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Antibody Titers in Transfusion Medicine: A Critical Reevaluation of Testing Accuracy, Reliability, and Clinical Use. 输血医学中的抗体滴度:对检测准确性、可靠性和临床应用的关键性重新评估。
IF 4.6 3区 医学 Q1 Health Professions Pub Date : 2023-12-01 DOI: 10.5858/arpa.2022-0248-CP
Matthew S Karafin, Robert A DeSimone, James Dvorak, Ryan A Metcalf, Monica B Pagano, Yara A Park, Joseph Schwartz, Rhona J Souers, Zbigniew M Szczepiorkowski, Lynne Uhl, Glenn Ramsey

Context.—: Substantial variability between different antibody titration methods has been identified since the development and introduction of the uniform procedure in 2008.

Objective.—: To determine whether more recent methods or techniques decrease interlaboratory and intralaboratory variation measured using proficiency testing.

Design.—: Proficiency test data for antibody titration between 2014 and 2018 were obtained from the College of American Pathologists. Interlaboratory and intralaboratory variations were compared by analyzing the distribution of titer results by method and phase, comparing the results against the supplier's quality control titer, and by evaluating the distribution of paired titer results when each laboratory received a sample with the same titer twice.

Results.—: A total of 1337 laboratories participated in the antibody titer proficiency test during the study period. Only 54.1% (5874 of 10 852) of anti-D and 63.4% (3603 of 5680) of anti-A reported responses were within 1 titer of the supplier's intended result. Review of the agreement between laboratories of the same methodology found that 78.4% (3139 of 4004) for anti-A and 89.0% (9655 of 10 852) of laboratory responses for anti-D fell within 1 titer of the mode response. When provided with 2 consecutive samples of the same titer (anti-D titer: 16), 85% (367 of 434) of laboratories using the uniform procedure and 80% (458 of 576) using the other method reported a titer difference of 1 or less.

Conclusions.—: Despite advances, interlaboratory and intralaboratory variance for this assay remains high in comparison with the strong reliance on titer results in clinical practice. There needs to be a reevaluation of the role of this test in clinical decision-making.

上下文。-:自2008年统一程序的开发和引入以来,已经确定了不同抗体滴定方法之间的实质性差异。-:确定使用熟练度测试测量的最新方法或技术是否减少了实验室间和实验室内的差异。-: 2014年至2018年抗体滴定能力测试数据来自美国病理学家学会。通过按方法和相分析滴度结果的分布,将结果与供应商的质量控制滴度进行比较,并通过评估每个实验室两次收到相同滴度的样品时成对滴度结果的分布,比较实验室间和实验室内的差异。-:研究期间共有1337个实验室参与了抗体效价熟练度测试。只有54.1%(10852例中5874例)的抗d和63.4%(5680例中3603例)的抗a报告反应与供应商预期结果在1滴以内。对同一方法实验室间一致性的审查发现,抗a抗体的78.4%(4004例中的3139例)和抗d抗体的89.0%(10852例中的9655例)的实验室反应低于模式反应的1滴度。当提供2个相同滴度(抗- d滴度:16)的连续样品时,使用统一方法的实验室中有85%(434个实验室中有367个)和使用其他方法的实验室中有80%(576个实验室中有458个)报告的滴度差异为1或更小。-:尽管取得了进展,但与临床实践中对滴度结果的强烈依赖相比,该检测的实验室间和实验室内差异仍然很高。有必要重新评估该测试在临床决策中的作用。
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引用次数: 0
Erroneous Patient Tissue Contaminants in 1574 Surgical Pathology Slides: Impact on Diagnostic Error and a Novel Framework for Floater Management. 1574例手术病理切片中错误的患者组织污染物:对诊断错误的影响和漂浮物管理的新框架。
IF 4.6 3区 医学 Q1 Health Professions Pub Date : 2023-12-01 DOI: 10.5858/arpa.2022-0265-OA
Simon Lamothe, Masa Peric, Jonathan N Glickman, Yael K Heher

Context.—: Tissue contaminants on histology slides represent a serious risk of diagnostic error. Despite their pervasive presence, published peer-reviewed criteria defining contaminants are lacking. The absence of a standardized diagnostic workup algorithm for contaminants contributes to variation in management, including investigation and reporting by pathologists.

Objective.—: To study the frequency and type of tissue contaminants on microscopic slides using standardized criteria. Using these data, we propose a taxonomy and algorithm for pathologists on "floater" management, including identification, workup, and reporting, with an eye on patient safety.

Design.—: A retrospective study arm of 1574 histologic glass slides as well as a prospective study arm of 50 slide contamination events was performed. Using these data we propose a structured classification taxonomy and guidelines for the workup and resolution of tissue contamination events.

Results.—: In the retrospective arm of the study, we identified reasonably sized benign tissue contaminants on 52 of 1574 slides (3.3%). We found size to be an important parameter for evaluation, among other visual features including location on the slide, folding, ink, and tissue of origin. The prospective arm of the study suggested that overall, pathologists tend to use similar features when determining management of potentially actionable contaminants. We also report successfully used case-based ancillary testing strategies, including fluorescence in situ hybridization analysis of chromosomes and DNA fingerprinting.

Conclusions.—: Tissue contamination events are underreported and represent a patient safety risk. Use of a reproducible classification taxonomy and a standardized algorithm for contaminant workup, management, and reporting may aid pathologists in understanding and reducing risk.

上下文。-:组织学切片上的组织污染物具有严重的诊断错误风险。尽管污染物无处不在,但目前还缺乏经过同行评审的标准来定义污染物。缺乏标准化的污染物诊断检查算法导致管理上的差异,包括病理学家的调查和报告。-:使用标准化标准研究显微镜载玻片上组织污染物的频率和类型。利用这些数据,我们为病理学家提出了一种“漂浮物”管理的分类和算法,包括识别、检查和报告,同时关注患者的安全。研究人员对1574例组织学玻片进行了回顾性研究,并对50例玻片污染事件进行了前瞻性研究。利用这些数据,我们提出了一种结构化的分类、分类和指导方针,用于组织污染事件的检查和解决。-:在本研究的回顾性研究中,我们在1574张载玻片中的52张(3.3%)上发现了合理大小的良性组织污染物。我们发现尺寸是评估的重要参数,其他视觉特征包括幻灯片上的位置、折叠、墨水和原始组织。该研究的前瞻性研究表明,总的来说,病理学家在确定潜在可操作污染物的管理时倾向于使用类似的特征。我们也成功地报道了基于病例的辅助检测策略,包括染色体的荧光原位杂交分析和DNA指纹图谱。-:组织污染事件未被充分报道,并构成患者安全风险。使用可重复的分类分类法和污染物检查、管理和报告的标准化算法可以帮助病理学家理解和降低风险。
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引用次数: 0
Utilization of NKX3.1, P501S, Prostate-Specific Antigen, and Steroidogenic Factor 1 to Distinguish Malignant Leydig Cell Tumor From Metastatic Prostatic Adenocarcinoma to the Testis. 应用NKX3.1、P501S、前列腺特异性抗原和甾体生成因子1鉴别睾丸转移性前列腺腺癌与恶性间质细胞瘤
IF 4.6 3区 医学 Q1 Health Professions Pub Date : 2023-12-01 DOI: 10.5858/arpa.2022-0424-OA
Eric Erak, Thomas M Ulbright, Jonathan Epstein

Context.—: A recent study demonstrated that NKX3.1-positive staining can uncommonly be seen in testicular Sertoli cell tumors (1 of 4 cases). Also, it was reported that 2 of 3 Leydig cell tumors of the testis showed diffuse cytoplasmic staining for P501S, although it was unclear whether it was specific granular staining that defines true positivity. However, Sertoli cell tumors do not typically pose a diagnostic dilemma with metastatic prostate carcinoma to the testis. In contrast, malignant Leydig cell tumors, which are exceedingly rare, can closely resemble Gleason score 5 + 5 = 10 prostatic adenocarcinoma metastatic to the testis.

Objective.—: To evaluate the expression of prostate markers in malignant Leydig cell tumors and steroidogenic factor 1 (SF-1) in high-grade prostate adenocarcinoma, as no data are currently published on these topics.

Design.—: Fifteen cases of malignant Leydig cell tumor were collected from 2 large genitourinary pathology consult services in the United States from 1991 to 2019.

Results.—: All 15 cases were negative immunohistochemically for NKX3.1, and all 9 with available additional material were negative for prostate-specific antigen and P501S and positive for SF-1. SF-1 was negative immunohistochemically in a tissue microarray with cases of high-grade prostatic adenocarcinoma.

Conclusions.—: The diagnosis of malignant Leydig cell tumor and its distinction from metastatic adenocarcinoma to the testis can be made immunohistochemically on the basis of SF-1 positivity and negativity for NKX3.1.

上下文。最近的一项研究表明,nkx3.1阳性染色在睾丸支持细胞肿瘤中罕见(4例中有1例)。此外,据报道,睾丸3个间质细胞瘤中有2个显示P501S的弥漫细胞质染色,但尚不清楚是否为定义真阳性的特异性颗粒染色。然而,支持细胞瘤通常不会与睾丸转移性前列腺癌形成诊断困境。恶性间质细胞瘤极为罕见,与Gleason评分5 + 5 = 10的睾丸转移前列腺腺癌非常相似。目的:评估恶性间质细胞肿瘤中前列腺标志物的表达和高级别前列腺腺癌中类固醇生成因子1 (SF-1)的表达,目前尚无相关数据发表。-:收集1991 - 2019年美国2家大型泌尿生殖系统病理咨询机构的恶性间质细胞瘤15例。-: 15例患者NKX3.1免疫组化检测均为阴性,9例患者可获得的补充材料均为前列腺特异性抗原和P501S阴性,SF-1阳性。高级别前列腺癌患者的组织芯片免疫组化结果显示SF-1呈阴性。-:根据NKX3.1的SF-1阳性和阴性,可通过免疫组织化学方法诊断睾丸恶性间质细胞瘤并与睾丸转移性腺癌区分。
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引用次数: 0
Updated Salivary Gland Immunohistochemistry: A Review. 最新涎腺免疫组织化学:综述。
IF 4.6 3区 医学 Q1 Health Professions Pub Date : 2023-12-01 DOI: 10.5858/arpa.2022-0461-RA
Mohammed Amer Swid, Liping Li, Erin M Drahnak, Hayden Idom, William Quinones

Context.—: Salivary gland neoplasms are rare lesions in the head and neck (H&N) pathology realm. There are more than 20 malignant and 15 benign salivary gland neoplasms in the 5th edition of the World Health Organization classification of H&N tumors. These neoplasms consist of heterogeneous groups of uncommon diseases that make diagnosis and treatment challenging for the clinical team. Using an algorithmic immunohistochemical approach-defined tumor origin and type has proven to be effective and advantageous. Immunohistochemistry may be used as sort of a "diagnostic looking glass," not as a positive or negative type tool, but as an indispensable complement to a hematoxylin-eosin morphologic pattern-based approach. Furthermore, the understanding of the novel discoveries of the salivary gland gene fusions and the molecular aspects of these tumors makes the process easier and improve the diagnosis as well as treatment aspects. This review reflects our experience with more recent diagnostic antibodies, which include MYB RNA, Pan-TRK, PLAG1, LEF1, and NR4A3. Each of these is linked with a specific type of neoplasm; for example, gene fusions involving the PLAG1 and HMGA2 oncogenes are specific for benign pleomorphic adenomas, and MYB is associated with adenoid cystic carcinoma.

Objective.—: To review these more recent antibodies, which highly enhance salivary gland neoplasm diagnosis.

Data sources.—: The study sources involved literature PubMed searches, including multiple review articles, case reports, selected book chapters, and Geisinger Medical Center cases.

Conclusions.—: Salivary gland tumors are a rare, varied group of lesions in H&N pathology. We need to have continuous readings and revisions of the molecular consequences of these fusion oncoproteins and their subsequent targets, which will eventually lead to the identification of novel driver genes in salivary gland neoplasms.

上下文。-:唾液腺肿瘤是头颈部(H&N)病理领域罕见的病变。在世界卫生组织第5版的H&N肿瘤分类中,恶性唾液腺肿瘤有20多种,良性唾液腺肿瘤有15种。这些肿瘤由不同种类的罕见疾病组成,使得临床团队的诊断和治疗具有挑战性。使用算法免疫组织化学方法确定肿瘤起源和类型已被证明是有效和有利的。免疫组织化学可以作为一种“诊断镜”,不是作为阳性或阴性类型的工具,而是作为苏木精-伊红形态学模式为基础的方法不可或缺的补充。此外,对唾液腺基因融合和这些肿瘤分子方面的新发现的理解使这一过程更容易,并改善了诊断和治疗方面。这篇综述反映了我们在最近的诊断抗体方面的经验,包括MYB RNA、Pan-TRK、PLAG1、LEF1和NR4A3。每一种都与一种特定类型的肿瘤有关;例如,涉及PLAG1和HMGA2癌基因的基因融合是良性多形性腺瘤的特异性基因,而MYB与腺样囊性癌相关。-:回顾这些最近的抗体,高度提高唾液腺肿瘤的诊断。数据源。-:研究来源涉及文献PubMed检索,包括多篇综述文章、病例报告、精选书籍章节和Geisinger医学中心病例。唾液腺肿瘤是H&N病理中一种罕见的、多样的病变。我们需要不断阅读和修订这些融合癌蛋白及其后续靶标的分子后果,这将最终导致唾液腺肿瘤中新的驱动基因的鉴定。
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引用次数: 0
Current Approach to Undifferentiated Neoplasms, With Focus on New Developments and Novel Immunohistochemical Stains. 目前未分化肿瘤的治疗方法,重点是新的进展和新的免疫组织化学染色。
IF 4.6 3区 医学 Q1 Health Professions Pub Date : 2023-12-01 DOI: 10.5858/arpa.2022-0459-RA
William R Borch, Sara E Monaco

Context.—: Workup of the poorly differentiated or undifferentiated tumor remains a significant and challenging entity in the practice of anatomic pathology. Particularly in the setting of small biopsies and limited material, these cases demand a balanced approach that considers the patient's clinical and radiologic presentation, a basic assessment of tumor morphology, a reasonably broad immunohistochemical panel, and diligent preservation of tissue for prognostic and therapeutic studies.

Objective.—: To illustrate some of the new and emerging immunohistochemical markers in the evaluation of tumors with undifferentiated or poorly differentiated morphology, with a focus on the workup in limited tissue samples to raise awareness of the issues involved with the pathologic workup in these challenging tumors.

Data sources.—: A literature review of new ancillary studies that can be applied to cytologic specimens was performed.

Conclusions.—: Knowledge of the patient's history and communication with the patient's clinical team is essential in formulating a differential diagnosis that can appropriately limit the differential diagnosis based on morphology, especially in small specimens. This information, in conjunction with classifying the tumor morphology (eg, epithelioid, spindled, neuroendocrine, basaloid/biphasic, mixed) gives a logical approach to choosing an initial immunohistochemical panel. Fortunately, immunohistochemistry is evolving quickly in the wake of groundbreaking molecular studies to develop new and better markers to further classify these difficult tumors beyond where we traditionally have been able to go.

上下文。在解剖病理学实践中,低分化或未分化肿瘤的检查仍然是一个重要且具有挑战性的实体。特别是在小活检和材料有限的情况下,这些病例需要一个平衡的方法,考虑患者的临床和放射学表现,肿瘤形态的基本评估,合理广泛的免疫组织化学小组,以及为预后和治疗研究而努力保存组织。-:说明一些新的和新兴的免疫组织化学标记物在未分化或低分化形态肿瘤的评估中,重点是在有限的组织样本中进行检查,以提高对这些具有挑战性的肿瘤的病理检查所涉及的问题的认识。数据源。-:对可应用于细胞学标本的新的辅助研究进行了文献综述。-:对患者病史的了解以及与患者临床团队的沟通对于制定鉴别诊断至关重要,可以适当地限制基于形态学的鉴别诊断,特别是在小样本中。这些信息与肿瘤形态分类(如上皮样、纺锤状、神经内分泌、基底样/双相、混合)相结合,为选择初始免疫组化面板提供了一种合乎逻辑的方法。幸运的是,随着突破性的分子研究的发展,免疫组织化学正在迅速发展,以开发新的更好的标记物,进一步分类这些困难的肿瘤,超出了我们传统上能够做到的。
{"title":"Current Approach to Undifferentiated Neoplasms, With Focus on New Developments and Novel Immunohistochemical Stains.","authors":"William R Borch, Sara E Monaco","doi":"10.5858/arpa.2022-0459-RA","DOIUrl":"10.5858/arpa.2022-0459-RA","url":null,"abstract":"<p><strong>Context.—: </strong>Workup of the poorly differentiated or undifferentiated tumor remains a significant and challenging entity in the practice of anatomic pathology. Particularly in the setting of small biopsies and limited material, these cases demand a balanced approach that considers the patient's clinical and radiologic presentation, a basic assessment of tumor morphology, a reasonably broad immunohistochemical panel, and diligent preservation of tissue for prognostic and therapeutic studies.</p><p><strong>Objective.—: </strong>To illustrate some of the new and emerging immunohistochemical markers in the evaluation of tumors with undifferentiated or poorly differentiated morphology, with a focus on the workup in limited tissue samples to raise awareness of the issues involved with the pathologic workup in these challenging tumors.</p><p><strong>Data sources.—: </strong>A literature review of new ancillary studies that can be applied to cytologic specimens was performed.</p><p><strong>Conclusions.—: </strong>Knowledge of the patient's history and communication with the patient's clinical team is essential in formulating a differential diagnosis that can appropriately limit the differential diagnosis based on morphology, especially in small specimens. This information, in conjunction with classifying the tumor morphology (eg, epithelioid, spindled, neuroendocrine, basaloid/biphasic, mixed) gives a logical approach to choosing an initial immunohistochemical panel. Fortunately, immunohistochemistry is evolving quickly in the wake of groundbreaking molecular studies to develop new and better markers to further classify these difficult tumors beyond where we traditionally have been able to go.</p>","PeriodicalId":8305,"journal":{"name":"Archives of pathology & laboratory medicine","volume":null,"pages":null},"PeriodicalIF":4.6,"publicationDate":"2023-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9145565","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Performance Assessment of a Novel Multianalyte Methodology for Celiac Disease Biomarker Detection and Evaluation of the Serology-Alone Criteria for Biopsy-Free Diagnosis. 乳糜泻生物标志物检测的一种新型多分析方法的性能评估和对无活检诊断的血清学单独标准的评估。
IF 4.6 3区 医学 Q1 Health Professions Pub Date : 2023-12-01 DOI: 10.5858/arpa.2022-0385-OA
Camille Leite Novis, Edward Wahl, Eric Camacho, Mary Ann Aure, Michael Mahler, Vijayalakshmi Nandakumar

Context.—: Serology plays a vital role in celiac disease (CD) diagnosis, and the latest European guidelines advocate for biopsy-free diagnoses in patients with ≥10× the upper limit of normal (ULN) of anti-tissue transglutaminase (tTG) immunoglobulin A (IgA) antibodies.

Objective.—: To assess performance characteristics of a novel automated particle-based multianalyte technology (Aptiva) for anti-tTG and anti-deamidated gliadin peptide (DGP) antibody detection as compared to the traditional enzyme-linked immunosorbent assay (QUANTA Lite). Performance characteristics of the ≥10× ULN anti-tTG IgA criteria for serologic diagnosis of CD were also evaluated.

Design.—: Sera samples from 703 patients were tested for anti-tTG IgA, anti-tTG immunoglobulin G (IgG), anti-DGP IgA, and anti-DGP IgG antibodies on both platforms. In total, 127 patients had medical information and were classified as CD-positive (n = 58) and CD-negative (n = 69) based on biopsy results. Clinical performance characteristics were evaluated.

Results.—: Anti-tTG IgA detection showed equal clinical sensitivity and specificity of 91% sensitivity and 99% specificity on both platforms. Anti-tTG IgG resulted in moderate sensitivity of 69% and 72%, but high specificity of 100% and 94% on Aptiva and QUANTA Lite, respectively. Anti-DGP IgG displayed comparable sensitivity of 90% and 81%, and a specificity of 94% and 99%, on Aptiva and QUANTA Lite, respectively. Anti-DGP IgA demonstrated greater sensitivity on QUANTA Lite (83%) than Aptiva (69%) and similar specificities of 97% and 98% on QUANTA Lite and Aptiva, respectively. At ≥10× ULN levels for anti-tTG IgA, Aptiva displayed a sensitivity of 72% and a specificity of 100%, and QUANTA Lite showed a sensitivity of 69% and a specificity of 100%.

Conclusions.—: Aptiva is a reliable method to measure CD biomarkers with reduced hands-on necessity and high-throughput capabilities. This study supports the use of a ≥10× ULN anti-tTG IgA biopsy-free approach for serologic diagnosis of CD.

上下文。-:血清学在乳糜泻(CD)的诊断中起着至关重要的作用,最新的欧洲指南提倡对抗组织转谷氨酰胺酶(tTG)免疫球蛋白a (IgA)抗体的正常上限(ULN)≥10倍的患者进行无活检诊断。-:与传统的酶联免疫吸附测定法(QUANTA Lite)相比,评估一种新型自动颗粒多分析技术(Aptiva)用于抗ttg和抗脱酰胺麦胶蛋白肽(DGP)抗体检测的性能特征。评估≥10× ULN抗ttg IgA血清学诊断CD标准的性能特征。-: 703例患者的血清样本在两个平台上检测抗ttg IgA、抗ttg免疫球蛋白G (IgG)、抗dgp IgA和抗dgp IgG抗体。共有127例患者有医疗信息,根据活检结果分为cd阳性(n = 58)和cd阴性(n = 69)。评估临床表现特征。-: Anti-tTG IgA检测在两个平台上的临床敏感性和特异性相同,灵敏度为91%,特异性为99%。抗ttg IgG对Aptiva和QUANTA Lite的中等敏感性分别为69%和72%,但对Aptiva和QUANTA Lite的特异性分别为100%和94%。抗- dgp IgG在Aptiva和QUANTA Lite上的敏感性分别为90%和81%,特异性分别为94%和99%。Anti-DGP IgA在QUANTA Lite上的敏感性(83%)高于Aptiva(69%),在QUANTA Lite和Aptiva上的特异性分别为97%和98%。在≥10倍ULN水平下,Aptiva检测抗ttg IgA的灵敏度为72%,特异性为100%,QUANTA Lite检测灵敏度为69%,特异性为100%。-: Aptiva是一种可靠的方法来测量CD生物标志物,减少了动手的必要性和高通量能力。本研究支持使用≥10倍ULN抗ttg IgA无活检方法进行CD的血清学诊断。
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引用次数: 0
Graph Convolutional Neural Networks for Histologic Classification of Pancreatic Cancer. 图形卷积神经网络在癌症组织学分类中的应用。
IF 4.6 3区 医学 Q1 Health Professions Pub Date : 2023-11-01 DOI: 10.5858/arpa.2022-0035-OA
Weiyi Wu, Xiaoying Liu, Robert B Hamilton, Arief A Suriawinata, Saeed Hassanpour

Context.—: Pancreatic ductal adenocarcinoma has some of the worst prognostic outcomes among various cancer types. Detection of histologic patterns of pancreatic tumors is essential to predict prognosis and decide the treatment for patients. This histologic classification can have a large degree of variability even among expert pathologists.

Objective.—: To detect aggressive adenocarcinoma and less aggressive pancreatic tumors from nonneoplasm cases using a graph convolutional network-based deep learning model.

Design.—: Our model uses a convolutional neural network to extract detailed information from every small region in a whole slide image. Then, we use a graph architecture to aggregate the extracted features from these regions and their positional information to capture the whole slide-level structure and make the final prediction.

Results.—: We evaluated our model on an independent test set and achieved an F1 score of 0.85 for detecting neoplastic cells and ductal adenocarcinoma, significantly outperforming other baseline methods.

Conclusions.—: If validated in prospective studies, this approach has a great potential to assist pathologists in identifying adenocarcinoma and other types of pancreatic tumors in clinical settings.

上下文。--:在各种癌症类型中,胰腺导管腺癌的预后最差。胰腺肿瘤组织学模式的检测对于预测预后和决定患者的治疗至关重要。即使在专业病理学家中,这种组织学分类也可能有很大程度的可变性。目标。--:使用基于图卷积网络的深度学习模型从非肿瘤病例中检测侵袭性腺癌和侵袭性较低的胰腺肿瘤。设计。--:我们的模型使用卷积神经网络从整个幻灯片图像中的每个小区域提取详细信息。然后,我们使用图架构来聚合从这些区域提取的特征及其位置信息,以捕获整个幻灯片级别的结构并进行最终预测。结果。--:我们在一个独立的测试集上评估了我们的模型,在检测肿瘤细胞和导管腺癌方面获得了0.85的F1分数,显著优于其他基线方法。结论。--:如果在前瞻性研究中得到验证,这种方法有很大的潜力帮助病理学家在临床环境中识别腺癌和其他类型的胰腺肿瘤。
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引用次数: 0
Nondestructive 3D Pathology Image Atlas of Barrett Esophagus With Open-Top Light-Sheet Microscopy. 采用开顶光片显微镜的Barrett食管无损三维病理学图像图谱。
IF 4.6 3区 医学 Q1 Health Professions Pub Date : 2023-10-01 DOI: 10.5858/arpa.2022-0133-OA
Deepti M Reddi, Lindsey A Barner, Wynn Burke, Gan Gao, William M Grady, Jonathan T C Liu

Context.—: Anatomic pathologists render diagnosis on tissue samples sectioned onto glass slides and viewed under a bright-field microscope. This approach is destructive to the sample, which can limit its use for ancillary assays that can inform patient management. Furthermore, the subjective interpretation of a relatively small number of 2D tissue sections per sample contributes to low interobserver agreement among pathologists for the assessment (diagnosis and grading) of various lesions.

Objective.—: To evaluate 3D pathology data sets of thick formalin-fixed Barrett esophagus specimens imaged nondestructively with open-top light-sheet (OTLS) microscopy.

Design.—: Formalin-fixed, paraffin-embedded Barrett esophagus samples (N = 15) were deparaffinized, stained with a fluorescent analog of hematoxylin-eosin, optically cleared, and imaged nondestructively with OTLS microscopy. The OTLS microscopy images were subsequently compared with archived hematoxylin-eosin histology sections from each sample.

Results.—: Barrett esophagus samples, both small endoscopic forceps biopsies and endoscopic mucosal resections, exhibited similar resolvable structures between OTLS microscopy and conventional light microscopy with up to a ×20 objective (×200 overall magnification). The 3D histologic images generated by OTLS microscopy can enable improved discrimination of cribriform and well-formed gland morphologies. In addition, a much larger amount of tissue is visualized with OTLS microscopy, which enables improved assessment of clinical specimens exhibiting high spatial heterogeneity.

Conclusions.—: In esophageal specimens, OTLS microscopy can generate images comparable in quality to conventional light microscopy, with the advantages of providing 3D information for enhanced evaluation of glandular morphologies and enabling much more of the tissue specimen to be visualized nondestructively.

上下文。--:解剖病理学家对切片到载玻片上并在亮视野显微镜下观察的组织样本进行诊断。这种方法对样本具有破坏性,这可能会限制其用于辅助分析,从而为患者管理提供信息。此外,对每个样本相对较少的2D组织切片的主观解释导致病理学家在评估(诊断和分级)各种病变时观察者之间的一致性较低。目标。--:评估厚福尔马林固定的Barrett食管标本的3D病理学数据集,这些标本用开放式光片(OTLS)显微镜无损成像。设计。--:将福尔马林固定、石蜡包埋的Barrett食管样品(N=15)脱蜡,用苏木精-伊红荧光类似物染色,光学清除,并用OTLS显微镜进行无损成像。随后将OTLS显微镜图像与每个样品的存档苏木精-伊红组织学切片进行比较。结果。--:Barrett食管样本,包括小型内窥镜钳活检和内窥镜粘膜切除,在OTLS显微镜和常规光学显微镜之间表现出相似的可分辨结构,物镜高达20倍(×200总放大倍数)。OTLS显微镜生成的3D组织学图像可以提高对筛状和良好形成的腺体形态的辨别能力。此外,OTLS显微镜可以观察到更大量的组织,这使得能够改进对表现出高度空间异质性的临床标本的评估。结论。--:在食道标本中,OTLS显微镜可以生成质量与传统光学显微镜相当的图像,其优点是提供3D信息以增强对腺体形态的评估,并使更多的组织标本能够无损可视化。
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引用次数: 2
Paratesticular Extramedullary Hematopoiesis in Children. 儿童睾丸旁髓质外造血。
IF 4.6 3区 医学 Q1 Health Professions Pub Date : 2023-10-01 DOI: 10.5858/arpa.2022-0135-OA
Elisabetta Kuhn, Letterio Runza, Antonio Di Cesare, Umberto Gianelli

Context.—: Extramedullary hematopoiesis (EMH) is an uncommon occurrence, usually associated with hematologic disorders, but it rarely presents as an isolated finding.

Objective.—: To determine the frequency, immunomorphologic features, and clinicopathologic background of EMH in orchiectomies from pediatric patients.

Design.—: All orchiectomy specimens removed from children from 2008 to 2020 in our institution were retrospectively reviewed. Biopsies and neoplasias were excluded. The EMH diagnosis was rendered when hematopoietic cell precursors were present. Immunohistochemical stainings were performed to characterize the hematopoietic components.

Results.—: Seventy-nine orchiectomies from 77 children (mean age, 5 years; range, 0-17 years) were included in our study. Forty-three patients (55.8%) underwent surgery for testicular atrophy, 30 (39.0%) for torsion, and 4 (5.2%) for intersex conditions. EMH was identified in 6 of 79 orchiectomies (7.6%), all performed for testicular torsion. All patients but one were newborns, and the remaining patient was 15 years old. No patient had evidence of a hematologic disorder. All EMH foci were in a background of reactive changes with a variable extension, either in the epididymis (4 cases) or in the deferens duct (2 cases). Immunostaining confirmed an association of myeloid (myeloperoxidase+) and erythroid precursors (E-cadherin+) in all 6 cases. One case also presented rare megakaryocytes, and one showed benign TdT+ B-cell precursors.

Conclusions.—: To our knowledge, this is the first study that demonstrates EMH as a common finding in orchiectomy samples, especially from newborns. Despite the lack of pathologic potential, it is important to recognize EMH in order to avoid misdiagnosis.

上下文。--:髓外造血(EMH)是一种罕见的疾病,通常与血液系统疾病有关,但很少作为单独的发现。目标。--:确定儿童睾丸切除术中EMH的频率、免疫形态学特征和临床病理背景。设计。--:我们对2008年至2020年在我们机构从儿童身上取出的所有睾丸切除标本进行了回顾性审查。排除了活检和肿瘤。当存在造血细胞前体时,诊断为EMH。进行免疫组织化学染色以表征造血成分。结果。--:我们的研究包括77名儿童(平均年龄5岁;范围0-17岁)的79例睾丸切除术。43名患者(55.8%)接受了睾丸萎缩手术,30名患者(39.0%)接受了扭转手术,4名患者(5.2%)接受了双性疾病手术。79例睾丸切除术中有6例(7.6%)发现EMH,均为睾丸扭转。除一名患者外,其余患者均为新生儿,其余患者为15岁。没有任何患者有血液系统疾病的证据。所有EMH病灶均在附睾(4例)或输精管(2例)发生具有可变延伸的反应性变化。免疫染色证实,在所有6例病例中,骨髓细胞(髓过氧化物酶+)和红系前体(E-钙粘蛋白+)存在关联。一例还表现出罕见的巨核细胞,一例表现出良性TdT+B细胞前体。结论。--:据我们所知,这是第一项证明EMH在睾丸切除术样本中常见的研究,尤其是在新生儿中。尽管缺乏病理潜能,但为了避免误诊,识别EMH是很重要的。
{"title":"Paratesticular Extramedullary Hematopoiesis in Children.","authors":"Elisabetta Kuhn,&nbsp;Letterio Runza,&nbsp;Antonio Di Cesare,&nbsp;Umberto Gianelli","doi":"10.5858/arpa.2022-0135-OA","DOIUrl":"10.5858/arpa.2022-0135-OA","url":null,"abstract":"<p><strong>Context.—: </strong>Extramedullary hematopoiesis (EMH) is an uncommon occurrence, usually associated with hematologic disorders, but it rarely presents as an isolated finding.</p><p><strong>Objective.—: </strong>To determine the frequency, immunomorphologic features, and clinicopathologic background of EMH in orchiectomies from pediatric patients.</p><p><strong>Design.—: </strong>All orchiectomy specimens removed from children from 2008 to 2020 in our institution were retrospectively reviewed. Biopsies and neoplasias were excluded. The EMH diagnosis was rendered when hematopoietic cell precursors were present. Immunohistochemical stainings were performed to characterize the hematopoietic components.</p><p><strong>Results.—: </strong>Seventy-nine orchiectomies from 77 children (mean age, 5 years; range, 0-17 years) were included in our study. Forty-three patients (55.8%) underwent surgery for testicular atrophy, 30 (39.0%) for torsion, and 4 (5.2%) for intersex conditions. EMH was identified in 6 of 79 orchiectomies (7.6%), all performed for testicular torsion. All patients but one were newborns, and the remaining patient was 15 years old. No patient had evidence of a hematologic disorder. All EMH foci were in a background of reactive changes with a variable extension, either in the epididymis (4 cases) or in the deferens duct (2 cases). Immunostaining confirmed an association of myeloid (myeloperoxidase+) and erythroid precursors (E-cadherin+) in all 6 cases. One case also presented rare megakaryocytes, and one showed benign TdT+ B-cell precursors.</p><p><strong>Conclusions.—: </strong>To our knowledge, this is the first study that demonstrates EMH as a common finding in orchiectomy samples, especially from newborns. Despite the lack of pathologic potential, it is important to recognize EMH in order to avoid misdiagnosis.</p>","PeriodicalId":8305,"journal":{"name":"Archives of pathology & laboratory medicine","volume":null,"pages":null},"PeriodicalIF":4.6,"publicationDate":"2023-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10533194","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Risk Estimation of Severe COVID-19 Based on Initial Biomarker Assessment Across Racial and Ethnic Groups. 基于种族和民族群体的初始生物标志物评估的严重新冠肺炎风险评估。
IF 4.6 3区 医学 Q1 Health Professions Pub Date : 2023-10-01 DOI: 10.5858/arpa.2023-0039-SA
Martin H Kroll, Caixia Bi, Ann E Salm, James Szymanski, D Yitzchak Goldstein, Lucia R Wolgast, Gregory Rosenblatt, Amy S Fox, Hema Kapoor

Context.—: Disease courses in COVID-19 patients vary widely. Prediction of disease severity on initial diagnosis would aid appropriate therapy, but few studies include data from initial diagnosis.

Objective.—: To develop predictive models of COVID-19 severity based on demographic, clinical, and laboratory data collected at initial patient contact after diagnosis of COVID-19.

Design.—: We studied demographic data and clinical laboratory biomarkers at time of diagnosis, using backward logistic regression modeling to determine severe and mild outcomes. We used deidentified data from 14 147 patients who were diagnosed with COVID-19 by polymerase chain reaction SARS-CoV-2 testing at Montefiore Health System, from March 2020 to September 2021. We generated models predicting severe disease (death or more than 90 hospital days) versus mild disease (alive and fewer than 2 hospital days), starting with 58 variables, by backward stepwise logistic regression.

Results.—: Of the 14 147 patients, including Whites, Blacks, and Hispanics, 2546 (18%) patients had severe outcomes and 3395 (24%) had mild outcomes. The final number of patients per model varied from 445 to 755 because not all patients had all available variables. Four models (inclusive, receiver operating characteristic, specific, and sensitive) were identified as proficient in predicting patient outcomes. The parameters that remained in all models were age, albumin, diastolic blood pressure, ferritin, lactic dehydrogenase, socioeconomic status, procalcitonin, B-type natriuretic peptide, and platelet count.

Conclusions.—: These findings suggest that the biomarkers found within the specific and sensitive models would be most useful to health care providers on their initial severity evaluation of COVID-19.

上下文。--:新冠肺炎患者的病程差异很大。在最初诊断时预测疾病的严重程度将有助于适当的治疗,但很少有研究包括最初诊断的数据。目标。--:根据诊断为新冠肺炎后首次接触患者时收集的人口统计学、临床和实验室数据,开发COVID-19]严重程度的预测模型。设计。-:我们研究了诊断时的人口统计学数据和临床实验室生物标志物,使用后向逻辑回归模型确定严重和轻度结果。我们使用了来自14 2020年3月至2021年9月,在蒙蒂菲奥里卫生系统通过聚合酶链式反应SARS-CoV-2检测确诊为新冠肺炎的147名患者。我们通过向后逐步逻辑回归,从58个变量开始,生成了预测严重疾病(死亡或90天以上住院)与轻度疾病(存活且2天以下住院)的模型。结果。--:14个 147名患者,包括白人、黑人和西班牙裔,2546名(18%)患者有严重后果,3395名(24%)患者有轻微后果。每个模型的最终患者数量从445到755不等,因为并非所有患者都有所有可用的变量。四个模型(包括受试者操作特征、特异性和敏感性)被确定为精通预测患者结果。所有模型中保留的参数包括年龄、白蛋白、舒张压、铁蛋白、乳酸脱氢酶、社会经济状况、降钙素原、B型钠尿肽和血小板计数。结论。--:这些发现表明,在特定和敏感模型中发现的生物标志物将对医疗保健提供者对新冠肺炎的初始严重性评估最有用。
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引用次数: 0
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Archives of pathology & laboratory medicine
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