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Adeno-Associated Virus Toolkit to Target Diverse Brain Cells. 针对不同脑细胞的腺相关病毒工具包。
IF 13.9 1区 医学 Q1 NEUROSCIENCES Pub Date : 2022-04-19 DOI: 10.1146/annurev-neuro-111020-100834
Rosemary C. Challis, Sripriya Ravindra Kumar, Xinhong Chen, David Goertsen, G. M. Coughlin, A. Hori, Miguel R. Chuapoco, T. Otis, T. F. Miles, V. Gradinaru
Recombinant adeno-associated viruses (AAVs) are commonly used gene delivery vehicles for neuroscience research. They have two engineerable features: the capsid (outer protein shell) and cargo (encapsulated genome). These features can be modified to enhance cell type or tissue tropism and control transgene expression, respectively. Several engineered AAV capsids with unique tropisms have been identified, including variants with enhanced central nervous system transduction, cell type specificity, and retrograde transport in neurons. Pairing these AAVs with modern gene regulatory elements and state-of-the-art reporter, sensor, and effector cargo enables highly specific transgene expression for anatomical and functional analyses of brain cells and circuits. Here, we discuss recent advances that provide a comprehensive (capsid and cargo) AAV toolkit for genetic access to molecularly defined brain cell types. Expected final online publication date for the Annual Review of Neuroscience, Volume 45 is July 2022. Please see http://www.annualreviews.org/page/journal/pubdates for revised estimates.
重组腺相关病毒是神经科学研究中常用的基因传递载体。它们有两个可工程化的特征:衣壳(蛋白质外壳)和货物(封装的基因组)。这些特征可以被修饰以分别增强细胞类型或组织向性和控制转基因表达。已经鉴定出几种具有独特热带性的工程AAV衣壳,包括具有增强的中枢神经系统转导、细胞类型特异性和神经元逆行转运的变体。将这些AAV与现代基因调控元件和最先进的报告子、传感器和效应子货物配对,可以实现用于脑细胞和电路解剖和功能分析的高度特异性转基因表达。在这里,我们讨论了最近的进展,这些进展为分子定义的脑细胞类型的基因获取提供了一个全面的(衣壳和货物)AAV工具包。《神经科学年度评论》第45卷预计最终在线出版日期为2022年7月。请参阅http://www.annualreviews.org/page/journal/pubdates用于修订估算。
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引用次数: 34
Considering Organismal Physiology in Laboratory Studies of Rodent Behavior. 在啮齿动物行为的实验室研究中考虑生物生理学。
IF 13.9 1区 医学 Q1 NEUROSCIENCES Pub Date : 2022-04-08 DOI: 10.1146/annurev-neuro-111020-085500
Patricia Rubio Arzola, R. Shansky
Any experiment conducted in a rodent laboratory is done so against the backdrop of each animal's physiological state at the time of the experiment. This physiological state can be the product of multiple factors, both internal (e.g., animal sex, strain, hormone cycles, or circadian rhythms) and external (e.g., housing conditions, social status, and light/dark phases). Each of these factors has the potential to influence experimental outcomes, either independently or via interactions with others, and yet there is little consistency across laboratories in terms of the weight with which they are considered in experimental design. Such discrepancies-both in practice and in reporting-likely contribute to the perception of a reproducibility crisis in the field of behavioral neuroscience. In this review, we discuss how several of these sources of variability can impact outcomes within the realm of common learning and memory paradigms. Expected final online publication date for the Annual Review of Neuroscience, Volume 45 is July 2022. Please see http://www.annualreviews.org/page/journal/pubdates for revised estimates.
在啮齿动物实验室中进行的任何实验都是在实验时每只动物的生理状态的背景下进行的。这种生理状态可以是多种因素的产物,包括内部因素(如动物性别、压力、激素周期或昼夜节律)和外部因素(如住房条件、社会地位和光明/黑暗阶段)。这些因素中的每一个都有可能影响实验结果,无论是独立的还是通过与他人的相互作用,但在实验设计中考虑它们的重量方面,各实验室之间几乎没有一致性。这种实践和报告中的差异可能会导致行为神经科学领域的再现性危机。在这篇综述中,我们讨论了这些可变性的几种来源如何影响共同学习和记忆范式领域的结果。《神经科学年度评论》第45卷预计最终在线出版日期为2022年7月。请参阅http://www.annualreviews.org/page/journal/pubdates用于修订估算。
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引用次数: 1
Subcortical Cognition: The Fruit Below the Rind. 皮层下认知:Rind下的果实。
IF 13.9 1区 医学 Q1 NEUROSCIENCES Pub Date : 2022-04-06 DOI: 10.1146/annurev-neuro-110920-013544
K. Janacsek, Tanya M. Evans, Mariann M. Kiss, Leela Shah, H. Blumenfeld, M. Ullman
Cognitive neuroscience has highlighted the cerebral cortex while often overlooking subcortical structures. This cortical proclivity is found in basic and translational research on many aspects of cognition, especially higher cognitive domains such as language, reading, music, and math. We suggest that, for both anatomical and evolutionary reasons, multiple subcortical structures play substantial roles across higher and lower cognition. We present a comprehensive review of existing evidence, which indeed reveals extensive subcortical contributions in multiple cognitive domains. We argue that the findings are overall both real and important. Next, we advance a theoretical framework to capture the nature of (sub)cortical contributions to cognition. Finally, we propose how new subcortical cognitive roles can be identified by leveraging anatomical and evolutionary principles, and we describe specific methods that can be used to reveal subcortical cognition. Altogether, this review aims to advance cognitive neuroscience by highlighting subcortical cognition and facilitating its future investigation. Expected final online publication date for the Annual Review of Neuroscience, Volume 45 is July 2022. Please see http://www.annualreviews.org/page/journal/pubdates for revised estimates.
认知神经科学强调了大脑皮层,但往往忽视了皮层下结构。这种皮层倾向在认知的许多方面的基础和翻译研究中都有发现,尤其是在语言、阅读、音乐和数学等高级认知领域。我们认为,由于解剖学和进化的原因,多个皮层下结构在较高和较低的认知中发挥着重要作用。我们对现有证据进行了全面的回顾,这些证据确实揭示了皮层下在多个认知领域的广泛贡献。我们认为,这些发现总体上既真实又重要。接下来,我们提出了一个理论框架来捕捉(亚)皮层对认知的贡献的本质。最后,我们提出了如何利用解剖学和进化原理来识别新的皮层下认知角色,并描述了可用于揭示皮层下认知的具体方法。总之,这篇综述旨在通过强调皮层下认知并促进其未来的研究来推进认知神经科学。《神经科学年度评论》第45卷预计最终在线出版日期为2022年7月。请参阅http://www.annualreviews.org/page/journal/pubdates用于修订估算。
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引用次数: 21
Neuromodulation and Neurophysiology on the Timescale of Learning and Decision-Making. 学习和决策时间尺度上的神经调节和神经生理学。
IF 13.9 1区 医学 Q1 NEUROSCIENCES Pub Date : 2022-04-01 DOI: 10.1146/annurev-neuro-092021-125059
Cooper D. Grossman, Jeremiah Y. Cohen
Nervous systems evolved to effectively navigate the dynamics of the environment to achieve their goals. One framework used to study this fundamental problem arose in the study of learning and decision-making. In this framework, the demands of effective behavior require slow dynamics-on the scale of seconds to minutes-of networks of neurons. Here, we review the phenomena and mechanisms involved. Using vignettes from a few species and areas of the nervous system, we view neuromodulators as key substrates for temporal scaling of neuronal dynamics. Expected final online publication date for the Annual Review of Neuroscience, Volume 45 is July 2022. Please see http://www.annualreviews.org/page/journal/pubdates for revised estimates.
神经系统进化为有效地驾驭环境的动态以实现其目标。用于研究这一基本问题的一个框架出现在学习和决策研究中。在这个框架中,有效行为的需求需要神经元网络在几秒到几分钟范围内的缓慢动力学。在这里,我们回顾所涉及的现象和机制。使用来自神经系统的几个物种和区域的小插曲,我们将神经调节剂视为神经元动力学时间尺度的关键底物。《神经科学年度评论》第45卷预计最终在线出版日期为2022年7月。请参阅http://www.annualreviews.org/page/journal/pubdates用于修订估算。
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引用次数: 8
Neuroimmune Interactions in Peripheral Organs. 外周器官的神经免疫相互作用。
IF 13.9 1区 医学 Q1 NEUROSCIENCES Pub Date : 2022-04-01 DOI: 10.1146/annurev-neuro-111020-105359
Roel G J Klein Wolterink, Glendon S. Wu, I. Chiu, H. Veiga-Fernandes
Interactions between the nervous and immune systems were recognized long ago, but recent studies show that this crosstalk occurs more frequently than was previously appreciated. Moreover, technological advances have enabled the identification of the molecular mediators and receptors that enable the interaction between these two complex systems and provide new insights on the role of neuroimmune crosstalk in organismal physiology. Most neuroimmune interaction occurs at discrete anatomical locations in which neurons and immune cells colocalize. Here, we describe the interactions of the different branches of the peripheral nervous system with immune cells in various organs, including the skin, intestine, lung, and adipose tissue. We highlight how neuroimmune crosstalk orchestrates physiological processes such as host defense, tissue repair, metabolism, and thermogenesis. Unraveling these intricate relationships is invaluable to explore the therapeutic potential of neuroimmune interaction. Expected final online publication date for the Annual Review of Neuroscience, Volume 45 is July 2022. Please see http://www.annualreviews.org/page/journal/pubdates for revised estimates.
神经系统和免疫系统之间的相互作用早就被认识到了,但最近的研究表明,这种串扰的发生频率比以前更高。此外,技术进步使得能够识别分子介质和受体,从而实现这两个复杂系统之间的相互作用,并为神经免疫串扰在生物体生理学中的作用提供了新的见解。大多数神经免疫相互作用发生在神经元和免疫细胞共同定位的离散解剖位置。在这里,我们描述了外周神经系统的不同分支与各种器官中的免疫细胞的相互作用,包括皮肤、肠道、肺和脂肪组织。我们强调了神经免疫串扰如何协调宿主防御、组织修复、代谢和产热等生理过程。解开这些错综复杂的关系对于探索神经免疫相互作用的治疗潜力是非常宝贵的。《神经科学年度评论》第45卷预计最终在线出版日期为2022年7月。请参阅http://www.annualreviews.org/page/journal/pubdates用于修订估算。
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引用次数: 24
Melding Synthetic Molecules and Genetically Encoded Proteins to Forge New Tools for Neuroscience. 融合合成分子和基因编码蛋白质,打造神经科学新工具。
IF 13.9 1区 医学 Q1 NEUROSCIENCES Pub Date : 2022-02-28 DOI: 10.1146/annurev-neuro-110520-030031
Pratik Kumar, L. Lavis
Unraveling the complexity of the brain requires sophisticated methods to probe and perturb neurobiological processes with high spatiotemporal control. The field of chemical biology has produced general strategies to combine the molecular specificity of small-molecule tools with the cellular specificity of genetically encoded reagents. Here, we survey the application, refinement, and extension of these hybrid small-molecule:protein methods to problems in neuroscience, which yields powerful reagents to precisely measure and manipulate neural systems. Expected final online publication date for the Annual Review of Neuroscience, Volume 45 is July 2022. Please see http://www.annualreviews.org/page/journal/pubdates for revised estimates.
揭示大脑的复杂性需要复杂的方法来探测和干扰具有高度时空控制的神经生物学过程。化学生物学领域已经产生了将小分子工具的分子特异性与基因编码试剂的细胞特异性相结合的一般策略。在这里,我们调查了这些混合小分子:蛋白质方法的应用,改进和扩展,以解决神经科学问题,从而产生强大的试剂来精确测量和操纵神经系统。《神经科学年度评论》第45卷的最终在线出版日期预计为2022年7月。修订后的估计数请参阅http://www.annualreviews.org/page/journal/pubdates。
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引用次数: 1
How Cortical Circuits Implement Cortical Computations: Mouse Visual Cortex as a Model. 皮层电路如何实现皮层计算?以小鼠视觉皮层为模型
IF 13.9 1区 医学 Q1 NEUROSCIENCES Pub Date : 2021-07-08 Epub Date: 2021-04-29 DOI: 10.1146/annurev-neuro-102320-085825
Cristopher M Niell, Massimo Scanziani

The mouse, as a model organism to study the brain, gives us unprecedented experimental access to the mammalian cerebral cortex. By determining the cortex's cellular composition, revealing the interaction between its different components, and systematically perturbing these components, we are obtaining mechanistic insight into some of the most basic properties of cortical function. In this review, we describe recent advances in our understanding of how circuits of cortical neurons implement computations, as revealed by the study of mouse primary visual cortex. Further, we discuss how studying the mouse has broadened our understanding of the range of computations performed by visual cortex. Finally, we address how future approaches will fulfill the promise of the mouse in elucidating fundamental operations of cortex.

小鼠作为研究大脑的模式生物,为我们提供了前所未有的接触哺乳动物大脑皮层的实验机会。通过确定大脑皮层的细胞组成、揭示其不同组成部分之间的相互作用以及系统地扰乱这些组成部分,我们正在从机理上深入了解大脑皮层功能的一些最基本特性。在这篇综述中,我们将介绍通过对小鼠初级视觉皮层的研究,我们在理解皮层神经元回路如何实现计算方面取得的最新进展。此外,我们还讨论了对小鼠的研究如何拓宽了我们对视觉皮层计算范围的理解。最后,我们将讨论未来的研究方法将如何实现小鼠在阐明大脑皮层基本操作方面的承诺。
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引用次数: 0
Navigating Through Time: A Spatial Navigation Perspective on How the Brain May Encode Time. 时间导航:从空间导航角度看大脑如何编码时间。
IF 13.9 1区 医学 Q1 NEUROSCIENCES Pub Date : 2020-07-08 Epub Date: 2020-01-21 DOI: 10.1146/annurev-neuro-101419-011117
John B Issa, Gilad Tocker, Michael E Hasselmo, James G Heys, Daniel A Dombeck

Interval timing, which operates on timescales of seconds to minutes, is distributed across multiple brain regions and may use distinct circuit mechanisms as compared to millisecond timing and circadian rhythms. However, its study has proven difficult, as timing on this scale is deeply entangled with other behaviors. Several circuit and cellular mechanisms could generate sequential or ramping activity patterns that carry timing information. Here we propose that a productive approach is to draw parallels between interval timing and spatial navigation, where direct analogies can be made between the variables of interest and the mathematical operations necessitated. Along with designing experiments that isolate or disambiguate timing behavior from other variables, new techniques will facilitate studies that directly address the neural mechanisms that are responsible for interval timing.

与毫秒计时和昼夜节律相比,以秒到分钟为时间尺度的间隔计时分布在多个脑区,可能使用不同的电路机制。然而,对它的研究却很困难,因为这种时间尺度的计时与其他行为纠缠不清。有几种电路和细胞机制可以产生携带定时信息的顺序或斜坡活动模式。在此,我们建议一种有效的方法是将时间间隔计时与空间导航相提并论,这样就可以在感兴趣的变量和必要的数学运算之间建立直接的类比关系。除了设计实验将计时行为从其他变量中分离或分辨出来之外,新技术还将促进研究,直接解决导致时间间隔计时的神经机制问题。
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引用次数: 0
Interneuron Types as Attractors and Controllers. 作为吸引子和控制器的中间神经元类型。
IF 13.9 1区 医学 Q1 NEUROSCIENCES Pub Date : 2020-07-08 Epub Date: 2019-07-12 DOI: 10.1146/annurev-neuro-070918-050421
Gord Fishell, Adam Kepecs

Cortical interneurons display striking differences in shape, physiology, and other attributes, challenging us to appropriately classify them. We previously suggested that interneuron types should be defined by their role in cortical processing. Here, we revisit the question of how to codify their diversity based upon their division of labor and function as controllers of cortical information flow. We suggest that developmental trajectories provide a guide for appreciating interneuron diversity and argue that subtype identity is generated using a configurational (rather than combinatorial) code of transcription factors that produce attractor states in the underlying gene regulatory network. We present our updated three-stage model for interneuron specification: an initial cardinal step, allocating interneurons into a few major classes, followed by definitive refinement, creating subclasses upon settling within the cortex, and lastly, state determination, reflecting the incorporation of interneurons into functional circuit ensembles. We close by discussing findings indicating that major interneuron classes are both evolutionarily ancient and conserved. We propose that the complexity of cortical circuits is generated by phylogenetically old interneuron types, complemented by an evolutionary increase in principal neuron diversity. This suggests that a natural neurobiological definition of interneuron types might be derived from a match between their developmental origin and computational function.

皮层中间神经元在形状、生理和其他属性上表现出显著的差异,这给我们对它们进行适当的分类带来了挑战。我们之前提出,中间神经元类型应该根据它们在皮层加工中的作用来定义。在这里,我们重新审视了如何根据他们的分工和作为皮质信息流控制者的功能来编纂他们的多样性的问题。我们认为,发育轨迹为认识中间神经元多样性提供了指导,并认为亚型身份是通过转录因子的配置(而不是组合)代码产生的,这些转录因子在潜在的基因调控网络中产生吸引状态。我们提出了更新的中间神经元规范的三阶段模型:最初的基本步骤,将中间神经元分配到几个主要类别,随后是明确的细化,在皮层内定居后创建子类,最后是状态确定,反映了中间神经元与功能电路集成的结合。我们以讨论表明主要的中间神经元类在进化上既古老又保守的发现作为结束。我们提出,皮层回路的复杂性是由系统发育上古老的中间神经元类型产生的,辅以主要神经元多样性的进化增加。这表明中间神经元类型的自然神经生物学定义可能来源于它们的发育起源和计算功能之间的匹配。
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引用次数: 112
Neuromodulation of Brain State and Behavior. 脑状态和行为的神经调节。
IF 13.9 1区 医学 Q1 NEUROSCIENCES Pub Date : 2020-07-08 Epub Date: 2020-04-06 DOI: 10.1146/annurev-neuro-100219-105424
David A McCormick, Dennis B Nestvogel, Biyu J He

Neural activity and behavior are both notoriously variable, with responses differing widely between repeated presentation of identical stimuli or trials. Recent results in humans and animals reveal that these variations are not random in their nature, but may in fact be due in large part to rapid shifts in neural, cognitive, and behavioral states. Here we review recent advances in the understanding of rapid variations in the waking state, how variations are generated, and how they modulate neural and behavioral responses in both mice and humans. We propose that the brain has an identifiable set of states through which it wanders continuously in a nonrandom fashion, owing to the activity of both ascending modulatory and fast-acting corticocortical and subcortical-cortical neural pathways. These state variations provide the backdrop upon which the brain operates, and understanding them is critical to making progress in revealing the neural mechanisms underlying cognition and behavior.

众所周知,神经活动和行为都是多变的,在重复呈现相同的刺激或试验时,反应差异很大。最近对人类和动物的研究结果表明,这些变化在本质上不是随机的,而实际上可能在很大程度上是由于神经、认知和行为状态的快速变化。在这里,我们回顾了最近在清醒状态快速变化的理解方面的进展,变化是如何产生的,以及它们如何调节小鼠和人类的神经和行为反应。我们提出,大脑有一组可识别的状态,通过这些状态,它以一种非随机的方式连续漫游,这是由于上行调节和快速作用的皮质皮质和皮质下神经通路的活动。这些状态变化提供了大脑运作的背景,理解它们对于揭示认知和行为背后的神经机制至关重要。
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引用次数: 133
期刊
Annual review of neuroscience
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