Pub Date : 2022-11-21DOI: 10.1007/s10453-022-09771-6
Anamika Nath, Neeharika Baruah, Mebaaibok L. Nonglait, Pratibha Deka
Biological contaminants mainly consisting of living or dead microorganisms and compounds or fragments of plants and animal origin are gaining widespread research interest in recent years due to their ubiquitous presence along with their health effects on humans. Students spend a significant time of the day in educational institutions, which increases the cumulative health risk over the years. This review discusses the major biological contaminants, sampling strategies, health effects, and the factors affecting their prevalence in educational institutions. Fungi and bacteria were the most reported bio-contaminants followed by allergens and endotoxins. Exposure to bio-contaminants may result in acute and chronic respiratory diseases, infectious diseases, allergies, building-related illnesses, and even cancer. More research is needed to know the susceptibility of different age groups of students, formulation of guideline values, standard protocols for sampling, and proper diagnostic tests for diseases caused by bio-contaminants. Students should be made aware of the various aspects of indoor air quality such that they become inquisitive towards the same and become responsible for safety and hygiene.
{"title":"Biological contaminants in indoor environments of educational institutions","authors":"Anamika Nath, Neeharika Baruah, Mebaaibok L. Nonglait, Pratibha Deka","doi":"10.1007/s10453-022-09771-6","DOIUrl":"10.1007/s10453-022-09771-6","url":null,"abstract":"<div><p>Biological contaminants mainly consisting of living or dead microorganisms and compounds or fragments of plants and animal origin are gaining widespread research interest in recent years due to their ubiquitous presence along with their health effects on humans. Students spend a significant time of the day in educational institutions, which increases the cumulative health risk over the years. This review discusses the major biological contaminants, sampling strategies, health effects, and the factors affecting their prevalence in educational institutions. Fungi and bacteria were the most reported bio-contaminants followed by allergens and endotoxins. Exposure to bio-contaminants may result in acute and chronic respiratory diseases, infectious diseases, allergies, building-related illnesses, and even cancer. More research is needed to know the susceptibility of different age groups of students, formulation of guideline values, standard protocols for sampling, and proper diagnostic tests for diseases caused by bio-contaminants. Students should be made aware of the various aspects of indoor air quality such that they become inquisitive towards the same and become responsible for safety and hygiene.</p></div>","PeriodicalId":7718,"journal":{"name":"Aerobiologia","volume":"39 1","pages":"1 - 20"},"PeriodicalIF":2.0,"publicationDate":"2022-11-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://link.springer.com/content/pdf/10.1007/s10453-022-09771-6.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"47500278","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2022-11-10DOI: 10.1007/s10453-022-09770-7
Lenka Hájková, Martin Možný, Lenka Bartošová, Petra Dížková, Zdeněk Žalud
Timely information on the beginning of the flowering of important plant species of pollen allergens is consequential for the entire population due to pollen allergy and its extensive clinical impact worldwide. This paper examines the prediction of the beginning of the flowering of the common hazel (Corylus avellana) based on the PhenoClim phenological model using long-term phenological observations (1991–2020) in the Czech Republic. Furthermore, temporal and spatial evaluations of the beginning of the flowering of C. avellana were examined in different climate zones in the Czech Republic within the same period. In total, 40 phenological stations at altitudes from 155 to 743 m asl located in warm, medium warm, and cold climate zones were evaluated using the Mann–Kendall test. The beginning of the flowering of C. avellana changed progressively in timing, and the difference in the rate of shifts was between −33 and + 15 days per the entire period. An extreme shift to an earlier date was detected at stations located in a warm region (W2). In contrast, the highest shift to a later date was found at stations located in the cold climate regions (C4, C6, C7). Using the PhenoClim, the base temperature and temperature sums were calculated for the beginning of the flowering of the common hazel. As the most accurate predictor for this phenological phase and species, the maximum air temperature was determined as the best predictor based on the combination of RMSE and R2 values. The optimal start day for calculation was January 1st; the threshold (base temperature) was 2.7 °C with a temperature sum of 155.7 °C. The RMSE value was 5.46, and the MBE value was −0.93. The simulated data showed an excellent correlation with the observed data—the correlation coefficient was 0.932. The PhenoClim model results can be used in the forecast modelling of the beginning of the flowering of the common hazel in the Czech Republic.
{"title":"A prediction of the beginning of the flowering of the common hazel in the Czech Republic","authors":"Lenka Hájková, Martin Možný, Lenka Bartošová, Petra Dížková, Zdeněk Žalud","doi":"10.1007/s10453-022-09770-7","DOIUrl":"10.1007/s10453-022-09770-7","url":null,"abstract":"<div><p>Timely information on the beginning of the flowering of important plant species of pollen allergens is consequential for the entire population due to pollen allergy and its extensive clinical impact worldwide. This paper examines the prediction of the beginning of the flowering of the common hazel <i>(Corylus avellana)</i> based on the PhenoClim phenological model using long-term phenological observations (1991–2020) in the Czech Republic. Furthermore, temporal and spatial evaluations of the beginning of the flowering of <i>C. avellana</i> were examined in different climate zones in the Czech Republic within the same period. In total, 40 phenological stations at altitudes from 155 to 743 m asl located in warm, medium warm, and cold climate zones were evaluated using the Mann–Kendall test. The beginning of the flowering of <i>C. avellana</i> changed progressively in timing, and the difference in the rate of shifts was between −33 and + 15 days per the entire period. An extreme shift to an earlier date was detected at stations located in a warm region (W2). In contrast, the highest shift to a later date was found at stations located in the cold climate regions (C4, C6, C7). Using the PhenoClim, the base temperature and temperature sums were calculated for the beginning of the flowering of the common hazel. As the most accurate predictor for this phenological phase and species, the maximum air temperature was determined as the best predictor based on the combination of RMSE and <i>R</i><sup>2</sup> values. The optimal start day for calculation was January 1st; the threshold (base temperature) was 2.7 °C with a temperature sum of 155.7 °C. The RMSE value was 5.46, and the MBE value was −0.93. The simulated data showed an excellent correlation with the observed data—the correlation coefficient was 0.932. The PhenoClim model results can be used in the forecast modelling of the beginning of the flowering of the common hazel in the Czech Republic.</p></div>","PeriodicalId":7718,"journal":{"name":"Aerobiologia","volume":"39 1","pages":"21 - 35"},"PeriodicalIF":2.0,"publicationDate":"2022-11-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"49035333","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2022-11-08DOI: 10.1007/s10453-022-09758-3
Aseel Mahdi Shaikh Ali, Peter Rooney, Julie A. Hawkins
Many methods have been devised to count pollen grains automatically; however, few combine speed, reliability, inexpensiveness and user friendliness. This study describes a combination of simple, glycerine-based extraction, digital imaging and free particle counting software configured to achieve semi-automated processing of a large volume of images. Pollen grains were extracted from anthers of 10 common perennial grass (Poaceae) species, all implicated in pollinosis in Europe, and samples, illuminated on slides and digitally imaged. ImageJ algorithms were designed to remove significant extraneous content and count just the pollen grains, then applied in batch mode on multiple images. Accuracy was assessed by comparing a sample of automated software counts to manual, visual counts of the same images and found to be high. Total pollen production per anther and per inflorescence was estimated by counting the number of pollen grains per anther and the number of florets per inflorescence. Methodological and natural variation in pollen counts is discussed. Results were compared to published pollen counts of the same species; new pollen production figures are published for Cynosurus cristatus. This method is portable to other plant species, and requires only readily available reagents, equipment and software, it is quick, reliable, inexpensive and user friendly.
{"title":"Automatically counting pollen and measuring pollen production in some common grasses","authors":"Aseel Mahdi Shaikh Ali, Peter Rooney, Julie A. Hawkins","doi":"10.1007/s10453-022-09758-3","DOIUrl":"10.1007/s10453-022-09758-3","url":null,"abstract":"<div><p>Many methods have been devised to count pollen grains automatically; however, few combine speed, reliability, inexpensiveness and user friendliness. This study describes a combination of simple, glycerine-based extraction, digital imaging and free particle counting software configured to achieve semi-automated processing of a large volume of images. Pollen grains were extracted from anthers of 10 common perennial grass (Poaceae) species, all implicated in pollinosis in Europe, and samples, illuminated on slides and digitally imaged. ImageJ algorithms were designed to remove significant extraneous content and count just the pollen grains, then applied in batch mode on multiple images. Accuracy was assessed by comparing a sample of automated software counts to manual, visual counts of the same images and found to be high. Total pollen production per anther and per inflorescence was estimated by counting the number of pollen grains per anther and the number of florets per inflorescence. Methodological and natural variation in pollen counts is discussed. Results were compared to published pollen counts of the same species; new pollen production figures are published for <i>Cynosurus cristatus</i>. This method is portable to other plant species, and requires only readily available reagents, equipment and software, it is quick, reliable, inexpensive and user friendly.</p></div>","PeriodicalId":7718,"journal":{"name":"Aerobiologia","volume":"38 4","pages":"433 - 455"},"PeriodicalIF":2.0,"publicationDate":"2022-11-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://link.springer.com/content/pdf/10.1007/s10453-022-09758-3.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"42974769","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2022-11-07DOI: 10.1007/s10453-022-09768-1
Alberto Vitali, Alberto Marco Del Pino, Luca Regni, Eva Costanzi, Elisabetta Bravi, Ombretta Marconi, Primo Proietti, Carlo Alberto Palmerini
Inhalation of olive pollen (Olea europaea L.) is one of the main causes of allergy in Mediterranean countries and some areas of North America. The response to allergens consists in the production of inflammatory cytokines which is mediated by the deregulation of Ca2+ signals. In this study, the biological activity of the material released in olive pollen hydration (PMR) was tested on Ca2+ cytosolic of PE/CA-PJ15 cells (PJ-15). Ca2+ cytosolic was determined by fluorometric assay with the cell line PE/CA-PJ15 (PJ-15) labeled with the fluorescent probe FURA 2 AM. The material released in olive pollen hydration (PMR) was analyzed by HPLC for the determination of phenolic acids. PMR was subjected to fractionation by gel filtration, and the fractions with Ca2+-chelating activity were tested with SDS-PAGE and the single bands characterized by proteomic analysis. PMR showed high Ca2+-chelating activity and is able of blocking the increase Ca2+-cytosolic produced by thapsigargin (TG). PMR then restored Ca2+ homeostasis in PJ-15 cells deregulated by the endoplasmic reticulum Ca2+-ATPases inhibitor. It is therefore possible that PMR can antagonize the effects of allergens on Ca2+ cytosolic. The analytical characterization of the material released by the pollen highlighted in the pollen allergen Ole e 3 and in the p-coumaric acid the possible culprits of the Ca2+-antagonist activity of PMR. Furthermore, the sequence of Ole e 3 could provide information for the possible construction of a synthetic peptide to be used in an allergy-targeted Ca2+-antagonist therapy.
吸入橄榄花粉(Olea europaea L.)是地中海国家和北美一些地区过敏的主要原因之一。对过敏原的反应包括炎性细胞因子的产生,这是由Ca2+信号的失调介导的。本研究在PE/CA-PJ15细胞(PJ-15)的Ca2+胞浆上测试了橄榄花粉水合(PMR)释放物质的生物活性。用荧光探针FURA2AM标记的PE/CA-PJ15(PJ-15)细胞,用荧光法测定细胞内Ca2+含量。用高效液相色谱法测定橄榄花粉水合过程中释放的物质酚酸。通过凝胶过滤对PMR进行分级,并用SDS-PAGE和蛋白质组学分析对具有Ca2+螯合活性的组分进行测试。PMR具有较高的Ca2+螯合活性,并能阻断茶毒碱(TG)引起的胞浆Ca2+的增加。PMR随后恢复PJ-15细胞中被内质网Ca2+-ATP酶抑制剂解除调节的Ca2+稳态。因此,PMR可能拮抗过敏原对Ca2+胞质的影响。花粉释放物质的分析特征突出了花粉过敏原Ole e 3和对香豆酸中PMR Ca2+拮抗剂活性的可能罪魁祸首。此外,Ole e 3的序列可以为可能构建用于过敏靶向Ca2+拮抗剂治疗的合成肽提供信息。
{"title":"The calcium-antagonist activity of the material released by olive pollen (PMR), tested on Ca2+-cytosolic of PE/CA-PJ15 cells","authors":"Alberto Vitali, Alberto Marco Del Pino, Luca Regni, Eva Costanzi, Elisabetta Bravi, Ombretta Marconi, Primo Proietti, Carlo Alberto Palmerini","doi":"10.1007/s10453-022-09768-1","DOIUrl":"10.1007/s10453-022-09768-1","url":null,"abstract":"<div><p>Inhalation of olive pollen (<i>Olea europaea</i> L.) is one of the main causes of allergy in Mediterranean countries and some areas of North America. The response to allergens consists in the production of inflammatory cytokines which is mediated by the deregulation of Ca<sup>2+</sup> signals. In this study, the biological activity of the material released in olive pollen hydration (PMR) was tested on Ca<sup>2+</sup> cytosolic of PE/CA-PJ15 cells (PJ-15). Ca<sup>2+</sup> cytosolic was determined by fluorometric assay with the cell line PE/CA-PJ15 (PJ-15) labeled with the fluorescent probe FURA 2 AM. The material released in olive pollen hydration (PMR) was analyzed by HPLC for the determination of phenolic acids. PMR was subjected to fractionation by gel filtration, and the fractions with Ca<sup>2+</sup>-chelating activity were tested with SDS-PAGE and the single bands characterized by proteomic analysis. PMR showed high Ca<sup>2+</sup>-chelating activity and is able of blocking the increase Ca<sup>2+</sup>-cytosolic produced by thapsigargin (TG). PMR then restored Ca<sup>2+</sup> homeostasis in PJ-15 cells deregulated by the endoplasmic reticulum Ca<sup>2+</sup>-ATPases inhibitor. It is therefore possible that PMR can antagonize the effects of allergens on Ca<sup>2+</sup> cytosolic. The analytical characterization of the material released by the pollen highlighted in the pollen allergen Ole e 3 and in the p-coumaric acid the possible culprits of the Ca<sup>2+</sup>-antagonist activity of PMR. Furthermore, the sequence of Ole e 3 could provide information for the possible construction of a synthetic peptide to be used in an allergy-targeted Ca<sup>2+</sup>-antagonist therapy.</p></div>","PeriodicalId":7718,"journal":{"name":"Aerobiologia","volume":"38 4","pages":"581 - 589"},"PeriodicalIF":2.0,"publicationDate":"2022-11-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://link.springer.com/content/pdf/10.1007/s10453-022-09768-1.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"47873790","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2022-11-04DOI: 10.1007/s10453-022-09762-7
Fátima Aguilera, Luis Ruiz, Elena Montejo
The aim of this study was to identify and quantify the airborne fungal spore content in the Cathedral of Jaén (South Spain). The evaluation of the microclimatic conditions and their relationship with the presence of airborne fungal spores in different indoor areas was also tested. Airborne fungal spores were recorded during 2019 by using a volumetric sampler. The Choir was the study area with the maximum airborne fungal spore concentrations, representing 55% of the total compared to the minimum representation of 12% sampled in the Museum. Regarding the seasonality, winter records represented only 20% of the total the airborne spore monitoring. Peaks in the daily spore concentrations were mainly recorded in the first half of spring and during the middle of the summer. A total of 29 taxa were identified. Cladosporium and Aspergillus/Penicillium were the potentially biodeteriogen fungal spores that were more frequently recorded in all of the study areas. Of the total airborne fungal spores recorded in the indoor environment, 82.5% belong to biodeteriogen fungi that, under suitable conditions for their germination, could have a negative effect on the preservation of artistic-historical heritage. The installation and correct maintenance of air-conditioning systems and the aeromycological analysis in suspected places would be recommended.
{"title":"Analysis of airborne fungal spore content in different indoor microenvironments in the Cathedral of Jaén (South Spain)","authors":"Fátima Aguilera, Luis Ruiz, Elena Montejo","doi":"10.1007/s10453-022-09762-7","DOIUrl":"10.1007/s10453-022-09762-7","url":null,"abstract":"<div><p>The aim of this study was to identify and quantify the airborne fungal spore content in the Cathedral of Jaén (South Spain). The evaluation of the microclimatic conditions and their relationship with the presence of airborne fungal spores in different indoor areas was also tested. Airborne fungal spores were recorded during 2019 by using a volumetric sampler. The Choir was the study area with the maximum airborne fungal spore concentrations, representing 55% of the total compared to the minimum representation of 12% sampled in the Museum. Regarding the seasonality, winter records represented only 20% of the total the airborne spore monitoring. Peaks in the daily spore concentrations were mainly recorded in the first half of spring and during the middle of the summer. A total of 29 taxa were identified. <i>Cladosporium</i> and <i>Aspergillus</i>/<i>Penicillium</i> were the potentially biodeteriogen fungal spores that were more frequently recorded in all of the study areas. Of the total airborne fungal spores recorded in the indoor environment, 82.5% belong to biodeteriogen fungi that, under suitable conditions for their germination, could have a negative effect on the preservation of artistic-historical heritage. The installation and correct maintenance of air-conditioning systems and the aeromycological analysis in suspected places would be recommended.\u0000</p></div>","PeriodicalId":7718,"journal":{"name":"Aerobiologia","volume":"38 4","pages":"501 - 517"},"PeriodicalIF":2.0,"publicationDate":"2022-11-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://link.springer.com/content/pdf/10.1007/s10453-022-09762-7.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"43633897","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2022-11-04DOI: 10.1007/s10453-022-09764-5
Charlotte M. Waudby, Steven C. Sherwood, Nicholas J. Osborne, Paul J. Beggs, Jane Al-Kouba, Elizabeth E. Ebert, David J. Muscatello
Inhalation of grass pollen can result in acute exacerbation of asthma, prompting questions about how grass pollen reaches metropolitan areas. We establish typical atmospheric Poaceae (grass) pollen concentrations recorded at two pollen samplers within the Sydney basin in eastern Australia and analyse their correlation with each other and meteorological variables. We determine the effect of synoptic and regional airflow on Poaceae pollen transport during a period of extreme (≥ 100 grains m−3 air) concentration and characterise the meteorology. Finally, we tested the hypothesis that most Poaceae pollen captured by the pollen samplers originated from local sources. Fifteen months of daily pollen data, three days of hourly atmospheric Poaceae pollen concentrations and fifteen months of hourly meteorology from two locations within the Sydney basin were used. Weather Research Forecasting (WRF), Hybrid Single-Particle Lagrangian Integrated Trajectory (HYSPLIT) modelling and conditional bivariate probability functions (CBPF) were used to assess Poaceae pollen transport. Most Poaceae pollen collected was estimated to be from local sources under low wind speeds. Extreme daily Poaceae pollen concentrations were rare, and there was no strong evidence to support long-distance Poaceae pollen transport into the Sydney basin or across the greater Sydney metropolitan area. Daily average pollen concentrations mask sudden increases in atmospheric Poaceae pollen, which may put a significant and sudden strain on the healthcare system. Mapping of Poaceae pollen sources within Sydney and accurate prediction of pollen concentrations are the first steps to an advanced warning system necessary to pre-empt the healthcare resources needed during pollen season.
{"title":"Combined synoptic and regional weather patterns affecting atmospheric Poaceae pollen concentrations in Sydney, Australia","authors":"Charlotte M. Waudby, Steven C. Sherwood, Nicholas J. Osborne, Paul J. Beggs, Jane Al-Kouba, Elizabeth E. Ebert, David J. Muscatello","doi":"10.1007/s10453-022-09764-5","DOIUrl":"10.1007/s10453-022-09764-5","url":null,"abstract":"<div><p>Inhalation of grass pollen can result in acute exacerbation of asthma, prompting questions about how grass pollen reaches metropolitan areas. We establish typical atmospheric Poaceae (grass) pollen concentrations recorded at two pollen samplers within the Sydney basin in eastern Australia and analyse their correlation with each other and meteorological variables. We determine the effect of synoptic and regional airflow on Poaceae pollen transport during a period of extreme (≥ 100 grains m<sup>−3</sup> air) concentration and characterise the meteorology. Finally, we tested the hypothesis that most Poaceae pollen captured by the pollen samplers originated from local sources. Fifteen months of daily pollen data, three days of hourly atmospheric Poaceae pollen concentrations and fifteen months of hourly meteorology from two locations within the Sydney basin were used. Weather Research Forecasting (WRF), Hybrid Single-Particle Lagrangian Integrated Trajectory (HYSPLIT) modelling and conditional bivariate probability functions (CBPF) were used to assess Poaceae pollen transport. Most Poaceae pollen collected was estimated to be from local sources under low wind speeds. Extreme daily Poaceae pollen concentrations were rare, and there was no strong evidence to support long-distance Poaceae pollen transport into the Sydney basin or across the greater Sydney metropolitan area. Daily average pollen concentrations mask sudden increases in atmospheric Poaceae pollen, which may put a significant and sudden strain on the healthcare system. Mapping of Poaceae pollen sources within Sydney and accurate prediction of pollen concentrations are the first steps to an advanced warning system necessary to pre-empt the healthcare resources needed during pollen season.</p></div>","PeriodicalId":7718,"journal":{"name":"Aerobiologia","volume":"38 4","pages":"533 - 555"},"PeriodicalIF":2.0,"publicationDate":"2022-11-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://link.springer.com/content/pdf/10.1007/s10453-022-09764-5.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"46537805","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2022-11-04DOI: 10.1007/s10453-022-09763-6
Nitin Kumar Singh, Gaurav Sanghvi, Manish Yadav, Hirendrasinh Padhiyar, Abhishek Gupta, Johnson Christian, Arti Thanki
Exposure to wastewater treatment system (WWTS)-associated bioaerosols is not only linked with macro/field scale systems but also facilities which are operated in micro- and/or indoor environment such as university campus and research institutions. In this context, investigations on a laboratory-scale WWTS, adopting a sequential batch biofilm process and fed with synthetic municipal wastewater, were done in terms of its global treatment performance and characterization of emitted bioaerosols species. The microbial diversity of captured bioaerosols, collected through conventional particulate matter samplers, was identified on the basis of their metabolic properties using analytical profile index, biochemical tests, and other media specific growth patterns. Monitoring and analysis results of air quality in control and experimental period revealed that particulate emission from bioreactor increased the concentration of PM10 and PM2.5 up to 26.49 ± 4.18 µg/m3 and 12.84 ± 2.48 µg/m3 from an initial level of 17.26 ± 4.58 µg/m3 and 8.70 ± 1.84 µg/m3, respectively. Microscopic observations and staining characteristics revealed that cocci shape gram-negative and bacilli shape gram-positive bacteria dominated the bioaerosols with quantitative contribution as 70% and 9%, respectively. Based on the morphological and biochemical characterization, dominant isolated genera of opportunistic pathogenic bacteria in bioaerosols were identified as Escherichia coli, Bacillus cereus, Bacillus subtilis and Pseudomonas sp. with % dominance as 38.46, 13.46, 9.61 and 25, respectively. Overall, the findings of this study reiterate the concern of biological air pollution in research laboratories and represent an inevitable aspect for the validation of bioaerosol exposure in laboratory-scale WWTS workplaces.
{"title":"Assessment and characterization of bioaerosols from an indoor environment-operated wastewater management facility: unraveling pathogenicity in research laboratories","authors":"Nitin Kumar Singh, Gaurav Sanghvi, Manish Yadav, Hirendrasinh Padhiyar, Abhishek Gupta, Johnson Christian, Arti Thanki","doi":"10.1007/s10453-022-09763-6","DOIUrl":"10.1007/s10453-022-09763-6","url":null,"abstract":"<div><p>Exposure to wastewater treatment system (WWTS)-associated bioaerosols is not only linked with macro/field scale systems but also facilities which are operated in micro- and/or indoor environment such as university campus and research institutions. In this context, investigations on a laboratory-scale WWTS, adopting a sequential batch biofilm process and fed with synthetic municipal wastewater, were done in terms of its global treatment performance and characterization of emitted bioaerosols species. The microbial diversity of captured bioaerosols, collected through conventional particulate matter samplers, was identified on the basis of their metabolic properties using analytical profile index, biochemical tests, and other media specific growth patterns. Monitoring and analysis results of air quality in control and experimental period revealed that particulate emission from bioreactor increased the concentration of PM<sub>10</sub> and PM<sub>2.5</sub> up to 26.49 ± 4.18 µg/m<sup>3</sup> and 12.84 ± 2.48 µg/m<sup>3</sup> from an initial level of 17.26 ± 4.58 µg/m<sup>3</sup> and 8.70 ± 1.84 µg/m<sup>3</sup>, respectively. Microscopic observations and staining characteristics revealed that cocci shape gram-negative and bacilli shape gram-positive bacteria dominated the bioaerosols with quantitative contribution as 70% and 9%, respectively. Based on the morphological and biochemical characterization, dominant isolated genera of opportunistic pathogenic bacteria in bioaerosols were identified as <i>Escherichia coli</i>, <i>Bacillus cereus</i>, <i>Bacillus subtilis</i> and <i>Pseudomonas </i>sp. with % dominance as 38.46, 13.46, 9.61 and 25, respectively. Overall, the findings of this study reiterate the concern of biological air pollution in research laboratories and represent an inevitable aspect for the validation of bioaerosol exposure in laboratory-scale WWTS workplaces.</p></div>","PeriodicalId":7718,"journal":{"name":"Aerobiologia","volume":"38 4","pages":"519 - 531"},"PeriodicalIF":2.0,"publicationDate":"2022-11-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"43705769","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2022-11-04DOI: 10.1007/s10453-022-09766-3
C. Radhakrishnan, M. Yogeshwaran, B. Karthick
Since research began in diatom ecology, scientists have focussed more on diatoms from aquatic habitats as opposed to aerial habitats. In this paper, we present the first dataset on diatoms from aerial habitats in the Indo-Burma hot spot. We have chosen the Blue Mountain region to collect tree mosses, an aerial habitat where diatoms thrive. We have addressed diatom composition and diversity in relation to altitude. Twenty-two moss samples were collected and 53 diatom taxa belonging to 21 genera were discovered and enumerated using light microscopy. The diatom flora of tree mosses is dominated by acidophilous genera Eunotia and Luticola, with both of the most abundant species Orthoseira roeseana and Luticola acidoclinata being euaerial and oligotraphentic diatoms. The samples from 1902-m altitude had the highest species diversity. Species richness was 8–22 diatom per sample, with an average of 14. The species accumulation curve shows that more diatom species will be discovered with additional sampling of aerial habitats in the Blue Mountain region.
{"title":"Hanging in the air: tree moss diatoms from Indo-Burma biodiversity hot spot of India","authors":"C. Radhakrishnan, M. Yogeshwaran, B. Karthick","doi":"10.1007/s10453-022-09766-3","DOIUrl":"10.1007/s10453-022-09766-3","url":null,"abstract":"<div><p>Since research began in diatom ecology, scientists have focussed more on diatoms from aquatic habitats as opposed to aerial habitats. In this paper, we present the first dataset on diatoms from aerial habitats in the Indo-Burma hot spot. We have chosen the Blue Mountain region to collect tree mosses, an aerial habitat where diatoms thrive. We have addressed diatom composition and diversity in relation to altitude. Twenty-two moss samples were collected and 53 diatom taxa belonging to 21 genera were discovered and enumerated using light microscopy. The diatom flora of tree mosses is dominated by acidophilous genera <i>Eunotia</i> and <i>Luticola</i>, with both of the most abundant species <i>Orthoseira roeseana</i> and <i>Luticola acidoclinata</i> being euaerial and oligotraphentic diatoms. The samples from 1902-m altitude had the highest species diversity. Species richness was 8–22 diatom per sample, with an average of 14. The species accumulation curve shows that more diatom species will be discovered with additional sampling of aerial habitats in the Blue Mountain region.</p></div>","PeriodicalId":7718,"journal":{"name":"Aerobiologia","volume":"38 4","pages":"557 - 566"},"PeriodicalIF":2.0,"publicationDate":"2022-11-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"43250673","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2022-11-04DOI: 10.1007/s10453-022-09769-0
Gintautas Daunys, Laura Šukienė, Lukas Vaitkevičius, Gediminas Valiulis, Mikhail Sofiev, Ingrida Šaulienė
This study investigates the use of pollen elastically scattered light images for species identification. The aim was to identify the best recognition algorithms for pollen classification based on the scattering images. A series of laboratory experiments with a Rapid-E device of Plair S.A. was conducted collecting scattering images and fluorescence spectra from pollen of 15 plant genera. The collected scattering data were supplied to 32 different setups of 8 computer vision models based on deep neural networks. The models were trained to classify the pollen types, and their performance was compared for the test sub-samples withheld from the training. Evaluation showed that most of the tested computer vision models convincingly outperform the basic convolutional neural network used in our previous studies: the accuracy gain was approaching 10% for best setups. The models of the Weakly Supervised Object Detection approach turned out to be the most accurate, but also slow. However, even the best setups still did not provide sufficient recognition accuracy barely reaching 65%–70% in the repeated tests. They also showed many false positives when applied to real-life time series collected by Rapid-E. Similar to the previous studies, fusion of the new scattering models with the fluorescence-based identification demonstrated almost 15% higher skills than either of the approaches alone reaching 77–83% of the overall classification accuracy.
{"title":"Comparison of computer vision models in application to pollen classification using light scattering","authors":"Gintautas Daunys, Laura Šukienė, Lukas Vaitkevičius, Gediminas Valiulis, Mikhail Sofiev, Ingrida Šaulienė","doi":"10.1007/s10453-022-09769-0","DOIUrl":"10.1007/s10453-022-09769-0","url":null,"abstract":"<div><p>This study investigates the use of pollen elastically scattered light images for species identification. The aim was to identify the best recognition algorithms for pollen classification based on the scattering images. A series of laboratory experiments with a Rapid-E device of Plair S.A. was conducted collecting scattering images and fluorescence spectra from pollen of 15 plant genera. The collected scattering data were supplied to 32 different setups of 8 computer vision models based on deep neural networks. The models were trained to classify the pollen types, and their performance was compared for the test sub-samples withheld from the training. Evaluation showed that most of the tested computer vision models convincingly outperform the basic convolutional neural network used in our previous studies: the accuracy gain was approaching 10% for best setups. The models of the Weakly Supervised Object Detection approach turned out to be the most accurate, but also slow. However, even the best setups still did not provide sufficient recognition accuracy barely reaching 65%–70% in the repeated tests. They also showed many false positives when applied to real-life time series collected by Rapid-E. Similar to the previous studies, fusion of the new scattering models with the fluorescence-based identification demonstrated almost 15% higher skills than either of the approaches alone reaching 77–83% of the overall classification accuracy.</p></div>","PeriodicalId":7718,"journal":{"name":"Aerobiologia","volume":"40 1","pages":"109 - 121"},"PeriodicalIF":2.2,"publicationDate":"2022-11-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://link.springer.com/content/pdf/10.1007/s10453-022-09769-0.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"48344213","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2022-11-02DOI: 10.1007/s10453-022-09767-2
Temidayo Iyabo Ibigbami, Peter Adegbenga Adeonipekun, Temilola Oluseyi, Matthew Adeleye
From clinical point of view, knowledge of the pollen season and loads in the atmosphere of every community is important so as to guide on incidence and management of pollinosis. The aim of this work therefore is to evaluate the weekly constituents of the atmospheric pollen and fern spores of two communities in Lagos Nigeria and the relationship, if any, between the weekly aeroflora and hospital reported pollinosis cases. As part of efforts to contribute to the gathering of aerobiological data in Lagos State, a weekly gravimetric sampling of two locations (Ipaja and Ogba) in Lagos, Nigeria were undertaken from January 2018–December 2018 and the reported pollinosis cases (asthma and rhinitis) were collected from the surrounding hospitals. The samplers were placed on rigid platforms at 2 m above the ground level, the harvested residues were subjected to standard palynological procedure and twenty microlitres of each sample were studied microscopically. A total of 30 pollen taxa were identified with Amaranthaceae (544) dominating the palynomorphs at Ipaja and Elaeis guineensis (347) at Ogba. Using correlation (r = 0.1, p-value = 0.55 at Ipaja while r = 0.3, p-value = 0.33 at Ogba) and RDA test at p > 0.05, there is insignificant positive relationship between pollinosis cases and abundance of palynomorphs. However, at Ipaja, RDA indicated Poaceae and Elaeis guineensis as the possible drivers for asthma cases while Amaranthaceae and fungal spores were identified as weak drivers for catarrh. At Ogba, the loess curve and correlation test showed a significant positive relationship at p < 0.05 between the reported pollinosis cases and abundance of recovered palynomorph. Elaeis guineensis, Nephrolepis sp. and Dryopteris sp. seem to be the main drivers of asthma while Casuarina sp. and fungal spores perhaps drove catarrh. Dryopteris and Nephrolepis spores are firstly implicated as possible allergenic aeroconstituents in Nigeria in this work. The results from this work provide a background reference for the general public and hypersensitive individuals on the spatial distribution of pollen grains and fern spores in the study areas of Lagos as well as being a guide to the identification of culprit allergenic aeroconstituent.
{"title":"Aeroflora and pollinosis in selected areas of Lagos, Nigeria","authors":"Temidayo Iyabo Ibigbami, Peter Adegbenga Adeonipekun, Temilola Oluseyi, Matthew Adeleye","doi":"10.1007/s10453-022-09767-2","DOIUrl":"10.1007/s10453-022-09767-2","url":null,"abstract":"<div><p>From clinical point of view, knowledge of the pollen season and loads in the atmosphere of every community is important so as to guide on incidence and management of pollinosis. The aim of this work therefore is to evaluate the weekly constituents of the atmospheric pollen and fern spores of two communities in Lagos Nigeria and the relationship, if any, between the weekly aeroflora and hospital reported pollinosis cases. As part of efforts to contribute to the gathering of aerobiological data in Lagos State, a weekly gravimetric sampling of two locations (Ipaja and Ogba) in Lagos, Nigeria were undertaken from January 2018–December 2018 and the reported pollinosis cases (asthma and rhinitis) were collected from the surrounding hospitals. The samplers were placed on rigid platforms at 2 m above the ground level, the harvested residues were subjected to standard palynological procedure and twenty microlitres of each sample were studied microscopically. A total of 30 pollen taxa were identified with Amaranthaceae (544) dominating the palynomorphs at Ipaja and <i>Elaeis guineensis</i> (347) at Ogba. Using correlation (<i>r</i> = 0.1, <i>p</i>-value = 0.55 at Ipaja while r = 0.3, <i>p</i>-value = 0.33 at Ogba) and RDA test at <i>p</i> > 0.05, there is insignificant positive relationship between pollinosis cases and abundance of palynomorphs. However, at Ipaja, RDA indicated Poaceae and <i>Elaeis guineensis</i> as the possible drivers for asthma cases while Amaranthaceae and fungal spores were identified as weak drivers for catarrh. At Ogba, the loess curve and correlation test showed a significant positive relationship at <i>p</i> < 0.05 between the reported pollinosis cases and abundance of recovered palynomorph. <i>Elaeis guineensis, Nephrolepis</i> sp. and <i>Dryopteris</i> sp. seem to be the main drivers of asthma while <i>Casuarina</i> sp. and fungal spores perhaps drove catarrh. <i>Dryopteris</i> and <i>Nephrolepis</i> spores are firstly implicated as possible allergenic aeroconstituents in Nigeria in this work. The results from this work provide a background reference for the general public and hypersensitive individuals on the spatial distribution of pollen grains and fern spores in the study areas of Lagos as well as being a guide to the identification of culprit allergenic aeroconstituent.</p></div>","PeriodicalId":7718,"journal":{"name":"Aerobiologia","volume":"38 4","pages":"567 - 580"},"PeriodicalIF":2.0,"publicationDate":"2022-11-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"43958155","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}