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A Redox-Shifted Fibroblast Subpopulation Emerges in the Fibrotic Lung. 纤维化肺部出现氧化还原转移的成纤维细胞亚群
IF 5.9 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-07-03 DOI: 10.1165/rcmb.2023-0346OC
Patrick A Link, Jeffrey A Meridew, Nunzia Caporarello, Ashley Y Gao, Victor Peters, Mauricio Rojas, Daniel J Tschumperlin

Idiopathic pulmonary fibrosis (IPF) is an aggressive and thus far incurable disease, characterized by aberrant fibroblast-mediated extracellular matrix deposition. Our understanding of the disease etiology is incomplete; however, there is consensus that a reduction-oxidation (redox) imbalance plays a role. In this study we use the autofluorescent properties of two redox molecules, NAD(P)H and FAD, to quantify changes in their relative abundance in living lung tissue of mice with experimental lung fibrosis, and in freshly isolated cells from mouse lungs and humans with IPF. Our results identify cell population-specific intracellular redox changes in the lungs in experimental and human fibrosis. We focus particularly on redox changes within collagen producing cells, where we identified a bimodal distribution of NAD(P)H concentrations, establishing NAD(P)Hhigh and NAD(P)Hlow sub-populations. NAD(P)Hhigh fibroblasts exhibited elevated pro-fibrotic gene expression and decreased collagenolytic protease activity relative to NAD(P)Hlow fibroblasts. The NAD(P)Hhigh population was present in healthy lungs but expanded with time after bleomycin injury suggesting a potential role in fibrosis progression. We identified a similar increased abundance of NAD(P)Hhigh cells in freshly dissociated lungs of subjects with IPF relative to controls, and similar reductions in collagenolytic activity in this cell population. These data highlight the complexity of redox state changes in experimental and human pulmonary fibrosis and the need for selective approaches to restore redox imbalances in the fibrotic lung.

特发性肺纤维化(IPF)是一种侵袭性疾病,迄今无法治愈,其特点是成纤维细胞介导的细胞外基质异常沉积。我们对该病病因的了解尚不全面,但已达成共识的是,还原-氧化(氧化还原)失衡在其中发挥了作用。在这项研究中,我们利用 NAD(P)H 和 FAD 这两种氧化还原分子的自发荧光特性,量化了它们在实验性肺纤维化小鼠活体肺组织中的相对丰度变化,以及在小鼠肺和 IPF 患者新鲜分离细胞中的相对丰度变化。我们的研究结果确定了实验性肺纤维化和人类肺纤维化中细胞群特异性的细胞内氧化还原变化。我们特别关注胶原生成细胞内的氧化还原变化,在这些细胞中,我们发现了 NAD(P)H 浓度的双峰分布,建立了 NAD(P)H 高和 NAD(P)H 低的亚群。与 NAD(P)Hlow 成纤维细胞相比,NAD(P)Hhigh 成纤维细胞的促纤维化基因表达升高,胶原溶解蛋白酶活性降低。NAD(P)Hhigh 群体存在于健康肺中,但随着博莱霉素损伤时间的延长而扩大,这表明其在纤维化进展中可能发挥作用。我们发现,与对照组相比,IPF 患者新鲜离体肺中的 NAD(P)Hhigh 细胞丰度也有类似的增加,而且该细胞群的胶原溶解活性也有类似的降低。这些数据突显了实验和人类肺纤维化中氧化还原状态变化的复杂性,以及采用选择性方法恢复纤维化肺部氧化还原失衡的必要性。
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引用次数: 0
A Rapid Human Lung Tissue Dissociation Protocol Maximizing Cell Yield and Minimizing Cellular Stress. 使细胞产量最大化、细胞压力最小化的快速人体肺组织解离方案
IF 5.9 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-07-03 DOI: 10.1165/rcmb.2023-0343MA
Allen Duong, Aaron Wong, Rayoun Ramendra, David Sebben, Sajad Moshkelgosha, Sonya MacParland, Mingyao Liu, Stephen Juvet, Tereza Martinu

The human lung is a complex organ comprised of diverse populations of epithelial, mesenchymal, vascular and immune cells, which gains even greater complexity during disease states. To effectively study the lung at a single cell level, a dissociation protocol that achieves the highest yield of viable cells of interest with minimal dissociation-associated protein or transcription changes key. Here, we detail a rapid collagenase-based dissociation protocol (Col-Short), which provides a high-yield single cell suspension suitable for a variety of downstream applications. Diseased human lung explants were obtained and dissociated through the Col-Short protocol and compared to four other dissociation protocols. Resulting single cell suspensions were then assessed with flow cytometry, differential staining, and quantitative real-time PCR to identify major hematopoietic and non-hematopoietic cell populations, as well as their activation states. We observed that the Col-Short protocol provides the greatest number of cells per gram of lung tissue with no reduction in viability when compared to previously described dissociation protocols. Col-Short had no observable surface protein marker cleavage as well as lower expression of protein activation markers and stress-related transcripts compared to four other protocols. The Col-Short dissociation protocol can be used as a rapid strategy to generate single cells for respiratory cell biology research.

人类肺部是一个复杂的器官,由上皮细胞、间充质细胞、血管细胞和免疫细胞等不同细胞群组成,在疾病状态下会变得更加复杂。要在单细胞水平上有效地研究肺部,关键是要有一种解离方案,它能以最小的解离相关蛋白或转录变化获得最高产量的存活细胞。在这里,我们详细介绍了一种基于胶原酶的快速解离方案(Col-Short),它能提供适合各种下游应用的高产单细胞悬液。我们通过 Col-Short 方案获得并解离了患病的人肺外植体,并与其他四种解离方案进行了比较。然后用流式细胞术、差异染色法和定量实时 PCR 评估得到的单细胞悬液,以确定主要的造血和非造血细胞群及其活化状态。我们观察到,与之前描述的解离方案相比,Col-Short 方案每克肺组织中的细胞数量最多,而且存活率没有降低。与其他四种方案相比,Col-Short 没有观察到表面蛋白标记物的裂解,蛋白活化标记物和应激相关转录本的表达量也较低。Col-Short解离方案可作为一种快速生成单细胞的策略,用于呼吸细胞生物学研究。
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引用次数: 0
Extracellular Vesicle ASC: A Novel Mediator for Lung-Brain Axis in Preterm Brain Injury. 细胞外囊泡 ASC:早产儿脑损伤中肺脑轴的新型介质
IF 5.9 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-07-03 DOI: 10.1165/rcmb.2023-0402OC
Natalie Starke, Naga Venkata Divya Challa, Huijun Yuan, Shaoyi Chen, Matthew R Duncan, Erika Dlrm Cabrera Ranaldi, Juan Pablo de Rivero Vaccari, Alini Schott, Ana Cecilia Aguilar, Yee-Shun Lee, Aisha Khan, Jo Duara, April Tan, Merline Benny, Augusto F Schmidt, Karen Young, Eduardo Bancalari, Nelson Claure, Shu Wu

Bronchopulmonary dysplasia (BPD) and neurodevelopmental impairment (NDI) are among the most common morbidities affecting preterm infants. Although BPD is a predictor of poor NDI, it is currently uncertain how BPD contributes to brain injury in preterm infants. Extracellular vesicles (EVs) are involved in inter-organ communication in diverse pathological processes. Apoptosis-associated speck-like protein containing a caspase recruitment domain (ASC) is pivotal in inflammasome assembly and activation of inflammatory response. We assessed expression profiles of alveolar macrophage (AM) markers, CD11b, CD11c, and CD206, and ASC in EVs isolated from the plasma of preterm infants at risk for BPD at 1 week of age. We found that infants on higher fraction inspired oxygen (FiO2) therapy (HO2, ≥30%) had increased levels of AM-derived EV-ASC compared with infants on lower FiO2 (LO2, <30%). To assess the function of these EVs, we performed adoptive transfer experiments by injecting them into the circulation of newborn mice. We discovered that mice that received EVs from infants on HO2 had increased lung inflammation, decreased alveolarization, and disrupted vascular development, the hallmarks of BPD. Importantly, these EVs crossed the blood-brain barrier and the EVs from infants on HO2 caused inflammation, reduced cell survival, and increased cell death with features of pyroptosis and necroptosis in the hippocampus. These results highlight a novel role for AM-derived EV-ASC in mediating the lung-to-brain crosstalk that is critical in the pathogenesis of BPD and brain injury and identify potential novel targets for preventing and treating BPD and brain injury in preterm infants.

支气管肺发育不良(BPD)和神经发育障碍(NDI)是早产儿最常见的疾病之一。虽然早产儿支气管肺发育不良是早产儿神经发育不良的一个预测因素,但目前还不确定早产儿支气管肺发育不良是如何导致早产儿脑损伤的。细胞外囊泡(EVs)在多种病理过程中参与器官间的交流。含有卡巴酶招募结构域的凋亡相关斑点样蛋白(ASC)在炎性小体的组装和炎症反应的激活中起着关键作用。我们评估了肺泡巨噬细胞(AM)标志物 CD11b、CD11c 和 CD206 以及 ASC 在从 1 周龄时有 BPD 风险的早产儿血浆中分离出的 EVs 中的表达谱。我们发现,接受高浓度氧气(HO2,≥30%)治疗的婴儿与接受低浓度氧气(LO2,≥30%)治疗的婴儿相比,AM衍生的EV-ASC水平更高,而接受低浓度氧气(LO2,≥30%)治疗的婴儿肺部炎症加重、肺泡化降低、血管发育紊乱,这些都是BPD的特征。重要的是,这些 EVs 穿过了血脑屏障,而吸入 HO2 的婴儿的 EVs 会导致炎症、细胞存活率降低、细胞死亡增加,并在海马中表现出脓毒症和坏死的特征。这些结果凸显了AM衍生的EV-ASC在介导肺-脑串联中的新作用,而肺-脑串联在BPD和脑损伤的发病机制中至关重要,这些结果还确定了预防和治疗早产儿BPD和脑损伤的潜在新靶点。
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引用次数: 0
Application of Metabolomics across the Spectrum of Pulmonary and Critical Care Medicine. 代谢组学在肺部和重症监护医学领域的应用。
IF 5.9 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-07-01 DOI: 10.1165/rcmb.2024-0080PS
Catherine E Simpson, Julie G Ledford, Gang Liu

In recent years, metabolomics, the systematic study of small-molecule metabolites in biological samples, has yielded fresh insights into the molecular determinants of pulmonary diseases and critical illness. The purpose of this article is to orient the reader to this emerging field by discussing the fundamental tenets underlying metabolomics research, the tools and techniques that serve as foundational methodologies, and the various statistical approaches to analysis of metabolomics datasets. We present several examples of metabolomics applied to pulmonary and critical care medicine to illustrate the potential of this avenue of research to deepen our understanding of pathophysiology. We conclude by reviewing recent advances in the field and future research directions that stand to further the goal of personalizing medicine to improve patient care.

近年来,代谢组学(对生物样本中的小分子代谢物进行系统研究)为肺部疾病和危重症的分子决定因素提供了新的见解。本文旨在通过讨论代谢组学研究的基本原理、作为基础方法的工具和技术以及分析代谢组学数据集的各种统计方法,引导读者了解这一新兴领域。我们介绍了几个将代谢组学应用于肺部和重症监护医学的实例,以说明这一研究途径在加深我们对病理生理学的理解方面所具有的潜力。最后,我们回顾了该领域的最新进展和未来的研究方向,这些研究方向将进一步实现个性化医疗的目标,从而改善患者护理。
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引用次数: 0
Proteomics Panel of BAL Fluid Associated with Ventilator-induced Lung Injury. 与呼吸机诱发的肺损伤有关的 BAL 液蛋白质组学分析小组
IF 5.9 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-07-01 DOI: 10.1165/rcmb.2023-0431LE
Ya Wen, Xiang Zhang, Nicola Cacciani, Yvette Hedström, Yuji Ikeno, Jonas Bergquist, Lars Larsson
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引用次数: 0
July Highlights/Papers by Junior Investigators/NIH News. 七月要闻/初级研究人员的论文/NIH 新闻。
IF 5.9 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-07-01 DOI: 10.1165/rcmb.71i1RedAlert
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引用次数: 0
Ventilator-induced Lung Injury Promotes Inflammation within the Pleural Cavity. 呼吸机诱发的肺损伤促进胸膜腔内的炎症
IF 5.9 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-07-01 DOI: 10.1165/rcmb.2023-0332OC
Rhianna F Baldi, Marissa W Koh, Chubicka Thomas, Tomasz Sabbat, Bincheng Wang, Stefania Tsatsari, Kieron Young, Alexander Wilson-Slomkowski, Sanooj Soni, Kieran P O'Dea, Brijesh V Patel, Masao Takata, Michael R Wilson

Mechanical ventilation contributes to the morbidity and mortality of patients in intensive care, likely through the exacerbation and dissemination of inflammation. Despite the proximity of the pleural cavity to the lungs and exposure to physical forces, little attention has been paid to its potential as an inflammatory source during ventilation. Here, we investigate the pleural cavity as a novel site of inflammation during ventilator-induced lung injury. Mice were subjected to low or high tidal volume ventilation strategies for up to 3 hours. Ventilation with a high tidal volume significantly increased cytokine and total protein levels in BAL and pleural lavage fluid. In contrast, acid aspiration, explored as an alternative model of injury, only promoted intraalveolar inflammation, with no effect on the pleural space. Resident pleural macrophages demonstrated enhanced activation after injurious ventilation, including upregulated ICAM-1 and IL-1β expression, and the release of extracellular vesicles. In vivo ventilation and in vitro stretch of pleural mesothelial cells promoted ATP secretion, whereas purinergic receptor inhibition substantially attenuated extracellular vesicles and cytokine levels in the pleural space. Finally, labeled protein rapidly translocated from the pleural cavity into the circulation during high tidal volume ventilation, to a significantly greater extent than that of protein translocation from the alveolar space. Overall, we conclude that injurious ventilation induces pleural cavity inflammation mediated through purinergic pathway signaling and likely enhances the dissemination of mediators into the vasculature. This previously unidentified consequence of mechanical ventilation potentially implicates the pleural space as a focus of research and novel avenue for intervention in critical care.

机械通气很可能通过炎症的加剧和传播导致重症监护患者的发病率和死亡率。尽管胸膜腔靠近肺部并暴露于物理力量之下,但很少有人关注胸膜腔在通气过程中作为炎症源的潜力。在此,我们研究了胸膜腔作为通气诱导的肺损伤过程中一个新的炎症部位。对小鼠进行长达 3 小时的低潮气量或高潮气量通气。高潮气量通气明显增加了支气管肺泡和胸腔灌洗液中的细胞因子和总蛋白水平。相比之下,酸吸入作为一种替代损伤模型,只促进了肺泡内炎症,对胸膜腔没有影响。损伤性通气后,胸膜巨噬细胞的活化能力增强,包括 ICAM-1 和白细胞介素-1β 的表达上调以及细胞外囊泡的释放。胸膜间皮细胞的体内通气和体外拉伸促进了 ATP 的分泌,而嘌呤能受体抑制则大大降低了胸膜腔内细胞外囊泡和细胞因子的水平。最后,在高潮气量通气过程中,标记蛋白质迅速从胸膜腔转移到血液循环中,其程度明显高于从肺泡空间转移的蛋白质。总之,我们得出结论:损伤性通气通过嘌呤能通路信号传导诱导胸膜腔炎症,并可能加强介质向血管的传播。机械通气造成的这一之前未被发现的后果可能会使胸膜腔成为重症监护的研究重点和新的干预途径。
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引用次数: 0
Single- versus Multiple-Beat Measurement of Right Ventricular Function in Rodents. 啮齿动物右心室功能的单次与多次测量
IF 5.9 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-07-01 DOI: 10.1165/rcmb.2023-0407LE
Baktybek Kojonazarov, Nils Kremer, Christina Pilz, Hossein Ardeschir Ghofrani, Norbert Weissmann, Robert Naeije, Werner Seeger, Ralph T Schermuly, Khodr Tello
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引用次数: 0
PD-L1 and PD-1 Are Associated with Clinical Outcomes and Alveolar Immune Cell Activation in ARDS. PD-L1 和 PD-1 与 ARDS 的临床结果和肺泡免疫细胞活化有关。
IF 5.9 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-07-01 DOI: 10.1165/rcmb.2024-0201OC
Eric D Morrell, Sarah E Holton, Alice Wiedeman, Susanna Kosamo, Mallorie A Mitchem, Victoria Dmyterko, Zoie Franklin, Ashley Garay, Ian B Stanaway, Ted Liu, Neha A Sathe, F Linzee Mabrey, Renee D Stapleton, Uma Malhotra, Cate Speake, Jessica A Hamerman, Sudhakar Pipavath, Laura Evans, Pavan K Bhatraju, S Alice Long, Mark M Wurfel, Carmen Mikacenic

The relationship between the Programmed Death-Ligand 1 (PD-L1)/Programmed Death-1 (PD-1) pathway, lung inflammation, and clinical outcomes in acute respiratory distress syndrome (ARDS) is poorly understood. We sought to determine whether PD-L1/PD-1 in the lung or blood is associated with ARDS and associated severity. We measured soluble PD-L1 (sPD-L1) in plasma and lower respiratory tract samples (ARDS1 (n = 59) and ARDS2 (n = 78)) or plasma samples alone (ARDS3 (n = 149)) collected from subjects with ARDS and tested for associations with mortality using multiple regression. We used mass cytometry to measure PD-L1/PD-1 expression and intracellular cytokine staining in cells isolated from bronchoalveolar lavage fluid (BALF) (n = 18) and blood (n = 16) from critically-ill subjects with or without ARDS enrolled from a fourth cohort. Higher plasma levels of sPD-L1 were associated with mortality in ARDS1, ARDS2, and ARDS3. In contrast, higher levels of sPD-L1 in the lung were either not associated with mortality (ARDS2) or were associated with survival (ARDS1). Alveolar PD-1POS T cells had more intracellular cytokine staining compared with PD-1NEG T cells. Subjects without ARDS had a higher ratio of PD-L1POS alveolar macrophages to PD-1POS T cells compared with subjects with ARDS. We conclude that sPD-L1 may have divergent cellular sources and/or functions in the alveolar vs. blood compartments given distinct associations with mortality. Alveolar leukocyte subsets defined by PD-L1/PD-1 cell-surface expression have distinct cytokine secretion profiles, and the relative proportions of these subsets are associated with ARDS.

人们对程序性死亡配体 1(PD-L1)/程序性死亡-1(PD-1)通路、肺部炎症和急性呼吸窘迫综合征(ARDS)临床结果之间的关系知之甚少。我们试图确定肺部或血液中的 PD-L1/PD-1 是否与 ARDS 及相关严重程度有关。我们测量了收集自 ARDS 受试者的血浆和下呼吸道样本(ARDS1(n = 59)和 ARDS2(n = 78))或单独血浆样本(ARDS3(n = 149))中的可溶性 PD-L1 (sPD-L1),并使用多元回归法检测了与死亡率的关系。我们使用质控细胞仪测量了从支气管肺泡灌洗液(BALF)(n = 18)和血液(n = 16)中分离出的细胞中的 PD-L1/PD-1 表达和细胞内细胞因子染色,这些细胞来自第四个队列中患有或不患有 ARDS 的重症患者。在 ARDS1、ARDS2 和 ARDS3 中,血浆中较高水平的 sPD-L1 与死亡率相关。相比之下,肺部较高水平的 sPD-L1 要么与死亡率无关(ARDS2),要么与存活率有关(ARDS1)。与 PD-1NEG T 细胞相比,肺泡 PD-1POS T 细胞细胞内细胞因子染色更多。与患有 ARDS 的受试者相比,无 ARDS 的受试者肺泡巨噬细胞与 PD-1POS T 细胞的比例更高。我们的结论是,sPD-L1 在肺泡与血液中可能有不同的细胞来源和/或功能,因为它们与死亡率有不同的关联。由 PD-L1/PD-1 细胞表面表达所定义的肺泡白细胞亚群具有不同的细胞因子分泌特征,这些亚群的相对比例与 ARDS 有关。
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引用次数: 0
Akt-driven TGF-β and DKK1 Secretion Impairs F508del Cystic Fibrosis Airway Epithelium Polarity. Akt 驱动的 TGF-β 和 DKK1 分泌会损害 F508del CF 气道上皮细胞的极性。
IF 5.9 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-07-01 DOI: 10.1165/rcmb.2023-0408OC
Tahir Idris, Michael Bachmann, Marc Bacchetta, Bernhard Wehrle-Haller, Marc Chanson, Mehdi Badaoui

Epithelial polarity is fundamental in maintaining barrier integrity and tissue protection. In cystic fibrosis (CF), apicobasal polarity of the airway epithelium is altered, resulting in increased apical fibronectin deposition and enhanced susceptibility to bacterial infections. Here, we evaluated the effect of highly effective modulator treatment (HEMT) on fibronectin apical deposition and investigated the intracellular mechanisms triggering the defect in polarity of the CF airway epithelium. To this end, primary cultures of CF (F508del variant) human airway epithelial cells (HAECs) and a HAEC line, Calu-3, knocked down for CFTR (CF transmembrane conductance regulator) were compared with control counterparts. We show that CFTR mutation in primary HAECs and CFTR knockdown cells promote the overexpression and oversecretion of TGF-β1 and DKK1 when cultured at an air-liquid interface. These dynamic changes result in hyperactivation of the TGF-β pathway and inhibition of the Wnt pathway through degradation of β-catenin leading to imbalanced proliferation and polarization. The abnormal interplay between TGF-β and Wnt signaling pathways is reinforced by aberrant Akt signaling. Pharmacological manipulation of TGF-β, Wnt, and Akt pathways restored polarization of the F508del CF epithelium, a correction that was not achieved by HEMT. Our data shed new insights into the signaling pathways that fine-tune apicobasal polarization in primary airway epithelial cells and may provide an explanation to the mitigated efficacy of HEMT on lung infection in people with CF.

上皮极性是维持屏障完整性和组织保护的基础。在囊性纤维化(CF)患者中,气道上皮细胞的根尖-基底极性发生了改变,导致纤维粘连蛋白根尖沉积增加,并增强了对细菌感染的易感性。在此,我们评估了高效调节剂处理(HEMT)对纤维粘连蛋白顶端沉积的影响,并研究了引发 CF 气道上皮极性缺陷的细胞内机制。为此,我们将原代培养的 CF(F508del 变异)人气道上皮细胞(HAECs)和在气液界面(ALI)上生长的 CFTR 基因敲除(KD)的 HAEC 株 Calu-3 与对照组进行了比较。我们发现,原代 HAEC 和 CFTR KD 细胞中的 CFTR 基因突变会促进 TGF-β1 和 DKK1 在 ALI 培养条件下的过表达和过分泌。这些动态变化导致 TGF-β 通路过度激活,并通过降解 β-catenin 抑制 Wnt 通路,从而导致增殖和极化失衡。TGF-β 和 Wnt 信号通路之间的异常相互作用因异常的 Akt 信号传导而得到加强。对 TGF-β、Wnt 和 Akt 信号通路的药理操作可恢复 F508del CF 上皮细胞的极化,而 HEMT 则无法实现这种纠正。我们的数据为微调原发性气道上皮细胞尖基底极化的信号通路提供了新的视角,并可能为HEMT对CF患者肺部感染的疗效减弱提供了解释。
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引用次数: 0
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American Journal of Respiratory Cell and Molecular Biology
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