations. Although AMOVA analysis based on Tf alleles indicated genetic differentiation among all six populations, the majority of the genetic variation (92.00 %) was observed within populations. Furthermore, the population dynamics analysis suggested that these populations have maintained relative stability in recent history. Therefore, the elevated nucleotide diversity of Tf alleles in cultured populations, the ambiguous population structure, and the limited genetic divergence among the six Carassius populations highlighted the hybrid genetic characteristics of HFJ and NCRC. These findings, based on Tf alleles, differ from the results obtained using mitochondrial gene markers, providing an alternative perspective for germplasm evaluation of hybrid varieties and crucian carp breeding.

由鲫鱼(♀)×鲫鱼红变种(♂)衍生的鹤坊鲫(HFJ)和由鲤鱼(♀)×鲫鱼红变种(♂)衍生的类鲫同源二倍体鱼(NCRC)是鲫鱼的重要种质资源。为了研究这些杂交品种的种群特征并揭示其遗传现状,我们对6个鲫鱼种群中的一个核分子标记转铁蛋白(Tf)进行了测序,其中包括2个杂交品种(HFJ和NCRC)、1个实验室品种(红鲫,RCC)和3个野生种群。共鉴定出 166 个不同的 Tf 等位基因(A1∼A166),序列长度从 1145 bp 到 1244 bp 不等。出乎意料的是,培养种群(HFJ、NCRC 和 RCC)中 Tf 等位基因的核苷酸多样性超过了野生种群。系统进化重建分析结果表明,HFJ与C. cuvieri亲缘关系密切,但不能从C. auratus中分离出来。此外,NCRC和其他鲫鱼种群的大多数Tf等位基因混杂在五个支系中,但有两个Tf等位基因与鲤鱼一起形成了一个独特的单系支系。此外,网络和遗传结构分析未能区分野生种群和养殖种群。虽然基于 Tf 等位基因的 AMOVA 分析表明所有六个种群之间存在遗传分化,但大多数遗传变异(92.00 %)都是在种群内部观察到的。此外,种群动态分析表明,这些种群在最近的历史中保持了相对稳定。因此,养殖种群中 Tf 等位基因核苷酸多样性的升高、种群结构的模糊性以及六个鲫鱼种群之间有限的遗传差异突出了 HFJ 和 NCRC 的杂交遗传特征。这些基于Tf等位基因的研究结果不同于线粒体基因标记的结果,为杂交品种的种质评价和鲫鱼育种提供了另一种视角。
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引用次数: 0
Supplemental effect of wild strawberry (Fragaria vesca) pulp extract in extender to enhance quality attributes of cryopreserved bovine sperms 在扩展剂中添加野草莓(Fragaria vesca)果肉提取物对提高冷冻保存牛精子质量属性的补充作用
Pub Date : 2024-07-13 DOI: 10.1016/j.repbre.2024.06.004
Khawaja Raees Ahmad , Sadia Suleman , Fiza Malik , Muhammad Ali Kanwal , Syeda Nadia Ahmad , Sidra Yasmeen , Iram Inayat , Asma Younis , Kausar Raees

The use of herbal bio-actives and phyto-contents to increase livestock productivity is a revived interest in veterinary research. The effect of wild strawberry {Fragaria vesca (FV)} pulp extract (PE) as antioxidant supplement in bovine semen cryopreservation diluent was explored. The experiment involved three fertile bulls. Three semen ejaculates per animal were collected. Each sample was diluted with Semen Transportation Diluent (STD) in 1:2 ratio. The (semen + STD) sample was vortexed and centrifuged (at 32g for 15 min) to remove 50 % supernatant. The remaining sample was re-diluted with semen cryopreservation diluent (SCD) in the ratio 1:4. Three aliquots of 0.3 ml were set aside from each (semen + STD + SCD) sample and were further treated with; 1: 0.7 mL of SCD (SCD group); 2: 0.7 mL SCD and 0.8 % FV-PE (FV-PE 0.8) and; 3: 0.7 mL SCD and 1.6 % FV-PE (FV-PE 1.6). Sperm quality parameters were evaluated before and after 48 h of cryopreservation. Results showed significantly enhanced mean percentage of sperm viability, progressive motility, velocity and fertilizability in FV-PE 0.8 and FV-PE 1.6 groups as compared with SCD group. The findings propose the protective and ameliorative potential of FV-PE for cryopreserved bovine sperms.

利用草本生物活性物质和植物成分提高牲畜生产率是兽医研究领域的一个新热点。本研究探讨了野生草莓{Fragaria vesca (FV)} 果肉提取物(PE)作为牛精液冷冻稀释液中抗氧化剂补充剂的效果。实验涉及三头能育公牛。每头公牛采集三次精液。每个样本都按 1:2 的比例用精液运输稀释液(STD)稀释。将(精液 + STD)样本涡旋离心(32 克离心 15 分钟),去除 50% 的上清液。剩余样品用精液冷冻稀释液(SCD)按 1:4 的比例重新稀释。从每个(精液 + STD + SCD)样本中留出三份 0.3 毫升的等分试样,分别用:1:0.7 毫升 SCD(SCD 组);2:0.7 毫升 SCD 和 0.8 % FV-PE(FV-PE 0.8);3:0.7 毫升 SCD 和 1.6 % FV-PE(FV-PE 1.6)进一步处理。在冷冻保存 48 小时前后对精子质量参数进行了评估。结果显示,与 SCD 组相比,FV-PE 0.8 和 FV-PE 1.6 组的精子存活率、活动力、速度和受精率的平均百分比均有明显提高。研究结果表明,FV-PE 对冷冻保存的牛精子具有保护和改善作用。
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引用次数: 0
Genetic parameter estimates for growth traits in Texel sheep of Brazil 巴西特克塞尔羊生长特征的遗传参数估计
Pub Date : 2024-07-10 DOI: 10.1016/j.repbre.2024.07.001
Ali William Canaza-Cayo , Fernando Amarilho Silveira , Roxana Churata-Huacani , Júlio Sílvio de Sousa Bueno Filho

The present study aimed to estimate the genetic parameters for direct and maternal influences on birth weight (BW), weaning weight (WW) and postweaning weight (PW) of Texel sheep, raised in an extensive system from Brazil. Data file used in this study consisted of 834 body weight records of 834 Texel lambs (376 males and 458 females) born from 2020 to 2021, offspring of 475 ewes and 45 rams. Multivariate animal model was conducted to estimate the variance components, heritability and genetic correlations using the restricted maximum likelihood method in ASReml-R software, while the effects of fixed factors were analyzed by the general linear model procedure of statistical analysis system. Five different animal models, with or without maternal genetic effect, maternal permanent environment effect and covariance between additive genetic and maternal genetic effects, were fitted on the growth traits data of the Texel sheep population. AIC and BIC test results were used to evaluate the best fit models for growth traits. The effect of lamb's sex was significant on BW, WW and PW while birth type and year of lambing effects were on all traits (P < 0.05). Model 4, incorporating direct additive genetic, maternal additive genetic and maternal permanent environmental effects showed the minimum AIC estimate for all growth traits. The direct additive genetic heritability for BW, WW and PW were 0.11 ± 0.03, 0.37 ± 0.05 and 0.31 ± 0.08, respectively and maternal heritability for these traits were 0.00 ± 0.00, 0.04 ± 0.02 and 0.00 ± 0.00, respectively. The total heritability estimates for BW, WW and PW were 0.11 ± 0.03, 0.39 ± 0.05 and 0.31 ± 0.08, respectively. The estimates of the direct additive genetic correlation between BW-WW, BW-PW and WW-PW were 0.68 ± 0.12, 0.66 ± 0.12 and 0.78 ± 0.07, respectively. The maternal permanent environmental correlation between BW-WW, BW-PW and WW-PW were 0.38 ± 0.27, 0.29 ± 0.20 and 0.74 ± 0.16, respectively. Phenotypic correlation ranged from 0.43 ± 0.03 to 0.75 ± 0.02. It is concluded that due to the existence of genetic variation for BB, WW and PW and strong genetic correlation among them, genetic progress for these traits is possible by selection in Texel sheep from Brazil.

本研究旨在估算在巴西大范围系统中饲养的德克塞尔绵羊出生体重(BW)、断奶体重(WW)和断奶后体重(PW)的直接和母体影响的遗传参数。本研究使用的数据文件包括 2020 年至 2021 年出生的 834 只德克塞尔羔羊(376 只雄性和 458 只雌性)的体重记录,这些羔羊是 475 只母羊和 45 只公羊的后代。使用 ASReml-R 软件中的限制最大似然法建立了多变量动物模型,以估计方差成分、遗传率和遗传相关性,并使用统计分析系统的一般线性模型程序分析了固定因素的影响。对特克赛尔绵羊群体的生长性状数据拟合了五个不同的动物模型,包括有无母系遗传效应、母系永久环境效应以及加性遗传效应和母系遗传效应之间的协方差。使用 AIC 和 BIC 检验结果来评估生长性状的最佳拟合模型。羔羊性别对体重、每头重和每头胸围的影响显著,而出生类型和产羔年份对所有性状的影响均显著(P < 0.05)。模型 4 包含直接加性遗传效应、母本加性遗传效应和母本永久环境效应,对所有生长性状的 AIC 估计值最小。BW、WW 和 PW 的直接附加遗传力分别为 0.11 ± 0.03、0.37 ± 0.05 和 0.31 ± 0.08,这些性状的母源遗传力分别为 0.00 ± 0.00、0.04 ± 0.02 和 0.00 ± 0.00。体重、膘情和脉搏的总遗传力估计值分别为 0.11 ± 0.03、0.39 ± 0.05 和 0.31 ± 0.08。BW-WW、BW-PW 和 WW-PW 之间的直接加性遗传相关估计值分别为 0.68 ± 0.12、0.66 ± 0.12 和 0.78 ± 0.07。BW-WW、BW-PW 和 WW-PW 之间的母源永久环境相关性分别为 0.38 ± 0.27、0.29 ± 0.20 和 0.74 ± 0.16。表型相关性介于 0.43 ± 0.03 和 0.75 ± 0.02 之间。结论是,由于 BB、WW 和 PW 存在遗传变异,且它们之间有很强的遗传相关性,因此在巴西特克塞尔绵羊中可以通过选育实现这些性状的遗传进步。
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引用次数: 0
Comparative study of hypoxic tolerance between the hybrids of white crucian carp (♀) × red crucian carp (♂) and its parents 白鲫(♀)×红鲫(♂)杂交种与亲本耐缺氧性比较研究
Pub Date : 2024-07-09 DOI: 10.1016/j.repbre.2024.06.001
Kaikun Luo , Yu Deng , Lingmei Han , Shengwei Wang, Yirui Zhang, Zhonghua Pen, Ting Liu, Chang Wang, Chengxi Liu, Min Tao, Chun Zhang, Rurong Zhao, Jing Wang

The hybrid of female white crucian carp (Carassius auratus cuvieri, WCC) × male red crucian carp (Carassius auratus red var. RCC) (WR), combines desirable characteristics of both parents, including tender meat, rapid growth rate, and strong resistance. To test the hypoxia tolerance of WR, an experiment of exposure to hypoxic conditions was conducted on WR, RCC, and WCC. The results showed that WR and RCC exhibited stronger hypoxia tolerance capacity compared to WCC. The strong resistance to hypoxia of WR and RCC was manifested by the absence of damage to the hepatopancreas after hypoxia, and the fish can adapt to the hypoxic environment by enhancing the hematopoietic function of hematopoietic tissue, remodeling gill morphology, and activating the antioxidant system. By contrast, after hypoxia, the number of red blood cells and the concentration of hemoglobin in the blood of WCC decreased, and the hepatopancreas was seriously damaged, indicating that the WCC is not as tolerant to low oxygen conditions as RCC and WR.

雌性白鲫(Carassius auratus cuvieri,WCC)×雄性红鲫(Carassius auratus red var. RCC)的杂交种(WR)兼具亲本的肉质细嫩、生长速度快、抗逆性强等优良特性。为了测试 WR 的耐缺氧性,对 WR、RCC 和 WCC 进行了缺氧条件下的暴露实验。结果表明,与 WCC 相比,WR 和 RCC 表现出更强的耐缺氧能力。WR和RCC的耐缺氧能力强表现在缺氧后肝胰脏无损伤,并能通过增强造血组织的造血功能、重塑鳃的形态和激活抗氧化系统来适应缺氧环境。相比之下,缺氧后 WCC 血液中的红细胞数量和血红蛋白浓度下降,肝胰脏受损严重,表明 WCC 对低氧条件的耐受性不如 RCC 和 WR。
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引用次数: 0
Effects of dietary polyunsaturated fatty acid enriched diets on breeding, embryonic development and organogenesis of Rohu carp, Labeo rohita (Hamilton 1822) 富含多不饱和脂肪酸的日粮对罗非鱼(Labeo rohita (Hamilton 1822) )繁殖、胚胎发育和器官形成的影响
Pub Date : 2024-07-03 DOI: 10.1016/j.repbre.2024.06.003
Shahanaj Parvin Rumki , Mohammad Moniruzzaman , Md Saddam Hossain , Tutul Kumar Saha , Anika Tabassum , Maria Binte Moin , Shaon Kumar Mondol , Sadia Ibnat , Sungchul C. Bai , Taesun Min , Zakir Hossain

There is a considerable interest in supplementing fish diets with bio-functional substances such as polyunsaturated fatty acids (PUFAs), and research is being conducted to evaluate their effects on fish physiology, particularly on breeding performances. The objective of this study was to find out how squid-derived lipids (PUFAs) influence the Rohu carp, Labeo rohita, in terms of reproduction, and embryonic and larval growth. The experimental fish were provided with formulated diet for a duration of 90 days, containing 1 % squid-extracted lipids as a primary source of polyunsaturated fatty acids (PUFAs). To determine the accuracy of the formulation, a proximate analysis of the feed ingredients and the formulated feeds were conducted. The results demonstrated remarkable reproductive outcomes during the spawning trial. Observations in fish treated with PUFAs revealed a significant improvement (p < 0.001) in sperm quality and viability, despite spawning occurring late in the breeding season. In addition, the fertilization rate (92.27 ± 1.74), hatching rate (89.33 ± 1.76), and survival rate (85.83 ± 1.74) of the offspring exhibited a statistically significant increase (p < 0.05) when subjected to PUFAs treatment in L. rohita. Consequently, the treated fish exhibited enhanced early embryonic and larval development in comparison to the control group. Hence, the current study demonstrates that the inclusion of PUFAs in the diet of Rohu carp leads to improved maturation, breeding, and developmental outcomes, specifically in terms of embryonic development and organogenesis.

人们对在鱼类日粮中添加生物功能物质(如多不饱和脂肪酸 (PUFA))产生了浓厚的兴趣,并正在开展研究以评估这些物质对鱼类生理,尤其是繁殖性能的影响。本研究的目的是了解鱿鱼衍生脂质(PUFAs)如何影响罗非鱼(Labeo rohita)的繁殖、胚胎和幼鱼生长。为实验鱼提供了为期 90 天的配方饲料,其中含有 1%的鱿鱼提取脂质作为多不饱和脂肪酸(PUFAs)的主要来源。为了确定配方的准确性,对饲料原料和配方饲料进行了近似分析。结果表明,在产卵试验期间,鱼类的繁殖效果显著。对使用 PUFAs 的鱼类的观察表明,尽管产卵发生在繁殖季节的后期,但精子质量和存活率都有显著提高(p < 0.001)。此外,鲤鱼经 PUFAs 处理后,其受精率(92.27 ± 1.74)、孵化率(89.33 ± 1.76)和后代存活率(85.83 ± 1.74)均有显著提高(p < 0.05)。因此,与对照组相比,经处理的鱼类在早期胚胎和幼体发育方面均有所提高。因此,目前的研究表明,在罗非鱼日粮中添加 PUFAs 可改善其成熟、繁殖和发育结果,特别是在胚胎发育和器官形成方面。
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引用次数: 0
Mitochondrial DNA (mtDNA) genetic variability of cytochrome B gene (CYTB) in three populations of native rabbits in Egypt 埃及三个土兔种群细胞色素 B 基因 (CYTB) 的线粒体 DNA (mtDNA) 遗传变异性
Pub Date : 2024-06-14 DOI: 10.1016/j.repbre.2024.06.002
Hesham Y.A. Darwish , Emam A.M.

The current study aimed to detect the genetic variability of mitochondrial DNA (mtDNA) cytochrome B (CYTB) gene in 80 native Egyptian rabbits (NER) belonging to three populations in three different agriculture regions (Delta, Middle, and Upper Egypt) and also investigate the origin of these breeds by phylogenetic relationship analysis. A total of 62 haplotypes were recorded among the three NER populations. The native Upper Egypt rabbits (NUER) expressed the highest number of haplotypes, mutations, polymorphic sites, and haplotype diversity (23, 55, 51, and 1.00, respectively). While it gave the lowest values of nucleotide diversity (0.0262) and Tajima's D (−0.01435), the percentage of mutual haplotypes was 4.8 % between the Middle and Delta Egypt populations. The phylogenetic analysis showed that there were more separated haplotypes of NUER compared to other populations. The same finding was also observed when supported by 31 sequences of different rabbit breeds retrieved from the GeneBank database. A mutual haplotype was observed between native Delta Egyptian rabbits (NDER) and New Zealand (NWZ) rabbits. The results of this study shed light on the importance of indigenous breeds in rural areas through mtDNA, which contributes to finding sustainable strategies to conserve and improve genetic resources in Egyptian rural areas.

本研究旨在检测分属三个不同农业区(三角洲、中埃及和上埃及)三个种群的 80 只土生埃及兔(NER)的线粒体 DNA(mtDNA)细胞色素 B(CYTB)基因的遗传变异性,并通过系统发育关系分析研究这些品种的起源。在三个 NER 种群中,共记录到 62 个单倍型。上埃及本地兔(NUER)的单倍型数量、突变、多态位点和单倍型多样性最高(分别为 23、55、51 和 1.00)。虽然核苷酸多样性(0.0262)和塔吉玛 D 值(-0.01435)最低,但中埃及种群和三角洲埃及种群之间的相互单倍型比例为 4.8%。系统进化分析表明,与其他种群相比,NUER 有更多的分离单倍型。从基因库(GeneBank)数据库中检索到的不同兔种的 31 个序列也显示了同样的结果。在三角洲埃及兔(NDER)和新西兰兔(NWZ)之间观察到了相互的单倍型。这项研究的结果通过 mtDNA 揭示了农村地区本土品种的重要性,有助于找到保护和改良埃及农村地区遗传资源的可持续战略。
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引用次数: 0
Report of a case of infertility with infantile uterus 不孕症合并幼稚子宫病例报告
Pub Date : 2024-05-24 DOI: 10.1016/j.repbre.2024.04.001
Dongyun Liang , Yan Gao

Acupuncture, moxibustion, and traditional Chinese medicine (TCM) have demonstrated good effects in treating refractory gynecological infertility. This case involved an advanced-stage patient diagnosed with an infantile uterus and categorized as having primary infertility. An in vitro fertilization (IVF) center initially declined treatment, suggesting adoption as an alternative. After six months of acupuncture, moxibustion, and Chinese herbal therapy, the patient achieved a successful pregnancy. She subsequently gave birth to a healthy baby boy via caesarean section at full term. The combined use of acupuncture and TCM significantly improved the constitution of this patient with an infantile uterus.

针灸和中药在治疗难治性妇科不孕症方面具有良好的疗效。本病例涉及一名被诊断为幼稚型子宫的晚期患者,并被归类为原发性不孕症。体外受精(IVF)中心最初拒绝了治疗,建议采用收养作为替代方案。经过 6 个月的针灸和中药治疗后,患者成功怀孕。随后,她通过剖腹产顺利产下一名健康男婴。针灸和中药的结合使用极大地改善了这位患有幼稚子宫的患者的体质。
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引用次数: 0
Molecular cloning and expression analysis of the mstn and myod genes in the hybrids derived from Megalobrama amblycephala × Xenocypris davidi Bleeker 驼背蛙(Megalobrama amblycephala)×大蛙(Xenocypris davidi Bleeker)杂交种中 mstn 和 myod 基因的分子克隆和表达分析
Pub Date : 2024-05-13 DOI: 10.1016/j.repbre.2024.05.001
Siyu Fan , Ting Li , Zhong Tang , Zhifeng Zhou, Xin Deng, Lu Huang, Xinge Ouyang, Faxian Yu, Xiangqiong Yang, Liran Zhang, Min Tao

The hybrids (BY) derived from blunt snout bream (Megalobrama amblycephala, BSB, ♀) and Bleeker's yellow tai (Xenocypris davidi Bleeker, YT, ♂) have a fast growth rate and body thickness. However, the molecular mechanisms underlying the growth advantage of BY are still unclear. MSTN, a member of the TGF-β superfamily, is a negative regulator of muscle growth and development. MYOD, a member of the myogenic regulatory factor family (MRFs), is a positive regulator of muscle growth and development. MSTN and MYOD interact to co-regulate muscle growth and development. In this study, we cloned the full-length cDNAs of mstn and myod in BY, analyzed differential expression of the two genes in muscle of BY and its parents, and observed the localization of the two genes during embryonic development of BY. Multiple sequence alignment of amino acids and phylogenetic analysis showed that mstn and myod were highly conserved in BY, BSB, YT, and other carp family fishes. Quantitative Real-time PCR (qRT-PCR) showed that mstn and myod were primarily expressed in muscle of BY, and there were significant differences in the expression of the two genes in the red and white muscles of BY, BSB, and YT at different age. The results of in situ hybridization of embryos showed an overlap in the temporal and spatial expression of mstn and myod in BY embryo development, suggesting that the two genes might interact to co-regulate embryo growth and development. This study provides a theoretical basis for further research on the mechanisms of mstn and myod in muscle growth of hybrid fishes.

钝吻鳊(Megalobrama amblycephala, BSB, ♀)和布莱克黄台鱼(Xenocypris davidi Bleeker, YT, ♂)的杂交种(BY)生长速度快,体厚。然而,BY 生长优势的分子机制仍不清楚。TGF-β 超家族成员 MSTN 是肌肉生长和发育的负调控因子。MYOD是肌肉生长调节因子家族(MRFs)的成员,是肌肉生长和发育的正向调节因子。MSTN 和 MYOD 相互作用,共同调控肌肉的生长和发育。本研究克隆了BY中mstn和myod的全长cDNA,分析了这两个基因在BY及其亲本肌肉中的差异表达,并观察了这两个基因在BY胚胎发育过程中的定位。氨基酸多重序列比对和系统进化分析表明,mstn和myod在BY、BSB、YT和其他鲤科鱼类中高度保守。定量实时荧光定量PCR(qRT-PCR)显示,mstn和myod主要在BY的肌肉中表达,且在不同年龄的BY、BSB和YT的红白肌中,这两个基因的表达存在显著差异。胚胎原位杂交结果表明,在BY胚胎发育过程中,mstn和myod的表达在时间和空间上存在重叠,表明这两个基因可能相互作用,共同调控胚胎的生长发育。本研究为进一步研究mstn和myod在杂交鱼类肌肉生长中的作用机制提供了理论依据。
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引用次数: 0
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Reproduction and breeding
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