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Secreted proteins encoded by super enhancer-driven genes could be promising biomarkers for early detection of esophageal squamous cell carcinoma 由超级增强子驱动的基因编码的分泌蛋白可能是早期检测食管鳞状细胞癌的有前途的生物标志物。
IF 4.1 3区 医学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-08-01 DOI: 10.1016/j.bj.2023.100662

Background

Early detection of cancer remains an unmet need in clinical practice, and high diagnostic sensitivity and specificity biomarkers are urgently required. Here, we attempted to identify secreted proteins encoded by super-enhancer (SE)-driven genes as diagnostic biomarkers for esophageal squamous cell carcinoma (ESCC).

Methods

We conducted an integrative analysis of multiple data sets including ChIP-seq data, secretome data, CCLE data and GEO data to screen secreted proteins encoded by SE-driven genes. Using ELISA, we further identified up-regulated secreted proteins through a small size of clinical samples and verified in a multi-centre validation stage (345 in test cohort and 231 in validation cohort). Receiver operating characteristic curves were used to calculate diagnostic accuracy. Artificial intelligence (AI) method named gradient boosting machine (GBM) were applied for model construction to enhance diagnostic accuracy.

Results

Serum EFNA1 and MMP13 were identified, and showed significantly higher levels in ESCC patients compared to normal controls. An integrated Five-Biomarker Panel (iFBPanel) established by combining EFNA1, MMP13, carcino-embryonic antigen, Cyfra21-1 and squmaous cell carcinoma antigen had AUCs of 0.881 and 0.880 for ESCC in test and validation cohorts, respectively. Importantly, the iFBPanel also exhibited good performance in detecting early-stage ESCC patients (0.872 and 0.864). Furthermore, the iFBPanel was further empowered by AI technology which showed excellent diagnostic performance in early-stage ESCC (0.927 and 0.907).

Conclusions

Our study suggested that serum EFNA1 and MMP13 could potentially assist ESCC detection, and provided an easy-to-use detection model that might help the diagnosis of early-stage ESCC.

背景:癌症的早期检测在临床实践中仍然是一个未满足的需求,迫切需要高诊断灵敏度和特异性的生物标志物。在这里,我们试图鉴定由超级增强子(SE)驱动基因编码的分泌蛋白作为食管鳞状细胞癌(ESCC)的诊断生物标志物。使用ELISA,我们通过小规模的临床样本进一步鉴定了上调的分泌蛋白,并在多中心验证阶段进行了验证(测试队列中345个,验证队列中231个)。受试者工作特性曲线用于计算诊断准确性。将人工智能(AI)方法称为梯度提升机(GBM)用于模型构建,以提高诊断准确性。结果:ESCC患者的血清EFNA1和MMP13得到鉴定,与正常对照组相比,其水平显著升高。通过结合EFNA1、MMP13、癌胚抗原、Cyfra21-1和鳞状细胞癌抗原建立的综合五种生物标志物面板(iFBPanel)在测试和验证队列中ESCC的AUC分别为0.881和0.880。重要的是,iFBPanel在检测早期ESCC患者方面也表现出良好的性能(0.872和0.864)。此外,人工智能技术进一步增强了iFBPanell的能力,在早期ESCC中表现出优异的诊断性能(0.927和0.907)。结论:我们的研究表明,血清EFNA1和MMP13可能有助于ESCC的检测,并提供了一种易于使用的检测模型,该模型可能有助于早期ESCC的诊断。
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引用次数: 0
Sacral Magnetic Neuromodulation with Intermittent Theta Burst Waveform Enhances Overactive Bladder: In Vivo Study. 骶磁神经调控与间歇性 Theta 爆发波形可改善膀胱过度活动症:体内研究。
IF 4.1 3区 医学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-07-24 DOI: 10.1016/j.bj.2024.100775
Nurida Khasanah, Hung-Yen Chin, Wei-Lun Lo, Bor-Shing Lin, Hung-Chou Chen, Jian-Chiun Liou, Chun-Wei Wu, Chih-Wei Peng

Background: The current treatment options for overactive bladder (OAB) continue to pose challenges for refractory cases and may involve invasive procedures. To assess the potential benefit of non-invasive repetitive peripheral magnetic stimulation (rPMS) on sacral roots using intermittent theta burst stimulation (iTBS) as treatment option for OAB. The study involved a total of 33 rats, which were divided into three different experimental phases.

Materials and methods: To induce bladder overactivity rats were pretreated with a continuous transvesical infusion of 0.5% acetic acid (AA). During bladder infusion, the intravesical pressure was recorded using cystometrography (CMG) to investigate the effects of AA pretreatment and the therapeutic intervention of acute sacral rPMS using iTBS.

Results: Pre-application of rPMS with iTBS at a 100% intensity significantly extended the mean first voiding time (Tv) in normal healthy rats to 132%. Acute rPMS iTBS at a 100% intensity resulted in a significant increase of the inter-contraction interval (ICI) to 121%. An AA model was established with continuous saline infusion after 0.5% AA treatment and resulted in significant reductions of Tv to 42% and ICI to 56% of the corresponding control values. Subsequently, rPMS iTBS at a 100% intensity on the sacral nerve effectively inhibited AA-induced bladder overactivity and significantly increased the ICI to 167%∼222%. No significant changes in maximum bladder pressure (Pmax) were found.

Conclusions: Sacral nerve rPMS with iTBS demonstrated the ability to suppress AA-induced bladder overactivity. This promising modality could be developed as an alternative approach to enhance bladder continence in OAB syndrome patients.

背景:目前治疗膀胱过度活动症(OAB)的方法仍然对难治性病例构成挑战,而且可能涉及侵入性手术。为了评估使用间歇θ脉冲刺激(iTBS)对骶骨根进行非侵入性重复外周磁刺激(rPMS)作为治疗膀胱过度活动症选择的潜在益处。研究共涉及 33 只大鼠,分为三个不同的实验阶段:为了诱导膀胱过度活动,对大鼠进行经膀胱持续输注 0.5% 乙酸(AA)的预处理。在膀胱输注过程中,使用膀胱造影(CMG)记录膀胱内压,以研究 AA 预处理的效果以及使用 iTBS 对急性骶骨 rPMS 进行治疗干预的效果:结果:用强度为 100%的 iTBS 预处理 rPMS 可将正常健康大鼠的平均首次排尿时间(Tv)显著延长 132%。强度为 100%的急性 rPMS iTBS 可使收缩间期(ICI)显著延长至 121%。在 0.5% AA 治疗后,通过持续输注生理盐水建立了 AA 模型,结果 Tv 显著降至相应对照值的 42%,ICI 降至 56%。随后,骶神经上100%强度的rPMS iTBS能有效抑制AA诱导的膀胱过度活动,并将ICI显著提高至167%∼222%。最大膀胱压力(Pmax)没有明显变化:结论:使用 iTBS 的骶神经 rPMS 能够抑制 AA 诱导的膀胱过度活动。这种很有前景的方法可作为一种替代方法,用于提高 OAB 综合征患者的膀胱持续能力。
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引用次数: 0
LncRNAs and asymmetric cell division: the epigenetic mechanisms. LncRNA 与不对称细胞分裂:表观遗传机制。
IF 4.1 3区 医学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-07-24 DOI: 10.1016/j.bj.2024.100774
Hsiao-Fan Chen, Kou-Juey Wu

Asymmetric cell division (ACD) plays a pivotal role in development, tissue homeostasis, and stem cell maintenance. Emerging evidence suggests that long non-coding RNAs (lncRNAs) are key regulators of ACD, orchestrating the intricate molecular machinery that governs cell fate determination. This review summarizes current literature to elucidate the diverse roles of lncRNAs in modulating ACD across various biological contexts. The regulatory mechanisms of asymmetric cell division mediated by lncRNAs, including their interactions with protein effectors, epigenetic regulation, and subcellular localization are explored. Additionally, we discuss the implications of dysregulated lncRNAs in mediating ACD that lead to tumorigenesis. By integrating findings from diverse experimental models and cell types, this review provides insights into the multifaceted roles of lncRNAs in governing asymmetric cell division, shedding light on fundamental biological processes. Further research in this area may lead to the development of novel therapies targeting dysregulated lncRNAs to restore proper cell division and function. The knowledge of lncRNAs regulating ACD could potentially revolutionize the field of regenerative medicine and cancer therapy by targeting specific lncRNAs involved in ACD. By unraveling the complex interactions between lncRNAs and cellular processes, the potential novel opportunities for precision medicine approaches may be uncovered.

不对称细胞分裂(ACD)在发育、组织稳态和干细胞维持中起着关键作用。新近的证据表明,长非编码RNA(lncRNA)是ACD的关键调控因子,协调着决定细胞命运的复杂分子机制。这篇综述总结了目前的文献,以阐明 lncRNA 在调节各种生物背景下的非对称分裂过程中发挥的不同作用。我们探讨了由 lncRNAs 介导的不对称细胞分裂的调控机制,包括它们与蛋白质效应因子的相互作用、表观遗传调控和亚细胞定位。此外,我们还讨论了调控失调的 lncRNA 在介导 ACD 并导致肿瘤发生方面的影响。通过整合不同实验模型和细胞类型的研究结果,这篇综述深入探讨了 lncRNA 在调控不对称细胞分裂中的多方面作用,揭示了基本的生物学过程。该领域的进一步研究可能会开发出针对失调的 lncRNA 的新型疗法,以恢复正常的细胞分裂和功能。通过靶向参与ACD的特定lncRNAs,对调控ACD的lncRNAs的了解有可能彻底改变再生医学和癌症治疗领域。通过揭示 lncRNA 与细胞过程之间复杂的相互作用,可能会为精准医疗方法带来潜在的新机遇。
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引用次数: 0
High-fat diet-induced increase in glucocorticoids contributes to adipogenesis in obese mice. 高脂饮食引起的糖皮质激素增加有助于肥胖小鼠的脂肪生成。
IF 4.1 3区 医学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-07-22 DOI: 10.1016/j.bj.2024.100772
Sheng-Feng Tsai, Pei-Ling Hsu, Mei-Chen Yeh, Hao-Chang Hung, Monica Meng-Chun Shih, Bon-Chu Chung, Chia-Yih Wang, Chih-Jen Chang, Yu-Min Kuo

Background: This study was designed to examine how glucocorticoids (GCs) induced by a long-term ingestion of high-fat diet (HFD) mediate the HFD-induced adipose expansion and obesity.

Material and methods: To address this goal, we used a unique L/L mouse model that fails to induce its corticosterone (CORT) level, a major type of GCs in rodents, after prolonged exposure to an HFD.

Results: We found that, after receiving a 12-week HFD feeding, the L/L mice show less weight gain, milder adipose expansion, and higher plasma levels of triglycerides than the wild-type mice. These changes were reversed by replenishing CORT to L/L mice. When examining the expression levels of various molecules linked to lipid uptake and de novo lipogenesis in CORT-induced adipose expansion, we observed a reduction in the expression of adipose preadipocyte factor 1 (Pref-1), a key regulator in adipogenesis. In 3T3-L1 preadipocyte-like cells, dexamethasone, an agonist of the glucocorticoid receptor, also reduced expressions of Pref-1 and facilitated intracellular accumulation of lipids.

Conclusions: Our results suggest that fat ingestion-induced release of CORT contributes to adipose expansion and development of obesity and highlight the pathogenic role of CORT-mediated downregulation of adipose Pref-1 in diet-induced obesity.

背景:本研究旨在探讨长期摄入高脂饮食(HFD)诱导的糖皮质激素(GCs)如何介导HFD诱导的脂肪膨胀和肥胖:为了实现这一目标,我们使用了一种独特的 L/L 小鼠模型,该模型在长期摄入高脂饮食后不能诱导皮质酮(CORT)水平,而皮质酮是啮齿类动物体内的一种主要 GCs:结果:我们发现,与野生型小鼠相比,L/L 型小鼠在摄入 12 周高密度脂蛋白后体重增加较少,脂肪膨胀较轻,血浆甘油三酯水平较高。给L/L小鼠补充CORT后,这些变化被逆转。在研究 CORT 诱导的脂肪膨胀过程中与脂质摄取和新脂肪生成相关的各种分子的表达水平时,我们观察到脂肪前脂肪细胞因子 1(Pref-1)的表达减少,而 Pref-1 是脂肪生成的一个关键调节因子。在 3T3-L1 类前脂肪细胞中,糖皮质激素受体激动剂地塞米松也会降低 Pref-1 的表达,并促进脂质在细胞内的积累:我们的研究结果表明,脂肪摄入诱导的 CORT 释放有助于脂肪膨胀和肥胖的发生,并强调了 CORT 介导的脂肪 Pref-1 下调在饮食诱导肥胖中的致病作用。
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引用次数: 0
The establishment of a molecular diagnostic platform for mitochondrial diseases: from conventional to next-generation sequencing. 线粒体疾病分子诊断平台的建立:从传统测序到新一代测序。
IF 4.1 3区 医学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-07-22 DOI: 10.1016/j.bj.2024.100770
Ni-Chin Tsai, Chai-Wai Liou, Yin-Hua Cheng, Hao-Ting Lien, Tzu-Ling Lin, Tsu-Kung Lin, Min-Yu Lan, Pi-Lien Hung, Tzu-Jou Wang, Chen-Hao Lee, Yi-Chih Liang, Kuo-Chung Lan

Background: The aim of this study was to create a molecular diagnostic platform and establish a diagnostic pipeline for patients highly suspected of mitochondrial disorders. The effectiveness of three methods, namely, traditional restriction fragment length polymorphism-polymerase chain reaction (RFLP-PCR), Sanger sequencing for hotspot detection and whole mitochondrial DNA (mtDNA), and third-generation (Nanopore) whole mtDNA sequencing, will be compared in diagnosing patients with suspected primary mitochondrial diseases (PMDs). The strengths and limitations of different methods are also discussed.

Material and methods: A single-center prospective cohort study was conducted to validate the diagnostic pipeline for suspected mitochondrial diseases. In the first stage, a PCR-based method with five sets of primers was used to screen for eight hotspots (m.3243A>G, m.3460G>A, m.8344A>G, m.8993T>G, m.9185T>C, m.11778G>A, m.13513G>A, and m.4977deletion) using either RFLP or direct Sanger sequencing. Sanger sequencing was also used to confirm the RFLP-positive samples. In the second stage, for samples with negative screening results for the eight hotspots, mitochondrial whole-genome sequencing was performed using Sanger sequencing or third-generation nanopore sequencing.

Results: Between June 2020 and May 2023, 30 patients from ages 0 to 63 with clinically suspected mitochondrial disease were enrolled. The positive yield for the diagnosis of PMDs was 8/30=26.7%, and the sensitivity of the heteroplasmy level for the RFLP-based method was approximately 5%. The remaining 22 patients who tested negative at the first stage were tested using Sanger sequencing or the third-generation sequencing Nanopore, and all tested negative for pathological mtDNA mutations. Compared to the Sanger sequencing method, the results of RFLP-PCR were compromised by the limitations of incomplete RFLP enzyme digestion. For whole-genome sequencing of mtDNA, Sanger sequencing, instead of nanopore sequencing, is preferred at our institution because of its cost-effectiveness.

Conclusions: In our highly selective cohort, most tested positive in the first stage of the 8 hot spots screen. Sanger sequencing is a conventional and accurate method for mitochondrial disease screening, at least for the most common hot spots in the region. The results revealed that Sanger sequencing is an accurate method with the benefit of being more cost-effective. This integral platform of molecular diagnosis bears the advantages of being relatively low cost and having a shorter reporting time, facilitating crucial identification of patients with clinical evidence of such disorders. This diagnostic flowchart has also been translated into routine clinical use in the tertiary hospital.

研究背景本研究旨在创建一个分子诊断平台,并为高度怀疑患有线粒体疾病的患者建立诊断管道。研究将比较三种方法,即传统的限制性片段长度多态性聚合酶链反应(RFLP-PCR)、用于热点检测和全线粒体DNA(mtDNA)的桑格测序法以及第三代(Nanopore)全线粒体DNA测序法,在诊断疑似原发性线粒体疾病(PMDs)患者方面的有效性。材料和方法:为了验证疑似线粒体疾病的诊断方法,我们进行了一项单中心前瞻性队列研究。在第一阶段,采用五组引物的 PCR 方法,利用 RFLP 或直接 Sanger 测序筛选八个热点(m.3243A>G、m.3460G>A、m.8344A>G、m.8993T>G、m.9185T>C、m.11778G>A、m.13513G>A 和 m.4977deletion)。Sanger 测序也用于确认 RFLP 阳性样本。在第二阶段,对于八个热点筛选结果呈阴性的样本,采用桑格测序法或第三代纳米孔测序法进行线粒体全基因组测序:结果:2020 年 6 月至 2023 年 5 月期间,30 名临床疑似线粒体疾病的 0 至 63 岁患者入组。PMD诊断的阳性率为8/30=26.7%,基于RFLP方法的异体水平灵敏度约为5%。第一阶段检测结果为阴性的其余22名患者使用桑格测序法或第三代测序法Nanopore进行检测,结果显示所有患者的病理mtDNA突变均为阴性。与桑格测序法相比,RFLP-PCR 的结果受到 RFLP 酶消化不完全的限制。对于mtDNA的全基因组测序,我们机构更倾向于使用桑格测序法,而不是纳米孔测序法,因为它具有成本效益:在我们的高选择性队列中,大多数人在 8 个热点筛查的第一阶段检测中呈阳性。桑格测序是线粒体疾病筛查的一种传统而准确的方法,至少对该地区最常见的热点来说是如此。结果表明,桑格测序是一种准确的方法,而且成本效益更高。这一完整的分子诊断平台具有成本相对较低、报告时间较短的优点,有助于对有临床证据表明患有此类疾病的患者进行重要的鉴定。该诊断流程图也已被转化为三级医院的常规临床应用。
{"title":"The establishment of a molecular diagnostic platform for mitochondrial diseases: from conventional to next-generation sequencing.","authors":"Ni-Chin Tsai, Chai-Wai Liou, Yin-Hua Cheng, Hao-Ting Lien, Tzu-Ling Lin, Tsu-Kung Lin, Min-Yu Lan, Pi-Lien Hung, Tzu-Jou Wang, Chen-Hao Lee, Yi-Chih Liang, Kuo-Chung Lan","doi":"10.1016/j.bj.2024.100770","DOIUrl":"https://doi.org/10.1016/j.bj.2024.100770","url":null,"abstract":"<p><strong>Background: </strong>The aim of this study was to create a molecular diagnostic platform and establish a diagnostic pipeline for patients highly suspected of mitochondrial disorders. The effectiveness of three methods, namely, traditional restriction fragment length polymorphism-polymerase chain reaction (RFLP-PCR), Sanger sequencing for hotspot detection and whole mitochondrial DNA (mtDNA), and third-generation (Nanopore) whole mtDNA sequencing, will be compared in diagnosing patients with suspected primary mitochondrial diseases (PMDs). The strengths and limitations of different methods are also discussed.</p><p><strong>Material and methods: </strong>A single-center prospective cohort study was conducted to validate the diagnostic pipeline for suspected mitochondrial diseases. In the first stage, a PCR-based method with five sets of primers was used to screen for eight hotspots (m.3243A>G, m.3460G>A, m.8344A>G, m.8993T>G, m.9185T>C, m.11778G>A, m.13513G>A, and m.4977deletion) using either RFLP or direct Sanger sequencing. Sanger sequencing was also used to confirm the RFLP-positive samples. In the second stage, for samples with negative screening results for the eight hotspots, mitochondrial whole-genome sequencing was performed using Sanger sequencing or third-generation nanopore sequencing.</p><p><strong>Results: </strong>Between June 2020 and May 2023, 30 patients from ages 0 to 63 with clinically suspected mitochondrial disease were enrolled. The positive yield for the diagnosis of PMDs was 8/30=26.7%, and the sensitivity of the heteroplasmy level for the RFLP-based method was approximately 5%. The remaining 22 patients who tested negative at the first stage were tested using Sanger sequencing or the third-generation sequencing Nanopore, and all tested negative for pathological mtDNA mutations. Compared to the Sanger sequencing method, the results of RFLP-PCR were compromised by the limitations of incomplete RFLP enzyme digestion. For whole-genome sequencing of mtDNA, Sanger sequencing, instead of nanopore sequencing, is preferred at our institution because of its cost-effectiveness.</p><p><strong>Conclusions: </strong>In our highly selective cohort, most tested positive in the first stage of the 8 hot spots screen. Sanger sequencing is a conventional and accurate method for mitochondrial disease screening, at least for the most common hot spots in the region. The results revealed that Sanger sequencing is an accurate method with the benefit of being more cost-effective. This integral platform of molecular diagnosis bears the advantages of being relatively low cost and having a shorter reporting time, facilitating crucial identification of patients with clinical evidence of such disorders. This diagnostic flowchart has also been translated into routine clinical use in the tertiary hospital.</p>","PeriodicalId":8934,"journal":{"name":"Biomedical Journal","volume":" ","pages":"100770"},"PeriodicalIF":4.1,"publicationDate":"2024-07-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141756991","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Association Between Pentoxifylline Use and Diabetic Retinopathy in Patients with Type 2 Diabetes Mellitus and Chronic Kidney Disease: A Multi-Institutional Cohort Study. 2 型糖尿病合并慢性肾脏病患者使用五氧嘧啶与糖尿病视网膜病变之间的关系:一项多机构队列研究。
IF 4.1 3区 医学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-07-19 DOI: 10.1016/j.bj.2024.100771
Tzu-Yi Lin, Eugene Yu-Chuan Kang, Nan-Kai Wang, Je-Ho Kang, Kuan-Jen Chen, Wei-Chi Wu, Chi-Chun Lai, Yih-Shiou Hwang

Background: Pentoxifylline is administrated to improve the hemodynamics of patients with chronic kidney disease (CKD). Despite the improvement of capillary blood flow velocity in retina after pentoxifylline use, no evidence has been provided to prove the protective effect for diabetic retinopathy (DR). Therefore, this study aimed to assess the risk of DR in pentoxifylline users with CKD and diabetes mellitus (DM).

Material and methods: In this retrospective cohort study, Chang Gung Research Database, which includes the data of patients with CKD and DM from 2003 to 2019, was used. Each calendar year was divided into 4 data units with 3 months each for every patient and every year during the follow-up. The ocular outcomes were new-onset DR, DR-related complications, and vitreoretinal interventions.

Results: Total 56,439 patients without preexisting DR and 5,039 patients with preexisting DR were included in this study. Exposure to pentoxifylline was associated with elevated risk of new-onset DR (adjusted hazard ratio = 1.24, 95% confidence interval = 1.13-1.36) in patients without preexisting DR. Additionally, exposure to pentoxifylline was associated with elevated risk of DR-related complications and vitreoretinal interventions in patients with or without preexisting DR.

Conclusions: Exposure to pentoxifylline is associated with elevated risk of DR, regardless of whether patients have preexisting DR.

背景:使用五氧去氧肾上腺素可改善慢性肾脏病(CKD)患者的血液动力学。尽管使用五氧去氧肾上腺素后视网膜毛细血管血流速度有所改善,但尚无证据证明其对糖尿病视网膜病变(DR)有保护作用。因此,本研究旨在评估患有慢性肾脏病和糖尿病(DM)的戊唑醇使用者发生 DR 的风险:在这项回顾性队列研究中,使用了长庚研究数据库,其中包括 2003 年至 2019 年期间 CKD 和 DM 患者的数据。在随访期间,每个日历年分为 4 个数据单元,每个单元为每个患者和每年 3 个月。眼部结果包括新发 DR、DR 相关并发症和玻璃体视网膜干预:本研究共纳入了 56439 名未患 DR 的患者和 5039 名已患 DR 的患者。在无原有 DR 的患者中,接触戊氧地塞米松与新发 DR 风险升高有关(调整后危险比 = 1.24,95% 置信区间 = 1.13-1.36)。此外,无论是否已存在DR,暴露于戊氧肾上腺素均与DR相关并发症和玻璃体视网膜干预风险升高有关:结论:无论患者是否患有先天性DR,接触戊乙福林都与DR风险升高有关。
{"title":"Association Between Pentoxifylline Use and Diabetic Retinopathy in Patients with Type 2 Diabetes Mellitus and Chronic Kidney Disease: A Multi-Institutional Cohort Study.","authors":"Tzu-Yi Lin, Eugene Yu-Chuan Kang, Nan-Kai Wang, Je-Ho Kang, Kuan-Jen Chen, Wei-Chi Wu, Chi-Chun Lai, Yih-Shiou Hwang","doi":"10.1016/j.bj.2024.100771","DOIUrl":"https://doi.org/10.1016/j.bj.2024.100771","url":null,"abstract":"<p><strong>Background: </strong>Pentoxifylline is administrated to improve the hemodynamics of patients with chronic kidney disease (CKD). Despite the improvement of capillary blood flow velocity in retina after pentoxifylline use, no evidence has been provided to prove the protective effect for diabetic retinopathy (DR). Therefore, this study aimed to assess the risk of DR in pentoxifylline users with CKD and diabetes mellitus (DM).</p><p><strong>Material and methods: </strong>In this retrospective cohort study, Chang Gung Research Database, which includes the data of patients with CKD and DM from 2003 to 2019, was used. Each calendar year was divided into 4 data units with 3 months each for every patient and every year during the follow-up. The ocular outcomes were new-onset DR, DR-related complications, and vitreoretinal interventions.</p><p><strong>Results: </strong>Total 56,439 patients without preexisting DR and 5,039 patients with preexisting DR were included in this study. Exposure to pentoxifylline was associated with elevated risk of new-onset DR (adjusted hazard ratio = 1.24, 95% confidence interval = 1.13-1.36) in patients without preexisting DR. Additionally, exposure to pentoxifylline was associated with elevated risk of DR-related complications and vitreoretinal interventions in patients with or without preexisting DR.</p><p><strong>Conclusions: </strong>Exposure to pentoxifylline is associated with elevated risk of DR, regardless of whether patients have preexisting DR.</p>","PeriodicalId":8934,"journal":{"name":"Biomedical Journal","volume":" ","pages":"100771"},"PeriodicalIF":4.1,"publicationDate":"2024-07-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141733498","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Which outcomes are key to the pre-intervention assessment profile of a child with developmental coordination disorder? A systematic review and meta-analysis. 哪些结果是发育协调障碍儿童干预前评估概况的关键?系统回顾与荟萃分析。
IF 4.1 3区 医学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-07-18 DOI: 10.1016/j.bj.2024.100768
Bouwien Smits-Engelsman, Marisja Denysschen, Jessica Lust, Dané Coetzee, Ludvik Valtr, Marina Schoemaker, Evi Verbecque

Background: Purpose of this study was to determine what key aspects of function should be incorporated to make up a pre-intervention assessment profile of a child with Developmental Coordination Disorder (DCD); more specifically, what aspects of functioning are implicated in DCD and what is their relative impact?

Methods: A systematic review and meta-analysis were conducted, for which Pubmed, Web of Science, Scopus and Proquest were searched (last update: April 2023, PROSPERO: CRD42023461619). Case-control studies were included to determine point estimates for performances on field-based tests in different domains of functioning. Risk of bias was assessed, and level of evidence estimated. Random-effect meta-analyses were performed to calculate the pooled standardized mean differences for domains of functioning and subgrouping was done for clinically relevant subdomains. Heterogeneity was determined with I2.

Results: 121 papers were included for analyses. Data of 5 923 children with DCD were included (59.8% boys) and 23 619 Typically Developing (TD) children (45.8% boys). The mean (SD) age of the DCD group was 10.3y (1.2) and 9.3y (1.3) for the TD children. Moderate evidence was found for motor performance, executive functions, sensory processing and perceptions, cognitive functions and sports and leisure activities to be affected in children with DCD.

Conclusion: Differences between the two groups varied per domain of functioning. This emphasizes the diversity present within children with DCD and provides a rationale for explaining the heterogeneity in this patient group. Yet, results highlight the potential involvement of all these domains and call for clinicians to be alert not only to examine motor skill difficulties but also other aspects of function. Results indicate the need to develop an individualized pre-intervention multi-dimensional assessment profile for each child with DCD. It also supports the important role that clinicians play in an interdisciplinary team to tackle the difficulties encountered by children with DCD.

研究背景本研究的目的是确定在对发育协调障碍(DCD)儿童进行干预前评估时,应纳入哪些关键的功能方面;更具体地说,哪些功能方面与 DCD 有关,以及它们的相对影响是什么?对 Pubmed、Web of Science、Scopus 和 Proquest 进行了系统回顾和荟萃分析(最后更新时间:2023 年 4 月,PROSPERO:CRD42023461619)。其中包括病例对照研究,以确定不同功能领域的现场测试表现的点估计值。对偏倚风险进行了评估,并对证据水平进行了估计。进行随机效应荟萃分析以计算功能领域的集合标准化均值差异,并对临床相关的子领域进行分组。异质性用I2确定:共纳入 121 篇论文进行分析。共纳入了 5 923 名患有 DCD 的儿童(59.8% 为男孩)和 23 619 名发育正常(TD)儿童(45.8% 为男孩)的数据。DCD 组儿童的平均(标清)年龄为 10.3 岁(1.2),TD 组儿童的平均(标清)年龄为 9.3 岁(1.3)。研究发现,中等程度的证据表明,DCD儿童的运动表现、执行功能、感觉处理和知觉、认知功能以及运动和休闲活动会受到影响:结论:两组儿童在各个功能领域的差异各不相同。这强调了 DCD 儿童的多样性,并为解释这一患者群体的异质性提供了理论依据。然而,研究结果强调了所有这些领域的潜在参与性,并呼吁临床医生不仅要警惕运动技能方面的困难,还要注意功能的其他方面。研究结果表明,有必要为每名儿童发育迟缓症患者制定个性化的干预前多维评估档案。它还支持临床医生在跨学科团队中发挥重要作用,以解决 DCD 儿童遇到的困难。
{"title":"Which outcomes are key to the pre-intervention assessment profile of a child with developmental coordination disorder? A systematic review and meta-analysis.","authors":"Bouwien Smits-Engelsman, Marisja Denysschen, Jessica Lust, Dané Coetzee, Ludvik Valtr, Marina Schoemaker, Evi Verbecque","doi":"10.1016/j.bj.2024.100768","DOIUrl":"https://doi.org/10.1016/j.bj.2024.100768","url":null,"abstract":"<p><strong>Background: </strong>Purpose of this study was to determine what key aspects of function should be incorporated to make up a pre-intervention assessment profile of a child with Developmental Coordination Disorder (DCD); more specifically, what aspects of functioning are implicated in DCD and what is their relative impact?</p><p><strong>Methods: </strong>A systematic review and meta-analysis were conducted, for which Pubmed, Web of Science, Scopus and Proquest were searched (last update: April 2023, PROSPERO: CRD42023461619). Case-control studies were included to determine point estimates for performances on field-based tests in different domains of functioning. Risk of bias was assessed, and level of evidence estimated. Random-effect meta-analyses were performed to calculate the pooled standardized mean differences for domains of functioning and subgrouping was done for clinically relevant subdomains. Heterogeneity was determined with I<sup>2</sup>.</p><p><strong>Results: </strong>121 papers were included for analyses. Data of 5 923 children with DCD were included (59.8% boys) and 23 619 Typically Developing (TD) children (45.8% boys). The mean (SD) age of the DCD group was 10.3y (1.2) and 9.3y (1.3) for the TD children. Moderate evidence was found for motor performance, executive functions, sensory processing and perceptions, cognitive functions and sports and leisure activities to be affected in children with DCD.</p><p><strong>Conclusion: </strong>Differences between the two groups varied per domain of functioning. This emphasizes the diversity present within children with DCD and provides a rationale for explaining the heterogeneity in this patient group. Yet, results highlight the potential involvement of all these domains and call for clinicians to be alert not only to examine motor skill difficulties but also other aspects of function. Results indicate the need to develop an individualized pre-intervention multi-dimensional assessment profile for each child with DCD. It also supports the important role that clinicians play in an interdisciplinary team to tackle the difficulties encountered by children with DCD.</p>","PeriodicalId":8934,"journal":{"name":"Biomedical Journal","volume":" ","pages":"100768"},"PeriodicalIF":4.1,"publicationDate":"2024-07-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141733499","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Basic implications on three pathways associated with SARS-CoV-2. 与 SARS-CoV-2 有关的三条途径的基本含义。
IF 4.1 3区 医学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-07-14 DOI: 10.1016/j.bj.2024.100766
Jong Hoon Lee, Consolato Sergi, Richard E Kast, Badar A Kanwar, Jean Bourbeau, Sangsuk Oh, Mun-Gi Sohn, Chul Joong Lee, Michael D Coleman

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) interacts between the host and virus and govern induction, resulting in multiorgan impacts. Its pathophysiology involves the followings: 1) the angiotensin-converting enzyme (ACE2) and Toll-like receptor (TLR) pathways: 2) the neuropilin (NRP) pathway: 3) the spike protein pathway. Therefore, it is necessary to block the pathological course with modulating innate lymphoid cells against diverse corona variants in the future.

严重急性呼吸系统综合症冠状病毒 2(SARS-CoV-2)在宿主和病毒之间相互作用并进行诱导,造成多器官影响。其病理生理学涉及以下几个方面:1) 血管紧张素转换酶(ACE2)和 Toll 样受体(TLR)途径:2) 神经蛋白(NRP)途径:3) 穗状蛋白途径。因此,今后有必要通过调节先天性淋巴细胞来阻断病理过程,以抵御各种日冕变异体。
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引用次数: 0
Activating transcription factor 3 is an antitumor gene synergizing with growth differentiation factor 15 to modulate cell growth in human bladder cancer. 激活转录因子 3 是一种抗肿瘤基因,可与生长分化因子 15 协同调节人类膀胱癌细胞的生长。
IF 4.1 3区 医学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-06-26 DOI: 10.1016/j.bj.2024.100756
Syue-Ting Chen, Kang-Shuo Chang, Wei-Yin Lin, Shu-Yuan Hsu, Hsin-Ching Sung, Yu-Hsiang Lin, Tsui-Hsia Feng, Chen-Pang Hou, Horng-Heng Juang

Background: The functions of activating transcription factor 3 (ATF3) within the human bladder remain unexplored. This study delves into the expressions, functions, and regulatory mechanisms of ATF3 in human bladder cancer.

Material and methods: Gene expressions were determined by immunoblot, RT-qPCR, and reporter assays. Assays of Ki67, colony formation, Matrigel invasion, and the xenograft animal study were used to assess the cell proliferation, invasion, and tumorigenesis in vitro and in vivo. Silico analysis from TCGA database examined the correlations between GDF15 and ATF3 expressions, clinicopathologic features, and progression-free survival rates.

Results: Silico analysis confirmed that ATF3 is an antitumor gene, and the expression positively correlates with GDF15 in bladder cancer tissues. Multivariate analysis revealed that low ATF3/GDF15 but not a single low expression of ATF3 is an independent prognostic factor for progression-free survival of bladder cancer patients. Ectopic overexpression of ATF3 downregulated cell proliferation and invasion in bladder cancer cells in vitro, while ATF3-knockdown reversed these results. Knockdown of ATF3 upregulated EMT markers to enhance cell invasion in vitro and downregulated GDF15, NDRG1, and KAI-1 to elevate tumor growth in vivo. The activation of metformin on ATF3 and GDF15 in bladder cancer cells was blocked by SB431542, a TGFβ receptor inhibitor. ATF3 positively regulated GDF15 expression in bladder cancer cells through a feedback loop.

Conclusions: Our results identify that ATF3 is a metformin-upregulated antitumor gene. Results of Silico analysis align with cell-based studies suggesting that low ATF3/GDF15 could be a negative prognostic marker for bladder cancer.

背景:活化转录因子3(ATF3)在人类膀胱中的功能仍有待探索。本研究探讨了 ATF3 在人类膀胱癌中的表达、功能和调控机制:通过免疫印迹、RT-qPCR 和报告基因检测确定基因表达。Ki67、集落形成、Matrigel侵袭和异种动物实验用于评估体外和体内的细胞增殖、侵袭和肿瘤发生。来自TCGA数据库的Silico分析检验了GDF15和ATF3表达、临床病理特征和无进展生存率之间的相关性:结果:Silico分析证实,ATF3是一种抗肿瘤基因,其在膀胱癌组织中的表达与GDF15呈正相关。多变量分析显示,ATF3/GDF15的低表达是膀胱癌患者无进展生存期的独立预后因素,而非单一的低表达。体外异位过表达 ATF3 会降低膀胱癌细胞的增殖和侵袭,而敲除 ATF3 则会逆转这些结果。敲除ATF3会上调EMT标记物,从而增强体外细胞侵袭,并下调GDF15、NDRG1和KAI-1,从而促进体内肿瘤生长。二甲双胍对膀胱癌细胞中ATF3和GDF15的激活作用被TGFβ受体抑制剂SB431542阻断。ATF3通过反馈环路正向调节膀胱癌细胞中GDF15的表达:我们的研究结果表明,ATF3 是二甲双胍上调的抗肿瘤基因。Silico分析结果与基于细胞的研究结果一致,表明低ATF3/GDF15可能是膀胱癌的一个负面预后标志。
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引用次数: 0
Liver transplantation for advanced hepatocellular carcinoma: Controversy over portal vein tumor thrombosis. 晚期肝细胞癌肝移植:关于门静脉肿瘤血栓的争议。
IF 4.1 3区 医学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-06-26 DOI: 10.1016/j.bj.2024.100757
Kun-Ming Chan, Wei-Chen Lee

Liver transplantation (LT) is considered the ideal treatment for hepatocellular carcinoma (HCC) concurrent with underlying cirrhotic liver disease. As well-known, LT for HCC based on the Milan criteria has shown satisfactory outcomes. However, numerous expanded transplantation criteria were proposed to benefit more patients for LT and showed comparable survivals as well. In addition, a modest expansion of transplantation criteria for HCC may be acceptable on the basis of the consensus within the transplantation community. Nonetheless, LT in patients with advanced HCC and portal vein tumor thrombosis (PVTT) recently has received attention and has been reported by many transplantation centers despite being contraindicated. Of those, the LT outcomes in certain HCC patients with PVTT were favorable. Additionally, the advancement of multimodality treatments and the evolution of systemic therapies have emerged as promising therapeutic options for downstaging advanced HCC prior to LT. Somehow, advanced HCC with PVTT could be downstaged to become eligible for LT through these multidisciplinary approaches. Although the available evidence of LT for HCC with PVTT is limited, it is hoped that LT may soon be more widely indicated for these patients. Nevertheless, several unknown factors associated with LT for HCC remain to be explored. Herein, this review aimed to update the developments in LT for patients with advanced HCC.

肝移植(LT)被认为是治疗并发肝硬化的肝细胞癌(HCC)的理想方法。众所周知,以米兰标准为基础的肝癌LT治疗效果令人满意。然而,为了让更多患者受益于LT治疗,许多扩大移植标准被提出,并显示出相当的存活率。此外,根据移植界的共识,适度扩大 HCC 移植标准也是可以接受的。尽管如此,晚期 HCC 和门静脉肿瘤血栓形成(PVTT)患者的 LT 近来受到了关注,尽管有禁忌症,但许多移植中心仍有相关报道。其中,某些伴有门静脉瘤栓形成的 HCC 患者的 LT 结果良好。此外,多模式疗法的发展和全身疗法的演变已成为在 LT 前对晚期 HCC 进行分期的有前途的治疗方案。通过这些多学科方法,晚期HCC伴PVTT患者可以通过降期治疗获得LT治疗资格。尽管现有证据表明LT治疗伴有PVTT的HCC的效果有限,但我们希望LT能在不久的将来更广泛地应用于这些患者。尽管如此,仍有一些与 HCC LT 相关的未知因素有待探索。本综述旨在介绍晚期 HCC 患者 LT 的最新进展。
{"title":"Liver transplantation for advanced hepatocellular carcinoma: Controversy over portal vein tumor thrombosis.","authors":"Kun-Ming Chan, Wei-Chen Lee","doi":"10.1016/j.bj.2024.100757","DOIUrl":"https://doi.org/10.1016/j.bj.2024.100757","url":null,"abstract":"<p><p>Liver transplantation (LT) is considered the ideal treatment for hepatocellular carcinoma (HCC) concurrent with underlying cirrhotic liver disease. As well-known, LT for HCC based on the Milan criteria has shown satisfactory outcomes. However, numerous expanded transplantation criteria were proposed to benefit more patients for LT and showed comparable survivals as well. In addition, a modest expansion of transplantation criteria for HCC may be acceptable on the basis of the consensus within the transplantation community. Nonetheless, LT in patients with advanced HCC and portal vein tumor thrombosis (PVTT) recently has received attention and has been reported by many transplantation centers despite being contraindicated. Of those, the LT outcomes in certain HCC patients with PVTT were favorable. Additionally, the advancement of multimodality treatments and the evolution of systemic therapies have emerged as promising therapeutic options for downstaging advanced HCC prior to LT. Somehow, advanced HCC with PVTT could be downstaged to become eligible for LT through these multidisciplinary approaches. Although the available evidence of LT for HCC with PVTT is limited, it is hoped that LT may soon be more widely indicated for these patients. Nevertheless, several unknown factors associated with LT for HCC remain to be explored. Herein, this review aimed to update the developments in LT for patients with advanced HCC.</p>","PeriodicalId":8934,"journal":{"name":"Biomedical Journal","volume":" ","pages":"100757"},"PeriodicalIF":4.1,"publicationDate":"2024-06-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141466004","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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