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Approaches to discovering drugs that regulate E3 ubiquitin ligases. 发现调节E3泛素连接酶的药物的方法。
Pub Date : 2008-01-01 DOI: 10.1007/2789_2008_107
J Huang, L Tsvetkov, K Qu, S Daniel-Issakani, D G Payan

The ubiquitin-proteasome system (UPS) plays an essential role in a wide variety of cell regulatory signaling pathways. The clinical effectiveness of the proteasome inhibitor Velcade in the treatment of several human cancers underscores the importance of the UPS as a novel target area for pharmaceutical intervention. E3 ubiquitin ligases are key enzyme complexes that regulate and determine the ubiquitination of specific substrates, whose abnormal regulation has been implicated in multiple disease phenotypes. Targeting a selective E3 ligase may allow specific manipulation of distinct pathways and eventually lead to a better therapeutic index with reduced nonspecific side effects. Here, we aim to discuss the challenges of interfering with small molecules in this target class, as well as current strategies and progress in E3 ligase drug discovery.

泛素-蛋白酶体系统(UPS)在多种细胞调控信号通路中起着重要作用。蛋白酶体抑制剂Velcade在治疗几种人类癌症中的临床效果强调了UPS作为药物干预新靶点的重要性。E3泛素连接酶是调节和决定特定底物泛素化的关键酶复合物,其异常调节与多种疾病表型有关。靶向选择性E3连接酶可能允许对不同途径进行特异性操作,并最终导致更好的治疗指数和减少非特异性副作用。在这里,我们的目的是讨论在这类靶标中干扰小分子的挑战,以及E3连接酶药物发现的当前策略和进展。
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引用次数: 2
Inhibiting Hdm2 and ubiquitin-activating enzyme: targeting the ubiquitin conjugating system in cancer. 抑制Hdm2和泛素活化酶:靶向泛素偶联系统在癌症中的作用。
Pub Date : 2008-01-01 DOI: 10.1007/2789_2008_108
A M Weissman, Y Yang, J Kitagaki, C A Sasiela, J A Beutler, B R O'Keefe

The ubiquitin conjugating system represents a rich source of potential molecular targets for cancer and other diseases. One target of great interest is the RING finger ubiquitin ligase (E3) Hdm2/Mdm2, which is frequently overexpressed in cancer and is a critical E3 for the tumor suppressor p53. For those 50% of tumors that express wild-type p53, agents that inhibit Hdm2 have great potential clinical utility. We summarize our ongoing efforts to identify inhibitors of Hdm2 E3 activity by high-throughput screening of both defined small molecules and natural product extracts. Employing a strategy using both enzymatic and cell-based assays, we have identified inhibitors that block the E3 activity of Hdm2, activate a p53 response, preferentially kill p53-expressing cells, and have the capacity to differentially cause death of transformed cells. Therefore, screening for inhibitors of Hdm2 ubiquitin ligase activity through in vitro assays represents a powerful means of identifying molecules that activate p53 in cancer cells to induce apoptosis. We also discuss the potential of inhibitors of ubiquitin-activating enzyme (E1) that were discovered during these screens. E1 inhibitors may similarly serve as the basis for novel therapeutics. Additionally, they represent unique tools for providing new insights into the ubiquitin conjugating system.

泛素偶联系统为癌症和其他疾病的潜在分子靶标提供了丰富的来源。一个非常有趣的靶标是无名指泛素连接酶(E3) Hdm2/Mdm2,它在癌症中经常过度表达,是肿瘤抑制因子p53的关键E3。对于50%表达野生型p53的肿瘤,抑制Hdm2的药物具有巨大的潜在临床应用价值。我们总结了通过高通量筛选确定的小分子和天然产物提取物来鉴定Hdm2 E3活性抑制剂的持续努力。采用酶和基于细胞的检测策略,我们已经确定了阻断Hdm2 E3活性的抑制剂,激活p53反应,优先杀死表达p53的细胞,并具有导致转化细胞不同程度死亡的能力。因此,通过体外实验筛选Hdm2泛素连接酶活性抑制剂是鉴定激活癌细胞p53诱导细胞凋亡分子的有力手段。我们还讨论了在这些筛选过程中发现的泛素活化酶(E1)抑制剂的潜力。E1抑制剂同样可以作为新疗法的基础。此外,它们代表了对泛素偶联系统提供新见解的独特工具。
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引用次数: 12
Ubiquitination of Myc: proteasomal degradation and beyond. Myc的泛素化:蛋白酶体降解及其他。
Pub Date : 2008-01-01 DOI: 10.1007/2789_2008_103
J Müller, M Eilers

The level of Myc proteins is a critical determinant of cellular proliferation and apoptosis. Ubiquitination of Myc plays a key role in controlling protein levels by stimulating proteasomal degradation of the protein. Some experiments suggest that ubiquitination may also regulate Myc function in addition to turnover. This review attempts to summarize current knowledge about this field.

Myc蛋白水平是细胞增殖和凋亡的关键决定因素。Myc的泛素化通过刺激蛋白质的蛋白酶体降解在控制蛋白质水平方面起关键作用。一些实验表明,泛素化可能也调节Myc的功能,除了周转。这篇综述试图总结当前关于这一领域的知识。
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引用次数: 22
Transcriptional control and the ubiquitin-proteasome system. 转录控制与泛素-蛋白酶体系统。
Pub Date : 2008-01-01 DOI: 10.1007/2789_2008_102
A. Leung, F. Geng, A. Daulny, G. Collins, P. Guzzardo, W. Tansey
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引用次数: 16
Organocatalysis. Berlin, April 2007. Preface. Organocatalysis。柏林,2007年4月。前言。
Manfred T Reetz, Benjamin List, Stefan Jaroch, Hilmar Weinmann
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引用次数: 0
Progestins and the mammary gland. From basic science to clinical applications. Preface. 孕激素和乳腺。从基础科学到临床应用。前言。
Orla M Conneely, Christiane Otto
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引用次数: 0
Minimally invasive biomarkers for therapy monitoring. 用于治疗监测的微创生物标志物。
Pub Date : 2007-01-01 DOI: 10.1007/2789_2008_093
P McSheehy, P Allegrini, S Ametaby, M Becquet, T Ebenhan, M Honer, S Ferretti, H Lane, P Schubiger, C Schnell, M Stumm, J Wood

Development of new drugs and optimal application of the drugs currently in use in clinical chemotherapy requires the application of biomarkers. Ideally, these biomarkers would stratify patients so that only those patients likely to respond to a particular therapy receive that therapy. However, that is not always feasible, and an alternative is to make use of early response biomarkers to determine the responding population. In this paper, a number of generic (i.e. not necessarily specific to the action mechanism of the compound) early-response biomarkers are discussed and compared in different models and with three compounds with quite different mechanisms of action: a VEGF-R inhibitor (PTK787), an mTOR inhibitor (RAD001) and a microtubule stabiliser (EPO906). The methods include noninvasive DCE-MRI and PET imaging for measuring tumour vascularity, metabolism and proliferation, as well as the minimally invasive WIN method for measuring tumour interstitial pressure (IFP). The data show that drug-induced changes in IFP (delta IFP) involve mechanism-dependent changes in the tumour vascular architecture, and that delta IFP may be considered a universal generic early-response marker of tumour response to therapy.

新药物的开发和现有药物在临床化疗中的优化应用都需要生物标志物的应用。理想情况下,这些生物标记物将对患者进行分层,以便只有那些可能对特定治疗有反应的患者接受该治疗。然而,这并不总是可行的,另一种选择是利用早期反应生物标志物来确定反应人群。在本文中,讨论了一些通用的(即不一定特定于化合物的作用机制)早期反应生物标志物,并在不同的模型中与三种具有完全不同作用机制的化合物进行了比较:VEGF-R抑制剂(PTK787), mTOR抑制剂(RAD001)和微管稳定剂(EPO906)。方法包括测量肿瘤血管、代谢和增殖的无创DCE-MRI和PET成像,以及测量肿瘤间质压力(IFP)的微创WIN法。数据显示,药物诱导的IFP变化(δ IFP)涉及肿瘤血管结构的机制依赖性变化,δ IFP可能被认为是肿瘤对治疗反应的通用早期反应标志物。
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引用次数: 5
The role of diacylglycerol kinases in T cell anergy. 二酰甘油激酶在T细胞能量中的作用。
Pub Date : 2007-01-01 DOI: 10.1007/2789_2007_073
X. Zhong, B. Olenchock, G. Koretzky
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引用次数: 8
Systems biology of T cell activation. T细胞活化的系统生物学。
J A Lindquist, B Schraven

T lymphocytes are central players in the adaptive immune response to pathogens. Cytotoxic T cells are able to identify and eliminate virally infected cells, while helper T cells support B lymphocyte-dependent antibody production as well as produce the cytokines that will determine whether a cell- or antibody-mediated immune response is required. The activation of T cells by pathogens is a complex process requiring multiple tightly regulated signaling pathways. Defects within this network, however, can cause severe and chronic disorders such as autoimmunity. Therefore, improving our understanding of how T cells discriminate between antigens and how these signals are organized to yield distinct immune responses is of importance as this may lead to the identification of novel drug targets and better therapeutic strategies.

T淋巴细胞在对病原体的适应性免疫反应中起着核心作用。细胞毒性T细胞能够识别和消除病毒感染的细胞,而辅助性T细胞支持B淋巴细胞依赖性抗体的产生,并产生细胞因子,这将决定是否需要细胞或抗体介导的免疫反应。T细胞被病原体激活是一个复杂的过程,需要多种严格调控的信号通路。然而,该网络中的缺陷可引起严重和慢性疾病,如自身免疫。因此,提高我们对T细胞如何区分抗原以及这些信号如何组织以产生不同免疫反应的理解是很重要的,因为这可能导致识别新的药物靶点和更好的治疗策略。
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引用次数: 0
Solving the IRAK-4 enigma: application of kinase-dead knock-in mice. 解决IRAK-4之谜:激酶死亡敲入小鼠的应用。
M Koziczak-Holbro, C Joyce, A Glück, B Kinzel, M Müller, H Gram

Interleukin-1 receptor-associated kinase (IRAK-4) is an essential component of the signal transduction complex downstream of the interleukin (IL)-1- and Toll-like receptors. Though regarded as the first kinase in the signaling cascade, the role of IRAK-4 kinase activity versus its scaffold function has been controversial. In order to investigate the role of IRAK-4 kinase function in vivo, we generated "knock-in" mice where the wild-type IRAK-4 gene is replaced with a mutant gene encoding kinase-deficient IRAK-4 protein (IRAK-4 KD). IRAK-4 kinase is rendered inactive by mutating the conserved lysine residues in the ATP pocket essential for coordinating ATP. Analyses of embryonic fibroblasts and macrophages obtained from IRAK-4 KD mice demonstrated lack of cellular responsiveness to stimulation with IL-1beta or Toll-like receptor 4 (TLR4) and TLR7 agonists. IRAK-4 KD cells were severely impaired in NF-kappaB, JNK, and p38 activation in response to IL-1beta or TLR7 ligand. In addition, activation of JNK and p38 was affected in lipopolysaccharide (LPS)-stimulated IRAK-4 KD macrophages. As a consequence, IL-1 receptor/TLR4/TLR7-mediated production of cytokines and chemokines was largely absent in these cells. Additionally, microarray analysis identified IL-1beta response genes and revealed that the induction of IL-1beta-responsive mRNAs is largely ablated in IRAK-4 KD cells. In summary, our results suggest that IRAK-4 kinase activity plays a critical role in IL-1R-, TLR4-, and TLR7-mediated induction of inflammatory responses.

白细胞介素-1受体相关激酶(IRAK-4)是白细胞介素-1和toll样受体下游信号转导复合体的重要组成部分。虽然IRAK-4激酶被认为是信号级联中的第一个激酶,但其活性与其支架功能的作用一直存在争议。为了在体内研究IRAK-4激酶功能的作用,我们制造了“敲入”小鼠,其中野生型IRAK-4基因被编码激酶缺陷IRAK-4蛋白(IRAK-4 KD)的突变基因取代。IRAK-4激酶通过突变ATP口袋中协调ATP所必需的保守赖氨酸残基而失去活性。从IRAK-4 KD小鼠中获得的胚胎成纤维细胞和巨噬细胞分析表明,细胞对il -1 β或toll样受体4 (TLR4)和TLR7激动剂的刺激缺乏反应性。IRAK-4 KD细胞在il -1 β或TLR7配体的作用下,NF-kappaB、JNK和p38的激活严重受损。此外,脂多糖(LPS)刺激的IRAK-4 KD巨噬细胞中JNK和p38的激活受到影响。因此,在这些细胞中,IL-1受体/TLR4/ tlr7介导的细胞因子和趋化因子的产生基本缺失。此外,微阵列分析鉴定了il -1 β应答基因,并显示在IRAK-4 KD细胞中il -1 β应答mrna的诱导在很大程度上被消除。总之,我们的研究结果表明,IRAK-4激酶活性在IL-1R-、TLR4-和tlr7介导的炎症反应诱导中起着关键作用。
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Ernst Schering Foundation symposium proceedings
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