首页 > 最新文献

Ernst Schering Research Foundation workshop最新文献

英文 中文
Molecular imaging with PET--open questions? PET分子成像——悬而未决的问题?
Pub Date : 2007-01-01 DOI: 10.1007/978-3-540-49527-7_1
P A Schubiger

Molecular imaging has become a very popular term in medicine and can be interpreted in many different ways. It is argued that a correct definition should be 'in vivo imaging of biological processes with appropriate molecular probes'. The real challenge in molecular imaging therefore is the search for the 'optimal' molecular imaging probes. It is discussed that nuclear, optical and magnetic probes can be used. However, only PET probes have the high sensitivity to be applied generally. To develop PET probes efficiently, methods for the in vitro and in vivo characterization are discussed and alternatives compared. Some open questions with respect to the reliability of animal imaging and evaluation of the imaging data will be elucidated.

分子成像已经成为医学中一个非常流行的术语,可以用许多不同的方式来解释。有人认为,正确的定义应该是“用适当的分子探针对生物过程进行体内成像”。因此,分子成像的真正挑战是寻找“最佳”分子成像探针。讨论了核探针、光探针和磁探针的应用。但只有PET探针具有较高的灵敏度,才能得到普遍应用。为了有效地开发PET探针,讨论了体外和体内表征方法并比较了替代方法。一些悬而未决的问题,关于可靠性的动物成像和评估的成像数据将阐明。
{"title":"Molecular imaging with PET--open questions?","authors":"P A Schubiger","doi":"10.1007/978-3-540-49527-7_1","DOIUrl":"https://doi.org/10.1007/978-3-540-49527-7_1","url":null,"abstract":"<p><p>Molecular imaging has become a very popular term in medicine and can be interpreted in many different ways. It is argued that a correct definition should be 'in vivo imaging of biological processes with appropriate molecular probes'. The real challenge in molecular imaging therefore is the search for the 'optimal' molecular imaging probes. It is discussed that nuclear, optical and magnetic probes can be used. However, only PET probes have the high sensitivity to be applied generally. To develop PET probes efficiently, methods for the in vitro and in vivo characterization are discussed and alternatives compared. Some open questions with respect to the reliability of animal imaging and evaluation of the imaging data will be elucidated.</p>","PeriodicalId":80277,"journal":{"name":"Ernst Schering Research Foundation workshop","volume":" 62","pages":"1-13"},"PeriodicalIF":0.0,"publicationDate":"2007-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1007/978-3-540-49527-7_1","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"26446660","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
Genotype and phenotype relationship in drug metabolism. 药物代谢的基因型与表型关系。
Pub Date : 2007-01-01 DOI: 10.1007/978-3-540-49529-1_6
I Roots, G Laschinski, F Arjomand-Nahad, J Kirchheiner, D Schwarz, J Brockmöller, I Cascorbi, T Gerloff

Pharmacogenetics, one of the fields of clinical pharmacology, studies how genetic factors influence drug response. If hereditary traits are taken into account appropriately before starting drug treatment, the type of drug and its dosage can be tailored to the individual patient's needs. Today, the relationships between dosage requirements and genetic variations in drug-metabolizing enzymes such as cytochrome P450 (CYP) 2D6, CYP2C9, and CYP2C19 or in drug transporters such as p-glycoprotein (ABCB1) and OATP-C (SLC21A6) are substantiated best. A standard dose will bring about more adverse effects than usual if enzymatic activity is lacking or feeble. Sometimes, however, therapeutic response might be better because of higher concentrations: proton pump inhibitors for eradication of Helicobacter pylori are more efficacious in carriers of a deficient CYP2C19 variant. In some cases, genetic tests can help distinguish between responders and nonresponders of a specific drug treatment, and genotype-based dosage is possible.

药物遗传学是临床药理学的一个领域,研究遗传因素如何影响药物反应。如果在开始药物治疗之前适当地考虑到遗传特征,药物的类型和剂量可以根据个体患者的需要进行调整。目前,药物代谢酶如细胞色素P450 (CYP) 2D6、CYP2C9和CYP2C19或p-糖蛋白(ABCB1)和ooatp - c (SLC21A6)等药物转运体的剂量需求与遗传变异之间的关系得到了最好的证实。如果酶活性缺乏或微弱,标准剂量会带来比平时更多的副作用。然而,有时,由于浓度较高,治疗效果可能会更好:用于根除幽门螺杆菌的质子泵抑制剂在CYP2C19变异缺陷携带者中更有效。在某些情况下,基因测试可以帮助区分特定药物治疗的应答者和无应答者,并且基于基因型的剂量是可能的。
{"title":"Genotype and phenotype relationship in drug metabolism.","authors":"I Roots,&nbsp;G Laschinski,&nbsp;F Arjomand-Nahad,&nbsp;J Kirchheiner,&nbsp;D Schwarz,&nbsp;J Brockmöller,&nbsp;I Cascorbi,&nbsp;T Gerloff","doi":"10.1007/978-3-540-49529-1_6","DOIUrl":"https://doi.org/10.1007/978-3-540-49529-1_6","url":null,"abstract":"<p><p>Pharmacogenetics, one of the fields of clinical pharmacology, studies how genetic factors influence drug response. If hereditary traits are taken into account appropriately before starting drug treatment, the type of drug and its dosage can be tailored to the individual patient's needs. Today, the relationships between dosage requirements and genetic variations in drug-metabolizing enzymes such as cytochrome P450 (CYP) 2D6, CYP2C9, and CYP2C19 or in drug transporters such as p-glycoprotein (ABCB1) and OATP-C (SLC21A6) are substantiated best. A standard dose will bring about more adverse effects than usual if enzymatic activity is lacking or feeble. Sometimes, however, therapeutic response might be better because of higher concentrations: proton pump inhibitors for eradication of Helicobacter pylori are more efficacious in carriers of a deficient CYP2C19 variant. In some cases, genetic tests can help distinguish between responders and nonresponders of a specific drug treatment, and genotype-based dosage is possible.</p>","PeriodicalId":80277,"journal":{"name":"Ernst Schering Research Foundation workshop","volume":" 59","pages":"81-100"},"PeriodicalIF":0.0,"publicationDate":"2007-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1007/978-3-540-49529-1_6","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"26374685","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 7
Preventing postmarketing changes in recommended doses and marketing withdrawals. 防止上市后推荐剂量的变化和上市后退出。
Pub Date : 2007-01-01 DOI: 10.1007/978-3-540-49529-1_16
C Peck

Recent market withdrawals of prescription drug products have brought attention to premarketing safety research. Less known but related to some drug withdrawals are postmarketing dosage changes of newly marketed drugs, including both dosage reductions and increases. These events have serious effects on patients, manufacturers, and regulatory authorities. Most of these harmful events could be avoided by intensive employment of targeted clinical pharmacology investigations to optimize dosage prior to phase III testing and regulatory approval. In this paper, the frequency and implications of postmarketing dosing changes and market withdrawals are considered in light of approaches to preventing them.

最近的处方药市场撤回引起了对上市前安全性研究的关注。鲜为人知但与某些药物停药有关的是新上市药物上市后的剂量变化,包括剂量减少和增加。这些事件对患者、制造商和监管当局都有严重影响。在III期试验和监管部门批准之前,通过密集的有针对性的临床药理学研究来优化剂量,可以避免大多数这些有害事件。在本文中,考虑了上市后剂量变化和市场撤回的频率和影响,以及防止它们的方法。
{"title":"Preventing postmarketing changes in recommended doses and marketing withdrawals.","authors":"C Peck","doi":"10.1007/978-3-540-49529-1_16","DOIUrl":"https://doi.org/10.1007/978-3-540-49529-1_16","url":null,"abstract":"<p><p>Recent market withdrawals of prescription drug products have brought attention to premarketing safety research. Less known but related to some drug withdrawals are postmarketing dosage changes of newly marketed drugs, including both dosage reductions and increases. These events have serious effects on patients, manufacturers, and regulatory authorities. Most of these harmful events could be avoided by intensive employment of targeted clinical pharmacology investigations to optimize dosage prior to phase III testing and regulatory approval. In this paper, the frequency and implications of postmarketing dosing changes and market withdrawals are considered in light of approaches to preventing them.</p>","PeriodicalId":80277,"journal":{"name":"Ernst Schering Research Foundation workshop","volume":" 59","pages":"209-16"},"PeriodicalIF":0.0,"publicationDate":"2007-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1007/978-3-540-49529-1_16","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"26375649","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
Fluorine-18 labeling of peptides and proteins. 多肽和蛋白质的氟-18标记。
Pub Date : 2007-01-01 DOI: 10.1007/978-3-540-49527-7_4
H J Wester, M Schottelius

The pool of promising peptides worthy of investigation and evaluation for clinical use is continuously filled from different sources. Driven by the promising results obtained with peptides addressing somatostatin-2 receptor positive (sst2+) neuroendocrine tumours, other peptides targeting further receptor systems are being studied and evaluated. Progress in profiling the density and incidence of peptide hormone receptors in human cancer has initiated and will further promote research on the corresponding peptidic binders. In addition, industrial pharmaceutical research will be another significant source of peptides in the future. A recent prognosis revealed that about 50% of the drugs entering clinical trials in the next years will be peptides. The extensive research activities in genomics and proteomics will point out and quantify new and already known target structures upregulated in specific diseases. Based on the knowledge of their endogenous ligands or via selection of suitable candidates by phage display, suitable peptide ligands for e.g. membrane associated receptors can be identified and thus allow targeting of such binding sites. Thus, bioactive peptides specifically addressing relevant molecular targets are expected to become an important class of tracers, also due to the possibility of bridging imaging with therapeutic approaches. In this brief overview a summary of methods and strategies for the 18F-labeling of peptides and proteins is given.

值得研究和评估临床应用的有前途的肽池不断从不同的来源填补。由于针对生长抑素-2受体阳性(sst2+)神经内分泌肿瘤的多肽获得了令人鼓舞的结果,其他针对其他受体系统的多肽正在被研究和评估。人类癌症中肽激素受体的密度和发生率的分析已经开始并将进一步促进相应肽结合物的研究。此外,工业制药研究将是未来多肽的另一个重要来源。最近的一项预测显示,未来几年进入临床试验的药物中约有50%将是多肽。基因组学和蛋白质组学的广泛研究活动将指出和量化新的和已知的在特定疾病中上调的目标结构。基于对内源性配体的了解或通过噬菌体展示选择合适的候选体,可以确定合适的肽配体,例如膜相关受体,从而允许靶向这些结合位点。因此,特异性处理相关分子靶点的生物活性肽有望成为一类重要的示踪剂,这也是由于成像与治疗方法之间的桥接可能性。在这个简短的概述总结了方法和策略的18f标记肽和蛋白质给出。
{"title":"Fluorine-18 labeling of peptides and proteins.","authors":"H J Wester,&nbsp;M Schottelius","doi":"10.1007/978-3-540-49527-7_4","DOIUrl":"https://doi.org/10.1007/978-3-540-49527-7_4","url":null,"abstract":"<p><p>The pool of promising peptides worthy of investigation and evaluation for clinical use is continuously filled from different sources. Driven by the promising results obtained with peptides addressing somatostatin-2 receptor positive (sst2+) neuroendocrine tumours, other peptides targeting further receptor systems are being studied and evaluated. Progress in profiling the density and incidence of peptide hormone receptors in human cancer has initiated and will further promote research on the corresponding peptidic binders. In addition, industrial pharmaceutical research will be another significant source of peptides in the future. A recent prognosis revealed that about 50% of the drugs entering clinical trials in the next years will be peptides. The extensive research activities in genomics and proteomics will point out and quantify new and already known target structures upregulated in specific diseases. Based on the knowledge of their endogenous ligands or via selection of suitable candidates by phage display, suitable peptide ligands for e.g. membrane associated receptors can be identified and thus allow targeting of such binding sites. Thus, bioactive peptides specifically addressing relevant molecular targets are expected to become an important class of tracers, also due to the possibility of bridging imaging with therapeutic approaches. In this brief overview a summary of methods and strategies for the 18F-labeling of peptides and proteins is given.</p>","PeriodicalId":80277,"journal":{"name":"Ernst Schering Research Foundation workshop","volume":" 62","pages":"79-111"},"PeriodicalIF":0.0,"publicationDate":"2007-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1007/978-3-540-49527-7_4","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"26446663","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 48
Can cell systems biology rescue drug discovery? 细胞系统生物学能拯救药物发现吗?
Pub Date : 2007-01-01 DOI: 10.1007/978-3-540-31339-7_8
E C Butcher

The focus of innovation in current drug discovery is on new targets, yet compound efficacy and safety in biological models of disease, not target selection, qualify drug candidates for the clinic. We consider a biology-driven approach to drug discovery based on screening compounds by automated response profiling in complex human cell systems-based disease models. Drug discovery through cell systems biology could significantly reduce the time and cost of new drug development.

当前药物发现的创新重点是在新的靶点上,然而在疾病生物学模型中的复合疗效和安全性,而不是靶点选择,使候选药物符合临床条件。我们考虑了一种生物学驱动的药物发现方法,该方法基于基于复杂人类细胞系统疾病模型的自动反应分析筛选化合物。通过细胞系统生物学发现药物可以显著减少新药开发的时间和成本。
{"title":"Can cell systems biology rescue drug discovery?","authors":"E C Butcher","doi":"10.1007/978-3-540-31339-7_8","DOIUrl":"https://doi.org/10.1007/978-3-540-31339-7_8","url":null,"abstract":"<p><p>The focus of innovation in current drug discovery is on new targets, yet compound efficacy and safety in biological models of disease, not target selection, qualify drug candidates for the clinic. We consider a biology-driven approach to drug discovery based on screening compounds by automated response profiling in complex human cell systems-based disease models. Drug discovery through cell systems biology could significantly reduce the time and cost of new drug development.</p>","PeriodicalId":80277,"journal":{"name":"Ernst Schering Research Foundation workshop","volume":" 61","pages":"153-72"},"PeriodicalIF":0.0,"publicationDate":"2007-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"26510664","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 28
68Ga-PET radiopharmacy: A generator-based alternative to 18F-radiopharmacy. 68Ga-PET放射药理学:基于发生器的18f放射药理学替代品。
Pub Date : 2007-01-01 DOI: 10.1007/978-3-540-49527-7_8
H R Maecke, J P André

Positron emission tomography (PET) is becoming a dominating method in the field of molecular imaging. Most commonly used radionuclides are accelerator produced 11C and 18F. An alternative method to label biomolecules is the use of metallic positron emitters; among them 68Ga is the most promising as it can be produced from a generator system consisting of an inorganic or organic matrix immobilizing the parent radionuclide 68Ge. Germanium-68 has a long half-life of 271 days which allows the production of long-lived, potentially very cost-effective generator systems. A commercial generator from Obninsk, Russia, is available which uses TiO2 as an inorganic matrix to immobilize 68Ge in the oxidation state IV+. 68Ge(IV) is chemically sufficiently different to allow efficient separation from 68Ga(III). Ga3+ is redox-inert; its coordination chemistry is dominated by its hard acid character. A variety of mono- and bifunctional chelators were developed which allow immobilization of 68Ga3+ and convenient coupling to biomolecules. Especially peptides targeting G-protein coupled receptors overexpressed on human tumour cells have been studied preclinically and in patient studies showing high and specific tumour uptake and specific localization. 68Ga-radiopharmacy may indeed be an alternative to 18F-based radiopharmacy. Freeze-dried, kit-formulated precursors along with the generator may be provided, similar to the 99Mo/99mTc-based radiopharmacy, still the mainstay of nuclear medicine.

正电子发射断层扫描(PET)正在成为分子成像领域的主导手段。最常用的放射性核素是加速器产生的11C和18F。标记生物分子的另一种方法是使用金属正电子发射器;其中,68Ga是最有前途的,因为它可以由固定母体放射性核素68Ge的无机或有机基质组成的发生器系统产生。锗-68的半衰期很长,为271天,这使得生产长寿命的、可能非常具有成本效益的发电系统成为可能。来自俄罗斯奥布宁斯克的一种商用发生器可用,它使用TiO2作为无机基质将68Ge固定在氧化态IV+。68Ge(IV)的化学性质与68Ga(III)完全不同,可以有效地分离。Ga3+是氧化还原惰性的;其配位化学性质主要由其硬酸性质决定。开发了多种单功能和双功能螯合剂,可以固定68Ga3+并方便地与生物分子偶联。特别是在临床前和患者研究中,针对人类肿瘤细胞上过表达的g蛋白偶联受体的肽显示出高度和特异性的肿瘤摄取和特异性定位。68ga -放射药理学可能确实是18f -放射药理学的替代品。冻干的、成套配制的前体可以连同发生器一起提供,类似于基于99Mo/ 99mtc的放射药学,仍然是核医学的支柱。
{"title":"68Ga-PET radiopharmacy: A generator-based alternative to 18F-radiopharmacy.","authors":"H R Maecke,&nbsp;J P André","doi":"10.1007/978-3-540-49527-7_8","DOIUrl":"https://doi.org/10.1007/978-3-540-49527-7_8","url":null,"abstract":"<p><p>Positron emission tomography (PET) is becoming a dominating method in the field of molecular imaging. Most commonly used radionuclides are accelerator produced 11C and 18F. An alternative method to label biomolecules is the use of metallic positron emitters; among them 68Ga is the most promising as it can be produced from a generator system consisting of an inorganic or organic matrix immobilizing the parent radionuclide 68Ge. Germanium-68 has a long half-life of 271 days which allows the production of long-lived, potentially very cost-effective generator systems. A commercial generator from Obninsk, Russia, is available which uses TiO2 as an inorganic matrix to immobilize 68Ge in the oxidation state IV+. 68Ge(IV) is chemically sufficiently different to allow efficient separation from 68Ga(III). Ga3+ is redox-inert; its coordination chemistry is dominated by its hard acid character. A variety of mono- and bifunctional chelators were developed which allow immobilization of 68Ga3+ and convenient coupling to biomolecules. Especially peptides targeting G-protein coupled receptors overexpressed on human tumour cells have been studied preclinically and in patient studies showing high and specific tumour uptake and specific localization. 68Ga-radiopharmacy may indeed be an alternative to 18F-based radiopharmacy. Freeze-dried, kit-formulated precursors along with the generator may be provided, similar to the 99Mo/99mTc-based radiopharmacy, still the mainstay of nuclear medicine.</p>","PeriodicalId":80277,"journal":{"name":"Ernst Schering Research Foundation workshop","volume":" 62","pages":"215-42"},"PeriodicalIF":0.0,"publicationDate":"2007-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1007/978-3-540-49527-7_8","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"26446555","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 53
Applying a causal framework to system modeling. 将因果框架应用于系统建模。
Pub Date : 2007-01-01 DOI: 10.1007/978-3-540-31339-7_7
C A Lieu, K O Elliston

The emerging field of systems biology represents a revolution in our ability to understand biology. Perhaps for the first time in history we have the capacity to pursue biological understanding using a computer-aided integrative approach in conjunction with classical reductionist approaches. Technology has given us not only the ability to identify and measure the individual molecules of life and the way they change, but also the power to study these molecules and their changes in the context of a big picture. It is through the creation of a computer-aided framework for human understanding that we can begin to comprehend how these collections of molecules act as integrated biological systems, and to utilize this knowledge to rationally engineer the future of science and medicine.

系统生物学这一新兴领域代表了我们理解生物学能力的一场革命。也许在历史上,我们第一次有能力利用计算机辅助的综合方法与经典的还原论方法相结合来追求生物学的理解。科技不仅给了我们识别和测量生命个体分子及其变化方式的能力,也给了我们在大背景下研究这些分子及其变化的能力。正是通过为人类理解创造一个计算机辅助框架,我们才能开始理解这些分子的集合如何作为一个完整的生物系统,并利用这些知识来合理地设计科学和医学的未来。
{"title":"Applying a causal framework to system modeling.","authors":"C A Lieu,&nbsp;K O Elliston","doi":"10.1007/978-3-540-31339-7_7","DOIUrl":"https://doi.org/10.1007/978-3-540-31339-7_7","url":null,"abstract":"<p><p>The emerging field of systems biology represents a revolution in our ability to understand biology. Perhaps for the first time in history we have the capacity to pursue biological understanding using a computer-aided integrative approach in conjunction with classical reductionist approaches. Technology has given us not only the ability to identify and measure the individual molecules of life and the way they change, but also the power to study these molecules and their changes in the context of a big picture. It is through the creation of a computer-aided framework for human understanding that we can begin to comprehend how these collections of molecules act as integrated biological systems, and to utilize this knowledge to rationally engineer the future of science and medicine.</p>","PeriodicalId":80277,"journal":{"name":"Ernst Schering Research Foundation workshop","volume":" 61","pages":"139-52"},"PeriodicalIF":0.0,"publicationDate":"2007-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1007/978-3-540-31339-7_7","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"26510663","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 6
Network genomics. 网络基因组学。
Pub Date : 2007-01-01 DOI: 10.1142/9789812770011_0026
T. Ideker
Network genomics is an emerging area of bioengineering which models the influence of genes (hence, genomics) in the context of a larger biomolecular system or network. A biomolecular network is a comprehensive collection of molecules and molecular interactions that regulate cellular function. Molecular interactions include physical binding events between proteins and proteins, proteins and DNA, or proteins and drugs, as well as genetic relationships dictating how genes combine to cause particular phenotypes. Thinking about biological systems as networks goes hand-in-hand with our ability to experimentally measure and define biomolecular interactions at large scale. Once we have catalogued all of the interactions present in a network, we may begin to ask questions such as: How many different molecules are bound by a typical protein? What is the topological structure of the network? How are signals transmitted through the network in response to internal and external events? Which parts of the network are evolutionarily conserved across species, and which parts differ? Perhaps most importantly, we can begin to use the interaction network as a storehouse of information from which to extract and construct computer-based models of cellular processes and disease.
网络基因组学是生物工程的一个新兴领域,它在更大的生物分子系统或网络的背景下模拟基因(因此,基因组学)的影响。生物分子网络是调节细胞功能的分子和分子相互作用的综合集合。分子相互作用包括蛋白质与蛋白质、蛋白质与DNA或蛋白质与药物之间的物理结合事件,以及决定基因如何结合以引起特定表型的遗传关系。将生物系统视为网络与我们在大规模实验中测量和定义生物分子相互作用的能力密切相关。一旦我们对网络中存在的所有相互作用进行了编目,我们可能会开始提出这样的问题:一个典型的蛋白质结合了多少种不同的分子?网络的拓扑结构是什么?信号如何通过网络传输以响应内部和外部事件?网络的哪些部分在物种间进化上是保守的,哪些部分是不同的?也许最重要的是,我们可以开始使用交互网络作为信息库,从中提取和构建基于计算机的细胞过程和疾病模型。
{"title":"Network genomics.","authors":"T. Ideker","doi":"10.1142/9789812770011_0026","DOIUrl":"https://doi.org/10.1142/9789812770011_0026","url":null,"abstract":"Network genomics is an emerging area of bioengineering which models the influence of genes (hence, genomics) in the context of a larger biomolecular system or network. A biomolecular network is a comprehensive collection of molecules and molecular interactions that regulate cellular function. Molecular interactions include physical binding events between proteins and proteins, proteins and DNA, or proteins and drugs, as well as genetic relationships dictating how genes combine to cause particular phenotypes. Thinking about biological systems as networks goes hand-in-hand with our ability to experimentally measure and define biomolecular interactions at large scale. Once we have catalogued all of the interactions present in a network, we may begin to ask questions such as: How many different molecules are bound by a typical protein? What is the topological structure of the network? How are signals transmitted through the network in response to internal and external events? Which parts of the network are evolutionarily conserved across species, and which parts differ? Perhaps most importantly, we can begin to use the interaction network as a storehouse of information from which to extract and construct computer-based models of cellular processes and disease.","PeriodicalId":80277,"journal":{"name":"Ernst Schering Research Foundation workshop","volume":"61 1","pages":"89-115"},"PeriodicalIF":0.0,"publicationDate":"2007-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"64023263","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 11
Tracking stem cells in vivo. 在体内追踪干细胞。
Pub Date : 2006-01-01 DOI: 10.1007/3-540-31437-7_8
R Yoneyama, E R Chemaly, R J Hajjar

Stem cells have been targeted to many organ systems specifically to replace scarred organs and to rejuvenate diseased organs. Even though our understanding of the versatility of stem cells is slowly unraveling, tracking these cells as they enter the body has become a very important field of study. In this chapter, we review various modalities for imaging stem cells and assess the advantages and shortcomings of each technique.

干细胞已被应用于许多器官系统,专门用于替换疤痕器官和使病变器官恢复活力。尽管我们对干细胞的多功能性的理解正在慢慢地解开,当这些细胞进入人体时追踪它们已经成为一个非常重要的研究领域。在本章中,我们回顾了干细胞成像的各种方式,并评估了每种技术的优点和缺点。
{"title":"Tracking stem cells in vivo.","authors":"R Yoneyama,&nbsp;E R Chemaly,&nbsp;R J Hajjar","doi":"10.1007/3-540-31437-7_8","DOIUrl":"https://doi.org/10.1007/3-540-31437-7_8","url":null,"abstract":"<p><p>Stem cells have been targeted to many organ systems specifically to replace scarred organs and to rejuvenate diseased organs. Even though our understanding of the versatility of stem cells is slowly unraveling, tracking these cells as they enter the body has become a very important field of study. In this chapter, we review various modalities for imaging stem cells and assess the advantages and shortcomings of each technique.</p>","PeriodicalId":80277,"journal":{"name":"Ernst Schering Research Foundation workshop","volume":" 60","pages":"99-109"},"PeriodicalIF":0.0,"publicationDate":"2006-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1007/3-540-31437-7_8","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"26193767","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 7
Establishment of nuclear transfer embryonic stem cell lines from adult somatic cells by nuclear transfer and its application. 成体体细胞核移植胚胎干细胞系的建立及其应用。
Pub Date : 2006-01-01 DOI: 10.1007/3-540-31437-7_9
T Wakayama

Nuclear transfer can be used to generate embryonic stem cell (ntESC) lines from a patient's own somatic cells. We have shown that ntESCs can be generated relatively easily from a variety of mouse genotypes and cell types of both sexes, even though it may be more difficult to generate clones directly. Several reports have already demonstrated that ntESCs can be used in regenerative medicine in order to rescue immunodeficient or infertile phenotypes. However, it is unclear whether ntES cells are identical to fertilized embryonic stem cells (ESCs). This review seeks to describe the phenotype and possible abnormalities of ntESC lines.

核移植可用于从患者自身的体细胞中产生胚胎干细胞(ntESC)系。我们已经证明,可以相对容易地从各种小鼠基因型和雌雄细胞类型中产生ntESCs,尽管直接产生克隆可能更困难。一些报告已经证明,ntESCs可以用于再生医学,以挽救免疫缺陷或不育表型。然而,目前尚不清楚ntES细胞是否与受精胚胎干细胞(ESCs)相同。本文旨在描述ntESC系的表型和可能的异常。
{"title":"Establishment of nuclear transfer embryonic stem cell lines from adult somatic cells by nuclear transfer and its application.","authors":"T Wakayama","doi":"10.1007/3-540-31437-7_9","DOIUrl":"https://doi.org/10.1007/3-540-31437-7_9","url":null,"abstract":"<p><p>Nuclear transfer can be used to generate embryonic stem cell (ntESC) lines from a patient's own somatic cells. We have shown that ntESCs can be generated relatively easily from a variety of mouse genotypes and cell types of both sexes, even though it may be more difficult to generate clones directly. Several reports have already demonstrated that ntESCs can be used in regenerative medicine in order to rescue immunodeficient or infertile phenotypes. However, it is unclear whether ntES cells are identical to fertilized embryonic stem cells (ESCs). This review seeks to describe the phenotype and possible abnormalities of ntESC lines.</p>","PeriodicalId":80277,"journal":{"name":"Ernst Schering Research Foundation workshop","volume":" 60","pages":"111-23"},"PeriodicalIF":0.0,"publicationDate":"2006-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1007/3-540-31437-7_9","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"26193768","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 8
期刊
Ernst Schering Research Foundation workshop
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1