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[Extracellular vesicles for diagnosis and therapy of gliomas: problems and opportunities]. 细胞外囊泡用于胶质瘤的诊断和治疗:问题和机遇。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-12-01 DOI: 10.18097/PBMC20226806419
A A Filin, A A Chernysheva, G V Pavlova, V B Loshhenov, O I Gurina

Glioblastoma is a primary brain tumor and one of the most aggressive malignant neoplasms. The prognosis remains poor with a short survival period after diagnosis even in the case of timely detection and early treatment with the use of advanced chemotherapy, radiation therapy and surgical treatment. In this regard, the research of the main pathogenetic links in the glioblastoma development continues. The current focus is on studying the molecular characteristics of tumours, including the analysis of extracellular vesicles, which play an essential role in intercellular communication processes. In this review, in order to provide up-to-date information on the role of extracellular vesicles in the diagnosis and therapy of gliomas, the analysis of the achieved results of Russian and foreign research related to this area has been carried out. The main goal of this review is to describe the features of extracellular vesicles as the containers and glioma marker transporters, as well as nucleic acids used in diagnosis and therapy.

胶质母细胞瘤是一种原发性脑肿瘤,是最具侵袭性的恶性肿瘤之一。即使在及时发现和早期治疗的情况下,采用先进的化疗、放疗和手术治疗,诊断后预后仍较差,生存期短。在这方面,对胶质母细胞瘤发展的主要发病环节的研究仍在继续。目前的重点是研究肿瘤的分子特征,包括分析在细胞间通讯过程中起重要作用的细胞外囊泡。为了提供细胞外囊泡在胶质瘤诊断和治疗中的作用的最新信息,本文对国内外在这一领域的研究成果进行了分析。本文综述了细胞外囊泡作为胶质瘤的载体和标志物转运体的特点,以及在胶质瘤诊断和治疗中的应用。
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引用次数: 0
[Characterization and biological activity of new 4-oxo-1,4-dihydrocinnoline-based inhibitors of the tyrosine phosphatase PTP1B and TCPTP]. [基于4-氧-1,4-二氢肉桂碱的酪氨酸磷酸酶PTP1B和TCPTP抑制剂的表征和生物活性]。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-12-01 DOI: 10.18097/PBMC20226806427
K V Derkach, I O Zakharova, A A Bakhtyukov, V N Sorokoumov, V S Kuznetsova, A O Shpakov

Functional disorders in obesity are largely due to a decrease in tissue sensitivity to insulin and leptin. One of the ways to restore it is inhibition of protein phosphotyrosine phosphatase 1B (PTP1B) and T-cell protein phosphotyrosine phosphatase (TCPTP), negative regulators of the insulin and leptin signaling. Despite progress in the development of inhibitors of these phosphatases, commercial preparations based on them have not been developed yet, and the mechanisms of action are poorly understood. The aim of the work was to study the effect of new derivatives of 4-oxo-1,4-dihydrocinnoline (PI04, PI06, PI07) on the activity of PTP1B and TCPTP, as well as to study the effect of their five-day administration (i.p., 10 mg/kg/day) to Wistar rats with diet-induced obesity on body weight and fat, metabolic and hormonal parameters, and gene expression of phosphatase and insulin and leptin receptors in the liver. It has been shown that PI04 is a mild, low selective inhibitor of both phosphatases (PTP1B, IC50=3.42(2.60-4.51) μM; TCPTP, IC50=4.16(3.49-4.95) μM), while PI06 and PI07 preferentially inhibit PTP1B (IC50=3.55 (2.63-4.78) μM) and TCPTP (IC50=1.45(1.18-1.78) μM), respectively. PI04 significantly reduced food intake, body weight and fat, attenuated hyperglycemia, normalized glucose tolerance, basal and glucose-stimulated levels of insulin and leptin, and insulin resistance index. Despite the anorexigenic effect, PI06 and PI07 were less effective, having little effect on glucose homeostasis and insulin sensitivity. PI04 significantly increased the expression of the PTP1B and TCPTP genes and decreased the expression of the insulin and leptin receptor genes. PI06 and PI07 had little effect on these indicators. Thus, PI04, the inhibitor of PTP1B and TCPTP phosphatases, restored metabolic and hormonal parameters in obese rats with greater efficiency than inhibitors of PTP1B (PI06) and TCPTP (PI07). This indicates the prospect of creating mixed PTP1B/TCPTP inhibitors for correction of metabolic disorders.

肥胖的功能障碍主要是由于组织对胰岛素和瘦素的敏感性降低。恢复的方法之一是抑制蛋白磷酸酪氨酸磷酸酶1B (PTP1B)和t细胞蛋白磷酸酪氨酸磷酸酶(TCPTP),胰岛素和瘦素信号的负调节因子。尽管这些磷酸酶抑制剂的开发取得了进展,但基于它们的商业制剂尚未开发出来,其作用机制也知之甚少。本研究旨在研究4-氧-1,4-二氢喹啉新衍生物(PI04、PI06、PI07)对PTP1B和TCPTP活性的影响,并研究其对饮食性肥胖Wistar大鼠体重和脂肪、代谢和激素参数、肝脏中磷酸酶、胰岛素和瘦素受体基因表达的影响(每日10 mg/kg/d)。PI04是两种磷酸酶(PTP1B, IC50=3.42(2.60-4.51) μM;TCPTP, IC50=4.16(3.49 ~ 4.95) μM), PI06和PI07分别优先抑制PTP1B (IC50=3.55 (2.63 ~ 4.78) μM)和TCPTP (IC50=1.45(1.18 ~ 1.78) μM)。PI04显著减少食物摄入量,体重和脂肪,减轻高血糖,葡萄糖耐量正常化,基础和葡萄糖刺激的胰岛素和瘦素水平,以及胰岛素抵抗指数。尽管有厌氧性作用,PI06和PI07的效果较差,对葡萄糖稳态和胰岛素敏感性的影响很小。PI04显著增加PTP1B和TCPTP基因的表达,降低胰岛素和瘦素受体基因的表达。PI06和PI07对这些指标影响不大。因此,PTP1B和TCPTP磷酸酶抑制剂PI04比PTP1B (PI06)和TCPTP (PI07)抑制剂更有效地恢复肥胖大鼠的代谢和激素参数。这预示着创造混合PTP1B/TCPTP抑制剂用于纠正代谢紊乱的前景。
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引用次数: 0
[Molecular basis of biological activity of polysaccharides in COVID-19 associated conditions]. [多糖在COVID-19相关条件下生物活性的分子基础]。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-12-01 DOI: 10.18097/PBMC20226806403
E A Generalov, E Yu Simonenko, N G Kulchenko, L V Yakovenko

The review considers the main molecular biological features of the COVID-19 causative agent, the SARS-CoV-2 virus: life cycle, viral cell penetration strategies, interactions of viral proteins with human proteins, cytopathic effects. We also analyze pathological conditions that occur both during the course of the COVID-19 disease and after virus elimination. A brief review of the biological activities of polysaccharides isolated from various sources is given, and possible molecular biological mechanisms of these activities are considered. Data analysis shows that polysaccharides are a class of biological molecules with wide potential for use in the treatment of both acute conditions in COVID-19 and post-COVID syndrome.

本文综述了COVID-19病原体SARS-CoV-2病毒的主要分子生物学特征:生命周期、病毒细胞渗透策略、病毒蛋白与人蛋白的相互作用、细胞病变效应。我们还分析了在COVID-19疾病过程中和病毒消除后发生的病理情况。本文综述了从不同来源分离的多糖的生物活性,并对其可能的分子生物学机制进行了探讨。数据分析表明,多糖是一类具有广泛潜力的生物分子,可用于治疗COVID-19急性病症和COVID-19后综合征。
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引用次数: 1
[Acetylation, methylation, and ubiquitination of proteins in experimental ischemic stroke in mice: a bioinformatics analysis]. [乙酰化,甲基化和泛素化的蛋白质在实验性缺血性中风小鼠:生物信息学分析]。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-11-01 DOI: 10.18097/PBMC20226805390
V S Skvortsov, Y O Ivanova, A I Voronina

The experimental results available in the ProteomeXchange database (accession code PXD016538) (Simats et al. (2020) Molecular and Cellular Proteomics, 19(12), 1921-1936) obtained using a comprehensive multi-omics approach were analyzed in mouse blood to identify potential biomarkers of ischemic stroke. Acetylation, methylation, and ubiquitination were considered as post-translational modifications. The analysis of the significance of changes in the level of protein modification was evaluated for ischemic tissue in comparison with tissue undamaged by stroke and control taken from mice after sham operation. At the level of statistically significant differences according to the Mann-Whitney test (p < 0.05), 2 proteins were found (Q02248 and Q8BL66); for additional 7 proteins, the differences were at the level of a statistical trend (p < 0.1). For 7 of 9 selected proteins there are reports in the literature, for their association with cerebral ischemia.

使用综合多组学方法在小鼠血液中分析获得的实验结果(加入代码PXD016538) (Simats et al. (2020) Molecular and Cellular Proteomics, 19(12), 1921-1936),以确定缺血性中风的潜在生物标志物。乙酰化、甲基化和泛素化被认为是翻译后修饰。对比假手术后小鼠脑缺血组织与脑卒中未损伤组织及对照组,分析缺血组织蛋白修饰水平变化的意义。在Mann-Whitney检验差异有统计学意义的水平上(p < 0.05),发现2个蛋白(Q02248和Q8BL66);另外7种蛋白差异有统计学意义(p < 0.1)。在9种选定的蛋白质中,有7种与脑缺血有关,在文献中有报道。
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引用次数: 0
[Genotoxic stress leads to the proinflammatory response of endothelial cells: an in vitro study]. [基因毒性应激导致内皮细胞的促炎反应:一项体外研究]。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-11-01 DOI: 10.18097/PBMC20226805361
M Y Sinitsky, A V Sinitskaya, D K Shishkova, A V Ponasenko

It was shown, that genotoxic stress can trigger endothelial disfunction and atherosclerosis, but the molecular genetic mechanisms of this process are poorly investigated. At the same time, inflammation also plays the important role in atherogenesis. This study aimed access of inflammatory marker expression in the endothelial cells exposed to alkylating mutagen mitomycin C (MMC). Primary human coronary (HCAEC) and internal thoracic artery endothelial cells (HITAEC) exposed to 500 ng/ml MMC (experimental group) and 0.9% NaCl (control) were used in this research. A gene expression profile was evaluated by quantitative reverse transcription PCR after 6 h exposure of endothelial cells to MMC (or 0.9% NaCl) followed by subsequent 24 h incubation in the mutagen-free cell growth media. The cytokine profile of endotheliocytes was studied by dot blotting. We found that MIF, IL-8, MCP-1, IP-10 and PDGFB were upregulated both in HCAEC and HITAEC, while MIP-1β release remained unchanged. TIMP-2 was upregulated in HCAEC but not in HITAEC. sTNF RI was expressed only in HCAEC. According to gene expression analysis, HCAEC exposed to MMC are characterized by the increased mRNA level of IL-8, MCP-1 and IP-10; decreased expression of TIMP-2 and no differences in the expression of MIF, MIP-1β and PDGFB compared to the control. In HITAEC, increased mRNA level of IL-8 and IP-10; decreased expression of MIF and TIMP-2, no differences in the expression of MCP-1, MIP-1β and PDGFB was shown. TNF-RI expression was not detected in both cell lines. Thus, genotoxic stress in endothelial cells induced by MMC leads to differential inflammatory response that can trigger endothelial dysfunction.

研究表明,基因毒性应激可引发内皮功能障碍和动脉粥样硬化,但这一过程的分子遗传机制尚不清楚。同时,炎症在动脉粥样硬化中也起着重要作用。本研究旨在研究暴露于烷基化突变原丝裂霉素C (MMC)的内皮细胞中炎症标志物的表达。本研究以暴露于500 ng/ml MMC(实验组)和0.9% NaCl(对照组)的人原代冠状动脉(HCAEC)和胸内动脉内皮细胞(HITAEC)为研究对象。内皮细胞暴露于MMC(或0.9% NaCl) 6小时后,在无诱变剂的细胞生长培养基中孵育24小时,通过定量反转录PCR评估基因表达谱。用点印迹法研究内皮细胞的细胞因子谱。我们发现MIF、IL-8、MCP-1、IP-10和PDGFB在HCAEC和HITAEC中均上调,而MIP-1β的释放保持不变。TIMP-2在HCAEC中上调,而在HITAEC中没有上调。sTNF - RI仅在HCAEC中表达。基因表达分析显示,MMC暴露的HCAEC表现为IL-8、MCP-1、IP-10 mRNA水平升高;与对照组相比,TIMP-2表达降低,MIF、MIP-1β和PDGFB表达无差异。在HITAEC中,IL-8、IP-10 mRNA水平升高;MIF和TIMP-2表达降低,MCP-1、MIP-1β和PDGFB表达无差异。两种细胞系均未检测到TNF-RI的表达。因此,MMC诱导的内皮细胞基因毒性应激可导致不同的炎症反应,从而引发内皮功能障碍。
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引用次数: 0
[Zonulin - regulation of tight contacts in the brain and intestine - facts and hypotheses]. [Zonulin -大脑和肠道紧密接触的调节-事实和假设]。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-11-01 DOI: 10.18097/PBMC20226805309
S N Naryzhny, O K Legina

In recent years, the interrelationship between the brain and the gut has become an area of high scientific interest. The intestine is responsible not only for digestion, as it contains millions of neurons, its own immune system, and affects the emotional and cognitive processes. The relationship between the gut and the brain suggests that the processes carried out by the gut microbiota play a significant role in the regulation of brain function, and vice versa. A special role here is played by intercellular tight junctions (TJ), where the zonulin protein holds an important place. Zonulin, an unprocessed precursor of mature haptoglobin, is the only physiological modulator of intercellular TJ that can reversibly regulate the permeability of the intestinal (IB) and blood-brain (BBB) barriers in the human body. BBB disruption and altered microbiota composition are associated with many diseases, including neurological disorders and neuroinflammation. That is, there is a gut-brain axis (GBA) - a communication system through which the brain modulates the functions of the gastrointestinal tract (GIT) and vice versa. GBA is based on neuronal, endocrine, and immunological mechanisms that are interconnected at the organismal, organ, cellular, and molecular levels.

近年来,大脑和肠道之间的相互关系已成为一个高度科学兴趣的领域。肠道不仅负责消化,因为它包含数以百万计的神经元,它自己的免疫系统,并影响情绪和认知过程。肠道和大脑之间的关系表明,肠道微生物群所进行的过程在大脑功能的调节中起着重要作用,反之亦然。细胞间紧密连接(TJ)在这里起着特殊的作用,其中带蛋白占有重要的地位。Zonulin是一种未加工的成熟触珠蛋白前体,是细胞间TJ的唯一生理调节剂,可以可逆地调节人体肠(IB)和血脑(BBB)屏障的通透性。血脑屏障破坏和微生物群组成改变与许多疾病有关,包括神经系统疾病和神经炎症。也就是说,有一个肠脑轴(GBA)——一个大脑调节胃肠道功能(GIT)的通信系统,反之亦然。GBA基于神经元、内分泌和免疫机制,这些机制在生物体、器官、细胞和分子水平上相互联系。
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引用次数: 1
[Interactomics of CXXC proteins involved in epigenetic regulation of gene expression]. [参与基因表达表观遗传调控的CXXC蛋白的相互作用组学]。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-11-01 DOI: 10.18097/PBMC20226805339
P V Ershov, E O Yablokov, Y V Mezentsev, A S Ivanov

Regulation of gene expression is an extremely complex and multicomponent biological phenomenon. Proteins containing the CXXC-domain "zinc fingers" (CXXC-proteins) are master regulators of expression of many genes and have conserved functions of methylation of DNA bases and histone proteins. CXXC proteins function as a part of multiprotein complexes, which indicates the fundamental importance of studying post-translational regulation through modulation of the protein-protein interaction spectrum (PPI) in both normal and pathological conditions. In this paper we discuss general aspects of the involvement of CXXC proteins and their protein partners in neoplastic processes, both from the literature data and our own studies. Special attention is paid to recent data on the particular interactomics of the CFP1 protein encoded by the CXXC1 gene located on the human chromosome 18. CFP1 is devoid of enzymatic activity and implements epigenetic regulation of expression through binding to chromatin and a certain spectrum of PPIs.

基因表达调控是一个极其复杂的多组分生物现象。含有cxxc结构域“锌指”的蛋白(cxxc蛋白)是许多基因表达的主要调控因子,具有DNA碱基和组蛋白甲基化的保守功能。CXXC蛋白作为多蛋白复合物的一部分发挥作用,这表明在正常和病理条件下通过调节蛋白相互作用谱(PPI)来研究翻译后调控的重要性。在本文中,我们从文献数据和我们自己的研究中讨论了CXXC蛋白及其蛋白伴侣参与肿瘤过程的一般方面。本文特别关注了位于人类18号染色体上的CXXC1基因编码的CFP1蛋白的特定相互作用组学的最新数据。CFP1缺乏酶活性,通过与染色质和一定谱的PPIs结合实现表观遗传表达调控。
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引用次数: 0
[A relationship between zinc and anthropometric and metabolic indicators of obesity in the population of young russian men]. [锌与俄罗斯年轻男性肥胖人群的人体测量和代谢指标之间的关系]。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-11-01 DOI: 10.18097/PBMC20226805383
L V Osadchuk, A D Danilenko, A V Osadchuk

Trace elements are important factors in human health. Zinc, an essential trace element, is necessary for normal functioning of many body systems where it plays an important role in metabolism. Obesity is accompanied by various metabolic pathologies provoking the development of dyslipidaemia, metabolic syndrome, type 2 diabetes mellitus, arterial hypertension, cardiovascular diseases and cancer. Many studies demonstrate changes in zinc homeostasis in obese men, but the data are conflicting, and a relationship between serum zinc and anthropometric and metabolic indicators remains controversial. In this study we have investigate the relationship between serum zinc level and body mass index (BMI), waist circumference (WC), and some metabolic parameters in Russian men. In 260 young men from the general population (n=268, median age 22 years), serum zinc, triglycerides (TG), total cholesterol (TC), high and low density lipoprotein cholesterol (HDL and LDL), glucose and uric acid levels were determined, as well as body weight, height, waist circumference (WC), and BMI were evaluated. According to BMI, men were divided into four groups: deficient and normal body weight, overweight, obesity. According to WC men were subdivided into two groups: normal and abdominal-visceral type of obesity. The median serum zinc concentration in men of the entire studied population was 20.3 μmol/l, and in men with obesity (BMI≥30) the median serum zinc concentration was higher than in the corresponding value in men with normal weight (30.9 and 20.8 μmol/l, respectively, p<0.01). Serum levels of TG, TC and LDL in obese men were also significantly higher (p<0.01) as compared to men with normal weight. In men with abdominal-visceral obesity, the median serum zinc concentration was significantly higher in comparison with control (26.3 and 19.9 μmol/l, respectively, p<0.01). It is suggested that elevated serum zinc level in obese young men can counter chronic inflammation and oxidative stress caused by increased body fat.

微量元素是影响人体健康的重要因素。锌,一种必需的微量元素,是许多身体系统正常运作所必需的,它在新陈代谢中起着重要作用。肥胖伴随着各种代谢病理,引发血脂异常、代谢综合征、2型糖尿病、动脉高血压、心血管疾病和癌症的发展。许多研究表明,肥胖男性体内锌的平衡发生了变化,但数据相互矛盾,血清锌与人体测量和代谢指标之间的关系仍然存在争议。在本研究中,我们探讨了血清锌水平与俄罗斯男性体重指数(BMI)、腰围(WC)和一些代谢参数的关系。260名年轻男性(n=268,中位年龄22岁),测定血清锌、甘油三酯(TG)、总胆固醇(TC)、高、低密度脂蛋白胆固醇(HDL和LDL)、葡萄糖和尿酸水平,并评估体重、身高、腰围(WC)和BMI。根据身体质量指数,男性被分为四组:体重不足和正常、超重、肥胖。根据WC,男性被细分为两组:正常型肥胖和腹部-内脏型肥胖。整个研究人群中男性血清锌浓度中位数为20.3 μmol/l,肥胖(BMI≥30)男性血清锌浓度中位数高于正常体重男性(分别为30.9和20.8 μmol/l, p
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引用次数: 1
[Metabolome profiling in the study of aging processes]. [衰老过程研究中的代谢组分析]。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-11-01 DOI: 10.18097/PBMC20226805321
E E Balashova, O P Trifonova, D L Maslov, S R Lichtenberg, P G Lokhov, A I Archakov

Aging of a living organism is closely related to systemic metabolic changes. But due to the multilevel and network nature of metabolic pathways, it is difficult to understand these connections. Today, this problem is solved using one of the main approaches of metabolomics - untargeted metabolome profiling. The purpose of this publication is to systematize the results of metabolomic studies based on such profiling, both in animal models and in humans.

生物体的衰老与全身代谢变化密切相关。但由于代谢途径的多层次和网络性质,很难理解这些联系。今天,这个问题是解决使用代谢组学的主要方法之一-非靶向代谢组分析。本出版物的目的是将基于这种分析的代谢组学研究结果系统化,包括动物模型和人类。
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引用次数: 0
[Behavioral and neuroreceptor effects of the racetam derivative GIZh-290 in mouse experimental attention deficit model]. [消拉西坦衍生物giz -290在小鼠实验注意缺陷模型中的行为和神经受体效应]。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-11-01 DOI: 10.18097/PBMC20226805367
G I Kovalev, N A Sukhorukova, E V Vasileva, E A Kondrakhin, R M Salimov, V B Narkevich, V S Kudrin

Behavioral and neurochemical effects of the new racetam derivative GIZh-290 were studied in a mouse attention deficit model (the ED-Low animals subpopulation selected during preliminary behavioral typing in the "closed enriched cross maze" test). Subchronic administration of GIZh-290 (1 mg/kg, 3 mg/kg and 5 mg/kg, intraperitoneally, for 6 days), increased the initially low level of attention in ED-Low animals; the highest selectivity was observed at a dose of 3 mg/kg. Radioligand analysis showed that at this dose, the drug changed density (Bmax) of D2 and GABAB receptors as markers in the pre-frontal cortex of the ED-Low subpopulation to Bmax values observed in the ED-High subpopulation. In the prefrontal cortex of the ED-Low rodents treated with GIZh-290 in dose of 3 mg/kg, there was a normalization of tissue concentrations of both dopamine itself (DA) and its intra- and extracellular metabolites (DOPA/DA and HVA/DA). The obtained results indicate the effectiveness of the studied drug for pharmacotherapy of attention deficit in experimental modeling and impact on potential molecular targets identified in the study.

新消旋坦衍生物giz -290在小鼠注意缺陷模型(在“封闭富集交叉迷宫”试验中选择的ED-Low动物亚群进行初步行为分型)中研究了行为和神经化学效应。亚慢性给药giz -290 (1mg /kg、3mg /kg和5mg /kg,腹腔注射,持续6天)可提高ED-Low动物最初的低注意力水平;在剂量为3 mg/kg时观察到最高的选择性。放射配体分析显示,在该剂量下,药物将ED-Low亚群前额叶皮层D2和GABAB受体作为标记物的密度(Bmax)改变为ED-High亚群所观察到的Bmax值。以3 mg/kg剂量的giz -290处理ED-Low啮齿动物的前额叶皮层,多巴胺本身(DA)及其细胞内和细胞外代谢物(DOPA/DA和HVA/DA)的组织浓度均恢复正常。实验结果表明了所研究药物对注意缺陷药物治疗的有效性,以及对研究中确定的潜在分子靶点的影响。
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引用次数: 0
期刊
Biomeditsinskaya khimiya
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