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Progress on stress resistance breeding in fish 鱼类抗逆育种的进展
Pub Date : 2024-10-02 DOI: 10.1016/j.repbre.2024.09.004
Jie Hu , Jie Yang , Huan Liao
With the continuing development of the aquaculture industry, the stress associated with many environmental factors has severely restricted the growth of fish, reduced fish resistance to disease, and had a large negative impact on fishery production. Therefore, it is of great importance for the sustainable development of aquaculture to cultivate new fish varieties with strong stress resistance. Traditional hybridization and gynogenesis, selective breeding, modern breeding techniques such as molecular marker-assisted breeding and whole genome selection breeding can be used to develop efficient and accurate fish breeding strategies, and to cultivate new fish varieties with high stress resistance. This paper reviews the status of research on fish breeding for disease resistance, cold resistance, high temperature tolerance, hypoxia tolerance, salt tolerance, saline-alkali tolerance as well as non-specific stress resistance traits, analyzes trends in research on fish breeding for stress tolerance, and explores future development directions. Furthermore, this paper proposes new ideas for fish seed industry innovation to promote its continuous and sustainable development.
随着水产养殖业的不断发展,许多环境因素带来的应激严重制约了鱼类的生长,降低了鱼类的抗病能力,对渔业生产产生了较大的负面影响。因此,培育抗逆性强的鱼类新品种对水产养殖业的可持续发展具有重要意义。传统的杂交育种和雌核发育、选择性育种、分子标记辅助育种和全基因组选择育种等现代育种技术可用于制定高效、准确的鱼类育种策略,培育抗逆性强的鱼类新品种。本文综述了鱼类抗病、抗寒、耐高温、耐缺氧、耐盐、耐盐碱以及非特异性抗逆性状的育种研究现状,分析了鱼类抗逆育种的研究趋势,探讨了未来的发展方向。此外,本文还提出了鱼类种业创新的新思路,以促进鱼类种业的持续和可持续发展。
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引用次数: 0
Innovation of carp germplasm and its research progress 鲤鱼种质创新及其研究进展
Pub Date : 2024-09-27 DOI: 10.1016/j.repbre.2024.09.003
Zhipeng Yang , Qinglin Xu , Xin Wang , Huan Liu , Yalan Zhang , Wei Chen , Sijin Fan , Junfeng Wu , Yaohui Li , Huan Zhong , Fangzhou Hu , Ming Wen , Kaikun Luo , Shi Wang
The artificial breeding of carp existed in China 8000 years ago. The breeding of carp played an important role in ancient Chinese history, and it still played a crucial role in modern aquaculture. The output of carp in China is very high, accounting for 8.42 % of the total output of freshwater products in 2023, ranking fifth in the total output of freshwater aquaculture fish. At the same time, carp is also the fish species with the highest number of new varieties bred in China. With the advent of the genomics era, breeding technologies have also made progress. This paper reviews the history and current status of carp farming, the germplasm resources of carp, and the application of fish genetic breeding technology in the germplasm innovation of carp.
早在 8000 年前,中国就有了人工养殖鲤鱼的历史。鲤鱼的养殖在中国古代历史上发挥了重要作用,在现代水产养殖中仍起着至关重要的作用。我国鲤鱼产量很高,2023 年占淡水产品总产量的 8.42%,居淡水养殖鱼类总产量的第五位。同时,鲤鱼也是我国培育新品种最多的鱼类品种。随着基因组学时代的到来,育种技术也在不断进步。本文综述了鲤鱼养殖的历史与现状、鲤鱼种质资源以及鱼类遗传育种技术在鲤鱼种质创新中的应用。
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引用次数: 0
Indigenous cattle biodiversity in India: Adaptation and conservation 印度本土牛的生物多样性:适应与保护
Pub Date : 2024-09-27 DOI: 10.1016/j.repbre.2024.09.001
Sujith Kumar Sarang, Damodaran Sreekumar, Veerasamy Sejian
Indigenous breeds of cattle are suitable for varying climatic conditions of the tropical environment by virtue of a series of species-specific traits and adaptive strategies. Such traits and adaptive strategies could be generally classed into morphological/anatomical, physiological, behavioural, neuro-endocrine, haematological, and molecular and cellular features. At the same time, over the years it is found that the population of indigenous cattle is decreasing at a faster rate all over the world. This is mainly due to the preponderance of crosses of indigenous cattle with exotic/temperate high producing cattle for improved milk production. As a result, if suitable measures are not taken for conserving indigenous breeds of cattle, the diversity will go down drastically and may at one stage become highly endangered in status. For working out conservation plans and breeding strategies, the fundamental requirements include genetic characterization by means of gene and microsatellite markers along with evaluation of genetic variability, population structure and composition. Conserving the diversity of indigenous germplasm will help to choose breeds of cattle that adapt to changing climatic environment. Such an approach could help in formulating strategies for conservation and breeding plans and further could also lay the foundation for effective utilisation of indigenous cattle under different production systems.
本土牛种凭借一系列物种特有的特征和适应策略,适合热带环境的不同气候条件。这些特征和适应策略一般可分为形态/解剖、生理、行为、神经内分泌、血液学以及分子和细胞特征。与此同时,多年来人们发现,世界各地本土牛的数量正在以更快的速度减少。这主要是由于本地牛与外来/温带高产牛杂交,以提高产奶量。因此,如果不采取适当措施保护本土牛种,牛的多样性将急剧下降,并可能在某一阶段成为高度濒危物种。为了制定保护计划和育种战略,基本要求包括通过基因和微卫星标记进行遗传特征描述,同时对遗传变异、种群结构和组成进行评估。保护本土种质的多样性将有助于选择适应不断变化的气候环境的牛种。这种方法有助于制定保护战略和育种计划,还能为在不同生产体系下有效利用本地牛奠定基础。
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引用次数: 0
Study on sperm cryopreservation of hybrid fish derived from Carassius cuvieri (♀) × Carassius auratus red var (♂) 鲫鱼(♀)×红鲫鱼(♂)杂交鱼精子冷冻保存研究
Pub Date : 2024-09-26 DOI: 10.1016/j.repbre.2024.09.002
Qianqian Zeng , Yixuan Chen , Minyi Wang , Yinggang Li , Tao Dai , Weiling Qin , Yating Zhu , Chun Zhang , Yi Zhou , Qinbo Qin , Conghui Yang , Qianhong Gu
Cryopreservation of sperm is an effective method for conserving germplasm resources in fish genetic breeding. The high-quality hybrid fish (WR) derived from white crucian carp (Carassius cuvieri, WCC, ♀) and red crucian carp (C. auratus red var., RCC, ♂), possesses valuable traits such as high survival rates, strong resistance, and rapid growth, representing an important germplasm resources of crucian carp. This study compared the effects of different antifreeze solutions on sperm viability among three varieties (WR, WCC, and RCC) and examined changes in enzyme activity, fertilization rates, and hatching rates after cryopreservation, aiming to enhance the cryogenic sperm cryopreservation technique in hybrid fish and investigate the mechanisms underlying spermatozoa damage caused by cryopreservation. The results showed that the antifreeze combination of D14 with 15 % dimethyl sulfoxide (DMSO) had the best effect in preserving the sperm of WR and WCC, while D20 with 10 % DMSO was the optimal combination for RCC sperm. After ultra-low temperature preservation, the longevity, fertilization, and hatching rates of frozen sperm were significantly lower (P < 0.05) compared to fresh sperm. The enzyme activities of superoxide dismutase (SOD), lactate dehydrogenase (LDH), and creatine kinase (CK) were significantly decreased (P < 0.05) in spermatozoa, whereas they showed a significant increase (P < 0.05) in sperm plasma. Succinate dehydrogenase (SDH) activity was significantly reduced (P < 0.05) in frozen spermatozoa of RCC compared to fresh spermatozoa, and exhibited lower activity in frozen spermatozoa of WCC and WR. Additionally, SDH activity was significantly elevated (P < 0.05) in frozen sperm plasma, and glutathione reductase (GR) activity was significantly lower (P < 0.05) in both frozen sperm plasma and spermatozoa across all three species. The study demonstrated that cryopreservation had a significant effect on the enzyme activities of spermatozoa and sperm plasma in all three species. These findings provide important technical support for the conservation of high-quality fish germplasm resources, particularly for novel varieties resulting from distant hybridization in fish.
冷冻保存精子是鱼类遗传育种中保存种质资源的有效方法。白鲫(Carassius cuvieri,WCC,♀)与红鲫(C. auratus red var.,RCC,♂)的优质杂交鱼(WR)具有成活率高、抗性强、生长快等宝贵性状,是鲫鱼的重要种质资源。本研究比较了不同防冻液对WR、WCC和RCC三个品种精子活力的影响,并考察了冷冻保存后酶活性、受精率和孵化率的变化,旨在提高杂交鱼低温精子冷冻保存技术,探究冷冻保存造成精子损伤的机理。结果表明,D14与15%二甲基亚砜(DMSO)的防冻组合对WR和WCC精子的保存效果最好,而D20与10%二甲基亚砜(DMSO)的防冻组合对RCC精子的保存效果最佳。超低温保存后,冷冻精子的寿命、受精率和孵化率均显著低于新鲜精子(P < 0.05)。精子中的超氧化物歧化酶(SOD)、乳酸脱氢酶(LDH)和肌酸激酶(CK)的酶活性明显降低(P < 0.05),而精子血浆中的酶活性则明显升高(P < 0.05)。与新鲜精子相比,RCC 的冷冻精子中琥珀酸脱氢酶(SDH)活性明显降低(P < 0.05),而 WCC 和 WR 的冷冻精子中的琥珀酸脱氢酶活性较低。此外,冷冻精浆中的 SDH 活性明显升高(P < 0.05),而所有三个物种的冷冻精浆和精子中的谷胱甘肽还原酶(GR)活性都明显降低(P < 0.05)。研究表明,低温保存对所有三个物种的精子和精浆的酶活性都有显著影响。这些研究结果为保护优质鱼类种质资源,尤其是保护鱼类远缘杂交产生的新品种提供了重要的技术支持。
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引用次数: 0
The expression and function of gpr54a and gpr54b in allotriploid crucian carp and diploid red crucian carp (Carassius auratus red var.) gpr54a和gpr54b在异源三倍体鲫鱼和二倍体红鲫鱼中的表达和功能
Pub Date : 2024-09-26 DOI: 10.1016/j.repbre.2024.08.004
Lu Huang , Qiubei Wang , Shuxin Zhang, Faxian Yu, Shengnan Li, Huan Zhong, Rurong Zhao, Min Tao
The kisspeptin receptor (GPR54), a member of the G-protein-coupled receptors, plays a central role in regulating reproduction. However, research on GPR54 in allotriploid fish remains limited. In this study, we reported the full-length cDNAs, tissue expression, and localization of gpr54a and gpr54b in allotriploid crucian carp (ACC) and diploid red crucian carp (Carassius auratus red var., RCC). The full-length cDNAs of gpr54a in ACC and RCC were 2224 bp and 2218 bp, respectively. The full-length cDNAs of gpr54b in ACC and RCC were 1413 bp and 1182 bp, respectively. qRT-PCR revealed that ACC gpr54a and RCC gpr54a were highly expressed in the brain but had lower expression in peripheral tissues. Unlike gpr54a, ACC gpr54b and RCC gpr54b were highly expressed in the brain, liver, and muscle. During the breeding season, the expression of gpr54a in ACC was significantly lower than in RCC, but gpr54b had significantly higher expression in ACC than in RCC in the HPG axis. This finding suggested that gpr54a might promote ovarian development, while gpr54b might inhibit ovarian development. During the breeding season, ISH indicated abnormal ovarian development in ACC and found signals of gpr54a and gpr54b in several regions of the brain, pituitary, and ovary of ACC and RCC. These regions of the brain, pituitary, and ovary are associated with the secretion of several hormones related to reproductive regulation. Hence, we hypothesized that the lower expression of gpr54a and higher expression of gpr54b in ACC might be involved in sterility by regulating the secretion of reproductive hormones. This study suggested that gpr54a and gpr54b might function oppositely in regulating reproduction. In conclusion, these findings will aid in further investigating the functions of GPR54 and provide a theoretical basis for studying ACC sterility.
吻肽素受体(GPR54)是 G 蛋白偶联受体的一种,在调节繁殖方面发挥着核心作用。然而,对三倍体鱼类中 GPR54 的研究仍然有限。在这项研究中,我们报道了gpr54a和gpr54b在异源三倍体鲫鱼(ACC)和二倍体红鲫(Carassius auratus red var.)ACC和RCC中gpr54a的全长cDNA分别为2224 bp和2218 bp。qRT-PCR显示,ACC gpr54a和RCC gpr54a在大脑中的表达量较高,但在外周组织中的表达量较低。与 gpr54a 不同,ACC gpr54b 和 RCC gpr54b 在大脑、肝脏和肌肉中高表达。在繁殖季节,gpr54a在ACC中的表达量明显低于RCC,但在HPG轴中,gpr54b在ACC中的表达量明显高于RCC。这一发现表明,gpr54a可能促进卵巢发育,而gpr54b可能抑制卵巢发育。在繁殖季节,ISH表明ACC的卵巢发育异常,并在ACC和RCC的大脑、垂体和卵巢的多个区域发现了gpr54a和gpr54b的信号。大脑、垂体和卵巢的这些区域与生殖调节相关的几种激素的分泌有关。因此,我们假设 ACC 中较低表达的 gpr54a 和较高表达的 gpr54b 可能通过调节生殖激素的分泌参与了不育症的发生。这项研究表明,gpr54a 和 gpr54b 在调节生殖方面的功能可能是相反的。总之,这些发现将有助于进一步研究 GPR54 的功能,并为研究 ACC 不育症提供理论依据。
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引用次数: 0
Identification of key genes affecting development and nutrient metabolism in the early seedling stage of Dongting catfish (Silurus asotus) 洞庭鲇幼苗期发育和营养代谢关键基因的鉴定
Pub Date : 2024-09-05 DOI: 10.1016/j.repbre.2024.08.003
Yanfang Wu , Jiaxin Fu , Jixiang Chu , Jun Yan , Jun Xiao , Can Yang , Rui Song , Hao Feng

As a carnivorous fish, the cannibalism are prone to happen in the early seedling stage in Dongting catfish (Silurus asotus), especailly when there is not enough food, which resulting in the low survival rate of Dongting catfish. To find clues to improve the survival rate of Dongting catfish offspring, the comparative transcriptomics analysis were conducted between normal and malformed larval fish, as well as normal larval fish before and after first food intake. In normal and malformed larval fish groups, a total of 881 differential genes were identified, including 634 up-regulated genes and 247 down-regulated genes. From these genes related to growth hormone synthesis and secretion were screened out as SLA isoform X1, SOCS3, STAT1b, JUNB, respectively. In the group of larval fish before and after the first food intake, 4901 up-regulated genes and 3660 down-regulated genes were found, from which the differential genes related to protein digestion and absorption pathway and pancreatic secretion pathway were screened out as cathepsin D precursor, elastase 2 like precursor, elastase 2 precursor, LPL isoform X1, CTRB1 precursor, CTRL precursor, CPA precursor, FABP, SLC15A1, CEL tandem duplicate 2 precursor. The differential genes screened for association with amino acid metabolism were ASAOC precursor, PLD3, NDPKs, trehalase, UMP-CMP kinase, L-amino-acid oxidase, PLB1, FALDH isoform X2, PLA2 precursor, glucokinase. Meanwhile, nine differential genes were selected for qPCR verification. The results confirmed that the relative expression trends of these genes were consistent with those found in the transcriptome. These findings provide an important reference for developing strategies to enhance the survival rate of Dongting catfish at early seedling stage.

洞庭鲇是肉食性鱼类,在幼苗期,尤其是在食物不足的情况下,容易发生食人现象,导致洞庭鲇的成活率较低。为了找到提高洞庭鲶后代成活率的线索,研究人员对正常幼鱼和畸形幼鱼以及正常幼鱼在首次摄食前后的转录组学进行了比较分析。在正常幼鱼组和畸形幼鱼组中,共发现了 881 个差异基因,其中上调基因 634 个,下调基因 247 个。从中筛选出与生长激素合成和分泌相关的基因,分别为SLA同工酶X1、SOCS3、STAT1b和JUNB。在首次摄食前后的幼鱼组中,发现了 4901 个上调基因和 3660 个下调基因,从中筛选出与蛋白质消化吸收途径和胰腺分泌途径相关的差异基因,分别是 cathepsin D precursor、类弹性蛋白酶 2 前体、弹性蛋白酶 2 前体、LPL 同工型 X1、CTRB1 前体、CTRL 前体、CPA 前体、FABP、SLC15A1、CEL 串联重复 2 前体。筛选出的与氨基酸代谢相关的差异基因有:ASAOC前体、PLD3、NDPKs、trehalase、UMP-CMP激酶、L-氨基酸氧化酶、PLB1、FALDH同工酶X2、PLA2前体、葡萄糖激酶。同时,选择了 9 个差异基因进行 qPCR 验证。结果证实,这些基因的相对表达趋势与转录组中发现的趋势一致。这些发现为制定提高洞庭黄颡鱼幼苗期成活率的策略提供了重要参考。
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引用次数: 0
Genetic performance, heritability, and correlation of traits in new plant type of rice lines for highland ecosystem 高原生态系统水稻新品系的遗传表现、遗传率和性状相关性
Pub Date : 2024-08-29 DOI: 10.1016/j.repbre.2024.08.002
Yusuf Limbongan , Rinaldi Sjahril , Adewidar Marano Pata'dungan , Trisday Yiin Parari

Rice cultivation is crucial in providing global food needs, particularly in highland areas with distinct environmental conditions. Adapting promising rice lines suitable for highland ecosystems is essential to ensure sustainable rice production in such regions. This study assesses the agronomic performance, heritability, and correlation of traits in new promising rice lines adapted to highland ecosystems. The latest promising rice lines are designed with the unique environmental conditions of highland regions in mind. This research was conducted in Buntu Barana’ Village, Tikala Sub-district, with an elevation of 858.4 m above sea level. The study was carried out in rain-fed semi-irrigated paddy fields. The research was conducted from May 2023 to January 2024. The research methodology involves testing various agronomic traits for yield production components of the new type of promising rice lines at different highland locations. The research procedures included the selection of viable seed strains, seeding, fertilization, balanced irrigation, control of plant pest organisms, harvesting, and post-harvesting. Evaluated agronomic traits encompass plant height, days to maturity, number of productive tillers, length of panicles, number of filled grains per panicle, and grain yield. Additionally, heritability analysis is performed to assess the extent to which observed trait variations are attributed to genetic factors. Research findings reveal significant variations in agronomic traits among the new type of promising rice lines. The highest grain yield is achieved in genotype UKIT102-2-056, which is 8.3 tons per hectare of paddy rice. These lines exhibit objective adaptation to the highland ecosystem, with some lines demonstrating superior performance in specific parameters, especially early maturity, namely 97 days after planting. Heritability analysis indicates that certain traits have high heritability levels, suggesting a significant role of genetic factors in controlling these traits. Furthermore, this study unveils correlation patterns among the observed agronomic traits. Significant positive and negative correlations among several traits indicate complex interrelationships among these agronomic characteristics. These findings offer further insights into the relationships between these traits and can be utilized to develop more adaptive rice lines in highland environments.

水稻种植对满足全球粮食需求至关重要,尤其是在环境条件独特的高原地区。改造适合高原生态系统的有前途的水稻品系对确保这些地区的可持续水稻生产至关重要。本研究评估了适应高原生态系统的有潜力水稻新品系的农艺表现、遗传率和性状相关性。最新的水稻品系在设计时考虑到了高原地区独特的环境条件。这项研究在海拔 858.4 米的提卡拉分区 Buntu Barana'村进行。研究在雨水灌溉的半灌溉稻田中进行。研究时间为 2023 年 5 月至 2024 年 1 月。研究方法包括在不同的高原地区测试新型水稻品系的各种农艺性状,以确定其产量。研究程序包括选择可行的种子品系、播种、施肥、平衡灌溉、控制植物病虫害、收割和收割后处理。评估的农艺性状包括株高、成熟天数、高产分蘖数、圆锥花序长度、每圆锥花序灌浆粒数和谷物产量。此外,还进行了遗传率分析,以评估观察到的性状变化在多大程度上归因于遗传因素。研究结果表明,新型水稻品系的农艺性状差异很大。产量最高的是基因型 UKIT102-2-056,每公顷水稻产量为 8.3 吨。这些品系表现出对高原生态系统的客观适应性,其中一些品系在特定参数上表现优异,尤其是早熟性,即插秧后 97 天。遗传力分析表明,某些性状具有较高的遗传力水平,表明遗传因素在控制这些性状方面发挥了重要作用。此外,这项研究还揭示了所观察到的农艺性状之间的相关模式。多个性状之间存在显著的正相关和负相关,表明这些农艺性状之间存在复杂的相互关系。这些发现进一步揭示了这些性状之间的关系,可用于在高原环境中培育适应性更强的水稻品系。
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引用次数: 0
Multivariate analysis and image-based phenotyping of cayenne fruit traits in selection and diversity mapping of multiple F1 cross lines 在多个 F1 杂交品系的选择和多样性制图中对辣椒果实性状进行多变量分析和基于图像的表型分析
Pub Date : 2024-08-21 DOI: 10.1016/j.repbre.2024.08.001
Muhammad Fuad Anshori , Yunus Musa , Novaty Eny Dungga , Nuniek Widiayani , Arfina Sukmawati Arifin , A. Masniawati , Firmansyah , Muh Farid , Andi Dirpan , Andi Isti Sakinah , Nirwansyah Amier

The phenomenon of fluctuating chili prices can be resolved in stages, one of which is through multiple crosses. However, this cross requires precise methods in the evaluation and selection process, especially regarding fruit characteristics. Image-based phenotyping 4.0 approaches can increase the potential precision of such evaluation genotypes, especially when this approach is combined with multivariate analysis. Therefore, both methods are needed to evaluate and select these cayenne multiple crosses. This research aims to identify the effectiveness of multivariate analysis and image-based explanatory characteristics of fruit phenotypes and to select multiple crosses that can continue to the F2 generation. The research was designed with a randomized complete block design of ten F1 multiple cross-genotypes and four check varieties. Each genotype was repeated three times, so there were 42 experimental units. Based on the results, multivariate was considered adequate in determining image explanatory characters based on fruit phenotype and genotype mapping of the population diversity of multiple crosses of cayenne pepper. The characteristics of fruit height, fruit area, and fruit Intden are image-based explanatory characters that can map the completeness of cayenne pepper fruit between multiple crosses well. This indicates that image-based phenotyping and multivariate analysis can provide more detailed image information of the potential of cayenne fruit from multiple crosses than just based on fruit weight. Therefore, both approaches are recommended for analyzing cayenne paper fruit potential, especially for multiple crosses. In addition, three crosses (MC4, MC8, and MC9) are optimal for the next generation to be recommended and continued.

辣椒价格波动的现象可以分阶段解决,其中之一就是通过多次杂交。然而,这种杂交需要在评估和选择过程中采用精确的方法,特别是在果实特征方面。基于图像的表型 4.0 方法可以提高这种评估基因型的潜在精确度,尤其是当这种方法与多元分析相结合时。因此,需要这两种方法来评估和选择这些卡宴多重杂交品种。本研究旨在确定多变量分析和基于图像的果实表型解释特征的有效性,并选择可延续到 F2 代的多交种。研究采用随机完全区组设计,包括 10 个 F1 多交基因型和 4 个对照品种。每个基因型重复三次,因此共有 42 个实验单元。根据结果,多变量被认为足以确定基于果实表型的图像解释特征和辣椒多交群体多样性的基因型图谱。果实高度、果实面积和果实内径是基于图像的解释性特征,能很好地映射辣椒果实在多个杂交种之间的完整性。这表明,基于图像的表型分析和多元分析能提供比仅根据果实重量更详细的图像信息,说明多个杂交品种的辣椒果实的潜力。因此,建议用这两种方法来分析辣椒纸果实的潜力,尤其是多次杂交的果实。此外,三个杂交品种(MC4、MC8 和 MC9)是推荐和继续进行下一代杂交的最佳选择。
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引用次数: 0
Population genetic characteristics of two crucian carp varieties derived from distant hybridization 两个鲫鱼远缘杂交品种的种群遗传特征
Pub Date : 2024-08-07 DOI: 10.1016/j.repbre.2024.07.002
Wenjie Luo , Xuexue Huang , Xiaowei Xu , Chenghua Dai , Qiong Liu , Yating Zhu , Duansheng Wu , Shi Wang , Qingfeng Liu , Conghui Yang

The Hefang crucian carp (HFJ) derived from Carassius cuvieri (♀) × C. auratus red var. (♂) and the crucian carp-like homodiploid fish (NCRC) derived from Cyprinus carpio (♀) × Megalobrama amblycephala (♂) are important germplasm resources of crucian carp. To investigate the population characteristics and reveal the current genetic situations of these hybrid varieties, we sequenced one nuclear molecular marker transferrin (Tf) among six Carassius populations, which included two hybrid varieties (HFJ and NCRC), one laboratory variety (red crucian carp, RCC) and three wild populations. A total of 166 distinct Tf alleles (A1∼A166) were identified, with sequence lengths ranging from 1145 bp to 1244 bp. Unexpectedly, the nucleotide diversity of Tf alleles in cultured populations (HFJ, NCRC, and RCC) exceeded that of wild populations. The phylogenetic reconstruction analysis results showed that HFJ and C. cuvieri were closely related, but they could not be separated from C. auratus. Besides, while most Tf alleles of NCRC and other Carassius populations were intermixed in five clades, two Tf alleles, together with Cy. carpio, formed a distinct monophyletic clade. Moreover, network and genetic structure analyses failed to distinguish between wild and cultured populations. Although AMOVA analysis based on Tf alleles indicated genetic differentiation among all six populations, the majority of the genetic variation (92.00 %) was observed within populations. Furthermore, the population dynamics analysis suggested that these populations have maintained relative stability in recent history. Therefore, the elevated nucleotide diversity of Tf alleles in cultured populations, the ambiguous population structure, and the limited genetic divergence among the six Carassius populations highlighted the hybrid genetic characteristics of HFJ and NCRC. These findings, based on Tf alleles, differ from the results obtained using mitochondrial gene markers, providing an alternative perspective for germplasm evaluation of hybrid varieties and crucian carp breeding.

由鲫鱼(♀)×鲫鱼红变种(♂)衍生的鹤坊鲫(HFJ)和由鲤鱼(♀)×鲫鱼红变种(♂)衍生的类鲫同源二倍体鱼(NCRC)是鲫鱼的重要种质资源。为了研究这些杂交品种的种群特征并揭示其遗传现状,我们对6个鲫鱼种群中的一个核分子标记转铁蛋白(Tf)进行了测序,其中包括2个杂交品种(HFJ和NCRC)、1个实验室品种(红鲫,RCC)和3个野生种群。共鉴定出 166 个不同的 Tf 等位基因(A1∼A166),序列长度从 1145 bp 到 1244 bp 不等。出乎意料的是,培养种群(HFJ、NCRC 和 RCC)中 Tf 等位基因的核苷酸多样性超过了野生种群。系统进化重建分析结果表明,HFJ与C. cuvieri亲缘关系密切,但不能从C. auratus中分离出来。此外,NCRC和其他鲫鱼种群的大多数Tf等位基因混杂在五个支系中,但有两个Tf等位基因与鲤鱼一起形成了一个独特的单系支系。此外,网络和遗传结构分析未能区分野生种群和养殖种群。虽然基于 Tf 等位基因的 AMOVA 分析表明所有六个种群之间存在遗传分化,但大多数遗传变异(92.00 %)都是在种群内部观察到的。此外,种群动态分析表明,这些种群在最近的历史中保持了相对稳定。因此,养殖种群中 Tf 等位基因核苷酸多样性的升高、种群结构的模糊性以及六个鲫鱼种群之间有限的遗传差异突出了 HFJ 和 NCRC 的杂交遗传特征。这些基于Tf等位基因的研究结果不同于线粒体基因标记的结果,为杂交品种的种质评价和鲫鱼育种提供了另一种视角。
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引用次数: 0
Supplemental effect of wild strawberry (Fragaria vesca) pulp extract in extender to enhance quality attributes of cryopreserved bovine sperms 在扩展剂中添加野草莓(Fragaria vesca)果肉提取物对提高冷冻保存牛精子质量属性的补充作用
Pub Date : 2024-07-13 DOI: 10.1016/j.repbre.2024.06.004
Khawaja Raees Ahmad , Sadia Suleman , Fiza Malik , Muhammad Ali Kanwal , Syeda Nadia Ahmad , Sidra Yasmeen , Iram Inayat , Asma Younis , Kausar Raees

The use of herbal bio-actives and phyto-contents to increase livestock productivity is a revived interest in veterinary research. The effect of wild strawberry {Fragaria vesca (FV)} pulp extract (PE) as antioxidant supplement in bovine semen cryopreservation diluent was explored. The experiment involved three fertile bulls. Three semen ejaculates per animal were collected. Each sample was diluted with Semen Transportation Diluent (STD) in 1:2 ratio. The (semen + STD) sample was vortexed and centrifuged (at 32g for 15 min) to remove 50 % supernatant. The remaining sample was re-diluted with semen cryopreservation diluent (SCD) in the ratio 1:4. Three aliquots of 0.3 ml were set aside from each (semen + STD + SCD) sample and were further treated with; 1: 0.7 mL of SCD (SCD group); 2: 0.7 mL SCD and 0.8 % FV-PE (FV-PE 0.8) and; 3: 0.7 mL SCD and 1.6 % FV-PE (FV-PE 1.6). Sperm quality parameters were evaluated before and after 48 h of cryopreservation. Results showed significantly enhanced mean percentage of sperm viability, progressive motility, velocity and fertilizability in FV-PE 0.8 and FV-PE 1.6 groups as compared with SCD group. The findings propose the protective and ameliorative potential of FV-PE for cryopreserved bovine sperms.

利用草本生物活性物质和植物成分提高牲畜生产率是兽医研究领域的一个新热点。本研究探讨了野生草莓{Fragaria vesca (FV)} 果肉提取物(PE)作为牛精液冷冻稀释液中抗氧化剂补充剂的效果。实验涉及三头能育公牛。每头公牛采集三次精液。每个样本都按 1:2 的比例用精液运输稀释液(STD)稀释。将(精液 + STD)样本涡旋离心(32 克离心 15 分钟),去除 50% 的上清液。剩余样品用精液冷冻稀释液(SCD)按 1:4 的比例重新稀释。从每个(精液 + STD + SCD)样本中留出三份 0.3 毫升的等分试样,分别用:1:0.7 毫升 SCD(SCD 组);2:0.7 毫升 SCD 和 0.8 % FV-PE(FV-PE 0.8);3:0.7 毫升 SCD 和 1.6 % FV-PE(FV-PE 1.6)进一步处理。在冷冻保存 48 小时前后对精子质量参数进行了评估。结果显示,与 SCD 组相比,FV-PE 0.8 和 FV-PE 1.6 组的精子存活率、活动力、速度和受精率的平均百分比均有明显提高。研究结果表明,FV-PE 对冷冻保存的牛精子具有保护和改善作用。
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Reproduction and breeding
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