首页 > 最新文献

Annual review of phytopathology最新文献

英文 中文
The Greening of One Health: Plants, Pathogens, and the Environment. 绿色的健康:植物、病原体与环境。
IF 9.1 1区 农林科学 Q1 PLANT SCIENCES Pub Date : 2024-09-01 Epub Date: 2024-08-22 DOI: 10.1146/annurev-phyto-121423-042102
Karen-Beth G Scholthof

One Health has an aspirational goal of ensuring the health of humans, animals, plants, and the environment through transdisciplinary, collaborative research. At its essence, One Health addresses the human clash with Nature by formulating strategies to repair and restore a (globally) perturbed ecosystem. A more nuanced evaluation of humankind's impact on the environment (Nature, Earth, Gaia) would fully intercalate plants, plant pathogens, and beneficial plant microbes into One Health. Here, several examples point out how plants and plant microbes are keystones of One Health. Meaningful cross-pollination between plant, animal, and human health practitioners can drive discovery and application of innovative tools to address the many complex problems within the One Health framework.

一个健康 "计划的理想目标是通过跨学科合作研究,确保人类、动物、植物和环境的健康。从本质上讲,"同一健康 "通过制定修复和恢复(全球)受干扰生态系统的战略,解决人类与自然的冲突问题。对人类对环境(自然、地球、盖亚)的影响进行更细致的评估,可以将植物、植物病原体和有益的植物微生物充分纳入 "一体健康"。这里有几个例子可以说明植物和植物微生物如何成为 "一体健康 "的基石。植物、动物和人类健康从业者之间有意义的相互促进可以推动创新工具的发现和应用,从而解决 "一体健康 "框架内的许多复杂问题。
{"title":"The Greening of One Health: Plants, Pathogens, and the Environment.","authors":"Karen-Beth G Scholthof","doi":"10.1146/annurev-phyto-121423-042102","DOIUrl":"10.1146/annurev-phyto-121423-042102","url":null,"abstract":"<p><p>One Health has an aspirational goal of ensuring the health of humans, animals, plants, and the environment through transdisciplinary, collaborative research. At its essence, One Health addresses the human clash with Nature by formulating strategies to repair and restore a (globally) perturbed ecosystem. A more nuanced evaluation of humankind's impact on the environment (Nature, Earth, Gaia) would fully intercalate plants, plant pathogens, and beneficial plant microbes into One Health. Here, several examples point out how plants and plant microbes are keystones of One Health. Meaningful cross-pollination between plant, animal, and human health practitioners can drive discovery and application of innovative tools to address the many complex problems within the One Health framework.</p>","PeriodicalId":8251,"journal":{"name":"Annual review of phytopathology","volume":" ","pages":"401-421"},"PeriodicalIF":9.1,"publicationDate":"2024-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141299874","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Comparing Apples and Oranges: Advances in Disease Resistance Breeding of Woody Perennial Fruit Crops. 苹果和橘子的比较:多年生木本果树抗病育种的进展。
IF 9.1 1区 农林科学 Q1 PLANT SCIENCES Pub Date : 2024-09-01 Epub Date: 2024-08-22 DOI: 10.1146/annurev-phyto-021622-120124
Awais Khan, Anže Švara, Nian Wang

Apple and citrus are perennial tree fruit crops that are vital for nutritional security and agricultural economy and to achieve the Sustainable Development Goals of the United Nations. Apple scab and fire blight, along with Huanglongbing, canker, and tristeza virus, stand out as their most notorious diseases and annually destabilize fruit supply. An environmentally sound approach to managing these diseases is improving tree resistance through breeding and biotechnology. Perennial fruit tree germplasm collections are distributed globally and offer untapped potential as sources of resistance. However, long juvenility, specific pollination and flowering habits, and extensive outcrossing hinder apple and citrus breeding. Advances in breeding approaches include trans- and cis-genesis, genome editing, and rapid-cycle breeding, which, in addition to conventional crossbreeding, can all facilitate accelerated integration of resistance into elite germplasm. In addition, the global pool of available sources of resistance can be characterized by the existing genetic mapping and gene expression studies for accurate discovery of associated loci, genes, and markers to efficiently include these sources in breeding efforts. We discuss and propose a multitude of approaches to overcome the challenges of breeding for resistance in woody perennials and outline a technical path to reduce the time required for the ultimate deployment of disease-resistant cultivars.

苹果和柑橘是多年生树果作物,对营养安全和农业经济以及实现联合国可持续发展目标至关重要。苹果疮痂病和火疫病,以及黄龙病、腐烂病和三叶虫病毒是它们最臭名昭著的病害,每年都会破坏水果供应的稳定。通过育种和生物技术提高果树的抗病能力是管理这些病害的一种环保方法。多年生果树种质资源遍布全球,作为抗性来源的潜力尚待开发。然而,苹果和柑橘的幼树期长、特定的授粉和开花习性以及广泛的外交阻碍了它们的育种工作。育种方法的进步包括反式和顺式育种、基因组编辑和快速循环育种,除了传统的杂交育种外,这些方法都能促进抗性加速整合到精英种质中。此外,现有的基因图谱和基因表达研究可对全球现有抗性来源进行定性,以准确发现相关基因座、基因和标记,从而有效地将这些抗性来源纳入育种工作中。我们讨论并提出了克服多年生木本植物抗性育种挑战的多种方法,并概述了缩短抗病栽培品种最终部署所需时间的技术路线。
{"title":"Comparing Apples and Oranges: Advances in Disease Resistance Breeding of Woody Perennial Fruit Crops.","authors":"Awais Khan, Anže Švara, Nian Wang","doi":"10.1146/annurev-phyto-021622-120124","DOIUrl":"10.1146/annurev-phyto-021622-120124","url":null,"abstract":"<p><p>Apple and citrus are perennial tree fruit crops that are vital for nutritional security and agricultural economy and to achieve the Sustainable Development Goals of the United Nations. Apple scab and fire blight, along with Huanglongbing, canker, and tristeza virus, stand out as their most notorious diseases and annually destabilize fruit supply. An environmentally sound approach to managing these diseases is improving tree resistance through breeding and biotechnology. Perennial fruit tree germplasm collections are distributed globally and offer untapped potential as sources of resistance. However, long juvenility, specific pollination and flowering habits, and extensive outcrossing hinder apple and citrus breeding. Advances in breeding approaches include <i>trans</i>- and <i>cis-</i>genesis, genome editing, and rapid-cycle breeding, which, in addition to conventional crossbreeding, can all facilitate accelerated integration of resistance into elite germplasm. In addition, the global pool of available sources of resistance can be characterized by the existing genetic mapping and gene expression studies for accurate discovery of associated loci, genes, and markers to efficiently include these sources in breeding efforts. We discuss and propose a multitude of approaches to overcome the challenges of breeding for resistance in woody perennials and outline a technical path to reduce the time required for the ultimate deployment of disease-resistant cultivars.</p>","PeriodicalId":8251,"journal":{"name":"Annual review of phytopathology","volume":" ","pages":"263-287"},"PeriodicalIF":9.1,"publicationDate":"2024-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141070365","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Developing Predictive Models and Early Warning Systems for Invading Pathogens: Wheat Rusts. 开发入侵病原体的预测模型和预警系统:小麦锈病。
IF 9.1 1区 农林科学 Q1 PLANT SCIENCES Pub Date : 2024-09-01 Epub Date: 2024-08-22 DOI: 10.1146/annurev-phyto-121423-041956
Christopher A Gilligan

Innovations in aerobiological and epidemiological modeling are enabling the development of powerful techniques to infer connectivity networks for transboundary pathogens in ways that were not previously possible. The innovations are supported by improved access to historical and near real-time highly resolved weather data, multi-country disease surveillance data, and enhanced computing power. Using wheat rusts as an exemplar, we introduce a flexible modeling framework to identify characteristic pathways for long-distance spore dispersal within countries and beyond national borders. We show how the models are used for near real-time early warning systems to support smallholder farmers in East Africa and South Asia. Wheat rust pathogens are ideal exemplars because they continue to pose threats to food security, especially in regions of the world where resources for control are limited. The risks are exacerbated by the rapid appearance and spread of new pathogenic strains, prodigious spore production, and long-distance dispersal for transboundary and pandemic spread.

空气生物学和流行病学建模方面的创新使我们能够开发强大的技术,以以前无法实现的方式推断跨境病原体的连接网络。这些创新得益于对历史和近实时高分辨率天气数据、多国疾病监测数据的更好获取,以及计算能力的增强。我们以小麦锈病为例,介绍了一个灵活的建模框架,以确定孢子在国内和国界外长距离传播的特征路径。我们展示了如何将模型用于近实时预警系统,为东非和南亚的小农提供支持。小麦锈病病原体是理想的范例,因为它们继续对粮食安全构成威胁,尤其是在世界上控制资源有限的地区。新的致病菌株的迅速出现和传播、孢子的大量生产以及跨国界和大流行病的远距离传播加剧了这种风险。
{"title":"Developing Predictive Models and Early Warning Systems for Invading Pathogens: Wheat Rusts.","authors":"Christopher A Gilligan","doi":"10.1146/annurev-phyto-121423-041956","DOIUrl":"10.1146/annurev-phyto-121423-041956","url":null,"abstract":"<p><p>Innovations in aerobiological and epidemiological modeling are enabling the development of powerful techniques to infer connectivity networks for transboundary pathogens in ways that were not previously possible. The innovations are supported by improved access to historical and near real-time highly resolved weather data, multi-country disease surveillance data, and enhanced computing power. Using wheat rusts as an exemplar, we introduce a flexible modeling framework to identify characteristic pathways for long-distance spore dispersal within countries and beyond national borders. We show how the models are used for near real-time early warning systems to support smallholder farmers in East Africa and South Asia. Wheat rust pathogens are ideal exemplars because they continue to pose threats to food security, especially in regions of the world where resources for control are limited. The risks are exacerbated by the rapid appearance and spread of new pathogenic strains, prodigious spore production, and long-distance dispersal for transboundary and pandemic spread.</p>","PeriodicalId":8251,"journal":{"name":"Annual review of phytopathology","volume":" ","pages":"217-241"},"PeriodicalIF":9.1,"publicationDate":"2024-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141299870","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Shedding the Light on Powdery Mildew: The Use of Optical Irradiation in Management of the Disease. 白粉病的曙光:在病害管理中使用光学照射。
IF 9.1 1区 农林科学 Q1 PLANT SCIENCES Pub Date : 2024-09-01 Epub Date: 2024-08-22 DOI: 10.1146/annurev-phyto-021622-115201
Aruppillai Suthaparan, Arne Stensvand

Ultraviolet (UV) irradiation below 300 nm may control powdery mildew in numerous crops. Depending on disease pressure, wavelength, and crop growth stage, one to three applications of 100-200 J/m2 per week at night are as effective or better than the best fungicides. Higher doses may harm the plants and reduce yields. Although red light alone or in combination with UV has a suppressive effect on powdery mildew, concomitant or subsequent exposure to blue light or UV-A strongly reduces the efficacy of UV treatments. To be effective, direct exposure of the pathogen/infection sites to UV/red light is important, but there are clear indications for the involvement of induced resistance in the host. Other pathogens and pests are susceptible to UV, but the effective dose may be phytotoxic. Although there are certain limitations, this technology is gradually becoming more used in both protected and open-field commercial production systems.

波长低于 300 纳米的紫外线(UV)照射可控制多种作物的白粉病。根据病害压力、波长和作物生长阶段,每周在夜间使用一到三次 100-200 J/m2 的紫外线照射,其效果与最好的杀真菌剂相当,甚至更好。更高的剂量可能会伤害植物并降低产量。虽然红光单独或与紫外线结合使用对白粉病有抑制作用,但同时或随后照射蓝光或紫外线 A 会大大降低紫外线处理的效果。病原体/感染部位直接暴露在紫外线/红光下才能有效,但有明显迹象表明,宿主的诱导抗性也参与其中。其他病原体和害虫对紫外线也易感,但有效剂量可能会产生植物毒性。虽然有一定的局限性,但这项技术正逐渐被更多地用于保护地和露地商业生产系统。
{"title":"Shedding the Light on Powdery Mildew: The Use of Optical Irradiation in Management of the Disease.","authors":"Aruppillai Suthaparan, Arne Stensvand","doi":"10.1146/annurev-phyto-021622-115201","DOIUrl":"10.1146/annurev-phyto-021622-115201","url":null,"abstract":"<p><p>Ultraviolet (UV) irradiation below 300 nm may control powdery mildew in numerous crops. Depending on disease pressure, wavelength, and crop growth stage, one to three applications of 100-200 J/m2 per week at night are as effective or better than the best fungicides. Higher doses may harm the plants and reduce yields. Although red light alone or in combination with UV has a suppressive effect on powdery mildew, concomitant or subsequent exposure to blue light or UV-A strongly reduces the efficacy of UV treatments. To be effective, direct exposure of the pathogen/infection sites to UV/red light is important, but there are clear indications for the involvement of induced resistance in the host. Other pathogens and pests are susceptible to UV, but the effective dose may be phytotoxic. Although there are certain limitations, this technology is gradually becoming more used in both protected and open-field commercial production systems.</p>","PeriodicalId":8251,"journal":{"name":"Annual review of phytopathology","volume":" ","pages":"289-308"},"PeriodicalIF":9.1,"publicationDate":"2024-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141320437","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Molecular Dialogue During Host Manipulation by the Vascular Wilt Fungus Fusarium oxysporum. 维管束枯萎病真菌 Fusarium oxysporum操纵寄主过程中的分子对话
IF 9.1 1区 农林科学 Q1 PLANT SCIENCES Pub Date : 2024-09-01 Epub Date: 2024-08-22 DOI: 10.1146/annurev-phyto-021722-034823
Vidha Srivastava, Kuntal Patra, Hsuan Pai, Maria Victoria Aguilar-Pontes, Aileen Berasategui, Avinash Kamble, Antonio Di Pietro, Amey Redkar

Vascular wilt fungi are a group of hemibiotrophic phytopathogens that infect diverse crop plants. These pathogens have adapted to thrive in the nutrient-deprived niche of the plant xylem. Identification and functional characterization of effectors and their role in the establishment of compatibility across multiple hosts, suppression of plant defense, host reprogramming, and interaction with surrounding microbes have been studied mainly in model vascular wilt pathogens Fusarium oxysporum and Verticillium dahliae. Comparative analysis of genomes from fungal isolates has accelerated our understanding of genome compartmentalization and its role in effector evolution. Also, advances in recent years have shed light on the cross talk of root-infecting fungi across multiple scales from the cellular to the ecosystem level, covering their interaction with the plant microbiome as well as their interkingdom signaling. This review elaborates on our current understanding of the cross talk between vascular wilt fungi and the host plant, which eventually leads to a specialized lifestyle in the xylem. We particularly focus on recent findings in F. oxysporum, including multihost associations, and how they have contributed to understanding the biology of fungal adaptation to the xylem. In addition, we discuss emerging research areas and highlight open questions and future challenges.

维管束枯萎病真菌是一类感染多种作物的半生物营养型植物病原体。这些病原体适应了在植物木质部营养匮乏的环境中生长。人们主要在维管束枯萎病病原体镰刀菌(Fusarium oxysporum)和大丽轮枝菌(Verticillium dahliae)中研究了效应物的鉴定和功能特征,以及它们在多个宿主间建立兼容性、抑制植物防御、宿主重编程和与周围微生物相互作用中的作用。对真菌分离物基因组的比较分析加速了我们对基因组区隔及其在效应物进化中的作用的理解。此外,近年来的研究进展还揭示了根部感染真菌在从细胞到生态系统等多个尺度上的交叉对话,包括它们与植物微生物组的相互作用以及它们之间的信号传递。这篇综述阐述了我们目前对维管束枯萎病真菌与寄主植物之间交叉对话的理解,这种对话最终导致了木质部中的特殊生活方式。我们特别关注最近在 F. oxysporum(包括多寄主关联)方面的发现,以及这些发现如何有助于理解真菌适应木质部的生物学特性。此外,我们还讨论了新出现的研究领域,并强调了一些悬而未决的问题和未来的挑战。
{"title":"Molecular Dialogue During Host Manipulation by the Vascular Wilt Fungus <i>Fusarium oxysporum</i>.","authors":"Vidha Srivastava, Kuntal Patra, Hsuan Pai, Maria Victoria Aguilar-Pontes, Aileen Berasategui, Avinash Kamble, Antonio Di Pietro, Amey Redkar","doi":"10.1146/annurev-phyto-021722-034823","DOIUrl":"10.1146/annurev-phyto-021722-034823","url":null,"abstract":"<p><p>Vascular wilt fungi are a group of hemibiotrophic phytopathogens that infect diverse crop plants. These pathogens have adapted to thrive in the nutrient-deprived niche of the plant xylem. Identification and functional characterization of effectors and their role in the establishment of compatibility across multiple hosts, suppression of plant defense, host reprogramming, and interaction with surrounding microbes have been studied mainly in model vascular wilt pathogens <i>Fusarium oxysporum</i> and <i>Verticillium dahliae</i>. Comparative analysis of genomes from fungal isolates has accelerated our understanding of genome compartmentalization and its role in effector evolution. Also, advances in recent years have shed light on the cross talk of root-infecting fungi across multiple scales from the cellular to the ecosystem level, covering their interaction with the plant microbiome as well as their interkingdom signaling. This review elaborates on our current understanding of the cross talk between vascular wilt fungi and the host plant, which eventually leads to a specialized lifestyle in the xylem. We particularly focus on recent findings in <i>F. oxysporum</i>, including multihost associations, and how they have contributed to understanding the biology of fungal adaptation to the xylem. In addition, we discuss emerging research areas and highlight open questions and future challenges.</p>","PeriodicalId":8251,"journal":{"name":"Annual review of phytopathology","volume":" ","pages":"97-126"},"PeriodicalIF":9.1,"publicationDate":"2024-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141417524","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Phytopathogens Reprogram Host Alternative mRNA Splicing 植物病原体重编程宿主交替 mRNA 剪接
IF 10.2 1区 农林科学 Q1 PLANT SCIENCES Pub Date : 2024-05-01 DOI: 10.1146/annurev-phyto-121423-041908
Tarek Hewezi
Alternative splicing (AS) is an evolutionarily conserved cellular process in eukaryotes in which multiple messenger RNA (mRNA) transcripts are produced from a single gene. The concept that AS adds to transcriptome complexity and proteome diversity introduces a new perspective for understanding how phytopathogen-induced alterations in host AS cause diseases. Recently, it has been recognized that AS represents an integral component of the plant immune system during parasitic, commensalistic, and symbiotic interactions. Here, I provide an overview of recent progress detailing the reprogramming of plant AS by phytopathogens and the functional implications on disease phenotypes. Additionally, I discuss the vital function of AS of immune receptors in regulating plant immunity and how phytopathogens use effector proteins to target key components of the splicing machinery and exploit alternatively spliced variants of immune regulators to negate defense responses. Finally, the functional association between AS and nonsense-mediated mRNA decay in the context of plant–pathogen interface is recapitulated.
在真核生物中,替代剪接(AS)是一种进化保守的细胞过程,在这一过程中,单个基因会产生多个信使 RNA(mRNA)转录本。AS增加了转录组的复杂性和蛋白质组的多样性,这一概念为理解植物病原体诱导的宿主AS改变如何导致疾病提供了新的视角。最近,人们认识到在寄生、共生和共生相互作用过程中,AS 是植物免疫系统不可或缺的组成部分。在此,我将概述最近的研究进展,详细介绍植物病原体对植物AS的重编程以及对疾病表型的功能影响。此外,我还讨论了免疫受体的AS在调节植物免疫方面的重要功能,以及植物病原体如何利用效应蛋白瞄准剪接机制的关键部件,并利用免疫调节因子的替代剪接变体来否定防御反应。最后,还重述了在植物与病原体相互作用的背景下,AS 与无义介导的 mRNA 衰减之间的功能关联。
{"title":"Phytopathogens Reprogram Host Alternative mRNA Splicing","authors":"Tarek Hewezi","doi":"10.1146/annurev-phyto-121423-041908","DOIUrl":"https://doi.org/10.1146/annurev-phyto-121423-041908","url":null,"abstract":"Alternative splicing (AS) is an evolutionarily conserved cellular process in eukaryotes in which multiple messenger RNA (mRNA) transcripts are produced from a single gene. The concept that AS adds to transcriptome complexity and proteome diversity introduces a new perspective for understanding how phytopathogen-induced alterations in host AS cause diseases. Recently, it has been recognized that AS represents an integral component of the plant immune system during parasitic, commensalistic, and symbiotic interactions. Here, I provide an overview of recent progress detailing the reprogramming of plant AS by phytopathogens and the functional implications on disease phenotypes. Additionally, I discuss the vital function of AS of immune receptors in regulating plant immunity and how phytopathogens use effector proteins to target key components of the splicing machinery and exploit alternatively spliced variants of immune regulators to negate defense responses. Finally, the functional association between AS and nonsense-mediated mRNA decay in the context of plant–pathogen interface is recapitulated.","PeriodicalId":8251,"journal":{"name":"Annual review of phytopathology","volume":"60 1","pages":""},"PeriodicalIF":10.2,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140836373","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Management of Huanglongbing of Citrus: Lessons from São Paulo and Florida 柑橘黄龙病的防治:圣保罗和佛罗里达的经验教训
IF 10.2 1区 农林科学 Q1 PLANT SCIENCES Pub Date : 2024-05-01 DOI: 10.1146/annurev-phyto-121423-041921
James H. Graham, Renato B. Bassanezi, William O. Dawson, Rick Dantzler
São Paulo, Brazil, and Florida, USA, were the two major orange production areas in the world until Huanglongbing (HLB) was discovered in São Paulo in 2004 and Florida in 2005. In the absence of resistant citrus varieties, HLB is the most destructive citrus disease known because of the lack of effective tools to reduce spread of the vector, Diaphorina citri (Asian citrus psyllid), and transmission of the associated pathogen, Candidatus Liberibacter asiaticus. In both countries, a three-pronged management approach was recommended and begun: planting only disease-free nursery trees, effective psyllid control, and removal of all symptomatic trees. In Brazil, these management procedures were continued and improved and resulted in relatively little overall loss of production. In contrast, in Florida the citrus industry has been devastated with annual production reduced by approximately 80%. This review compares and contrasts various cultural and pest management strategies that have been used to reduce infection by the pathogen and increase tolerance of HLB in the main orange-growing regions in the world.
在 2004 年圣保罗和 2005 年佛罗里达发现黄龙病(HLB)之前,巴西圣保罗和美国佛罗里达一直是世界两大柑橘产区。在没有抗病柑橘品种的情况下,黄龙病是已知最具破坏性的柑橘病害,因为缺乏有效的工具来减少病媒亚洲柑橘象皮虫(Diaphorina citri)的传播和相关病原体亚洲柑橘解放杆菌(Candidatus Liberibacter asiaticus)的传播。建议并开始在这两个国家采用三管齐下的管理方法:只种植无病苗木、有效控制烟粉虱、移除所有有症状的树木。在巴西,这些管理程序得到了延续和改进,总体产量损失相对较小。与此相反,佛罗里达州的柑橘产业遭到了毁灭性打击,年产量减少了约 80%。本综述对世界主要柑橘种植区为减少病原体感染和提高对 HLB 的耐受性而采用的各种栽培和病虫害管理策略进行了比较和对比。
{"title":"Management of Huanglongbing of Citrus: Lessons from São Paulo and Florida","authors":"James H. Graham, Renato B. Bassanezi, William O. Dawson, Rick Dantzler","doi":"10.1146/annurev-phyto-121423-041921","DOIUrl":"https://doi.org/10.1146/annurev-phyto-121423-041921","url":null,"abstract":"São Paulo, Brazil, and Florida, USA, were the two major orange production areas in the world until Huanglongbing (HLB) was discovered in São Paulo in 2004 and Florida in 2005. In the absence of resistant citrus varieties, HLB is the most destructive citrus disease known because of the lack of effective tools to reduce spread of the vector, <jats:italic>Diaphorina citri</jats:italic> (Asian citrus psyllid), and transmission of the associated pathogen, <jats:italic>Candidatus</jats:italic> Liberibacter asiaticus. In both countries, a three-pronged management approach was recommended and begun: planting only disease-free nursery trees, effective psyllid control, and removal of all symptomatic trees. In Brazil, these management procedures were continued and improved and resulted in relatively little overall loss of production. In contrast, in Florida the citrus industry has been devastated with annual production reduced by approximately 80%. This review compares and contrasts various cultural and pest management strategies that have been used to reduce infection by the pathogen and increase tolerance of HLB in the main orange-growing regions in the world.","PeriodicalId":8251,"journal":{"name":"Annual review of phytopathology","volume":"8 1","pages":""},"PeriodicalIF":10.2,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140836788","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Re-Envisioning the Plant Disease Triangle by Integration of Host Microbiota and a Pivot in Focus to Health Outcomes 通过整合宿主微生物群和将重点转向健康结果,重新审视植物病害三角关系
IF 10.2 1区 农林科学 Q1 PLANT SCIENCES Pub Date : 2024-04-29 DOI: 10.1146/annurev-phyto-121423-042021
Johan H.J. Leveau
The disease triangle is a structurally simple but conceptually rich model that is used in plant pathology and other fields of study to explain infectious disease as an outcome of the three-way relationship between a host, a pathogen, and their environment. It also serves as a guide for finding solutions to treat, predict, and prevent such diseases. With the omics-driven, evidence-based realization that the abundance and activity of a pathogen are impacted by proximity to and interaction with a diverse multitude of other microorganisms colonizing the same host, the disease triangle evolved into a tetrahedron shape, which features an added fourth dimension representing the host-associated microbiota. Another variant of the disease triangle emerged from the recently formulated pathobiome paradigm, which deviates from the classical “one pathogen” etiology of infectious disease in favor of a scenario in which disease represents a conditional outcome of complex interactions between and among a host, its microbiota (including microbes with pathogenic potential), and the environment. The result is a version of the original disease triangle where “pathogen” is substituted with “microbiota.” Here, as part of a careful and concise review of the origin, history, and usage of the disease triangle, I propose a next step in its evolution, which is to replace the word “disease” in the center of the host–microbiota–environment triad with the word “health.” This triangle highlights health as a desirable outcome (rather than disease as an unwanted state) and as an emergent property of host–microbiota–environment interactions. Applied to the discipline of plant pathology, the health triangle offers an expanded range of targets and approaches for the diagnosis, prediction, restoration, and maintenance of plant health outcomes. Its applications are not restricted to infectious diseases only, and its underlying framework is more inclusive of all microbial contributions to plant well-being, including those by mycorrhizal fungi and nitrogen-fixing bacteria, for which there never was a proper place in the plant disease triangle. The plant health triangle also may have an edge as an education and communication tool to convey and stress the importance of healthy plants and their associated microbiota to a broader public and stakeholdership.
疾病三角是一个结构简单但概念丰富的模型,用于植物病理学和其他研究领域,将传染病解释为宿主、病原体和环境三者之间关系的结果。它也是寻找治疗、预测和预防此类疾病的解决方案的指南。在全息图学的驱动下,人们基于证据认识到,病原体的丰度和活性受到与定植于同一宿主的多种其他微生物的接近和相互作用的影响,疾病三角演变成了四面体形状,其特点是增加了代表宿主相关微生物群的第四个维度。疾病三角的另一个变体产生于最近提出的病原生物群范式,该范式偏离了传统的 "单一病原体 "传染病病因学,转而认为疾病是宿主、微生物群(包括具有致病潜能的微生物)和环境之间复杂相互作用的条件结果。其结果是将 "病原体 "替换为 "微生物群 "的原始疾病三角。在此,作为对疾病三角的起源、历史和用法进行仔细而简明的回顾的一部分,我提出了疾病三角演变的下一步,即用 "健康 "一词取代宿主-微生物群-环境三角中心的 "疾病 "一词。这个三角关系强调健康是一种理想的结果(而不是疾病这种不想要的状态),是宿主-微生物群-环境相互作用的一种新出现的属性。健康三角应用于植物病理学学科,为植物健康结果的诊断、预测、恢复和维护提供了更广泛的目标和方法。它的应用不仅仅局限于传染性疾病,其基本框架也更加包容了所有微生物对植物健康的贡献,包括菌根真菌和固氮细菌的贡献,而植物病害三角中从来没有为它们安排适当的位置。作为一种教育和交流工具,植物健康三角也可以向更广泛的公众和利益相关者传达和强调健康植物及其相关微生物群的重要性。
{"title":"Re-Envisioning the Plant Disease Triangle by Integration of Host Microbiota and a Pivot in Focus to Health Outcomes","authors":"Johan H.J. Leveau","doi":"10.1146/annurev-phyto-121423-042021","DOIUrl":"https://doi.org/10.1146/annurev-phyto-121423-042021","url":null,"abstract":"The disease triangle is a structurally simple but conceptually rich model that is used in plant pathology and other fields of study to explain infectious disease as an outcome of the three-way relationship between a host, a pathogen, and their environment. It also serves as a guide for finding solutions to treat, predict, and prevent such diseases. With the omics-driven, evidence-based realization that the abundance and activity of a pathogen are impacted by proximity to and interaction with a diverse multitude of other microorganisms colonizing the same host, the disease triangle evolved into a tetrahedron shape, which features an added fourth dimension representing the host-associated microbiota. Another variant of the disease triangle emerged from the recently formulated pathobiome paradigm, which deviates from the classical “one pathogen” etiology of infectious disease in favor of a scenario in which disease represents a conditional outcome of complex interactions between and among a host, its microbiota (including microbes with pathogenic potential), and the environment. The result is a version of the original disease triangle where “pathogen” is substituted with “microbiota.” Here, as part of a careful and concise review of the origin, history, and usage of the disease triangle, I propose a next step in its evolution, which is to replace the word “disease” in the center of the host–microbiota–environment triad with the word “health.” This triangle highlights health as a desirable outcome (rather than disease as an unwanted state) and as an emergent property of host–microbiota–environment interactions. Applied to the discipline of plant pathology, the health triangle offers an expanded range of targets and approaches for the diagnosis, prediction, restoration, and maintenance of plant health outcomes. Its applications are not restricted to infectious diseases only, and its underlying framework is more inclusive of all microbial contributions to plant well-being, including those by mycorrhizal fungi and nitrogen-fixing bacteria, for which there never was a proper place in the plant disease triangle. The plant health triangle also may have an edge as an education and communication tool to convey and stress the importance of healthy plants and their associated microbiota to a broader public and stakeholdership.","PeriodicalId":8251,"journal":{"name":"Annual review of phytopathology","volume":"36 1","pages":""},"PeriodicalIF":10.2,"publicationDate":"2024-04-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140836293","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Combined Retrospective-Prospective Cohort Study to Know the Risk of Sensorineural Hearing Loss in Patients of Drug Resistant TB Receiving Anti Tuberculous Treatment (ATT) at Tertiary Care Centre in South Gujarat. 南古吉拉特邦三级医疗中心接受抗结核治疗(ATT)的耐药结核病患者感音神经性听力损失风险的回顾性-前瞻性联合队列研究
IF 0.6 1区 农林科学 Q1 PLANT SCIENCES Pub Date : 2023-12-01 Epub Date: 2023-06-15 DOI: 10.1007/s12070-023-03702-8
Khushi N Bhavsar, Anandkumar V Chaudhari, Jahanvika M Chauhan, Rahulkumar B Patel, Jaymin A Contractor, Khyati D Shamaliya, Pururava J Desai, Prachi P Roy, Hiteshri C Patel

Combined retrospective-prospective cohort study was done to know the risk of sensorineural hearing loss in patients of drug resistant Tuberculosis (TB) receiving Anti Tuberculous Treatment (ATT) at tertiary care centre in South Gujarat. Study was done by using retrospective and prospective data of the patients of drug resistant TB of NCHS who received injectable ATT and referred by department of Respiratory Medicine to ENT department for purpose of hearing evaluation pre and post treatment (Case cohort). Age and sex matched control cohort was also used which includes patients of non-drug resistant TB who were not receiving Injectable ATT. Incidence of SNHL in patients taking ATT for drug resistant tuberculosis in our study was 33.9%. The Relative Risk of SNHL was 14.3%. The Attributable Risk of SNHL (preventable SNHL) was 93%.

在南古吉拉特邦三级保健中心进行了回顾性-前瞻性联合队列研究,以了解接受抗结核治疗(ATT)的耐药结核病(TB)患者感音神经性听力损失的风险。本研究采用NCHS耐药结核病患者的回顾性和前瞻性资料,这些患者接受注射ATT治疗,并由呼吸内科转诊至耳鼻喉科进行治疗前后听力评估(病例队列)。年龄和性别匹配的对照队列包括未接受注射ATT治疗的非耐药结核病患者。在我们的研究中,因耐药结核病而接受ATT治疗的患者SNHL发病率为33.9%。SNHL的相对危险度为14.3%。SNHL(可预防SNHL)的归因风险为93%。
{"title":"Combined Retrospective-Prospective Cohort Study to Know the Risk of Sensorineural Hearing Loss in Patients of Drug Resistant TB Receiving Anti Tuberculous Treatment (ATT) at Tertiary Care Centre in South Gujarat.","authors":"Khushi N Bhavsar, Anandkumar V Chaudhari, Jahanvika M Chauhan, Rahulkumar B Patel, Jaymin A Contractor, Khyati D Shamaliya, Pururava J Desai, Prachi P Roy, Hiteshri C Patel","doi":"10.1007/s12070-023-03702-8","DOIUrl":"10.1007/s12070-023-03702-8","url":null,"abstract":"<p><p>Combined retrospective-prospective cohort study was done to know the risk of sensorineural hearing loss in patients of drug resistant Tuberculosis (TB) receiving Anti Tuberculous Treatment (ATT) at tertiary care centre in South Gujarat. Study was done by using retrospective and prospective data of the patients of drug resistant TB of NCHS who received injectable ATT and referred by department of Respiratory Medicine to ENT department for purpose of hearing evaluation pre and post treatment (Case cohort). Age and sex matched control cohort was also used which includes patients of non-drug resistant TB who were not receiving Injectable ATT. Incidence of SNHL in patients taking ATT for drug resistant tuberculosis in our study was 33.9%. The Relative Risk of SNHL was 14.3%. The Attributable Risk of SNHL (preventable SNHL) was 93%.</p>","PeriodicalId":8251,"journal":{"name":"Annual review of phytopathology","volume":"12 1","pages":"3185-3190"},"PeriodicalIF":0.6,"publicationDate":"2023-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10645687/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"86003618","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Kitaviruses: A Window to Atypical Plant Viruses Causing Nonsystemic Diseases. Kitaviruss:引起非系统疾病的非典型植物病毒的窗口。
IF 10.2 1区 农林科学 Q1 PLANT SCIENCES Pub Date : 2023-09-05 Epub Date: 2023-05-22 DOI: 10.1146/annurev-phyto-021622-121351
Pedro Luis Ramos-González, Gabriella Dias Arena, Aline Daniele Tassi, Camila Chabi-Jesus, Elliot Watanabe Kitajima, Juliana Freitas-Astúa

Kitaviridae is a family of plant-infecting viruses that have multiple positive-sense, single-stranded RNA genomic segments. Kitaviruses are assigned into the genera Cilevirus, Higrevirus, and Blunervirus, mainly on the basis of the diversity of their genomic organization. Cell-to-cell movement of most kitaviruses is provided by the 30K family of proteins or the binary movement block, considered an alternative movement module among plant viruses. Kitaviruses stand out for producing conspicuously unusual locally restricted infections and showing deficient or nonsystemic movement likely resulting from incompatible or suboptimal interactions with their hosts. Transmission of kitaviruses is mediated by mites of many species of the genus Brevipalpus and at least one species of eriophyids. Kitavirus genomes encode numerous orphan open reading frames but RNA-dependent RNA polymerase and the transmembrane helix-containing protein, generically called SP24, typify a close phylogenetic link with arthropod viruses. Kitaviruses infect a large range of host plants and cause diseases of economic concern in crops such as citrus, tomato, passion fruit, tea, and blueberry.

Kitaviridae是一个植物感染病毒家族,具有多个阳性意义的单链RNA基因组片段。Kitavirus主要根据其基因组组织的多样性被分为Cilevirus属、Higrevirus属和Blunervirus属。大多数风筝病毒的细胞间运动是由30K蛋白质家族或二元运动块提供的,二元运动模块被认为是植物病毒中的一种替代运动模块。Kitavirus因产生明显不寻常的局部限制性感染而引人注目,并表现出可能由与宿主的不相容或次优相互作用引起的缺乏或非系统性运动。基塔病毒的传播是由短吻蛛属许多物种的螨虫和至少一种毛藻介导的。Kitavirus基因组编码许多孤儿开放阅读框,但RNA依赖性RNA聚合酶和含有跨膜螺旋的蛋白质,通常称为SP24,代表了与节肢动物病毒的密切系统发育联系。Kitavirus感染大量寄主植物,并在柑橘、番茄、百香果、茶和蓝莓等作物中引起经济关注的疾病。
{"title":"Kitaviruses: A Window to Atypical Plant Viruses Causing Nonsystemic Diseases.","authors":"Pedro Luis Ramos-González,&nbsp;Gabriella Dias Arena,&nbsp;Aline Daniele Tassi,&nbsp;Camila Chabi-Jesus,&nbsp;Elliot Watanabe Kitajima,&nbsp;Juliana Freitas-Astúa","doi":"10.1146/annurev-phyto-021622-121351","DOIUrl":"10.1146/annurev-phyto-021622-121351","url":null,"abstract":"<p><p><i>Kitaviridae</i> is a family of plant-infecting viruses that have multiple positive-sense, single-stranded RNA genomic segments. Kitaviruses are assigned into the genera <i>Cilevirus</i>, <i>Higrevirus</i>, and <i>Blunervirus</i>, mainly on the basis of the diversity of their genomic organization. Cell-to-cell movement of most kitaviruses is provided by the 30K family of proteins or the binary movement block, considered an alternative movement module among plant viruses. Kitaviruses stand out for producing conspicuously unusual locally restricted infections and showing deficient or nonsystemic movement likely resulting from incompatible or suboptimal interactions with their hosts. Transmission of kitaviruses is mediated by mites of many species of the genus <i>Brevipalpus</i> and at least one species of eriophyids. Kitavirus genomes encode numerous orphan open reading frames but RNA-dependent RNA polymerase and the transmembrane helix-containing protein, generically called SP24, typify a close phylogenetic link with arthropod viruses. Kitaviruses infect a large range of host plants and cause diseases of economic concern in crops such as citrus, tomato, passion fruit, tea, and blueberry.</p>","PeriodicalId":8251,"journal":{"name":"Annual review of phytopathology","volume":"61 ","pages":"97-118"},"PeriodicalIF":10.2,"publicationDate":"2023-09-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10148751","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 6
期刊
Annual review of phytopathology
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1