首页 > 最新文献

Annual review of pharmacology and toxicology最新文献

英文 中文
Molecular Activation of NLRP3 Inflammasome by Particles and Crystals: A Continuing Challenge of Immunology and Toxicology. 颗粒和晶体对 NLRP3 炎症体的分子激活:免疫学和毒理学的持续挑战。
IF 12.5 1区 医学 Q1 PHARMACOLOGY & PHARMACY Pub Date : 2024-01-23 Epub Date: 2023-09-14 DOI: 10.1146/annurev-pharmtox-031023-125300
Qiang Ma, Chol Seung Lim

Particles and crystals constitute a unique class of toxic agents that humans are constantly exposed to both endogenously and from the environment. Deposition of particulates in the body is associated with a range of diseases and toxicity. The mechanism by which particulates cause disease remains poorly understood due to the lack of mechanistic insights into particle-biological interactions. Recent research has revealed that many particles and crystals activate the NLRP3 inflammasome, an intracellular pattern-recognition receptor. Activated NLRP3 forms a supramolecular complex with an adaptor protein to activate caspase 1, which in turn activates IL-1β and IL-18 to instigate inflammation. Genetic ablation and pharmacological inhibition of the NLRP3 inflammasome dampen inflammatory responses to particulates. Nonetheless, how particulates activate NLRP3 remains a challenging question. From this perspective, we discuss our current understanding of and progress on revealing the function and mode of action of the NLRP3 inflammasome in mediating adaptive and pathologic responses to particulates in health and disease.

微粒和晶体是一类独特的有毒物质,人类经常会从内源性和环境中接触到它们。微粒在人体内的沉积与一系列疾病和毒性有关。由于缺乏对微粒与生物相互作用机理的深入了解,人们对微粒致病的机理仍然知之甚少。最近的研究发现,许多微粒和晶体会激活细胞内模式识别受体 NLRP3 炎性体。激活的 NLRP3 与适配蛋白形成超分子复合物,激活 Caspase 1,进而激活 IL-1β 和 IL-18,引发炎症。基因消融和药物抑制 NLRP3 炎性体可抑制对微粒的炎症反应。然而,微粒如何激活 NLRP3 仍是一个具有挑战性的问题。从这个角度出发,我们讨论了我们目前对 NLRP3 炎性体在介导健康和疾病中对微粒的适应性和病理性反应方面的功能和作用模式的理解以及在揭示其功能和作用模式方面取得的进展。
{"title":"Molecular Activation of NLRP3 Inflammasome by Particles and Crystals: A Continuing Challenge of Immunology and Toxicology.","authors":"Qiang Ma, Chol Seung Lim","doi":"10.1146/annurev-pharmtox-031023-125300","DOIUrl":"10.1146/annurev-pharmtox-031023-125300","url":null,"abstract":"<p><p>Particles and crystals constitute a unique class of toxic agents that humans are constantly exposed to both endogenously and from the environment. Deposition of particulates in the body is associated with a range of diseases and toxicity. The mechanism by which particulates cause disease remains poorly understood due to the lack of mechanistic insights into particle-biological interactions. Recent research has revealed that many particles and crystals activate the NLRP3 inflammasome, an intracellular pattern-recognition receptor. Activated NLRP3 forms a supramolecular complex with an adaptor protein to activate caspase 1, which in turn activates IL-1β and IL-18 to instigate inflammation. Genetic ablation and pharmacological inhibition of the NLRP3 inflammasome dampen inflammatory responses to particulates. Nonetheless, how particulates activate NLRP3 remains a challenging question. From this perspective, we discuss our current understanding of and progress on revealing the function and mode of action of the NLRP3 inflammasome in mediating adaptive and pathologic responses to particulates in health and disease.</p>","PeriodicalId":8057,"journal":{"name":"Annual review of pharmacology and toxicology","volume":" ","pages":"417-433"},"PeriodicalIF":12.5,"publicationDate":"2024-01-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10842595/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10233153","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Anthracycline Toxicity: Light at the End of the Tunnel? 蒽环素毒性:隧道尽头的光?
IF 11.2 1区 医学 Q1 PHARMACOLOGY & PHARMACY Pub Date : 2024-01-23 Epub Date: 2023-10-03 DOI: 10.1146/annurev-pharmtox-022823-035521
Romina B Cejas, Kateryna Petrykey, Yadav Sapkota, Paul W Burridge

Anthracycline-induced cardiotoxicity (AIC) is a serious and common side effect of anthracycline therapy. Identification of genes and genetic variants associated with AIC risk has clinical potential as a cardiotoxicity predictive tool and to allow the development of personalized therapies. In this review, we provide an overview of the function of known AIC genes identified by association studies and categorize them based on their mechanistic implication in AIC. We also discuss the importance of functional validation of AIC-associated variants in human induced pluripotent stem cell-derived cardiomyocytes (hiPSC-CMs) to advance the implementation of genetic predictive biomarkers. Finally, we review how patient-specific hiPSC-CMs can be used to identify novel patient-relevant functional targets and for the discovery of cardioprotectant drugs to prevent AIC. Implementation of functional validation and use of hiPSC-CMs for drug discovery will identify the next generation of highly effective and personalized cardioprotectants and accelerate the inclusion of approved AIC biomarkers into clinical practice.

蒽环类药物引起的心脏毒性(AIC)是蒽环类治疗的一个严重而常见的副作用。识别与AIC风险相关的基因和遗传变异具有作为心脏毒性预测工具的临床潜力,并允许开发个性化疗法。在这篇综述中,我们概述了通过关联研究鉴定的已知AIC基因的功能,并根据其在AIC中的机制含义对其进行了分类。我们还讨论了在人类诱导多能干细胞衍生的心肌细胞(hiPSC CMs)中AIC相关变体的功能验证对推进遗传预测生物标志物的实施的重要性。最后,我们回顾了如何使用患者特异性hiPSC CMs来识别新的患者相关功能靶点,并发现预防AIC的心脏保护药物。实施功能验证和使用hiPSC CMs进行药物发现将确定下一代高效和个性化的心脏保护剂,并加快将批准的AIC生物标志物纳入临床实践。《药理学与毒理学年度评论》第64卷预计最终在线出版日期为2024年1月。请参阅http://www.annualreviews.org/page/journal/pubdates用于修订估算。
{"title":"Anthracycline Toxicity: Light at the End of the Tunnel?","authors":"Romina B Cejas, Kateryna Petrykey, Yadav Sapkota, Paul W Burridge","doi":"10.1146/annurev-pharmtox-022823-035521","DOIUrl":"10.1146/annurev-pharmtox-022823-035521","url":null,"abstract":"<p><p>Anthracycline-induced cardiotoxicity (AIC) is a serious and common side effect of anthracycline therapy. Identification of genes and genetic variants associated with AIC risk has clinical potential as a cardiotoxicity predictive tool and to allow the development of personalized therapies. In this review, we provide an overview of the function of known AIC genes identified by association studies and categorize them based on their mechanistic implication in AIC. We also discuss the importance of functional validation of AIC-associated variants in human induced pluripotent stem cell-derived cardiomyocytes (hiPSC-CMs) to advance the implementation of genetic predictive biomarkers. Finally, we review how patient-specific hiPSC-CMs can be used to identify novel patient-relevant functional targets and for the discovery of cardioprotectant drugs to prevent AIC. Implementation of functional validation and use of hiPSC-CMs for drug discovery will identify the next generation of highly effective and personalized cardioprotectants and accelerate the inclusion of approved AIC biomarkers into clinical practice.</p>","PeriodicalId":8057,"journal":{"name":"Annual review of pharmacology and toxicology","volume":" ","pages":"115-134"},"PeriodicalIF":11.2,"publicationDate":"2024-01-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11260185/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41105562","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Deciphering Drug Targets and Actions with Single-Cell and Spatial Resolution. 以单细胞和空间分辨率解密药物靶点和作用。
IF 12.5 1区 医学 Q1 PHARMACOLOGY & PHARMACY Pub Date : 2024-01-23 Epub Date: 2023-09-18 DOI: 10.1146/annurev-pharmtox-033123-123610
Zhengyuan Pang, Benjamin F Cravatt, Li Ye

Recent advances in chemical, molecular, and genetic approaches have provided us with an unprecedented capacity to identify drug-target interactions across the whole proteome and genome. Meanwhile, rapid developments of single-cell and spatial omics technologies are revolutionizing our understanding of the molecular architecture of biological systems. However, a significant gap remains in how we align our understanding of drug actions, traditionally based on molecular affinities, with the in vivo cellular and spatial tissue heterogeneity revealed by these newer techniques. Here, we review state-of-the-art methods for profiling drug-target interactions and emerging multiomics tools to delineate the tissue heterogeneity at single-cell resolution. Highlighting the recent technical advances enabling high-resolution, multiplexable in situ small-molecule drug imaging (clearing-assisted tissue click chemistry, or CATCH), we foresee the integration of single-cell and spatial omics platforms, data, and concepts into the future framework of defining and understanding in vivo drug-target interactions and mechanisms of actions.

化学、分子和遗传方法的最新进展为我们提供了前所未有的能力,使我们能够识别整个蛋白质组和基因组中药物与靶标的相互作用。同时,单细胞和空间全息技术的快速发展正在彻底改变我们对生物系统分子结构的理解。然而,在如何将我们对药物作用的理解(传统上基于分子亲和力)与这些较新技术所揭示的体内细胞和空间组织异质性相统一方面,我们仍然存在巨大差距。在此,我们回顾了剖析药物与靶点相互作用的最新方法,以及在单细胞分辨率下描述组织异质性的新兴多组学工具。我们重点介绍了最近的技术进步,这些进步实现了高分辨率、可复用的原位小分子药物成像(清除辅助组织点击化学,或 CATCH),我们预计单细胞和空间 omics 平台、数据和概念将被整合到定义和理解体内药物-靶点相互作用和作用机制的未来框架中。
{"title":"Deciphering Drug Targets and Actions with Single-Cell and Spatial Resolution.","authors":"Zhengyuan Pang, Benjamin F Cravatt, Li Ye","doi":"10.1146/annurev-pharmtox-033123-123610","DOIUrl":"10.1146/annurev-pharmtox-033123-123610","url":null,"abstract":"<p><p>Recent advances in chemical, molecular, and genetic approaches have provided us with an unprecedented capacity to identify drug-target interactions across the whole proteome and genome. Meanwhile, rapid developments of single-cell and spatial omics technologies are revolutionizing our understanding of the molecular architecture of biological systems. However, a significant gap remains in how we align our understanding of drug actions, traditionally based on molecular affinities, with the in vivo cellular and spatial tissue heterogeneity revealed by these newer techniques. Here, we review state-of-the-art methods for profiling drug-target interactions and emerging multiomics tools to delineate the tissue heterogeneity at single-cell resolution. Highlighting the recent technical advances enabling high-resolution, multiplexable in situ small-molecule drug imaging (clearing-assisted tissue click chemistry, or CATCH), we foresee the integration of single-cell and spatial omics platforms, data, and concepts into the future framework of defining and understanding in vivo drug-target interactions and mechanisms of actions.</p>","PeriodicalId":8057,"journal":{"name":"Annual review of pharmacology and toxicology","volume":" ","pages":"507-526"},"PeriodicalIF":12.5,"publicationDate":"2024-01-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10311190","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Alcohol Use Disorder Treatment: Problems and Solutions. 酒精使用障碍治疗:问题与解决方案。
IF 12.5 1区 医学 Q1 PHARMACOLOGY & PHARMACY Pub Date : 2024-01-23 DOI: 10.1146/annurev-pharmtox-031323-115847
George F Koob

Alcohol use disorder (AUD) afflicts over 29 million individuals and causes more than 140,000 deaths annually in the United States. A heuristic framework for AUD includes a three-stage cycle-binge/intoxication, withdrawal/negative affect, and preoccupation/anticipation-that provides a starting point for exploring the heterogeneity of AUD with regard to treatment. Effective behavioral health treatments and US Food and Drug Administration-approved medications are available but greatly underutilized, creating a major treatment gap. This review outlines challenges that face the alcohol field in closing this treatment gap and offers solutions, including broadening end points for the approval of medications for the treatment of AUD; increasing the uptake of screening, brief intervention, and referral to treatment; addressing stigma; implementing a heuristic definition of recovery; engaging early treatment; and educating health-care professionals and the public about challenges that are associated with alcohol misuse. Additionally, this review focuses on broadening potential targets for the development of medications for AUD by utilizing the three-stage heuristic model of addiction that outlines domains of dysfunction in AUD and the mediating neurobiology of AUD.

在美国,酒精使用障碍(AUD)困扰着 2900 多万人,每年导致超过 14 万人死亡。AUD 的启发式框架包括三个阶段的循环--酗酒/中毒、戒断/负性情绪和妄想/期待--这为探索 AUD 在治疗方面的异质性提供了一个起点。有效的行为健康治疗方法和美国食品和药物管理局批准的药物虽已上市,但使用率却很低,这就造成了治疗上的巨大差距。本综述概述了酒精领域在缩小治疗差距方面所面临的挑战,并提出了解决方案,包括扩大批准治疗 AUD 药物的终点;增加筛查、简单干预和转诊治疗的使用率;解决污名化问题;实施启发式康复定义;参与早期治疗;教育医疗保健专业人员和公众了解与酒精滥用相关的挑战。此外,本综述还重点探讨了如何利用成瘾三阶段启发式模型(该模型概述了 AUD 的功能障碍领域和 AUD 的中介神经生物学)拓宽 AUD 药物开发的潜在目标。
{"title":"Alcohol Use Disorder Treatment: Problems and Solutions.","authors":"George F Koob","doi":"10.1146/annurev-pharmtox-031323-115847","DOIUrl":"10.1146/annurev-pharmtox-031323-115847","url":null,"abstract":"<p><p>Alcohol use disorder (AUD) afflicts over 29 million individuals and causes more than 140,000 deaths annually in the United States. A heuristic framework for AUD includes a three-stage cycle-binge/intoxication, withdrawal/negative affect, and preoccupation/anticipation-that provides a starting point for exploring the heterogeneity of AUD with regard to treatment. Effective behavioral health treatments and US Food and Drug Administration-approved medications are available but greatly underutilized, creating a major treatment gap. This review outlines challenges that face the alcohol field in closing this treatment gap and offers solutions, including broadening end points for the approval of medications for the treatment of AUD; increasing the uptake of screening, brief intervention, and referral to treatment; addressing stigma; implementing a heuristic definition of recovery; engaging early treatment; and educating health-care professionals and the public about challenges that are associated with alcohol misuse. Additionally, this review focuses on broadening potential targets for the development of medications for AUD by utilizing the three-stage heuristic model of addiction that outlines domains of dysfunction in AUD and the mediating neurobiology of AUD.</p>","PeriodicalId":8057,"journal":{"name":"Annual review of pharmacology and toxicology","volume":"64 ","pages":"255-275"},"PeriodicalIF":12.5,"publicationDate":"2024-01-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139541418","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Introduction to the Theme "Pharmacological Individuality: New Insights and Strategies for Personalized and Precise Drug Treatment". “药理学个性化:个性化和精确药物治疗的新见解和策略”主题简介。
IF 12.5 1区 医学 Q1 PHARMACOLOGY & PHARMACY Pub Date : 2023-10-10 DOI: 10.1146/annurev-pharmtox-090123-010552
Urs A Meyer, Susan G Amara, Terrence F Blaschke, Paul A Insel

The reviews in Volume 64 of the Annual Review of Pharmacology and Toxicology cover diverse topics. A common theme in many of the reviews is the interindividual variability in the clinical response to drugs. Highlighted areas include emerging developments in pharmacogenomics that can predict the personal risk for drug inefficacy and/or adverse drug reactions. Other reviews focus on the use of circulating biomarkers to define drug metabolism phenotypes and the effect of circadian regulation on drug response. Another emerging technology, digital twins that model individual patients, is used to generate computational simulations of drug effects and identify optimal personalized treatments. Another variable that may affect clinical outcomes, the nocebo response (an adverse reaction to a placebo), complicates clinical trials. These reviews further document that pharmacological individuality is an essential component of the concepts of personalized medicine and precision medicine and will likely have an important impact on patient care. Expected final online publication date for the Annual Review of Pharmacology and Toxicology, Volume 64 is January 2024. Please see http://www.annualreviews.org/page/journal/pubdates for revised estimates.

《药理学和毒理学年度评论》第64卷中的评论涵盖了不同的主题。许多综述中的一个共同主题是药物临床反应的个体间变异性。重点领域包括药物基因组学的新发展,可以预测药物无效和/或药物不良反应的个人风险。其他综述集中在使用循环生物标志物来定义药物代谢表型和昼夜节律调节对药物反应的影响。另一项新兴技术,为个体患者建模的数字双胞胎,用于生成药物效果的计算模拟,并确定最佳的个性化治疗方法。另一个可能影响临床结果的变量,nocebo反应(对安慰剂的不良反应),使临床试验变得复杂。这些综述进一步证明,药理学个性是个性化医学和精准医学概念的重要组成部分,可能会对患者护理产生重要影响。《药理学与毒理学年度评论》第64卷预计最终在线出版日期为2024年1月。请参阅http://www.annualreviews.org/page/journal/pubdates用于修订估算。
{"title":"Introduction to the Theme \"Pharmacological Individuality: New Insights and Strategies for Personalized and Precise Drug Treatment\".","authors":"Urs A Meyer,&nbsp;Susan G Amara,&nbsp;Terrence F Blaschke,&nbsp;Paul A Insel","doi":"10.1146/annurev-pharmtox-090123-010552","DOIUrl":"https://doi.org/10.1146/annurev-pharmtox-090123-010552","url":null,"abstract":"<p><p>The reviews in Volume 64 of the <i>Annual Review of Pharmacology and Toxicology</i> cover diverse topics. A common theme in many of the reviews is the interindividual variability in the clinical response to drugs. Highlighted areas include emerging developments in pharmacogenomics that can predict the personal risk for drug inefficacy and/or adverse drug reactions. Other reviews focus on the use of circulating biomarkers to define drug metabolism phenotypes and the effect of circadian regulation on drug response. Another emerging technology, digital twins that model individual patients, is used to generate computational simulations of drug effects and identify optimal personalized treatments. Another variable that may affect clinical outcomes, the nocebo response (an adverse reaction to a placebo), complicates clinical trials. These reviews further document that pharmacological individuality is an essential component of the concepts of personalized medicine and precision medicine and will likely have an important impact on patient care. Expected final online publication date for the <i>Annual Review of Pharmacology and Toxicology</i>, Volume 64 is January 2024. Please see http://www.annualreviews.org/page/journal/pubdates for revised estimates.</p>","PeriodicalId":8057,"journal":{"name":"Annual review of pharmacology and toxicology","volume":" ","pages":""},"PeriodicalIF":12.5,"publicationDate":"2023-10-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41231900","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Introduction to the Theme “Pharmacological Individuality: New Insights and Strategies for Personalized and Precise Drug Treatment” 主题“药物个性:个性化和精准药物治疗的新见解和新策略”导论
1区 医学 Q1 PHARMACOLOGY & PHARMACY Pub Date : 2023-10-10 DOI: 10.1146/annurev-physiol-090123-010552
Urs A. Meyer, Susan G. Amara, Terrence F. Blaschke, Paul A. Insel
The reviews in Volume 64 of the Annual Review of Pharmacology and Toxicology cover diverse topics. A common theme in many of the reviews is the interindividual variability in the clinical response to drugs. Highlighted areas include emerging developments in pharmacogenomics that can predict the personal risk for drug inefficacy and/or adverse drug reactions. Other reviews focus on the use of circulating biomarkers to define drug metabolism phenotypes and the effect of circadian regulation on drug response. Another emerging technology, digital twins that model individual patients, is used to generate computational simulations of drug effects and identify optimal personalized treatments. Another variable that may affect clinical outcomes, the nocebo response (an adverse reaction to a placebo), complicates clinical trials. These reviews further document that pharmacological individuality is an essential component of the concepts of personalized medicine and precision medicine and will likely have an important impact on patient care. Expected final online publication date for the Annual Review of Pharmacology and Toxicology, Volume 64 is January 2024. Please see http://www.annualreviews.org/page/journal/pubdates for revised estimates.
药理学和毒理学年度评论第64卷的评论涵盖了不同的主题。在许多评论中,一个共同的主题是临床对药物反应的个体差异。重点领域包括药物基因组学的新兴发展,可以预测药物无效和/或药物不良反应的个人风险。其他综述侧重于使用循环生物标志物来定义药物代谢表型和昼夜节律调节对药物反应的影响。另一项新兴技术是数字双胞胎,它可以为单个患者建模,用于生成药物效果的计算模拟,并确定最佳的个性化治疗方案。另一个可能影响临床结果的变量,反安慰剂反应(对安慰剂的不良反应),使临床试验复杂化。这些综述进一步证明,药理学个性是个性化医疗和精准医疗概念的重要组成部分,并可能对患者护理产生重要影响。《药理学和毒理学年度评论》第64卷的最终在线出版日期预计为2024年1月。修订后的估计数请参阅http://www.annualreviews.org/page/journal/pubdates。
{"title":"Introduction to the Theme “Pharmacological Individuality: New Insights and Strategies for Personalized and Precise Drug Treatment”","authors":"Urs A. Meyer, Susan G. Amara, Terrence F. Blaschke, Paul A. Insel","doi":"10.1146/annurev-physiol-090123-010552","DOIUrl":"https://doi.org/10.1146/annurev-physiol-090123-010552","url":null,"abstract":"The reviews in Volume 64 of the Annual Review of Pharmacology and Toxicology cover diverse topics. A common theme in many of the reviews is the interindividual variability in the clinical response to drugs. Highlighted areas include emerging developments in pharmacogenomics that can predict the personal risk for drug inefficacy and/or adverse drug reactions. Other reviews focus on the use of circulating biomarkers to define drug metabolism phenotypes and the effect of circadian regulation on drug response. Another emerging technology, digital twins that model individual patients, is used to generate computational simulations of drug effects and identify optimal personalized treatments. Another variable that may affect clinical outcomes, the nocebo response (an adverse reaction to a placebo), complicates clinical trials. These reviews further document that pharmacological individuality is an essential component of the concepts of personalized medicine and precision medicine and will likely have an important impact on patient care. Expected final online publication date for the Annual Review of Pharmacology and Toxicology, Volume 64 is January 2024. Please see http://www.annualreviews.org/page/journal/pubdates for revised estimates.","PeriodicalId":8057,"journal":{"name":"Annual review of pharmacology and toxicology","volume":"24 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-10-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"136294071","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Artificial Intelligence and Machine Learning for Lead-to-Candidate Decision-Making and Beyond. 人工智能和机器学习在候选人决策中的应用。
IF 12.5 1区 医学 Q1 PHARMACOLOGY & PHARMACY Pub Date : 2023-01-20 DOI: 10.1146/annurev-pharmtox-051921-023255
Douglas McNair

The use of artificial intelligence (AI) and machine learning (ML) in pharmaceutical research and development has to date focused on research: target identification; docking-, fragment-, and motif-based generation of compound libraries; modeling of synthesis feasibility; rank-ordering likely hits according to structural and chemometric similarity to compounds having known activity and affinity to the target(s); optimizing a smaller library for synthesis and high-throughput screening; and combining evidence from screening to support hit-to-lead decisions. Applying AI/ML methods to lead optimization and lead-to-candidate (L2C) decision-making has shown slower progress, especially regarding predicting absorption, distribution, metabolism, excretion, and toxicology properties. The present review surveys reasons why this is so, reports progress that has occurred in recent years, and summarizes some of the issues that remain. Effective AI/ML tools to derisk L2C and later phases of development are important to accelerate the pharmaceutical development process, ameliorate escalating development costs, and achieve greater success rates.

迄今为止,人工智能(AI)和机器学习(ML)在药物研发中的应用主要集中在以下几个方面:目标识别;基于对接、片段和基序的复合库生成;综合可行性建模;根据与已知活性和亲和力的化合物的结构和化学相似性对可能的命中进行排序;优化一个较小的文库用于合成和高通量筛选;并结合筛选的证据来支持热门领导决策。将AI/ML方法应用于先导物优化和候选先导物(L2C)决策的进展较慢,特别是在预测吸收、分布、代谢、排泄和毒理学特性方面。本报告调查了出现这种情况的原因,报告了近年来取得的进展,并总结了仍然存在的一些问题。有效的AI/ML工具来降低L2C和后期开发阶段的风险,对于加速药物开发过程、改善不断上升的开发成本和实现更高的成功率非常重要。
{"title":"Artificial Intelligence and Machine Learning for Lead-to-Candidate Decision-Making and Beyond.","authors":"Douglas McNair","doi":"10.1146/annurev-pharmtox-051921-023255","DOIUrl":"https://doi.org/10.1146/annurev-pharmtox-051921-023255","url":null,"abstract":"<p><p>The use of artificial intelligence (AI) and machine learning (ML) in pharmaceutical research and development has to date focused on research: target identification; docking-, fragment-, and motif-based generation of compound libraries; modeling of synthesis feasibility; rank-ordering likely hits according to structural and chemometric similarity to compounds having known activity and affinity to the target(s); optimizing a smaller library for synthesis and high-throughput screening; and combining evidence from screening to support hit-to-lead decisions. Applying AI/ML methods to lead optimization and lead-to-candidate (L2C) decision-making has shown slower progress, especially regarding predicting absorption, distribution, metabolism, excretion, and toxicology properties. The present review surveys reasons why this is so, reports progress that has occurred in recent years, and summarizes some of the issues that remain. Effective AI/ML tools to derisk L2C and later phases of development are important to accelerate the pharmaceutical development process, ameliorate escalating development costs, and achieve greater success rates.</p>","PeriodicalId":8057,"journal":{"name":"Annual review of pharmacology and toxicology","volume":"63 ","pages":"77-97"},"PeriodicalIF":12.5,"publicationDate":"2023-01-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10570891","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 5
Structures of Leukotriene Biosynthetic Enzymes and Development of New Therapeutics. 白三烯生物合成酶的结构及新疗法的研究进展。
IF 12.5 1区 医学 Q1 PHARMACOLOGY & PHARMACY Pub Date : 2023-01-20 DOI: 10.1146/annurev-pharmtox-051921-085014
Jesper Z Haeggström, Marcia E Newcomer

Leukotrienes are potent immune-regulating lipid mediators with patho-genic roles in inflammatory and allergic diseases, particularly asthma. These autacoids also contribute to low-grade inflammation, a hallmark of cardiovascular, neurodegenerative, metabolic, and tumor diseases. Biosynthesis of leukotrienes involves release and oxidative metabolism of arachidonic acid and proceeds via a set of cytosolic and integral membrane enzymes that are typically expressed by cells of the innate immune system. In activated cells, these enzymes traffic and assemble at the endoplasmic and perinuclear membrane, together comprising a biosynthetic complex. Here we describe recent advances in our molecular understanding of the protein components of the leukotriene-synthesizing enzyme machinery and also briefly touch upon the leukotriene receptors. Moreover, we discuss emerging opportunities for pharmacological intervention and development of new therapeutics.

白三烯是一种有效的免疫调节脂质介质,在炎症和过敏性疾病,特别是哮喘中具有致病作用。这些类自身物质也会导致低度炎症,这是心血管、神经退行性、代谢和肿瘤疾病的标志。白三烯的生物合成涉及花生四烯酸的释放和氧化代谢,并通过一组胞质和整体膜酶进行,这些酶通常由先天免疫系统的细胞表达。在活化的细胞中,这些酶在内质膜和核周膜上运输和组装,共同组成生物合成复合物。在这里,我们描述了在白三烯合成酶机制的蛋白质成分的分子理解的最新进展,并简要地谈到了白三烯受体。此外,我们讨论了药理学干预和新疗法发展的新机会。
{"title":"Structures of Leukotriene Biosynthetic Enzymes and Development of New Therapeutics.","authors":"Jesper Z Haeggström,&nbsp;Marcia E Newcomer","doi":"10.1146/annurev-pharmtox-051921-085014","DOIUrl":"https://doi.org/10.1146/annurev-pharmtox-051921-085014","url":null,"abstract":"<p><p>Leukotrienes are potent immune-regulating lipid mediators with patho-genic roles in inflammatory and allergic diseases, particularly asthma. These autacoids also contribute to low-grade inflammation, a hallmark of cardiovascular, neurodegenerative, metabolic, and tumor diseases. Biosynthesis of leukotrienes involves release and oxidative metabolism of arachidonic acid and proceeds via a set of cytosolic and integral membrane enzymes that are typically expressed by cells of the innate immune system. In activated cells, these enzymes traffic and assemble at the endoplasmic and perinuclear membrane, together comprising a biosynthetic complex. Here we describe recent advances in our molecular understanding of the protein components of the leukotriene-synthesizing enzyme machinery and also briefly touch upon the leukotriene receptors. Moreover, we discuss emerging opportunities for pharmacological intervention and development of new therapeutics.</p>","PeriodicalId":8057,"journal":{"name":"Annual review of pharmacology and toxicology","volume":"63 ","pages":"407-428"},"PeriodicalIF":12.5,"publicationDate":"2023-01-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10570675","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 7
Pharmacological Induction of Granulocyte Cell Death as Therapeutic Strategy. 药物诱导粒细胞死亡作为治疗策略。
IF 12.5 1区 医学 Q1 PHARMACOLOGY & PHARMACY Pub Date : 2023-01-20 DOI: 10.1146/annurev-pharmtox-051921-115130
Thomas Kaufmann, Hans-Uwe Simon

Apoptosis is central for the maintenance of health. In the immune system, apoptosis guarantees proper development of immune cells and shutdown of immune reactions by the coordinated elimination of activated immune cells. Limitation of the life span of granulocytes is important, as overactivation of these cells is associated with chronic inflammation and collateral tissue damage. Consequently, targeted induction of granulocyte apoptosis may be beneficial in the course of respective immune disorders. Anti-inflammatory drugs such as glucocorticoids and monoclonal antibodies against IL-5Rα exert their function in part by triggering eosinophil apoptosis. Agonistic antibodies targeting Siglec-8 or death receptors are tested (pre)clinically. Moreover, a new class of inhibitors targeting antiapoptotic BCL-2 proteins shows great promise for anticancer treatments. Because of their specificity and tolerable side effects, these so-called BH3 mimetics may be worthwhile to evaluate in inflammatory disorders. Here, we review past and recent data on pharmacological apoptosis induction of granulocytes and highlight respective therapeutic potential.

细胞凋亡是维持健康的核心。在免疫系统中,细胞凋亡通过协调消除活化的免疫细胞来保证免疫细胞的正常发育和关闭免疫反应。限制粒细胞的寿命是很重要的,因为这些细胞的过度激活与慢性炎症和附带组织损伤有关。因此,靶向诱导粒细胞凋亡在各自的免疫紊乱过程中可能是有益的。抗炎药物如糖皮质激素和抗IL-5Rα单克隆抗体部分通过触发嗜酸性粒细胞凋亡发挥作用。针对Siglec-8或死亡受体的激动抗体进行临床(预)测试。此外,一类新的靶向抗凋亡BCL-2蛋白的抑制剂显示出抗癌治疗的巨大希望。由于它们的特异性和可耐受的副作用,这些所谓的BH3模拟物可能值得在炎症性疾病中进行评估。在这里,我们回顾了过去和最近的数据在药物诱导粒细胞凋亡和强调各自的治疗潜力。
{"title":"Pharmacological Induction of Granulocyte Cell Death as Therapeutic Strategy.","authors":"Thomas Kaufmann,&nbsp;Hans-Uwe Simon","doi":"10.1146/annurev-pharmtox-051921-115130","DOIUrl":"https://doi.org/10.1146/annurev-pharmtox-051921-115130","url":null,"abstract":"<p><p>Apoptosis is central for the maintenance of health. In the immune system, apoptosis guarantees proper development of immune cells and shutdown of immune reactions by the coordinated elimination of activated immune cells. Limitation of the life span of granulocytes is important, as overactivation of these cells is associated with chronic inflammation and collateral tissue damage. Consequently, targeted induction of granulocyte apoptosis may be beneficial in the course of respective immune disorders. Anti-inflammatory drugs such as glucocorticoids and monoclonal antibodies against IL-5Rα exert their function in part by triggering eosinophil apoptosis. Agonistic antibodies targeting Siglec-8 or death receptors are tested (pre)clinically. Moreover, a new class of inhibitors targeting antiapoptotic BCL-2 proteins shows great promise for anticancer treatments. Because of their specificity and tolerable side effects, these so-called BH3 mimetics may be worthwhile to evaluate in inflammatory disorders. Here, we review past and recent data on pharmacological apoptosis induction of granulocytes and highlight respective therapeutic potential.</p>","PeriodicalId":8057,"journal":{"name":"Annual review of pharmacology and toxicology","volume":"63 ","pages":"231-247"},"PeriodicalIF":12.5,"publicationDate":"2023-01-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9121203","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
Fibroblast Growth Factor-Based Pharmacotherapies for the Treatment of Obesity-Related Metabolic Complications. 基于成纤维细胞生长因子的药物疗法治疗肥胖相关代谢并发症。
IF 12.5 1区 医学 Q1 PHARMACOLOGY & PHARMACY Pub Date : 2023-01-20 DOI: 10.1146/annurev-pharmtox-032322-093904
Leigang Jin, Ranyao Yang, Leiluo Geng, Aimin Xu

The fibroblast growth factor (FGF) family, which comprises 22 structurally related proteins, plays diverse roles in cell proliferation, differentiation, development, and metabolism. Among them, two classical members (FGF1 and FGF4) and two endocrine members (FGF19 and FGF21) are important regulators of whole-body energy homeostasis, glucose/lipid metabolism, and insulin sensitivity. Preclinical studies have consistently demonstrated the therapeutic benefits of these FGFs for the treatment of obesity, diabetes, dyslipidemia, and nonalcoholic steatohepatitis (NASH). Several genetically engineered FGF19 and FGF21 analogs with improved pharmacodynamic and pharmacokinetic properties have been developed and progressed into various stages of clinical trials. These FGF analogs are effective in alleviating hepatic steatosis, steatohepatitis, and liver fibrosis in biopsy-confirmed NASH patients, whereas their antidiabetic and antiobesity effects are mildand vary greatly in different clinical trials. This review summarizes recent advances in biopharmaceutical development of FGF-based therapies against obesity-related metabolic complications, highlights major challenges in clinical implementation, and discusses possible strategies to overcome these hurdles.

成纤维细胞生长因子(FGF)家族由22种结构相关蛋白组成,在细胞增殖、分化、发育和代谢等方面发挥着多种作用。其中,两个经典成员(FGF1和FGF4)和两个内分泌成员(FGF19和FGF21)是全身能量稳态、糖/脂代谢和胰岛素敏感性的重要调节因子。临床前研究一致证明了这些FGFs在治疗肥胖、糖尿病、血脂异常和非酒精性脂肪性肝炎(NASH)方面的治疗益处。一些基因工程的FGF19和FGF21类似物具有改善的药效学和药代动力学特性,并已开发并进入临床试验的各个阶段。这些FGF类似物可有效缓解活检证实的NASH患者的肝脂肪变性、脂肪性肝炎和肝纤维化,而其抗糖尿病和抗肥胖作用较轻,在不同的临床试验中差异很大。本文综述了基于fgf治疗肥胖相关代谢并发症的生物制药研究的最新进展,强调了临床实施中的主要挑战,并讨论了克服这些障碍的可能策略。
{"title":"Fibroblast Growth Factor-Based Pharmacotherapies for the Treatment of Obesity-Related Metabolic Complications.","authors":"Leigang Jin,&nbsp;Ranyao Yang,&nbsp;Leiluo Geng,&nbsp;Aimin Xu","doi":"10.1146/annurev-pharmtox-032322-093904","DOIUrl":"https://doi.org/10.1146/annurev-pharmtox-032322-093904","url":null,"abstract":"<p><p>The fibroblast growth factor (FGF) family, which comprises 22 structurally related proteins, plays diverse roles in cell proliferation, differentiation, development, and metabolism. Among them, two classical members (FGF1 and FGF4) and two endocrine members (FGF19 and FGF21) are important regulators of whole-body energy homeostasis, glucose/lipid metabolism, and insulin sensitivity. Preclinical studies have consistently demonstrated the therapeutic benefits of these FGFs for the treatment of obesity, diabetes, dyslipidemia, and nonalcoholic steatohepatitis (NASH). Several genetically engineered FGF19 and FGF21 analogs with improved pharmacodynamic and pharmacokinetic properties have been developed and progressed into various stages of clinical trials. These FGF analogs are effective in alleviating hepatic steatosis, steatohepatitis, and liver fibrosis in biopsy-confirmed NASH patients, whereas their antidiabetic and antiobesity effects are mildand vary greatly in different clinical trials. This review summarizes recent advances in biopharmaceutical development of FGF-based therapies against obesity-related metabolic complications, highlights major challenges in clinical implementation, and discusses possible strategies to overcome these hurdles.</p>","PeriodicalId":8057,"journal":{"name":"Annual review of pharmacology and toxicology","volume":"63 ","pages":"359-382"},"PeriodicalIF":12.5,"publicationDate":"2023-01-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9169482","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 8
期刊
Annual review of pharmacology and toxicology
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1