首页 > 最新文献

Annals of Forest Science最新文献

英文 中文
Potential soil methane oxidation in naturally regenerated oak-dominated temperate deciduous forest stands responds to soil water status regardless of their age—an intact core incubation study 天然再生橡树为主的温带落叶林中潜在的土壤甲烷氧化对土壤水分状况的反应——一项完整的核心培育研究
IF 3 3区 农林科学 Q1 FORESTRY Pub Date : 2022-06-20 DOI: 10.1186/s13595-022-01145-9
Nicolas Bras, C. Plain, D. Epron
{"title":"Potential soil methane oxidation in naturally regenerated oak-dominated temperate deciduous forest stands responds to soil water status regardless of their age—an intact core incubation study","authors":"Nicolas Bras, C. Plain, D. Epron","doi":"10.1186/s13595-022-01145-9","DOIUrl":"https://doi.org/10.1186/s13595-022-01145-9","url":null,"abstract":"","PeriodicalId":7994,"journal":{"name":"Annals of Forest Science","volume":" ","pages":""},"PeriodicalIF":3.0,"publicationDate":"2022-06-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"44852044","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
Provenance variation and seed sourcing for sessile oak (Quercus petraea (Matt.) Liebl.) in France 无梗栎(Quercus pearea)种源变异及种子来源李伯尔)在法国
IF 3 3区 农林科学 Q1 FORESTRY Pub Date : 2022-06-16 DOI: 10.1186/s13595-022-01140-0
Quentin Girard, Alexis Ducousso, Clothilde Boubée de Gramont, Jean Marc Louvet, Patrick Reynet, Brigitte Musch, Antoine Kremer
<h3 data-test="abstract-sub-heading">Key message</h3><p>Sessile oak (<i>Quercus petraea</i> (Matt.) Liebl.) provenance variation was assessed in a multisite test based on traits of economic and ecological relevance in France. While climatic drivers generated genetic clines at a range-wide scale, provenance variation in France was mainly shaped by past silvicultural regimes. We developed a multitrait approach to facilitate decision-making for seed sourcing. A set of provenance clusters is proposed, supporting recommendations for plantation programmes.</p><h3 data-test="abstract-sub-heading">Context</h3><p>Among broadleaves, sessile oak (<i>Quercus petraea)</i> is likely to spread in the context of current climate change and is increasingly planted in France. Seed sourcing is of the utmost importance for ensuring plantation success and adaptation. The selection of appropriate seed sources is highly challenging when the future climate conditions of plantation areas are uncertain.</p><h3 data-test="abstract-sub-heading">Aims</h3><p>We aimed at identifying drivers of provenance variation in <i>Q. petraea</i> and to build provenance clusters based on traits of adaptive and economic value, to ultimately support decision-making in seed sourcing.</p><h3 data-test="abstract-sub-heading">Methods</h3><p>We analysed a multisite provenance test established 30 years ago and comprising a large collection of <i>Q. petraea</i> provenances by performing phenotypic assessments of survival, growth, phenology, and stem-quality traits. We analysed climate-trait correlations at a range-wide scale and used multivariate statistics [multivariate mixed models, principal component analysis (PCA)] and classification methods [hierarchical clustering analysis (HCA), K-means method] to generate an overall clustering of french provenances.</p><h3 data-test="abstract-sub-heading">Results</h3><p>Provenance effects were highly significant regardless of the trait considered, whereas interaction effects between provenance and other experimental sources of variation were minor compared to provenance and environmental variance. There was limited variation between provenances collected in the same forest in comparison to origins of different forests. We found sharp temperature-driven genetic clines for growth and phenology-related traits at a range-wide scale. The multitrait classification approach grouped the French provenances into 11 clusters, with the members of each cluster having similar trait values. Overall, the cluster composition of provenances poorly matched the provenance regions identified on ecological grounds, but rather mirrored the silvicultural regimes implemented in the source stands in the past.</p><h3 data-test="abstract-sub-heading">Conclusions</h3><p>Two of the provenance clusters (comprising a total of 34 provenances) were identified as potentially useful sources of reproductive material. We recommend mixing seeds of different provenances from a given cluster to e
关键信息:栎(栎)(Liebl.)的种源变异在法国进行了基于经济和生态相关性特征的多站点试验。虽然气候因素在大范围内产生了遗传变异,但法国的种源变异主要是由过去的造林制度形成的。我们开发了一种多性状方法来促进种子采购决策。提出了一套种源集群,以支持种植园方案的建议。在阔叶植物中,无梗橡树(栎)可能在当前气候变化的背景下蔓延,并在法国越来越多地种植。种子采购对于确保种植园的成功和适应性至关重要。当人工林未来气候条件不确定时,选择合适的种子来源是极具挑战性的。目的:通过对黄芪种源变异的分析,建立具有适应性和经济价值的种源集群,最终为种子采购决策提供支持。方法我们分析了30年前建立的一个多地点种源试验,该试验包括大量的彼得雷乌斯种源,通过对生存、生长、物候和茎质量性状进行表型评估。我们在大范围内分析了气候性状相关性,并使用多元统计[多元混合模型,主成分分析(PCA)]和分类方法[层次聚类分析(HCA), K-means方法]来生成法国种源的总体聚类。结果无论考虑何种性状,种源效应都非常显著,而与种源与环境差异相比,种源与其他实验变异源的交互作用效应较小。在同一森林中采集的种源与不同森林的种源相比差异有限。我们在大范围内发现了生长和物候相关性状的急剧温度驱动遗传曲线。多性状分类方法将法国种源分成11个簇,每个簇的成员具有相似的性状值。总体而言,种源的集群组成与在生态基础上确定的种源区域不匹配,而是反映了过去在种源林分中实施的造林制度。结论两个种源群(共34个种源)被确定为潜在的有用的生殖材料来源。我们建议混合来自特定集群的不同种源的种子,以确保保持多样性并增强对未来气候条件的适应性。
{"title":"Provenance variation and seed sourcing for sessile oak (Quercus petraea (Matt.) Liebl.) in France","authors":"Quentin Girard, Alexis Ducousso, Clothilde Boubée de Gramont, Jean Marc Louvet, Patrick Reynet, Brigitte Musch, Antoine Kremer","doi":"10.1186/s13595-022-01140-0","DOIUrl":"https://doi.org/10.1186/s13595-022-01140-0","url":null,"abstract":"&lt;h3 data-test=\"abstract-sub-heading\"&gt;Key message&lt;/h3&gt;&lt;p&gt;Sessile oak (&lt;i&gt;Quercus petraea&lt;/i&gt; (Matt.) Liebl.) provenance variation was assessed in a multisite test based on traits of economic and ecological relevance in France. While climatic drivers generated genetic clines at a range-wide scale, provenance variation in France was mainly shaped by past silvicultural regimes. We developed a multitrait approach to facilitate decision-making for seed sourcing. A set of provenance clusters is proposed, supporting recommendations for plantation programmes.&lt;/p&gt;&lt;h3 data-test=\"abstract-sub-heading\"&gt;Context&lt;/h3&gt;&lt;p&gt;Among broadleaves, sessile oak (&lt;i&gt;Quercus petraea)&lt;/i&gt; is likely to spread in the context of current climate change and is increasingly planted in France. Seed sourcing is of the utmost importance for ensuring plantation success and adaptation. The selection of appropriate seed sources is highly challenging when the future climate conditions of plantation areas are uncertain.&lt;/p&gt;&lt;h3 data-test=\"abstract-sub-heading\"&gt;Aims&lt;/h3&gt;&lt;p&gt;We aimed at identifying drivers of provenance variation in &lt;i&gt;Q. petraea&lt;/i&gt; and to build provenance clusters based on traits of adaptive and economic value, to ultimately support decision-making in seed sourcing.&lt;/p&gt;&lt;h3 data-test=\"abstract-sub-heading\"&gt;Methods&lt;/h3&gt;&lt;p&gt;We analysed a multisite provenance test established 30 years ago and comprising a large collection of &lt;i&gt;Q. petraea&lt;/i&gt; provenances by performing phenotypic assessments of survival, growth, phenology, and stem-quality traits. We analysed climate-trait correlations at a range-wide scale and used multivariate statistics [multivariate mixed models, principal component analysis (PCA)] and classification methods [hierarchical clustering analysis (HCA), K-means method] to generate an overall clustering of french provenances.&lt;/p&gt;&lt;h3 data-test=\"abstract-sub-heading\"&gt;Results&lt;/h3&gt;&lt;p&gt;Provenance effects were highly significant regardless of the trait considered, whereas interaction effects between provenance and other experimental sources of variation were minor compared to provenance and environmental variance. There was limited variation between provenances collected in the same forest in comparison to origins of different forests. We found sharp temperature-driven genetic clines for growth and phenology-related traits at a range-wide scale. The multitrait classification approach grouped the French provenances into 11 clusters, with the members of each cluster having similar trait values. Overall, the cluster composition of provenances poorly matched the provenance regions identified on ecological grounds, but rather mirrored the silvicultural regimes implemented in the source stands in the past.&lt;/p&gt;&lt;h3 data-test=\"abstract-sub-heading\"&gt;Conclusions&lt;/h3&gt;&lt;p&gt;Two of the provenance clusters (comprising a total of 34 provenances) were identified as potentially useful sources of reproductive material. We recommend mixing seeds of different provenances from a given cluster to e","PeriodicalId":7994,"journal":{"name":"Annals of Forest Science","volume":"11 7","pages":""},"PeriodicalIF":3.0,"publicationDate":"2022-06-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138514532","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 7
Long-term and large-scale Quercus petraea population survey conducted in provenance tests installed in France 在法国安装的种源试验中进行了长期和大规模的栎种群调查
IF 3 3区 农林科学 Q1 FORESTRY Pub Date : 2022-06-16 DOI: 10.1186/s13595-022-01141-z
A. Ducousso, F. Ehrenmann, Q. Girard, J. Lamy, J. Louvet, P. Reynet, B. Musch, A. Kremer
{"title":"Long-term and large-scale Quercus petraea population survey conducted in provenance tests installed in France","authors":"A. Ducousso, F. Ehrenmann, Q. Girard, J. Lamy, J. Louvet, P. Reynet, B. Musch, A. Kremer","doi":"10.1186/s13595-022-01141-z","DOIUrl":"https://doi.org/10.1186/s13595-022-01141-z","url":null,"abstract":"","PeriodicalId":7994,"journal":{"name":"Annals of Forest Science","volume":"79 1","pages":""},"PeriodicalIF":3.0,"publicationDate":"2022-06-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"65857226","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Nitrogen deposition causes eutrophication in bryophyte communities in central and northern European forests 氮沉降导致中欧和北欧森林苔藓群落富营养化
IF 3 3区 农林科学 Q1 FORESTRY Pub Date : 2022-06-07 DOI: 10.1186/s13595-022-01148-6
James Weldon, Julian Merder, M. Ferretti, U. Grandin
{"title":"Nitrogen deposition causes eutrophication in bryophyte communities in central and northern European forests","authors":"James Weldon, Julian Merder, M. Ferretti, U. Grandin","doi":"10.1186/s13595-022-01148-6","DOIUrl":"https://doi.org/10.1186/s13595-022-01148-6","url":null,"abstract":"","PeriodicalId":7994,"journal":{"name":"Annals of Forest Science","volume":"79 1","pages":""},"PeriodicalIF":3.0,"publicationDate":"2022-06-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"65857385","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 5
Estimating gap age using tree-ring width in combination with carbon isotope discrimination in a temperate forest, Northeast China 利用树轮宽度结合碳同位素判别估算东北温带森林林隙年龄
IF 3 3区 农林科学 Q1 FORESTRY Pub Date : 2022-06-07 DOI: 10.1186/s13595-022-01147-7
Qiaoling Yan, Chunyu Zhu, Jiaojun Zhu, Lining Song, G. Geoff Wang, Deliang Lu

Key message

The accuracy of gap age estimation can be improved from 5–6 to 2 years by analyzing the annual width and carbon isotope discrimination of the rings of gap-surrounding trees.

Context

Gap age has a direct link to the composition and structure of regeneration. However, the accuracy of gap age estimation is still limited.

Aim

We aim to improve the accuracy of gap age estimation by analyzing the width in combination with carbon isotope discrimination (∆13C) of the rings of gap-surrounding trees.

Methods

Twenty-four gap-surrounding trees (nine Ulmus laciniata, eight Fraxinus rhynchophylla, and seven Juglans mandshurica) were selected from eight artificial gaps created in December 2004. First, the growth release (i.e., peak time of percent growth change) for sample trees was measured based on the tree-ring width to identify the rough time range of gap formation. Then, the ∆13C of rings during the time range were analyzed for determining the precise year of gap formation.

Results

The peak time of percent growth change occurred from 2005 to 2010 for U. laciniata, 2004 to 2008 for F. rhynchophylla, and 2002 to 2007 for J. mandshurica. Within the range of 2002 to 2010, the ∆13C of rings for all sample trees significantly reduced in 2005–2006 (p < 0.05), which was the estimated year of gap formation.

Conclusion

The introduction of ∆13C analysis could effectively reduce the estimating deviations of gap age by only considering tree-ring width analyses and finally improve the accuracy of gap age estimation within 2 years, which can provide reliable information for gap management.

通过分析林隙周围树木年轮的年宽和碳同位素判别,可将林隙年龄估算的精度从5 ~ 6年提高到2年。间隙年龄与再生的组成和结构有直接关系。然而,缺口年龄估计的准确性仍然有限。目的结合林隙周围树木年轮的碳同位素判别(∆13C),对林隙宽度进行分析,提高林隙年龄估算的精度。方法于2004年12月在8个人工林隙中选取24棵围林树木(榆9棵、黑曲柳8棵、水杨树7棵)。首先,根据树轮宽度测量样树的生长释放(即生长百分比变化的峰值时间),确定林隙形成的大致时间范围;然后,分析各年轮在时间范围内的∆13C,以确定确切的间隙形成年份。结果生长百分数变化的高峰期分别为2005 ~ 2010年、2004 ~ 2008年和2002 ~ 2007年。在2002 ~ 2010年期间,2005 ~ 2006年各样树年轮的∆13C显著降低(p <0.05),为林隙形成的估计年份。结论引入∆13C分析法可有效降低仅考虑树轮宽度分析的林隙年龄估算偏差,最终提高2年内林隙年龄估算精度,可为林隙管理提供可靠信息。
{"title":"Estimating gap age using tree-ring width in combination with carbon isotope discrimination in a temperate forest, Northeast China","authors":"Qiaoling Yan, Chunyu Zhu, Jiaojun Zhu, Lining Song, G. Geoff Wang, Deliang Lu","doi":"10.1186/s13595-022-01147-7","DOIUrl":"https://doi.org/10.1186/s13595-022-01147-7","url":null,"abstract":"<h3 data-test=\"abstract-sub-heading\">Key message</h3><p>The accuracy of gap age estimation can be improved from 5–6 to 2 years by analyzing the annual width and carbon isotope discrimination of the rings of gap-surrounding trees.</p><h3 data-test=\"abstract-sub-heading\">Context</h3><p>Gap age has a direct link to the composition and structure of regeneration. However, the accuracy of gap age estimation is still limited.</p><h3 data-test=\"abstract-sub-heading\">Aim</h3><p>We aim to improve the accuracy of gap age estimation by analyzing the width in combination with carbon isotope discrimination (∆<sup>13</sup>C) of the rings of gap-surrounding trees.</p><h3 data-test=\"abstract-sub-heading\">Methods</h3><p>Twenty-four gap-surrounding trees (nine <i>Ulmus laciniata</i>, eight <i>Fraxinus rhynchophylla</i>, and seven <i>Juglans mandshurica</i>) were selected from eight artificial gaps created in December 2004. First, the growth release (i.e., peak time of percent growth change) for sample trees was measured based on the tree-ring width to identify the rough time range of gap formation. Then, the ∆<sup>13</sup>C of rings during the time range were analyzed for determining the precise year of gap formation.</p><h3 data-test=\"abstract-sub-heading\">Results</h3><p>The peak time of percent growth change occurred from 2005 to 2010 for <i>U. laciniata</i>, 2004 to 2008 for <i>F. rhynchophylla</i>, and 2002 to 2007 for <i>J. mandshurica</i>. Within the range of 2002 to 2010, the ∆<sup>13</sup>C of rings for all sample trees significantly reduced in 2005–2006 (<i>p</i> &lt; 0.05), which was the estimated year of gap formation.</p><h3 data-test=\"abstract-sub-heading\">Conclusion</h3><p>The introduction of ∆<sup>13</sup>C analysis could effectively reduce the estimating deviations of gap age by only considering tree-ring width analyses and finally improve the accuracy of gap age estimation within 2 years, which can provide reliable information for gap management.</p>","PeriodicalId":7994,"journal":{"name":"Annals of Forest Science","volume":"10 46","pages":""},"PeriodicalIF":3.0,"publicationDate":"2022-06-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138514527","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Climate change-induced background tree mortality is exacerbated towards the warm limits of the species ranges 气候变化引起的背景树木死亡率在接近物种范围的温暖极限时加剧
IF 3 3区 农林科学 Q1 FORESTRY Pub Date : 2022-05-30 DOI: 10.1186/s13595-022-01142-y
A. Taccoen, C. Piedallu, I. Seynave, A. Gégout-Petit, J. Gégout
{"title":"Climate change-induced background tree mortality is exacerbated towards the warm limits of the species ranges","authors":"A. Taccoen, C. Piedallu, I. Seynave, A. Gégout-Petit, J. Gégout","doi":"10.1186/s13595-022-01142-y","DOIUrl":"https://doi.org/10.1186/s13595-022-01142-y","url":null,"abstract":"","PeriodicalId":7994,"journal":{"name":"Annals of Forest Science","volume":"79 1","pages":""},"PeriodicalIF":3.0,"publicationDate":"2022-05-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"65857292","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 11
Phenotypic and Genetic Characterization of Klebsiella pneumoniae Isolates from Wild Animals in Central Italy. 意大利中部野生动物肺炎克雷伯氏菌分离物的表型和遗传特征。
IF 2.7 3区 农林科学 Q1 FORESTRY Pub Date : 2022-05-25 DOI: 10.3390/ani12111347
Alexandra Chiaverini, Alessandra Cornacchia, Gabriella Centorotola, Elga Ersilia Tieri, Nadia Sulli, Ilaria Del Matto, Giorgio Iannitto, Domenico Petrone, Antonio Petrini, Francesco Pomilio

Despite Klebsiella pneumoniae being widely recognized as a nosocomial pathogen, there is a critical lack in defining its reservoirs and sources of infections. Most studies on risk factors have focused on multidrug-resistant (MDR) isolates and clinically-oriented questions. Over a two-year period, we sampled 131 wild animals including mammal and bird species from three regions of Central Italy. All typical colonies isolated from the analytical portions were confirmed by real-time PCR and identified by MALDI-TOF mass spectrometry (MALDI-TOF MS). All confirmed K. pneumoniae isolates were tested for antimicrobial susceptibility to 29 antimicrobials and subjected to whole genome sequencing. Typical colonies were detected in 17 samples (13%), which were identified as K. pneumoniae (n = 16) and as K. quasipneumoniae (n = 1) by MALDI-TOF MS. The antimicrobial susceptibility profile showed that all the isolates were resistant to β-lactams (ceftobiprole, cloxacillin, cefazolin) and tetracycline; resistance to ertapenem and trimethoprim was observed and nine out of 16 K. pneumoniae isolates (56.2%) were classified as MDR. Genomic characterization allowed the detection of fluoroquinolone resistance-associated efflux pumps, fosfomycin and β-lactamase resistance genes, and virulence genes in the overall dataset. The cluster analysis of two isolates detected from wild boar with available clinical genomes showed the closest similarity. This study highlights the link between humans, domestic animals, and wildlife, showing that the current knowledge on this ecological context is lacking and that the potential health risks are underestimated.

尽管肺炎克雷伯氏菌被广泛认为是一种院内病原体,但在确定其蓄水池和感染源方面却存在严重不足。大多数关于风险因素的研究都集中在耐多药(MDR)分离菌株和以临床为导向的问题上。在两年的时间里,我们对意大利中部三个地区的 131 种野生动物(包括哺乳动物和鸟类)进行了采样。从分析部分分离出的所有典型菌落均通过实时 PCR 进行了确认,并通过 MALDI-TOF 质谱法(MALDI-TOF MS)进行了鉴定。对所有确诊的肺炎克雷伯菌分离物进行了 29 种抗菌药的抗菌敏感性检测,并进行了全基因组测序。在 17 个样本(13%)中检测到典型菌落,通过 MALDI-TOF MS 鉴定为肺炎双球菌(16 个)和类肺炎双球菌(1 个)。抗菌药药敏谱显示,所有分离株均对β-内酰胺类药物(头孢比普、氯沙西林、头孢唑啉)和四环素耐药,对厄他培南和三甲氧苄啶耐药,16 株肺炎克氏菌分离株中有 9 株(56.2%)被归类为耐多药肺炎克氏菌。通过基因组特征分析,在整个数据集中发现了氟喹诺酮类药物耐药性相关的外排泵、磷霉素和β-内酰胺酶耐药性基因以及毒力基因。对从野猪身上检测到的两个分离株与现有临床基因组进行的聚类分析显示,这两个分离株的相似度最高。这项研究强调了人类、家畜和野生动物之间的联系,表明目前对这一生态环境缺乏了解,潜在的健康风险被低估了。
{"title":"Phenotypic and Genetic Characterization of <i>Klebsiella pneumoniae</i> Isolates from Wild Animals in Central Italy.","authors":"Alexandra Chiaverini, Alessandra Cornacchia, Gabriella Centorotola, Elga Ersilia Tieri, Nadia Sulli, Ilaria Del Matto, Giorgio Iannitto, Domenico Petrone, Antonio Petrini, Francesco Pomilio","doi":"10.3390/ani12111347","DOIUrl":"10.3390/ani12111347","url":null,"abstract":"<p><p>Despite <i>Klebsiella pneumoniae</i> being widely recognized as a nosocomial pathogen, there is a critical lack in defining its reservoirs and sources of infections. Most studies on risk factors have focused on multidrug-resistant (MDR) isolates and clinically-oriented questions. Over a two-year period, we sampled 131 wild animals including mammal and bird species from three regions of Central Italy. All typical colonies isolated from the analytical portions were confirmed by real-time PCR and identified by MALDI-TOF mass spectrometry (MALDI-TOF MS). All confirmed <i>K. pneumoniae</i> isolates were tested for antimicrobial susceptibility to 29 antimicrobials and subjected to whole genome sequencing. Typical colonies were detected in 17 samples (13%), which were identified as <i>K. pneumoniae</i> (<i>n</i> = 16) and as <i>K. quasipneumoniae</i> (<i>n</i> = 1) by MALDI-TOF MS. The antimicrobial susceptibility profile showed that all the isolates were resistant to β-lactams (ceftobiprole, cloxacillin, cefazolin) and tetracycline; resistance to ertapenem and trimethoprim was observed and nine out of 16 <i>K. pneumoniae</i> isolates (56.2%) were classified as MDR. Genomic characterization allowed the detection of fluoroquinolone resistance-associated efflux pumps, fosfomycin and β-lactamase resistance genes, and virulence genes in the overall dataset. The cluster analysis of two isolates detected from wild boar with available clinical genomes showed the closest similarity. This study highlights the link between humans, domestic animals, and wildlife, showing that the current knowledge on this ecological context is lacking and that the potential health risks are underestimated.</p>","PeriodicalId":7994,"journal":{"name":"Annals of Forest Science","volume":"41 1","pages":""},"PeriodicalIF":2.7,"publicationDate":"2022-05-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9179660/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"79849068","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Closing the gap between phenotyping and genotyping: review of advanced, image-based phenotyping technologies in forestry 缩小表现型和基因型之间的差距:林业中先进的、基于图像的表现型技术综述
IF 3 3区 农林科学 Q1 FORESTRY Pub Date : 2022-05-09 DOI: 10.1186/s13595-022-01143-x
L. Bian, Huichun Zhang, Y. Ge, J. Čepl, J. Stejskal, Y. El-Kassaby
{"title":"Closing the gap between phenotyping and genotyping: review of advanced, image-based phenotyping technologies in forestry","authors":"L. Bian, Huichun Zhang, Y. Ge, J. Čepl, J. Stejskal, Y. El-Kassaby","doi":"10.1186/s13595-022-01143-x","DOIUrl":"https://doi.org/10.1186/s13595-022-01143-x","url":null,"abstract":"","PeriodicalId":7994,"journal":{"name":"Annals of Forest Science","volume":" ","pages":""},"PeriodicalIF":3.0,"publicationDate":"2022-05-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"42690582","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 14
Stand development stages and recruitment patterns influence fine-scale spatial genetic structure in two Patagonian Nothofagus species 林分发育阶段和补充模式影响两种巴塔哥尼亚野果属植物精细尺度的空间遗传结构
IF 3 3区 农林科学 Q1 FORESTRY Pub Date : 2022-05-02 DOI: 10.1186/s13595-022-01137-9
Georgina Sola, P. Marchelli, L. Gallo, L. Chauchard, Verónica El Mujtar
{"title":"Stand development stages and recruitment patterns influence fine-scale spatial genetic structure in two Patagonian Nothofagus species","authors":"Georgina Sola, P. Marchelli, L. Gallo, L. Chauchard, Verónica El Mujtar","doi":"10.1186/s13595-022-01137-9","DOIUrl":"https://doi.org/10.1186/s13595-022-01137-9","url":null,"abstract":"","PeriodicalId":7994,"journal":{"name":"Annals of Forest Science","volume":" ","pages":""},"PeriodicalIF":3.0,"publicationDate":"2022-05-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"45616267","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Reinforcement of Percutaneous Pedicle Screw Fixation with Hydroxyapatite Granules in Patients with Osteoporotic Spine: Biomechanical Performance and Clinical Outcomes. 用羟基磷灰石颗粒加固骨质疏松脊柱患者的经皮椎弓根螺钉固定:生物力学性能和临床效果。
IF 2.4 3区 农林科学 Q1 FORESTRY Pub Date : 2022-04-23 DOI: 10.3390/medicina58050579
Haruo Kanno, Yoshito Onoda, Ko Hashimoto, Toshimi Aizawa, Hiroshi Ozawa

In percutaneous pedicle screw (PPS) fixation of the osteoporotic spine, rigid screw fixation obtaining strong stabilization is important for achieving successful treatment outcomes. However, in patients with severe osteoporosis, it is difficult to obtain PPS fixation with sufficient stability. PPS fixation has potential disadvantages with respect to maintaining secure stabilization in comparison to conventional pedicle screw fixation. In PPS fixation, bone grafting to achieve posterior spine fusion is generally not applicable and transverse connectors between the rods cannot be used to reinforce the fixation. Various augmentation methods, including additional hooks, sublaminar bands, and hydroxyapatite (HA) sticks, are available for conventional pedicle screw fixation. On the other hand, there has been no established augmentation method for PPS fixation. Recently, we developed a novel augmentation technique for PPS fixation using HA granules. This technique allows the percutaneous insertion of HA granules into the screw hole along the guidewire prior to insertion of the PPS. We have used this augmentation technique for PPS fixation in various spine surgeries in patients with osteoporosis. In our previous studies, biomechanical analyses demonstrated that PPS fixation was significantly enhanced by augmentation with HA granules in the osteoporotic lumbar spine. Furthermore, augmentation with HA granules was considered to decrease the incidence of screw loosening and implant failure following PPS fixation in patients with osteoporotic spine. In this article, we describe the surgical procedures of the augmentation method using HA granules and summarize our data from the biomechanical analysis of augmentation for PPS fixation. We also review the surgical outcomes of PPS fixation with augmentation using HA granules.

在骨质疏松症脊柱的经皮椎弓根螺钉(PPS)固定术中,获得牢固稳定的刚性螺钉固定对于取得成功的治疗效果非常重要。然而,在严重骨质疏松症患者中,很难获得具有足够稳定性的 PPS 固定。与传统的椎弓根螺钉固定相比,PPS 固定在保持稳定方面存在潜在的缺点。在 PPS 固定术中,一般不采用植骨来实现脊柱后方融合,而且不能使用杆之间的横向连接器来加固固定。在传统的椎弓根螺钉固定中,有多种增量方法可供选择,包括附加钩、层下带和羟基磷灰石(HA)棒。另一方面,PPS 固定还没有成熟的增量方法。最近,我们开发了一种使用 HA 颗粒的新型 PPS 固定增量技术。这种技术允许在插入 PPS 之前,沿导引钢丝经皮将 HA 颗粒插入螺钉孔中。我们已在骨质疏松症患者的各种脊柱手术中使用了这种用于 PPS 固定的增强技术。在我们之前的研究中,生物力学分析表明,在骨质疏松的腰椎中使用 HA 颗粒增强后,PPS 固定效果明显增强。此外,在骨质疏松性脊柱患者的 PPS 固定术后,HA 颗粒增量被认为可降低螺钉松动和植入失败的发生率。在本文中,我们介绍了使用 HA 颗粒进行增量的手术方法,并总结了我们对 PPS 固定术中增量的生物力学分析数据。我们还回顾了使用 HA 颗粒增量的 PPS 固定术的手术效果。
{"title":"Reinforcement of Percutaneous Pedicle Screw Fixation with Hydroxyapatite Granules in Patients with Osteoporotic Spine: Biomechanical Performance and Clinical Outcomes.","authors":"Haruo Kanno, Yoshito Onoda, Ko Hashimoto, Toshimi Aizawa, Hiroshi Ozawa","doi":"10.3390/medicina58050579","DOIUrl":"10.3390/medicina58050579","url":null,"abstract":"<p><p>In percutaneous pedicle screw (PPS) fixation of the osteoporotic spine, rigid screw fixation obtaining strong stabilization is important for achieving successful treatment outcomes. However, in patients with severe osteoporosis, it is difficult to obtain PPS fixation with sufficient stability. PPS fixation has potential disadvantages with respect to maintaining secure stabilization in comparison to conventional pedicle screw fixation. In PPS fixation, bone grafting to achieve posterior spine fusion is generally not applicable and transverse connectors between the rods cannot be used to reinforce the fixation. Various augmentation methods, including additional hooks, sublaminar bands, and hydroxyapatite (HA) sticks, are available for conventional pedicle screw fixation. On the other hand, there has been no established augmentation method for PPS fixation. Recently, we developed a novel augmentation technique for PPS fixation using HA granules. This technique allows the percutaneous insertion of HA granules into the screw hole along the guidewire prior to insertion of the PPS. We have used this augmentation technique for PPS fixation in various spine surgeries in patients with osteoporosis. In our previous studies, biomechanical analyses demonstrated that PPS fixation was significantly enhanced by augmentation with HA granules in the osteoporotic lumbar spine. Furthermore, augmentation with HA granules was considered to decrease the incidence of screw loosening and implant failure following PPS fixation in patients with osteoporotic spine. In this article, we describe the surgical procedures of the augmentation method using HA granules and summarize our data from the biomechanical analysis of augmentation for PPS fixation. We also review the surgical outcomes of PPS fixation with augmentation using HA granules.</p>","PeriodicalId":7994,"journal":{"name":"Annals of Forest Science","volume":"70 1","pages":""},"PeriodicalIF":2.4,"publicationDate":"2022-04-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9147225/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"74790420","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Annals of Forest Science
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1