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Increasing the intensity of regeneration treatments decreased beta diversity of temperate hardwood forest understory 20 years after disturbance 干扰后20年,增加更新处理强度降低了温带阔叶林林下的β多样性
IF 3 3区 农林科学 Q1 FORESTRY Pub Date : 2022-09-07 DOI: 10.1186/s13595-022-01152-w
Romain Jaeger, Sylvain Delagrange, Isabelle Aubin, Gilles Joanisse, Patricia Raymond, David Rivest

Context

In temperate hardwood forests, increased intensity of soil and canopy disturbances tends to increase species richness due to the establishment of numerous early-successional plant species. However, while competitive pioneer species from early stages of succession can become recalcitrant and alter patterns of natural regeneration, very few studies have examined longer-term effects of these treatments on plant biodiversity.

Aims

In this study, we investigated mid-term (ca. 20 years) effects of different regeneration treatments with varying soil and canopy disturbance intensities. We compared understory plant communities in temperate hardwood forests from all the South of Quebec (Canada).

Methods

Using circular experimental plots of 1962.5 m2 (radius = 25 m), we measured taxonomic and functional diversity indices and soil properties using four levels of disturbance intensity in six temperate hardwood forests of Quebec distributed along a longitudinal gradient. Reference forests, i.e. control forests with no silvicultural treatment known for ≥ 80 years, were compared to 20-year-old single-tree selection cuts, group-selection cuts and group-selection cuts with soil scarification.

Results

Species richness in both group-selection treatments was higher than that in reference forests. Plant equitability and beta diversity among sites in both group-selection treatments were lower than in single-tree selection cuts and control forests. More intense treatments contributed to the mid-term persistence of recalcitrant competitor species (e.g. Rubus idaeus L., Prunus pensylvanica L.f.) whereas soil scarification appears to have negative sustained effects on species known to be sensitive to regeneration treatments (e.g. Monotropa uniflora L., Dryopteris spinulosa Kuhn).

Conclusions

In temperate hardwood forests of Southern Quebec, silvicultural treatments of higher intensities resulted in detrimental effects on soil properties, especially in the surface horizon, 20 years after disturbance. This legacy, in turn, affected the composition and diversity of understory plant communities. The more intense silvicultural treatments contributed to the persistence of pioneer species better adapted to a wider range of environmental conditions and resulted in a decrease in understory plant community heterogeneity among sites. Conversely, single-tree selection cutting appeared to be the most appropriate silvicultural treatment for maintaining soil functions and heterogeneity of understory plant communities after 20 years; composition and structure being similar to long-undisturbed forests.

在温带阔叶林中,土壤和冠层扰动强度的增加往往会增加物种丰富度,这是由于许多早期演替植物物种的建立。然而,尽管来自演替早期阶段的竞争性先驱物种可能变得难以抗拒并改变自然再生的模式,但很少有研究调查这些处理对植物生物多样性的长期影响。目的研究不同土壤和冠层扰动强度下不同再生处理的中期(约20年)效应。我们比较了加拿大魁北克南部所有温带阔叶林的林下植物群落。方法在加拿大魁北克省6个温带阔叶林的1962.5 m2(半径为25 m)圆形试验地上,采用4种干扰强度测量了土壤的分类、功能多样性指数和土壤性质。对照林,即已知≥80年未进行造林处理的对照林,与20年单树选择性采伐、群体选择性采伐和群体选择性采伐进行比较。结果两组选择处理的物种丰富度均高于对照林。两组选择处理的样地间植物公平度和多样性均低于单树选择采伐林和对照林。较强的处理有助于抗性竞争物种(如Rubus idaeus L., Prunus pensylvanica L.f.)的中期持续,而土壤侵蚀似乎对已知对再生处理敏感的物种(如Monotropa uniflora L., Dryopteris spinulosa Kuhn)有负面的持续影响。结论在魁北克南部温带阔叶林中,高强度的造林处理在扰动后20年内对土壤性质产生了不利影响,尤其是表层土壤。这种遗产反过来又影响了林下植物群落的组成和多样性。造林强度越高,先锋物种的持久性越强,适应的环境条件越广,立地间林下植物群落异质性越低。相反,单树选择采伐是维持土壤功能和林下植物群落异质性的最适宜的造林处理;与长期未受干扰的森林相似的成分和结构。
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引用次数: 2
Spatial optimization of genetic thinning in seed orchards 种子园遗传间伐的空间优化
IF 3 3区 农林科学 Q1 FORESTRY Pub Date : 2022-09-01 DOI: 10.1186/s13595-022-01158-4
Kateřina Chaloupková, Milan Lstibůrek

Key message

We provide a mathematical model to determine which trees should be ruled out from the grid to promote random mating in seed orchards under genetic thinning.

Context

Genetic thinning (roguing) is a common practice in forest tree breeding to remove inferior genotypes in seed orchards, thus boosting the genetic worth of the seed crop.

Aims

To develop a general methodology for spatial optimization of genetic thinning. It should promote random mating and consider any existing seed orchard layout.

Methods

The model is based on the Optimum-Neighborhood Allocation algorithm (Chaloupková et al., Forests 10:1-6, 2019). The algorithm’s efficiency was evaluated using computer simulation. A fully randomized scheme was used as a reference. In addition, the study provides a demonstration on an actual seed orchard.

Results

Simulations confirm the method’s efficiency in promoting random mating compared to the fully randomized allocation across a wide range of selection intensities. We suggest Linear Deployment as a preferred method for calculating optimum deployment contributions at higher thinning intensities. The algorithm was programmed in R and is publicly available.

Conclusion

Breeders can use the software and follow the example to implement genetic thinning in different practical scenarios assuming any seed orchard layout. The approach enhances random mating while maximizing genetic response to selection.

我们提供了一个数学模型来确定哪些树木应该从网格中排除,以促进遗传间伐下种子果园的随机交配。遗传间伐(roguing)是林木育种中一种常见的做法,目的是去除种子园中的劣质基因型,从而提高种子作物的遗传价值。目的建立遗传变薄空间优化的通用方法。它应促进随机交配,并考虑任何现有的种子园布局。方法该模型基于最优邻域分配算法(chaloupkov等人,Forests 10:1-6, 2019)。通过计算机仿真对算法的有效性进行了评价。采用完全随机方案作为参考。此外,本研究还提供了一个实际种子园的示范。结果在大范围的选择强度下,与完全随机分配相比,该方法在促进随机交配方面效率更高。我们建议线性部署作为在更高细化强度下计算最佳部署贡献的首选方法。该算法是用R语言编写的,并且是公开的。结论育种者可以在任何种子园布局的不同实际情况下,使用该软件并参照实例实施遗传间伐。该方法增强了随机交配,同时最大限度地提高了对选择的遗传反应。
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引用次数: 1
De novo transcriptome assembly reveals characteristics of flower sex determination of Excoecaria agallocha 从头转录组组装揭示了花性决定的特征
IF 3 3区 农林科学 Q1 FORESTRY Pub Date : 2022-08-24 DOI: 10.1186/s13595-022-01156-6
Yan Zhou, Lulu Hao, Lexiang Huang, Xiaoming Tang, Danting Zhuo, Li Yun Wang, Ying Zhang

Key message

MADS-box genes family may play important roles in the flower sex determination in Excoecaria agallocha. A total of 73 MADS-box genes were identified in E. agallocha. De novo transcriptome assembly analysis suggested that AP1/FUL, AP3/PI, AGL104, and SOC1 plays potential roles in E. agallocha flower sex determination.

Context

Excoecaria agallocha is a dioecious species containing both male and female individuals producing unisexual flowers. The underlying mechanisms regulating inflorescence differentiation in these species remains poorly understood.

Aims

Flower development influences reproduction and breeding in E.agallocha, which contributes to ecological restoration in the intertidal zone.

Methods

We performed de novo transcriptome assembly analysis on male and female flowers and leaves from E. agallocha.

Results

We identified a total of 73 MADS-box genes in the E. agallocha genome, which we grouped into five distinct classes (MIKCc, Mα, Mβ, Mγ, MIKC*) after phylogenetic comparisons with J. curcas homologs. We analyzed expression profiles and suggested AP1/FUL, AP3/PI, AGL104, and SOC1 as candidate regulators of sex determination. In addition, several EaMADS genes were significantly upregulated in flowers compared to leaves.

Conclusion

Our study represents the first detailed, comprehensive evaluation of the regulation of MADS-box genes associated with sex determination in E. agallocha. The assembled transcriptomic profiles increase the genetic information available for this species and constitute an important contribution to functional studies of inflorescence genes. In turn, this will help exploring the molecular mechanisms underlying the evolution of E. agallocha.

关键信息emads -box基因家族可能在花性别决定中起重要作用。鉴定出73个MADS-box基因。从头转录组组装分析表明,AP1/FUL、AP3/PI、AGL104和SOC1可能在沉香花性别决定中发挥作用。沉香果是雌雄异株种,含有雄性和雌性个体,产生单性花。调控这些物种花序分化的潜在机制仍然知之甚少。目的花的发育影响着潮间带的生殖和繁殖,为潮间带生态恢复做出贡献。方法对沉香花雌雄花和叶片进行从头转录组组装分析。结果通过与麻瓜同源基因的系统发育比较,共鉴定出73个MADS-box基因,并将其分为MIKCc、Mα、Mβ、Mγ、MIKC* 5类。我们分析了表达谱,并建议AP1/FUL、AP3/PI、AGL104和SOC1作为性别决定的候选调节因子。此外,与叶片相比,几个EaMADS基因在花中显著上调。结论本研究首次详细、全面地评价了与性别决定相关的MADS-box基因的调控。组装的转录组谱增加了该物种的遗传信息,并对花序基因的功能研究做出了重要贡献。反过来,这将有助于探索E. agallocha进化的分子机制。
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引用次数: 0
Climate envelope analyses suggests significant rearrangements in the distribution ranges of Central European tree species 气候包络分析表明中欧树种分布范围有重大的重新安排
IF 3 3区 农林科学 Q1 FORESTRY Pub Date : 2022-08-09 DOI: 10.1186/s13595-022-01154-8
Gábor Illés, Norbert Móricz

Key message

Climate envelope analysis of nine tree species shows that Fagus sylvatica L. and Picea abies H. Karst could lose 58% and 40% of their current distribution range. Quercus pubescens Willd and Quercus cerris L. may win areas equal with 47% and 43% of their current ranges. The ratio of poorly predictable areas increases by 105% in southern and south-eastern Europe.

Context

Climate change requires adaptive forest management implementations. To achieve climate neutrality, we have to maintain and expand forest areas. Impact assessments have great importance.

Aims

The study estimates the potential climate envelopes of nine European tree species for a past period (1961–1990) and for three future periods (2011–2040, 2041–2070, 2071–2100) under two emission scenarios (RCP4.5 and RCP8.5) based on the current species distribution.

Methods

Climate envelopes were estimated simultaneously using the random forest method. Multi-resolution segmentation was used to determine the climatic characteristics of each species and their combinations. Models were limited to the geographical area within which the climatic conditions correspond to the climatic range of the training areas.

Results

Results showed remarkable changes in the extent of geographic areas of all the investigated species’ climate envelopes. Many of the tree species of Central Europe could lose significant portions of their distribution range. Adhering to the shift in climate, these tree species shift further north as well as towards higher altitudes.

Conclusion

European forests face remarkable changes, and the results support climate envelope modelling as an important tool that provides guidelines for climate adaptation to identify threatened areas or to select source and destination areas for reproductive material.

对9种树种的气候包膜分析表明,森林Fagus sylvatica L.和云杉(Picea abies H. Karst)将分别失去58%和40%的现有分布范围。野生短毛栎和cerris栎可能会赢得相当于其现有范围47%和43%的地区。在南欧和东南欧,难以预测地区的比例增加了105%。气候变化要求实施适应性森林管理。为了实现气候中和,我们必须保持和扩大森林面积。影响评估非常重要。本研究以当前树种分布为基础,估算了两种排放情景(RCP4.5和RCP8.5)下9种欧洲树种过去时期(1961-1990)和未来三个时期(2011-2040、2041-2070、2071-2100)的潜在气候包膜。方法采用随机森林法同时估算气候包络。采用多分辨率分割法确定各树种及其组合的气候特征。模型仅限于气候条件与训练地区的气候范围相对应的地理区域。结果所有被调查物种气候包络的地理区域范围变化显著。中欧的许多树种可能会失去其分布范围的很大一部分。随着气候的变化,这些树种向更北的地方以及更高的海拔转移。结论欧洲森林面临着显著的变化,气候包络度模型可作为气候适应的重要工具,为识别受威胁地区或选择生殖物质的来源和目的地提供指导。
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引用次数: 3
Tree stumps — an important but undervalued dead wood pool 树桩——一个重要但被低估的枯木池
IF 3 3区 农林科学 Q1 FORESTRY Pub Date : 2022-08-09 DOI: 10.1186/s13595-022-01155-7
Markus Didion, M. Abegg
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引用次数: 4
A dataset of Neotropical liana research focusing on the strategies of control for forest restoration and management practices 新热带藤本植物研究数据集:森林恢复控制策略与管理实践
IF 3 3区 农林科学 Q1 FORESTRY Pub Date : 2022-07-22 DOI: 10.1186/s13595-022-01153-9
Betânia da Cunha Vargas, M. T. Grombone-Guaratini, L. Morellato
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引用次数: 0
Impacts of harvesting methods on nutrient removal in Dutch forests exposed to high-nitrogen deposition 采伐方式对高氮沉降荷兰森林养分去除的影响
IF 3 3区 农林科学 Q1 FORESTRY Pub Date : 2022-07-22 DOI: 10.1186/s13595-022-01149-5
Anjo de Jong, Wim de Vries, Hans Kros, Joop Spijker
<h3 data-test="abstract-sub-heading">Context</h3><p>Forest harvest removal may cause nutrient depletion of soils, when removal of essential nutrients, including nitrogen (N), phosphorus (P), sulphur (S), calcium (Ca), potassium (K) and magnesium (Mg) exceeds their net input by deposition and weImpacts of acid atmospheric deposition on woodland athering minus leaching. Nutrient removal by harvest depends on tree species and the harvesting method, i.e. whole-tree harvesting (removal of stems and branches) versus stem wood removal only.</p><h3 data-test="abstract-sub-heading">Aim</h3><p>The aim of this study was to assess the impacts of these two harvesting methods on nutrient removal in Dutch forests exposed to high-nitrogen deposition.</p><h3 data-test="abstract-sub-heading">Methods</h3><p>To assess those impacts, we measured nutrient concentrations in stem wood and branch wood of seven major tree species in the Netherlands, i.e. Japanese larch (<i>Larix kaempferi</i> Lamb.), Norway spruce (<i>Picea abies</i> L. Karst.), Douglas fir (<i>Pseudotsuga menziesii</i> Mirb.), Scots pine (<i>Pinus sylvestris</i> L.), silver birch (<i>Betula pendula</i> Roth), beech (<i>Fagus sylvatica</i> L.) and common oak (<i>Quercus robur</i> L.). Average nutrient concentrations in stems were based on measured concentrations in heartwood, sapwood and bark and estimated volumes and densities of these compartments. Similarly, average nutrient concentrations in branches were based on measured concentrations in coarse branches, fine branches and the bark of coarse branches and estimated volumes and densities of these compartments. Removal was assessed by using the average growth rates of these tree species on nutrient poor sandy soils in the Netherlands.</p><h3 data-test="abstract-sub-heading">Results</h3><p>Compared to other countries, N concentrations in the Netherlands were higher in stems, while phosphorus, Ca, K and Mg concentrations in both stems and branches were nearly always lower. The elevated long-term N deposition levels in the Netherlands most likely contribute to this finding, since N deposition causes soil acidification reducing the availability of Ca, K, Mg and P, that could become limiting to growth. Limits for sustainable harvest, above which outputs exceed inputs of nutrients, depend on nutrient, soil type and tree species and are mostly determined by K and P and sometimes Ca, which may already be depleted at relatively low harvest levels on poor sandy soils, in particular for broadleaved species, while depletion of Mg is not likely. Nevertheless, the average growth of forests in the Netherlands appears to be slightly higher than in most other countries in Europe.</p><h3 data-test="abstract-sub-heading">Conclusion</h3><p>Overall, we thus conclude that limited P, Ca, Mg and K availability in response to elevated N deposition is reflected in reduced contents of these nutrients in stem wood and branch wood but not in growth.</p><h3 data-test="abstract-sub-
当必需营养物质,包括氮(N)、磷(P)、硫(S)、钙(Ca)、钾(K)和镁(Mg)的去除超过它们通过沉积的净输入时,森林采伐的去除可能导致土壤养分枯竭。通过采伐去除养分取决于树种和采伐方法,即整棵采伐(去除茎和枝)与仅去除茎材。目的评价两种采伐方式对高氮沉降荷兰森林养分去除的影响。方法采用荷兰7种主要树种,即日本落叶松(Larix kaempferi Lamb.)、挪威云杉(Picea abies L. Karst.)、花旗松(Pseudotsuga menziesii Mirb.)、苏地松(Pinus sylvestris L.)、白桦(Betula pendula Roth)、山毛榉(Fagus sylvatica L.)和栎树(Quercus robur L.),测定其茎材和枝材中的营养物质浓度。茎中的平均营养物质浓度基于心材、边材和树皮的测量浓度以及这些隔室的估计体积和密度。同样,树枝中的平均营养物质浓度是基于粗枝、细枝和粗枝树皮的测量浓度以及这些隔室的估计体积和密度。利用这些树种在荷兰营养贫乏的沙质土壤上的平均生长率来评估清除效果。结果与其他国家相比,荷兰茎秆中氮含量较高,而茎秆和枝条中磷、钙、钾和镁含量几乎总是较低。荷兰长期氮沉降水平的升高最有可能促成这一发现,因为氮沉降导致土壤酸化,减少了钙、钾、镁和磷的可用性,这可能会限制生长。可持续收获的限度取决于养分、土壤类型和树种,并主要由钾和磷决定,有时由钙决定,在贫瘠的沙质土壤上,特别是阔叶物种,在相对较低的收获水平上,钾和磷可能已经耗尽,而镁不太可能耗尽。然而,荷兰森林的平均生长似乎比欧洲大多数其他国家略高。综上所述,随着N沉降量的增加,茎材和枝材中磷、钙、镁和钾的有效度受到限制,但在生长过程中并未发生变化。关键信息对荷兰7种主要树种的树室养分浓度进行了评估。茎和枝中的磷、钙、钾和镁(碱阳离子)浓度大多低于其他国家,而氮浓度较高。长期的氮沉积可能导致了这些差异。尽管磷和碱阳离子的可用性较低,但平均生长并未下降。建议在养分贫乏的土壤上限制枝材的采伐,以避免磷和碱阳离子的耗竭。
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引用次数: 1
Potentials and limitations of NFIs and remote sensing in the assessment of harvest rates: a reply to Breidenbach et al. nfi和遥感在收获率评估中的潜力和局限性:对Breidenbach等人的回复。
IF 3 3区 农林科学 Q1 FORESTRY Pub Date : 2022-07-13 DOI: 10.1186/s13595-022-01150-y
Guido Ceccherini, Gregory Duveiller, Giacomo Grassi, Guido Lemoine, Valerio Avitabile, Roberto Pilli, Alessandro Cescatti

The timely and accurate monitoring of forest resources is becoming of increasing importance in light of the multi-functionality of these ecosystems and their increasing vulnerability to climate change. Remote sensing observations of tree cover and systematic ground observations from National Forest Inventories (NFIs) represent the two major sources of information to assess forest area and use. The specificity of two methods is calling for an in-depth analysis of their strengths and weaknesses and for the design of novel methods emerging from the integration of satellite and surface data. On this specific debate, a recent paper by Breidenbach et al. published in this journal suggests that the detection of a recent increase in EU forest harvest rate—as reported in Nature by Ceccherini et al.—is largely due to technical limitations of satellite-based mapping. The article centers on the difficulty of the approaches to estimate wood harvest based on remote sensing. However, it does not discuss issues with the robustness of validation approaches solely based on NFIs. Here we discuss the use of plot data as a validation set for remote sensing products, discussing potentials and limitations of both NFIs and remote sensing, and how they can be used synergistically. Finally, we highlight the need to collect in situ data that is both relevant and compatible with remote sensing products within the European Union.

鉴于森林生态系统的多功能性及其对气候变化的日益脆弱性,及时和准确地监测森林资源正变得越来越重要。树木覆盖的遥感观测和国家森林清单的系统地面观测是评估森林面积和利用的两个主要信息来源。这两种方法的特殊性要求对其优缺点进行深入分析,并设计从卫星和地面数据的综合中产生的新方法。在这一特定的争论中,Breidenbach等人最近发表在该杂志上的一篇论文表明,Ceccherini等人在《自然》杂志上报道的欧盟森林采伐率最近的增加在很大程度上是由于卫星测绘的技术限制。本文主要讨论了基于遥感的木材采伐估算方法的难点。然而,它没有讨论仅基于nfi的验证方法的鲁棒性问题。在这里,我们讨论了使用地块数据作为遥感产品的验证集,讨论了nfi和遥感的潜力和局限性,以及如何协同使用它们。最后,我们强调需要收集与欧洲联盟内遥感产品相关和兼容的实地数据。
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引用次数: 1
The rooting ability of in vitro shoot cultures established from a UK collection of the common ash (Fraxinus excelsior L.) and their ex vitro survival 英国普通白蜡树(Fraxinus excelsior L.)离体苗培养的生根能力及其离体存活率
IF 3 3区 农林科学 Q1 FORESTRY Pub Date : 2022-06-23 DOI: 10.1186/s13595-022-01146-8
T. Fenning, M. O’Donnell, K. Preedy, Aurélia Bézanger, D. Kenyon, Gustavo Lopez
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引用次数: 0
The Alberta Wildland Fuels Inventory Program (AWFIP): data description and reference tables 艾伯塔省荒地燃料库存计划(AWFIP):数据说明和参考表
IF 3 3区 农林科学 Q1 FORESTRY Pub Date : 2022-06-20 DOI: 10.1186/s13595-022-01144-w
N. Phelps, Hilary A. Cameron, Air M. Forbes, T. Schiks, David Schroeder, J. Beverly
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引用次数: 1
期刊
Annals of Forest Science
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