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Cardiac pulse transfer along the cerebral microvascular network captured by laser speckle contrast imaging. 激光散斑对比成像捕获的沿大脑微血管网络的心脏脉冲转移。
IF 3.2 2区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-12-12 eCollection Date: 2026-01-01 DOI: 10.1364/BOE.578846
Rasmus Juul Jensen, Mia Viuf Skøtt, Dmitry D Postnov

Detecting subtle alterations in cardiac pulse transmission through the cerebral microvascular network could provide a new avenue for characterising cerebral microvascular health and aid in the research and diagnosis of related neurological pathologies. We used laser speckle contrast imaging to quantify the pulse waveform in cerebral microvasculature in awake and anaesthetised mice. Pulse amplitude was attenuated more efficiently in awake mice, with venular pulsatility index 63% lower than arterial, compared to a 9% and 30% reduction under isoflurane and ketamine-xylazine, respectively. Arterial-to-venous delay was similar when awake and under isoflurane (5.3±1.6 and 5.4±1 ms) but longer under ketamine-xylazine (10.3±1.7 ms).

通过大脑微血管网络检测心脏脉冲传输的细微变化,可以为表征大脑微血管健康提供新的途径,并有助于相关神经系统疾病的研究和诊断。采用激光散斑对比成像技术对清醒和麻醉小鼠的脑微血管脉冲波形进行定量分析。清醒小鼠的脉冲振幅衰减更有效,静脉搏动指数比动脉搏动指数低63%,而异氟醚和氯胺酮-二嗪分别降低9%和30%。醒时和异氟醚下的动-静脉延迟时间相似(5.3±1.6和5.4±1 ms),但氯胺酮-噻嗪组的延迟时间更长(10.3±1.7 ms)。
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引用次数: 0
Deep ultraviolet ultrashort laser pulses for precise ablation of soft biological tissue. 用于软组织精确消融的深紫外超短激光脉冲。
IF 3.2 2区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-12-10 eCollection Date: 2026-01-01 DOI: 10.1364/BOE.578629
Tatiana K Malikova, Rainer J Beck, Timothy P Frazer, Paul M Brennan, Kevin Dhaliwal, Robert R Thomson, Jonathan D Shephard

Laser ablation offers the potential for precisely removing pathological tissue without damaging surrounding healthy structures. Among the existing laser types, deep ultraviolet ultrashort pulsed lasers offer the highest axial precision and reduced collateral damage, yet their application for ablating soft tissues apart from the cornea remains underexplored. Here, ablation of ex vivo lamb liver using laser pulses at 206 nm wavelength and 250 fs pulse duration is investigated. Laser parameters that enable clean, controlled tissue removal are identified by systematically varying the laser pulse energy, spot size, and pulse repetition rate, and the ablated tissues are analysed using histological analysis and surface profilometry. With optimised settings, tissue removal with axial precision down to 10 microns is demonstrated. Ablation threshold fluence of 38.7 ± 2.1 mJ·cm-2 is determined for lamb liver tissue, and fluence windows yielding precise ablation with no observable collateral damage are defined for different laser spot sizes. The ablation responses of tissues with different physical properties are also investigated. These results advance understanding of laser-tissue interaction in the deep ultraviolet ultrashort pulse regime and demonstrate the potential of the proposed tissue removal method for high-precision surgical applications.

激光消融提供了精确去除病理组织而不损害周围健康结构的潜力。在现有的激光类型中,深紫外超短脉冲激光提供最高的轴向精度和减少附带损伤,但它们在除角膜以外的软组织消融方面的应用仍未得到充分探索。本文研究了在206nm波长和250fs脉冲持续时间下激光对离体羊肝脏的消融。通过系统地改变激光脉冲能量、光斑大小和脉冲重复率,确定能够清洁、可控地去除组织的激光参数,并使用组织学分析和表面轮廓术分析消融组织。通过优化设置,组织去除轴向精度低至10微米。确定了羊肝组织的消融阈值影响范围为38.7±2.1 mJ·cm-2,并确定了不同激光光斑尺寸下实现精确消融且无明显附带损伤的影响窗口。研究了不同物理性质组织的消融响应。这些结果促进了对深紫外超短脉冲下激光与组织相互作用的理解,并证明了所提出的组织去除方法在高精度手术应用中的潜力。
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引用次数: 0
Stiles-Crawford effect in infrared two-photon vision. 红外双光子视觉中的Stiles-Crawford效应。
IF 3.2 2区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-12-10 eCollection Date: 2026-01-01 DOI: 10.1364/BOE.581133
Xinyu Wang, Silvestre Manzanera, Juan Tabernero, Pablo Artal

Pulsed IR light can be perceived as visible through a non-linear two-photon (2P) absorption process. Similar to visible light, the Stiles-Crawford effect of the first kind (SCE-I) predicts that the perceived brightness in 2P vision depends on the location of the incoming beam in the pupil. This study compared the SC effect intensity for both visible and IR light. The average (±1 SD) characteristic directionality parameter obtained from 11 participants was 0.080 ± 0.049 mm-2 for the IR light and 0.059 ± 0.016 mm-2 for the visible light. The mean difference was 0.021 ± 0.039 mm-2 (95% CI: [-0.005, 0.047]) with a p-value of 0.11, suggesting similar photoreceptor directionality responses to both conventional one-photon and 2P excitation.

脉冲红外光可以通过非线性双光子(2P)吸收过程被感知为可见。与可见光类似,第一类斯蒂尔斯-克劳福德效应(SCE-I)预测2P视觉的感知亮度取决于入射光束在瞳孔中的位置。本研究比较了可见光和红外光的SC效应强度。11名受试者的特征方向性参数平均(±1 SD)为红外光0.080±0.049 mm-2,可见光0.059±0.016 mm-2。平均差值为0.021±0.039 mm-2 (95% CI: [-0.005, 0.047]), p值为0.11,表明在常规单光子和2P激励下,光感受器的方向性响应相似。
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引用次数: 0
Sub-50-femtosecond gain-managed amplified pulses enhance nonlinear ablation efficiency. 50飞秒以下的增益管理放大脉冲提高了非线性烧蚀效率。
IF 3.2 2区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-12-10 eCollection Date: 2026-01-01 DOI: 10.1364/BOE.582102
Liam J Price, Kai Zhang, Nicholas J Otero, Paul Repgen, Pablo A Valdes, Frank Wise, Fatih Ömer Ilday, Bryan Q Spring

Nonlinear femtosecond (fs) laser ablation enables highly localized energy deposition for cell microsurgery. Conventional systems operate at either low (∼1 kHz, amplified µJ pulse energy) or high (∼80 MHz, unamplified low nJ) repetition rates, but intermediate rates with amplified pulse energy offer a promising balance of ablation speed and thermal control. We custom-built a low-cost, 32 MHz femtosecond fiber laser system with gain-managed nonlinear amplification, boosting pulse energy from 5 to 90 nJ while compressing pulse duration to 46 fs. In this intermediate-repetition-rate regime, the use of sub-50-fs pulses enhances ablation efficiency by strengthening multiphoton absorption and lowering the effective ablation threshold, while also leveraging multi-pulse incubation effects that promote cumulative energy deposition at reduced per-pulse energies. Compared to 200-500 fs pulses typically used for ablation, shorter durations double ablation efficiency in silicon and yield a ∼10× increase in cell membrane damage. In 3D tumor models, this approach enables targeted subsurface ablation up to 400 µm depth with 6 nJ pulse energy. These results inform the design of next-generation femtosecond laser systems for microsurgery.

非线性飞秒(fs)激光消融为细胞显微手术提供了高度定位的能量沉积。传统的系统工作在低(~ 1 kHz,放大的µJ脉冲能量)或高(~ 80 MHz,未放大的低nJ)重复率,但放大脉冲能量的中间速率提供了一个有希望的烧蚀速度和热控制的平衡。我们定制了一个低成本的32 MHz飞秒光纤激光系统,具有增益管理的非线性放大,将脉冲能量从5 nJ提高到90 nJ,同时将脉冲持续时间压缩到46 fs。在这种中等重复速率下,使用低于50秒的脉冲通过加强多光子吸收和降低有效烧蚀阈值来提高烧蚀效率,同时还利用多脉冲孵育效应,在降低每脉冲能量的情况下促进累积能量沉积。与通常用于烧蚀的200-500 fs脉冲相比,较短的持续时间使硅的烧蚀效率提高了一倍,并使细胞膜损伤增加了10倍。在3D肿瘤模型中,该方法能够以6 nJ脉冲能量实现深度达400 μ m的靶向地下消融。这些结果为下一代显微外科飞秒激光系统的设计提供了信息。
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引用次数: 0
Optical characterization of ocular collagen microstructure and anisotropy in animal and human eyes. 动物和人眼眼胶原结构和各向异性的光学表征。
IF 3.2 2区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-12-09 eCollection Date: 2026-01-01 DOI: 10.1364/BOE.581592
Zhenli Lin, Haiyang Li, Zhi Zeng, Yuxi Wang, Rui Hu, Junle Qu, Liwei Liu, Binglin Shen

Second-harmonic generation (SHG) microscopy enabled label-free, high-resolution visualization of ocular collagen structures in mouse, rabbit, and human pterygium tissues. Quantitative analyses using fast Fourier transform (FFT), gray-level co-occurrence matrix (GLCM), and polarization-resolved SHG revealed regional variations in collagen alignment, texture anisotropy, and optical polarization dependence. The results demonstrate that SHG imaging can sensitively capture microstructural organization and pathological remodeling within corneal and conjunctival tissues. This study highlights the potential of SHG microscopy as a powerful noninvasive technique for quantitative assessment of collagen integrity and early detection of structural abnormalities in ocular diseases.

二次谐波生成(SHG)显微镜使小鼠、兔和人翼状胬肉组织的眼胶原结构无标记、高分辨率可视化成为可能。使用快速傅里叶变换(FFT)、灰度共生矩阵(GLCM)和偏振分辨SHG进行定量分析,揭示了胶原排列、纹理各向异性和光学偏振依赖性的区域差异。结果表明,SHG成像可以灵敏地捕捉角膜和结膜组织的显微结构组织和病理重塑。这项研究强调了SHG显微镜作为一种强大的无创技术的潜力,可以定量评估胶原完整性和早期发现眼部疾病的结构异常。
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引用次数: 0
High-throughput spontaneous Raman imaging of biological specimens with water background reduction. 水背景还原生物标本的高通量自发拉曼成像。
IF 3.2 2区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-12-08 eCollection Date: 2026-01-01 DOI: 10.1364/BOE.578769
Tomoaki Okumura, Yasuaki Kumamoto, Nicholas Isaac Smith, Katsumasa Fujita

In multiline-illumination Raman microscopy, background signals from the out-of-focus planes limit the throughput of cell imaging. Here, we improved the throughput of cell imaging by reducing background signals originating from the sample buffer solution and immersion medium of the objective lens. The background from water was suppressed by restricting the thickness of the sample buffer layer. In addition, the background signal in the CH stretching region was suppressed by replacing H2O with D2O as the immersion medium. These approaches successfully decreased background signals by 75%, enabling the same signal-to-noise ratio with a 2.2-fold shorter exposure time in cell imaging. Finally, we demonstrated high-throughput Raman imaging by visualizing bead uptake in living macrophages, successfully capturing 80 cells per frame within 3 min.

在多线照明拉曼显微镜中,来自失焦平面的背景信号限制了细胞成像的吞吐量。在这里,我们通过减少来自样品缓冲溶液和物镜浸泡介质的背景信号来提高细胞成像的吞吐量。通过限制样品缓冲层的厚度来抑制来自水的背景。此外,用D2O代替H2O作为浸渍介质抑制了CH拉伸区的背景信号。这些方法成功地将背景信号减少了75%,使细胞成像的信噪比保持不变,曝光时间缩短了2.2倍。最后,我们展示了高通量拉曼成像,通过可视化巨噬细胞珠摄取,成功地在3分钟内每帧捕获80个细胞。
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引用次数: 0
Diffusion prior-based zero-shot denoising for real-world fluorescence microscopy images via encoder-decoder guided sampling. 基于扩散先验的基于编码器-解码器引导采样的真实荧光显微镜图像零采样去噪。
IF 3.2 2区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-12-08 eCollection Date: 2026-01-01 DOI: 10.1364/BOE.578464
Qinxuan Luo, Ziwen Liu, Ge Yang

Fluorescence microscopy is an important imaging technique for biological research and applications. However, owing to various constraints in its engineering implementation and image acquisition, the acquired images often suffer from substantial noise. Although many denoising methods have been proposed, their applicability is limited by the distinct properties of fluorescence microscopy images. In particular, in real-world applications, it is often challenging and sometimes infeasible to acquire a large number of paired noisy-clean images for supervised training, and it is impractical to parameterize and estimate all types of real-world noise distributions. We propose ED-Diff, a zero-shot denoising algorithm based on diffusion priors. ED-Diff integrates the optimization solution of inverse problems with the diffusion sampling process and introduces a noisy image transformation module (NiTM) with an encoder-decoder structure to handle real-world noise scenarios. Extensive experiments on multiple real-world datasets validated the effectiveness of NiTM, demonstrating that ED-Diff exhibits competitive and robust performance.

荧光显微镜是生物学研究和应用的重要成像技术。然而,由于其工程实现和图像采集的各种限制,所获取的图像往往存在较大的噪声。虽然已经提出了许多去噪方法,但它们的适用性受到荧光显微镜图像独特特性的限制。特别是,在实际应用中,获取大量配对的无噪声图像用于监督训练通常是具有挑战性的,有时是不可行的,并且参数化和估计所有类型的实际噪声分布是不切实际的。提出了一种基于扩散先验的零采样去噪算法ED-Diff。ED-Diff将逆问题的优化解与扩散采样过程相结合,并引入了带有编码器-解码器结构的噪声图像变换模块(NiTM)来处理现实世界的噪声场景。在多个真实数据集上进行的大量实验验证了NiTM的有效性,表明ED-Diff具有竞争力和鲁棒性。
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引用次数: 0
Adaptive optics stimulated Raman scattering microscopy for topical product pharmacokinetic imaging. 局部产品药代动力学成像的自适应光学刺激拉曼散射显微镜。
IF 3.2 2区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-12-08 eCollection Date: 2026-01-01 DOI: 10.1364/BOE.576409
Saara K Luna, Benjamin A Kuzma, Nick-Sidney Lemberger, Kristin Wallmeier, Carsten Fallnich, Conor L Evans

Topically applied drug products are used to treat various dermatological conditions, enabling local and targeted delivery of active pharmaceutical ingredients. To ensure appropriate topical drug efficacy and delivery, it is necessary to understand the pharmacokinetics of topical drug uptake. Stimulated Raman scattering (SRS) microscopy, a chemically specific imaging modality, is well-suited to quantitatively measure the spatiotemporal kinetics of topical drug permeation in skin. However, SRS imaging depth in skin is often limited due to skin heterogeneity and scattering effects, distorting the laser focus and reducing the SRS signal. Adaptive optics (AO) can help overcome and correct depth limitations by adjusting wavefront shape and improving laser focus with a programmable optical element, such as a deformable membrane mirror. Previous work has demonstrated the use of AO in optimizing coherent anti-Stokes Raman scattering (CARS) signal in tissue imaging. In this study, we evaluated the ability of AO to improve the SRS signal in tissue imaging using a deformable membrane mirror as the AO element, which utilized a simulated annealing algorithm to search for mirror shapes producing optimal SRS signal at different tissue imaging depths. AO SRS images had an 11% increase in SRS signal intensity and >350% increase in image contrast between high and low signal regions compared to non-AO SRS images in nude mouse ear skin at the same depth. Mirror shapes optimized at greater imaging depths produced increased SRS intensity and contrast for a range of imaging depths (up to 290 μm in chicken muscle). Using AO SRS, we performed time-lapse imaging of ruxolitinib uptake in ex vivo human skin, demonstrating that AO SRS can be used to quantitatively measure topical drug pharmacokinetics in deeper skin structures (>100 μm).

局部应用的药物产品用于治疗各种皮肤病,使活性药物成分能够局部和靶向递送。为了确保适当的局部药物疗效和递送,有必要了解局部药物摄取的药代动力学。受激拉曼散射(SRS)显微镜是一种化学特异性成像方式,非常适合于定量测量皮肤局部药物渗透的时空动力学。然而,由于皮肤的非均匀性和散射效应,SRS在皮肤中的成像深度往往受到限制,从而扭曲了激光聚焦,降低了SRS信号。自适应光学(AO)可以通过调整波前形状和使用可编程光学元件(如可变形膜镜)改善激光聚焦来帮助克服和纠正深度限制。以前的工作已经证明了AO在组织成像中优化相干反斯托克斯拉曼散射(CARS)信号中的使用。在本研究中,我们使用可变形膜镜作为AO单元,评估AO在组织成像中改善SRS信号的能力,该单元利用模拟退火算法搜索在不同组织成像深度下产生最佳SRS信号的镜像形状。在相同深度的裸鼠耳皮肤上,与非AO SRS图像相比,AO SRS图像的SRS信号强度增加了11%,高信号区和低信号区图像对比度增加了bb50 %。在更大成像深度下优化的镜像形状可以提高SRS强度和成像深度范围(在鸡肌肉中高达290 μm)的对比度。使用AO SRS,我们对ruxolitinib在离体人体皮肤中的摄取进行了延时成像,证明AO SRS可用于定量测量深层皮肤结构(>100 μm)的局部药物药代动力学。
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引用次数: 0
Translational photoacoustic and ultrasound imaging catheter for characterizing gastrointestinal inflammation and fibrosis: a study with a pig model in vivo. 翻译光声和超声成像导管表征胃肠道炎症和纤维化:猪体内模型的研究。
IF 3.2 2区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-12-04 eCollection Date: 2026-01-01 DOI: 10.1364/BOE.577556
Yaocai Huang, Laura A Johnson, Xiaorui Peng, Yao Lee, Xueding Wang, Peter D R Higgins, Guan Xu

Our previous studies demonstrated that a prototype photoacoustic (PA) and ultrasound (US) imaging catheter can differentiate intestinal inflammation and fibrosis. However, its compatibility with clinical endoscopic procedures has not been validated. Here, we present a translational PA-US dual-modality imaging catheter with a reduced diameter to fit the biopsy channel of standard adult colonoscopes and therapeutic upper endoscopes (∼3.7 mm). The catheter integrates an angle-tipped optical fiber (600-µm core) for PA illumination and a miniaturized 48-element ultrasound array operating at a center frequency of ∼9 MHz for signal reception. These components are enclosed in a hydrostatic balloon (12 mm diameter, 15 mm length when fully inflated) to ensure acoustic coupling with the intestinal lumen. The system was upgraded from our previous setup by incorporating a more portable optical parametric oscillator (OPO) laser and a Verasonics imaging platform. The imaging catheter was positioned at the disease locations in a pig model of esophageal fibrosis induced by argon plasma coagulation (APC). Multi-wavelength PA imaging and US imaging were performed to resolve the tissue components. The results demonstrate the catheter's ability to assess inflammation and fibrosis in the gastrointestinal tract during a standard clinical endoscopy procedure.

我们之前的研究表明,原型光声(PA)和超声(US)成像导管可以区分肠道炎症和纤维化。然而,其与临床内镜手术的相容性尚未得到验证。在这里,我们提出了一种缩小直径的平移PA-US双模成像导管,以适应标准成人结肠镜和治疗性上内窥镜的活检通道(~ 3.7 mm)。该导管集成了用于PA照明的角端光纤(600µm芯)和用于信号接收的中心频率为~ 9 MHz的小型化48元超声阵列。这些部件被包裹在一个静压球囊(直径12毫米,完全充气时长度15毫米)中,以确保与肠腔的声学耦合。该系统在之前的基础上进行了升级,加入了一个更便携的光学参量振荡器(OPO)激光器和一个Verasonics成像平台。将显像导管定位于氩等离子凝固(APC)诱导的猪食管纤维化模型的病变部位。采用多波长PA显像和US显像分析组织成分。结果证明导管在标准临床内镜检查过程中评估胃肠道炎症和纤维化的能力。
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引用次数: 0
Hybrid particle-wave Monte Carlo OCT simulation method provides a three orders of magnitude improvement in efficiency. 混合粒子波蒙特卡罗OCT模拟方法的效率提高了三个数量级。
IF 3.2 2区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-12-04 eCollection Date: 2026-01-01 DOI: 10.1364/BOE.572256
Gijs Buist, Arjen Amelink, Johannes F de Boer

The attenuation coefficient of biological tissue could serve as an indicator of structural and functional changes related to the onset or progression of disease. Optical coherence tomography (OCT) provides cross-sectional images of tissue up to a depth of a few millimeters, based on the local backscatter properties. Monte Carlo (MC) simulations are ideally suited to investigate and improve OCT attenuation coefficient extraction in confounding cases of (low-order) multiple scattering and inclusions such as blood vessels. However, current MC methods are time-consuming due to the OCT detection configuration rejecting many of the backscattered photons. In this work, we present two MC OCT detection models, a conventional photon detection model and a hybrid particle-wave detection model based on spherical waves from a photon's last scatter position, and compare their simulation efficiency by comparing the SNR of the resulting depth profiles for equal conditions and number of simulated photons. We find a three orders of magnitude increase in the simulation efficiency for the hybrid particle-wave model compared to the conventional photon detection model. Both models show excellent agreement with single-scatter theory for weakly scattering samples. Additionally, we use the hybrid particle-wave model to simulate experimentally measured samples with 0.1 mm-1µ s  ≤ ~4.5 mm-1. The resulting simulated depth profiles show excellent agreement with the experimental depth profiles, even in those cases where the single-scatter theory model fails to describe the experimental depth profiles accurately.

生物组织的衰减系数可以作为与疾病发生或进展相关的结构和功能变化的指标。光学相干断层扫描(OCT)基于局部后向散射特性,可提供深度达几毫米的组织横截面图像。蒙特卡罗(MC)模拟非常适合研究和改进(低阶)多重散射和夹杂物(如血管)混杂情况下OCT衰减系数的提取。然而,由于OCT检测配置拒绝了许多背散射光子,目前的MC方法非常耗时。在这项工作中,我们提出了两种MC OCT检测模型,一种是传统的光子检测模型,另一种是基于光子最后散射位置的球形波的混合粒子波检测模型,并通过比较在相同条件和模拟光子数量下得到的深度剖面的信噪比来比较它们的模拟效率。我们发现混合粒子波模型的模拟效率比传统的光子探测模型提高了三个数量级。对于弱散射样品,两种模型都与单散射理论非常吻合。此外,我们使用混合粒子波模型模拟了0.1 mm-1≤µs≤~4.5 mm-1的实验测量样品。结果表明,即使在单散射理论模型不能准确描述实验深度剖面的情况下,模拟深度剖面与实验深度剖面具有良好的一致性。
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Biomedical optics express
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