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Efficacy of Combination of Antiviral Therapy With Neutralizing Monoclonal Antibodies for Recurrent Persistent SARS-CoV-2 Pneumonia in Patients With Lymphoma. 抗病毒疗法与中和单克隆抗体联合治疗淋巴瘤患者复发性持续性SARS-CoV-2肺炎的疗效。
IF 2.6 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-08-06 eCollection Date: 2024-01-01 DOI: 10.1155/2024/8182887
Xiaoyan Gai, Xiaoyan Sun, Beibei Liu, Wei Yan, Zikang Sheng, Qingtao Zhou, Yongchang Sun

Despite the potential of neutralizing antibodies in the management of severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2), clinical research on its efficacy in Chinese patients remains limited. This study is aimed at investigating the therapeutic effect of combination of antiviral therapy with neutralizing monoclonal antibodies for recurrent persistent SARS-CoV-2 pneumonia in patients with lymphoma complicated by B cell depletion. A prospective study was conducted on Chinese patients who were treated with antiviral nirmatrelvir/ritonavir therapy and the neutralizing antibody tixagevimab-cilgavimab (tix-cil). The primary outcome was the rate of recurrent SARS-CoV-2 infection. Five patients with lymphoma experienced recurrent SARS-CoV-2 pneumonia and received tix-cil treatment. All patients had a history of CD20 monoclonal antibody use within the year preceding SARS-CoV-2 infection, and two patients also had a history of Bruton's tyrosine kinase (BTK) inhibitor use. These patients had notably low lymphocyte counts and exhibited near depletion of B cells. All five patients tested negative for serum SARS-CoV-2 IgG and IgM antibodies. None of the patients developed reinfection with SARS-CoV-2 pneumonia after antiviral and tix-cil treatment during the 6-month follow-up period. In conclusion, the administration of antiviral and SARS-CoV-2-neutralizing antibodies showed encouraging therapeutic efficacy against SARS-CoV-2 pneumonia in patients with lymphoma complicated by B cell depletion, along with the potential preventive effect of neutralizing antibodies for up to 6 months.

尽管中和抗体在治疗严重急性呼吸系统综合征冠状病毒-2(SARS-CoV-2)方面具有潜力,但有关其在中国患者中疗效的临床研究仍然有限。本研究旨在探讨抗病毒治疗与中和单克隆抗体联合应用对因B细胞耗竭而并发淋巴瘤的反复持续性SARS-CoV-2肺炎患者的治疗效果。这项前瞻性研究针对接受抗病毒药物尼马瑞韦/利托那韦治疗和中和抗体替沙吉单抗-替加维单抗(tix-cil)治疗的中国患者。主要结果是 SARS-CoV-2 感染的复发率。五名淋巴瘤患者复发了SARS-CoV-2肺炎,并接受了tix-cil治疗。所有患者在感染 SARS-CoV-2 前一年内都曾使用过 CD20 单克隆抗体,其中两名患者还曾使用过布鲁顿酪氨酸激酶 (BTK) 抑制剂。这些患者的淋巴细胞数量明显偏低,B 细胞几乎耗竭。五名患者的血清 SARS-CoV-2 IgG 和 IgM 抗体检测结果均为阴性。在 6 个月的随访期间,经过抗病毒和 tix-cil 治疗后,没有一名患者再次感染 SARS-CoV-2 肺炎。总之,对于因 B 细胞耗竭而并发淋巴瘤的患者,抗病毒药物和 SARS-CoV-2 中和抗体对 SARS-CoV-2 肺炎有令人鼓舞的疗效,而且中和抗体还具有长达 6 个月的潜在预防效果。
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引用次数: 0
Snakebites and Antisnake Venom Utilization in Ghana's Oti Region: A 6-Year Retrospective Study. 加纳奥蒂地区的蛇咬伤和蛇毒使用情况:一项为期 6 年的回顾性研究。
IF 2.6 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-08-06 eCollection Date: 2024-01-01 DOI: 10.1155/2024/6692421
Courage Edem Ketor, Charles Kwaku Benneh, Kofi Boamah Mensah, Emmanuel Sarkodie, Adelaide Mensah, Samuel Owusu Somuah, Selorm Akakpo, Kwame Ohene Buabeng

Background: Snakebite is a global environmental and occupational hazard and a significant public health threat. In rural areas, snakebite cases often go unreported and undocumented due to the lack of access to well-structured healthcare facilities/infrastructure. In some cases, the need for antisnake venom (ASV) far outstrips supply, negatively affecting treatment outcomes. This study, therefore, assessed the epidemiological characteristics of snakebite cases, their management, and how antivenoms are utilised at the selected hospital in the Jasikan District Hospital. Methods: A 6-year retrospective study using secondary data from antivenom return forms (pharmacy records), clinical records (patient folders), the District Health Information Management System-2 (DHIMS-2) database, and consulting room registers was carried out in selected hospitals in the Jasikan District, Oti, Ghana. Results: The predominant symptom of snakebite was localised pain (71.4%). The snakebite commonly occurred at home (19%) and on farms (18%). Of the 98 snakebite cases, ASV was administered to 73 (74.5%) cases. Supportive treatment applied included prophylactic antitetanus immunoglobulin (ATS) (80.6%), prophylactic antibiotics (63%), corticosteroids (80.6%), and analgesics (63%). 95% (n = 94) of complete recoveries were recorded; three were discharged against medical advice, and one was mortality. The supply and use of antivenom were erratic throughout the months of high incidence, partly due to inconsistent availability at the Regional Medical Stores. The average ASV vials and hospital stay duration were 1.23 ± 0.86 vials and 2.67 ± 1.97 days, respectively. Although the peak of snakebites occurs in April, May, and June, the demand for antivenom in April and May exceeded supply. Conclusion: The outcome of most snakebite case management was appropriate, irrespective of inadequate ASV supply in certain months. The erratic antivenom supply should be aligned with seasonal and facility-use patterns to enhance regional snakebite management.

背景:蛇咬伤是一种全球性的环境和职业危害,也是一种重大的公共卫生威胁。在农村地区,由于缺乏完善的医疗保健设施/基础设施,被蛇咬伤的病例往往得不到报告和记录。在某些情况下,抗蛇毒液(ASV)的需求量远远超过供应量,对治疗效果产生了负面影响。因此,本研究评估了被蛇咬伤病例的流行病学特征、其管理情况以及贾西干区医院所选医院如何使用抗蛇毒血清。研究方法利用抗蛇毒血清回执表(药房记录)、临床记录(患者文件夹)、地区健康信息管理系统-2(DHIMS-2)数据库和诊室登记簿中的二手数据,在加纳奥蒂省贾西坎地区的选定医院开展了一项为期 6 年的回顾性研究。研究结果被蛇咬伤的主要症状是局部疼痛(71.4%)。蛇咬伤通常发生在家中(19%)和农场(18%)。在 98 例蛇咬伤病例中,73 例(74.5%)接受了 ASV 治疗。辅助治疗包括预防性抗破伤风免疫球蛋白(ATS)(80.6%)、预防性抗生素(63%)、皮质类固醇(80.6%)和止痛药(63%)。据记录,95%(n = 94)的患者完全康复;三人不听医嘱出院,一人死亡。在高发病率的几个月里,抗蛇毒血清的供应和使用都不稳定,部分原因是地区医药商店的供应不稳定。抗蛇毒血清的平均瓶数和住院时间分别为 1.23 ± 0.86 瓶和 2.67 ± 1.97 天。虽然蛇咬伤的高峰期出现在四月、五月和六月,但四月和五月的抗蛇毒血清供不应求。结论尽管某些月份的抗蛇毒血清供应不足,但大多数蛇咬伤病例的处理结果是适当的。不稳定的抗蛇毒血清供应应与季节和设施使用模式保持一致,以加强区域蛇咬伤管理。
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引用次数: 0
Complete Blood Count Values Over Time in Young Children During the Dengue Virus Epidemic in the Dominican Republic From 2018 to 2020. 多米尼加共和国 2018 年至 2020 年登革热病毒流行期间幼儿全血细胞计数随时间变化的数值。
IF 2.6 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-08-03 eCollection Date: 2024-01-01 DOI: 10.1155/2024/3716786
Melissa E Day, Yonairy Collado Puello, Miguel E Mejía Sang, Elvira J Diaz Brockmans, María F Díaz Soto, Stephanie M Rivera Defilló, Karla M Taveras Cruz, Javier O Santiago Pérez, Rafael Meña, Cesár Mota, Margaret K Hostetter, Louis J Muglia, Javier Gonzalez Del Rey, Elizabeth P Schlaudecker, Lisa J Martin, Brittany N Simpson, Carlos E Prada

Background: Dengue fever (DF) is a mosquito-borne illness with substantial economic and societal impact. Understanding laboratory trends of hospitalized Dominican Republic (DR) pediatric patients could help develop screening procedures in low-resourced settings. We sought to describe laboratory findings over time in DR children with DF and DF severity from 2018 to 2020. Methods: Clinical information was obtained prospectively from recruited children with DF. Complete blood count (CBC) laboratory measures were assessed across Days 1-10 of fever. Participants were classified as DF-negative and DF-positive and grouped by severity. We assessed associations of DF severity with demographics, clinical characteristics, and peripheral blood studies. Using linear mixed-models, we assessed if hematologic values/trajectories differed by DF status/severity. Results: A total of 597 of 1101 with a DF clinical diagnosis were serologically evaluated, and 574 (471 DF-positive) met inclusion criteria. In DF, platelet count and hemoglobin were higher on earlier days of fever (p < = 0.0017). Eighty had severe DF. Severe DF risk was associated with thrombocytopenia, intraillness anemia, and leukocytosis, differing by fever day (p < = 0.001). Conclusions: In a pediatric hospitalized DR cohort, we found marked anemia in late stages of severe DF, unlike the typically seen hemoconcentration. These findings, paired with clinical symptom changes over time, may help guide risk-stratified screenings for resource-limited settings.

背景:登革热(DF)是一种由蚊子传播的疾病,对经济和社会有重大影响。了解多米尼加共和国(DR)住院儿童患者的实验室趋势有助于在资源匮乏的环境中制定筛查程序。我们试图描述 2018 年至 2020 年期间多米尼加共和国 DF 儿童的实验室结果以及 DF 的严重程度。方法:从招募的 DF 儿童中前瞻性地获取临床信息。对发热第 1-10 天的全血细胞计数 (CBC) 实验室指标进行了评估。参与者被分为 DF 阴性和 DF 阳性,并按严重程度分组。我们评估了 DF 严重程度与人口统计学、临床特征和外周血研究的关联。利用线性混合模型,我们评估了血液学值/轨迹是否因 DF 状态/严重程度而异。结果:对 1101 例 DF 临床诊断患者中的 597 例进行了血清学评估,其中 574 例(471 例 DF 阳性)符合纳入标准。在 DF 患者中,发热天数越早,血小板计数和血红蛋白越高(P < = 0.0017)。80人患有严重的DF。重度 DF 风险与血小板减少、病中贫血和白细胞减少有关,因发烧天数而异(p < = 0.001)。结论在儿科住院DR队列中,我们发现严重DF晚期会出现明显的贫血,这与通常所见的血液浓缩不同。这些发现与随着时间推移出现的临床症状变化相结合,有助于指导在资源有限的环境中进行风险分级筛查。
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引用次数: 0
Nasal Anthropometry: An Assessment Among the Akan and Ewe Ethnic Groups in Ghana. 鼻腔人体测量:加纳阿坎族和埃维族的评估。
IF 2.6 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-08-02 eCollection Date: 2024-01-01 DOI: 10.1155/2024/7508791
Juliet Robertson, Chrissie Stansie Abaidoo, Daniel Kobina Okwan, Joshua Tetteh, Collins Adjei-Antwi, Samuel Bempah, Michael Ampofo

The distribution of nasal types has been reported to be influenced by climatic adaptation as the nose is involved in conditioning inhaled air. Previous studies have reported differential nasal types and dimensions among varying populations which is very beneficial in planning for rhinoplasty and in forensic identification. However, there is inadequate data on nasal types and dimensions of the various ethnic groups in the Ghanaian population. Since it is inappropriate to apply nasal dimensions of one ethnic group to another, the current study sought to assess the nasal types and dimensions of Akans and Ewes in the Ghanaian population. Nasal height, nasal length, nasal tip protrusion, morphological nose width, and anatomical nose width were measured from 202 participants (116 Akans and 86 Ewes) aged 18-27 years belonging to the Akan and Ewe ethnic groups. Nasal index was calculated, and the frequencies of the nasal types among the two ethnic groups were determined. Ewe significantly had greater nasal length and nasal tip protrusion than the Akans. For both ethnic groups, sexual dimorphism was observed in morphological nose width and anatomical nose width, with males having greater values than females. The platyrrhine (broad nose) nasal type was predominant among the Akan and Ewe ethnic groups. The average nasal dimensions of the Akan and Ewe ethnic groups for the Ghanaian population have been reported in the present study, which will be useful in rhinoplasty intended for individuals belonging to these ethnic groups and in identification.

据报道,鼻类型的分布受气候适应性的影响,因为鼻子参与调节吸入的空气。以往的研究报告显示,不同人群的鼻腔类型和尺寸存在差异,这对规划鼻整形手术和法医鉴定非常有益。然而,关于加纳不同种族人群的鼻型和尺寸的数据并不充分。由于将一个族群的鼻部尺寸应用于另一个族群是不恰当的,因此本研究试图评估加纳人口中阿坎族和埃维族的鼻部类型和尺寸。本研究测量了 202 名年龄在 18-27 岁的阿坎族和埃维族参与者(116 名阿坎族和 86 名埃维族)的鼻高、鼻长、鼻尖突出、形态学鼻宽和解剖学鼻宽。计算了鼻指数,并确定了两个民族的鼻类型频率。埃维族的鼻长度和鼻尖突出程度明显高于阿坎族。在两个族群中,形态学上的鼻宽和解剖学上的鼻宽都存在性别二形性,男性的数值大于女性。在阿坎族和埃维族中,宽鼻型占主导地位。本研究报告了加纳人口中阿坎族和埃维族的平均鼻部尺寸,这将有助于为这两个族群的人进行鼻整形手术和识别。
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引用次数: 0
Using Advanced Convolutional Neural Network Approaches to Reveal Patient Age, Gender, and Weight Based on Tongue Images. 使用高级卷积神经网络方法,根据舌头图像揭示患者年龄、性别和体重。
IF 2.6 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-08-01 eCollection Date: 2024-01-01 DOI: 10.1155/2024/5551209
Xiaoyan Li, Li Li, Jing Wei, Pengwei Zhang, Volodymyr Turchenko, Naresh Vempala, Evgueni Kabakov, Faisal Habib, Arvind Gupta, Huaxiong Huang, Kang Lee

The human tongue has been long believed to be a window to provide important insights into a patient's health in medicine. The present study introduced a novel approach to predict patient age, gender, and weight inferences based on tongue images using pretrained deep convolutional neural networks (CNNs). Our results demonstrated that the deep CNN models (e.g., ResNeXt) trained on dorsal tongue images produced excellent results for age prediction with a Pearson correlation coefficient of 0.71 and a mean absolute error (MAE) of 8.5 years. We also obtained an excellent classification of gender, with a mean accuracy of 80% and an AUC (area under the receiver operating characteristic curve) of 88%. ResNeXt model also obtained a moderate level of accuracy for weight prediction, with a Pearson correlation coefficient of 0.39 and a MAE of 9.06 kg. These findings support our hypothesis that the human tongue contains crucial information about a patient. This study demonstrated the feasibility of using the pretrained deep CNNs along with a large tongue image dataset to develop computational models to predict patient medical conditions for noninvasive, convenient, and inexpensive patient health monitoring and diagnosis.

长期以来,人们一直认为人的舌头是一扇窗口,能为医学界提供了解病人健康状况的重要信息。本研究引入了一种新方法,利用预训练的深度卷积神经网络(CNN)根据舌头图像预测患者的年龄、性别和体重推断。我们的研究结果表明,在舌背图像上训练的深度卷积神经网络模型(如 ResNeXt)在年龄预测方面取得了出色的结果,其皮尔逊相关系数为 0.71,平均绝对误差 (MAE) 为 8.5 岁。我们还获得了出色的性别分类结果,平均准确率为 80%,AUC(接收器工作特征曲线下面积)为 88%。ResNeXt 模型对体重预测的准确率也达到了中等水平,皮尔逊相关系数为 0.39,最大误差为 9.06 千克。这些发现支持了我们的假设,即人的舌头包含有关病人的重要信息。这项研究证明了使用预训练的深度 CNN 和大型舌头图像数据集来开发预测患者病情的计算模型的可行性,从而实现无创、便捷、廉价的患者健康监测和诊断。
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引用次数: 0
Prevalence of Isthmi and Root Canal Configurations in Mandibular Permanent Teeth Using Cone-Beam Computed Tomography. 利用锥形束计算机断层扫描技术分析下颌恒牙畸形和根管配置的普遍性。
IF 2.6 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-07-31 eCollection Date: 2024-01-01 DOI: 10.1155/2024/9969860
Sherwin Arman, Ahmad Nouroloyouni, Amin Salem Milani, Behzad Sheikhfaal, Sara Noorolouny, Faraz Saleh Haghgou, Hesam Mikaieli Xiavi

While root canal anatomy in Middle Eastern populations is well-studied, research on isthmi in mandibular permanent teeth from this region is limited. This retrospective study used cone-beam computed tomography (CBCT) to examine isthmi prevalence and location, as well as root canal morphologies (per Vertucci's classification) in mandibular permanent teeth from a subpopulation in Ardabil, Iran. The study is aimed at enhancing our understanding of dental anatomical variations in Middle Eastern populations. A total of 3566 teeth from 384 CBCT scans were evaluated in this retrospective study. Mandibular teeth were evaluated on sagittal, coronal, and axial sections regarding the presence of isthmus and root morphology (Vertucci's classification). CBCT scans of 197 males (51.3%) and 187 females (48.7%) were evaluated, with a mean age of 41.1 ± 11.4 years. Isthmi were most prevalent in molar mesial roots, typically located in the middle third for anterior teeth and first premolars and cervical third for posterior teeth. While gender did not play a significant role, the presence of an isthmus in the mesial root of the left second molars was associated with a younger mean patient age (p < 0.05). Root morphology varied across tooth types. Central and lateral incisors predominantly showed Vertucci's Types I and III. Canines and premolars were mostly Type I, with some variation. Molar mesial roots frequently exhibited Types IV and II, while distal roots were predominantly Type I. Statistically significant differences were found between morphology and gender in the first left premolar (Type I more common in women; Type V in men; p < 0.001) and in the right canine (Type I more prevalent in men; Types III and V more prevalent in women; p < 0.001). The results revealed wide variations in root canal morphology and a relatively high prevalence of isthmi in the study population. Our findings suggest a potential difference in tooth anatomy based on sex and a relationship between age and the presence of isthmi.

虽然对中东地区人群的根管解剖学研究较多,但对该地区下颌恒牙畸形的研究却很有限。这项回顾性研究使用锥束计算机断层扫描(CBCT)检查了伊朗阿尔达比勒亚群下颌恒牙根管畸形的发生率和位置,以及根管形态(根据 Vertucci 的分类)。这项研究旨在加深我们对中东人口牙齿解剖变异的了解。这项回顾性研究共评估了 384 次 CBCT 扫描中的 3566 颗牙齿。对下颌牙齿的矢状切面、冠状切面和轴切面进行了评估,以确定是否存在峡部和牙根形态(Vertucci 分类法)。对 197 名男性(51.3%)和 187 名女性(48.7%)的 CBCT 扫描结果进行了评估,他们的平均年龄为 41.1 ± 11.4 岁。畸形最常见于磨牙中根,前牙和第一前磨牙通常位于中1/3,后牙则位于颈1/3。虽然性别并不重要,但左侧第二磨牙中侧根出现峡部与患者平均年龄较小有关(p < 0.05)。不同类型牙齿的牙根形态各不相同。中切牙和侧切牙主要表现为 Vertucci's I 型和 III 型。犬齿和前臼齿大多为 I 型,但也有一些差异。左侧第一颗前臼齿(女性多为 I 型;男性多为 V 型;p < 0.001)和右侧犬齿(男性多为 I 型;女性多为 III 型和 V 型;p < 0.001)的形态与性别之间存在显著的统计学差异。研究结果表明,研究人群的根管形态差异很大,等位畸形的发生率相对较高。我们的研究结果表明,不同性别的牙齿解剖结构可能存在差异,年龄与等畸形的存在也有关系。
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引用次数: 0
Adherence to Periodic Dilated Eye Examinations and Its Determinants Among Nepalese Patients With Diagnosed Diabetes: A Single-Center Hospital-Based Analysis Using Health Belief Model. 尼泊尔确诊糖尿病患者坚持定期散瞳检查及其决定因素:使用健康信念模型的单中心医院分析。
IF 2.6 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-07-30 eCollection Date: 2024-01-01 DOI: 10.1155/2024/3231341
Barsha Suwal, Rajan Shrestha, Bijay Khatri, Madan Prasad Upadhyay

Introduction: To find the adherence rate to periodic dilated eye examinations (DEEs) and its determinants among patients with diagnosed diabetes. Research Design and Methods: In this cross-sectional study of 165 participants with diagnosed diabetes (Type 1/2) attending a general hospital with a diabetes clinic, we explored perceptions of barriers and facilitators of DEE at the individual level using a framework adapted from the health belief model (HBM). Patients were compared using t tests for continuous data and chi-square tests for categorical data. Results: The rate of adherence to DEE (as defined by DEE within a year) was 62.4% (95% confidence interval [CI] = 55.0%-69.8%). The mean age of the patients was 56.81 (±13.29) years. We found that the mean benefit score was significantly higher, and the mean barrier score was significantly lower in those adhering to DEE (p < 0.001); but the susceptibility, severity, and self-efficacy scores were not significantly different. Furthermore, those under treatment for diabetes mellitus (DM), those with diabetic retinopathy (DR) in them or their family member, and those with DM duration of 1 year or less were significantly likely to adhere to DEE (p < 0.005). Additionally, those who had received advice for eye screening from their physicians were about 25 times more likely to adhere to DEE (95% CI =6.80-92.05) than those who were not advised. Conclusion: A larger proportion of people with diabetes did not adhere to periodic DEE. Benefits and barriers were found to be determinants in this population. Further exploration in a larger population and the use of HBM to increase adherence to periodic DEE can be tested by targeting behavioral counseling along with other traditional approaches.

简介:目的调查已确诊糖尿病患者定期散瞳检查(DEE)的坚持率及其决定因素。研究设计与方法:在这项横断面研究中,我们采用健康信念模型(HBM)改编的框架,探讨了个人层面上对散瞳检查的障碍和促进因素的看法,研究对象为在一家设有糖尿病门诊的综合医院就诊的 165 名确诊糖尿病(1/2 型)患者。连续数据采用 t 检验,分类数据采用卡方检验。结果坚持 DEE 的比例(定义为一年内坚持 DEE)为 62.4%(95% 置信区间 [CI] = 55.0%-69.8%)。患者的平均年龄为 56.81 (±13.29) 岁。我们发现,坚持使用 DEE 的患者的平均获益得分明显更高,平均障碍得分明显更低(P < 0.001);但易感性、严重性和自我效能得分没有明显差异。此外,正在接受糖尿病(DM)治疗者、本人或家人患有糖尿病视网膜病变(DR)者以及糖尿病病程在 1 年或 1 年以下者坚持 DEE 的可能性明显增加(p < 0.005)。此外,接受过医生建议进行眼部筛查的人坚持进行 DEE 的可能性是未接受建议者的 25 倍(95% CI =6.80-92.05)。结论较大比例的糖尿病患者没有坚持定期进行眼健康检查。在这一人群中,益处和障碍是决定性因素。可以通过针对行为咨询和其他传统方法,在更大的人群中进行进一步探索,并测试使用 HBM 来提高定期 DEE 的依从性。
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引用次数: 0
Genomic Insights of a Methicillin-Resistant Biofilm-Producing Staphylococcus aureus Strain Isolated From Food Handlers. 从食品处理人员中分离出的耐甲氧西林生物膜金黄色葡萄球菌菌株的基因组研究。
IF 2.6 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-07-20 eCollection Date: 2024-01-01 DOI: 10.1155/2024/5516117
Fatimah Muhammad Ballah, M Nazmul Hoque, Md Saiful Islam, Golam Mahbub Faisal, Al-Muksit Mohammad Taufiquer Rahman, Mst Minara Khatun, Marzia Rahman, Jayedul Hassan, Md Tanvir Rahman

Methicillin-resistant Staphylococcus aureus (MRSA) is an important zoonotic pathogen associated with a wide range of infections in humans and animals. Thus, the emergence of MRSA clones poses an important threat to human and animal health. This study is aimed at elucidating the genomics insights of a strong biofilm-producing and multidrug-resistant (MDR) S. aureus MTR_BAU_H1 strain through whole-genome sequencing (WGS). The S. aureus MTR_BAU_H1 strain was isolated from food handlers' hand swabs in Bangladesh and phenotypically assessed for antimicrobial susceptibility and biofilm production assays. The isolate was further undergone to high throughput WGS and analysed using different bioinformatics tools to elucidate the genetic diversity, molecular epidemiology, sequence type (ST), antimicrobial resistance, and virulence gene distribution. Phenotypic analyses revealed that the S. aureus MTR_BAU_H1 strain is a strong biofilm-former and carries both antimicrobial resistance (e.g., methicillin resistance; mecA, beta-lactam resistance; blaZ and tetracycline resistance; tetC) and virulence (e.g., sea, tsst, and PVL) genes. The genome of the S. aureus MTR_BAU_H1 belonged to ST1930 that possessed three plasmid replicons (e.g., rep16, rep7c, and rep19), seven prophages, and two clustered regularly interspaced short palindromic repeat (CRISPR) arrays of varying sizes. Phylogenetic analysis showed a close evolutionary relationship between the MTR_BAU_H1 genome and other MRSA clones of diverse hosts and demographics. The MTR_BAU_H1 genome harbours 42 antimicrobial resistance genes (ARGs), 128 virulence genes, and 273 SEED subsystems coding for the metabolism of amino acids, carbohydrates, proteins, cofactors, vitamins, minerals, and lipids. This is the first-ever WGS-based study of a strong biofilm-producing and MDR S. aureus strain isolated from human hand swabs in Bangladesh that unveils new information on the resistomes (ARGs and correlated mechanisms) and virulence potentials that might be linked to staphylococcal pathogenesis in both humans and animals.

耐甲氧西林金黄色葡萄球菌(MRSA)是一种重要的人畜共患病原体,与人类和动物的多种感染有关。因此,MRSA 克隆的出现对人类和动物健康构成了重要威胁。本研究旨在通过全基因组测序(WGS)阐明一株强生物膜产生型耐多药(MDR)金黄色葡萄球菌 MTR_BAU_H1 的基因组学特征。金黄色葡萄球菌 MTR_BAU_H1 株是从孟加拉国食品从业人员的手拭子中分离出来的,并进行了抗菌药敏感性和生物膜产生测定的表型评估。分离菌株进一步进行了高通量 WGS 检测,并使用不同的生物信息学工具进行分析,以阐明其遗传多样性、分子流行病学、序列类型(ST)、抗菌药耐药性和毒力基因分布。表型分析表明,金黄色葡萄球菌 MTR_BAU_H1 菌株具有很强的生物膜形成能力,同时携带抗菌素耐药性(如甲氧西林耐药性;mecA、β-内酰胺耐药性;blaZ 和四环素耐药性;tetC)和毒力基因(如 sea、tsst 和 PVL)。金黄色葡萄球菌 MTR_BAU_H1 的基因组属于 ST1930,拥有 3 个质粒复制子(如 rep16、rep7c 和 rep19)、7 个噬菌体和 2 个大小不等的簇状规则间隔短回文重复(CRISPR)阵列。系统进化分析表明,MTR_BAU_H1基因组与其他不同宿主和人群的MRSA克隆之间存在密切的进化关系。MTR_BAU_H1 基因组包含 42 个抗菌药耐药基因 (ARG)、128 个毒力基因和 273 个 SEED 子系统,编码氨基酸、碳水化合物、蛋白质、辅助因子、维生素、矿物质和脂质的代谢。这是首次基于 WGS 对从孟加拉国人体手拭子中分离出的强生物膜产生和 MDR 金黄色葡萄球菌菌株进行的研究,揭示了可能与人和动物的葡萄球菌致病机制有关的抗性基因组(ARGs 和相关机制)和毒力潜能的新信息。
{"title":"Genomic Insights of a Methicillin-Resistant Biofilm-Producing <i>Staphylococcus aureus</i> Strain Isolated From Food Handlers.","authors":"Fatimah Muhammad Ballah, M Nazmul Hoque, Md Saiful Islam, Golam Mahbub Faisal, Al-Muksit Mohammad Taufiquer Rahman, Mst Minara Khatun, Marzia Rahman, Jayedul Hassan, Md Tanvir Rahman","doi":"10.1155/2024/5516117","DOIUrl":"10.1155/2024/5516117","url":null,"abstract":"<p><p>Methicillin-resistant <i>Staphylococcus aureus</i> (MRSA) is an important zoonotic pathogen associated with a wide range of infections in humans and animals. Thus, the emergence of MRSA clones poses an important threat to human and animal health. This study is aimed at elucidating the genomics insights of a strong biofilm-producing and multidrug-resistant (MDR) <i>S. aureus</i> MTR_BAU_H1 strain through whole-genome sequencing (WGS). The <i>S. aureus</i> MTR_BAU_H1 strain was isolated from food handlers' hand swabs in Bangladesh and phenotypically assessed for antimicrobial susceptibility and biofilm production assays. The isolate was further undergone to high throughput WGS and analysed using different bioinformatics tools to elucidate the genetic diversity, molecular epidemiology, sequence type (ST), antimicrobial resistance, and virulence gene distribution. Phenotypic analyses revealed that the <i>S. aureus</i> MTR_BAU_H1 strain is a strong biofilm-former and carries both antimicrobial resistance (e.g., methicillin resistance; <i>mec</i>A, beta-lactam resistance; <i>bla</i>Z and tetracycline resistance; <i>tet</i>C) and virulence (e.g., <i>sea</i>, <i>tsst</i>, and <i>PVL</i>) genes. The genome of the <i>S. aureus</i> MTR_BAU_H1 belonged to ST1930 that possessed three plasmid replicons (e.g., rep16, rep7c, and rep19), seven prophages, and two clustered regularly interspaced short palindromic repeat (CRISPR) arrays of varying sizes. Phylogenetic analysis showed a close evolutionary relationship between the MTR_BAU_H1 genome and other MRSA clones of diverse hosts and demographics. The MTR_BAU_H1 genome harbours 42 antimicrobial resistance genes (ARGs), 128 virulence genes, and 273 SEED subsystems coding for the metabolism of amino acids, carbohydrates, proteins, cofactors, vitamins, minerals, and lipids. This is the first-ever WGS-based study of a strong biofilm-producing and MDR <i>S. aureus</i> strain isolated from human hand swabs in Bangladesh that unveils new information on the resistomes (ARGs and correlated mechanisms) and virulence potentials that might be linked to staphylococcal pathogenesis in both humans and animals.</p>","PeriodicalId":9007,"journal":{"name":"BioMed Research International","volume":null,"pages":null},"PeriodicalIF":2.6,"publicationDate":"2024-07-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11283335/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141787246","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Mesenchymal Stem Cell-Conditioned Media Modulate HUVEC Response to H2O2: Impact on Gene Expression and Potential for Atherosclerosis Intervention. 间充质干细胞条件培养基调节 HUVEC 对 H2O2 的反应:对基因表达的影响和动脉粥样硬化干预的潜力。
IF 2.6 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-07-17 eCollection Date: 2024-01-01 DOI: 10.1155/2024/7726493
Abdulmajeed Alqasoumi, Mansour Alsharidah, Amer Mahmood, Mona Elsafadi, Osamah Al Rugaie, Khalid M Mohany, Khalid A Al-Regaiey, Khaleel I Alyahya, Alaa A Alanteet, Norah K Algarzae, Hanan K AlGhibiwi, Adel AlHomaidi, Mohammad Abumaree

Background: We studied the potential of human bone marrow-derived mesenchymal stem cell conditioned media (hBMSC CM) in protecting endothelial cell properties (viability, proliferation, and migrations) from the deleterious effects produced by the inflammatory environment of H2O2. Additionally, we investigated their impact on the endothelial cells' gene expression of some inflammatory-related genes, namely, TGF-β1, FOS, ATF3, RAF-1, and SMAD3. Methods: Human umbilical vein endothelial cells (HUVECs) were cultured individually under three conditions: alone, with varying concentrations of H2O2, or with varying concentrations of H2O2 and hBMSC CM. HUVEC adhesion, proliferation, and migration were evaluated using the xCELLigence system. The HUVECs' gene expressions were evaluated by real-time polymerase chain reaction (RT-PCR). Results: Generally, we observed enhanced HUVEC viability, proliferation, and migration when cultured in media supplemented with H2O2 and hBMSC CM. Furthermore, the CM modulated the expressions of the studied inflammatory-related genes in HUVECs, promoting a more robust cellular response. Conclusion: This study has illuminated the protective role of hBMSC CM in mitigating the damaging effects of H2O2 on endothelial cell function. Our data demonstrate that hBMSC CM enhances the viability, proliferation, and migration of HUVECs even under oxidative stress conditions. Additionally, the conditioned medium was found to modulate the gene expression of pivotal markers related to inflammation, suggesting a favorable influence on cellular response mechanisms.

背景:我们研究了人骨髓间充质干细胞条件培养基(hBMSC CM)在保护内皮细胞特性(活力、增殖和迁移)免受 H2O2 炎症环境产生的有害影响方面的潜力。此外,我们还研究了它们对内皮细胞某些炎症相关基因(即 TGF-β1、FOS、ATF3、RAF-1 和 SMAD3)表达的影响。方法:在三种条件下单独培养人脐静脉内皮细胞(HUVECs):单独培养、与不同浓度的 H2O2 一起培养或与不同浓度的 H2O2 和 hBMSC CM 一起培养。使用 xCELLigence 系统对 HUVEC 的粘附、增殖和迁移进行了评估。实时聚合酶链反应(RT-PCR)对 HUVEC 的基因表达进行了评估。结果:总体而言,我们观察到在添加了 H2O2 和 hBMSC CM 的培养基中培养的 HUVEC 的活力、增殖和迁移均有所增强。此外,CM 还能调节 HUVEC 中所研究的炎症相关基因的表达,促进更强大的细胞反应。结论本研究揭示了 hBMSC CM 在减轻 H2O2 对内皮细胞功能的破坏作用方面的保护作用。我们的数据表明,即使在氧化应激条件下,hBMSC CM 也能增强 HUVEC 的活力、增殖和迁移。此外,我们还发现条件培养基能调节与炎症有关的关键标志物的基因表达,这表明它对细胞反应机制产生了有利影响。
{"title":"Mesenchymal Stem Cell-Conditioned Media Modulate HUVEC Response to H<sub>2</sub>O<sub>2</sub>: Impact on Gene Expression and Potential for Atherosclerosis Intervention.","authors":"Abdulmajeed Alqasoumi, Mansour Alsharidah, Amer Mahmood, Mona Elsafadi, Osamah Al Rugaie, Khalid M Mohany, Khalid A Al-Regaiey, Khaleel I Alyahya, Alaa A Alanteet, Norah K Algarzae, Hanan K AlGhibiwi, Adel AlHomaidi, Mohammad Abumaree","doi":"10.1155/2024/7726493","DOIUrl":"https://doi.org/10.1155/2024/7726493","url":null,"abstract":"<p><p><b>Background:</b> We studied the potential of human bone marrow-derived mesenchymal stem cell conditioned media (hBMSC CM) in protecting endothelial cell properties (viability, proliferation, and migrations) from the deleterious effects produced by the inflammatory environment of H<sub>2</sub>O<sub>2</sub>. Additionally, we investigated their impact on the endothelial cells' gene expression of some inflammatory-related genes, namely, TGF-<i>β</i>1, FOS, ATF3, RAF-1, and SMAD3. <b>Methods:</b> Human umbilical vein endothelial cells (HUVECs) were cultured individually under three conditions: alone, with varying concentrations of H<sub>2</sub>O<sub>2</sub>, or with varying concentrations of H<sub>2</sub>O<sub>2</sub> and hBMSC CM. HUVEC adhesion, proliferation, and migration were evaluated using the xCELLigence system. The HUVECs' gene expressions were evaluated by real-time polymerase chain reaction (RT-PCR). <b>Results:</b> Generally, we observed enhanced HUVEC viability, proliferation, and migration when cultured in media supplemented with H<sub>2</sub>O<sub>2</sub> and hBMSC CM. Furthermore, the CM modulated the expressions of the studied inflammatory-related genes in HUVECs, promoting a more robust cellular response. <b>Conclusion:</b> This study has illuminated the protective role of hBMSC CM in mitigating the damaging effects of H<sub>2</sub>O<sub>2</sub> on endothelial cell function. Our data demonstrate that hBMSC CM enhances the viability, proliferation, and migration of HUVECs even under oxidative stress conditions. Additionally, the conditioned medium was found to modulate the gene expression of pivotal markers related to inflammation, suggesting a favorable influence on cellular response mechanisms.</p>","PeriodicalId":9007,"journal":{"name":"BioMed Research International","volume":null,"pages":null},"PeriodicalIF":2.6,"publicationDate":"2024-07-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11268959/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141757022","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The High-Dietary Insulin Load Score Is Associated With Elevated Level of Fasting Blood Sugar in Iranian Adult Men: Results From Fasa PERSIAN Cohort Study. 高膳食胰岛素负荷评分与伊朗成年男性空腹血糖水平升高有关:Fasa PERSIAN 队列研究的结果。
IF 2.6 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-07-16 eCollection Date: 2024-01-01 DOI: 10.1155/2024/6991072
Seyede Hamide Rajaie, Sayyed Saeid Khayyatzadeh, Shiva Faghih, Yaser Mansoori, Mohammad Mehdi Naghizadeh, Mojtaba Farjam, Reza Homayounfar, Hassan Mozaffari-Khosravi

Aim: The potential of different foods to induce postprandial hyperinsulinemia may be involved in the development of metabolic syndrome (MetS). We aimed to evaluate the association between dietary insulin indices and MetS in a large population of adults in Iran. Methods: A total of 6356 adults aged 35-70 years were included in the present cross-sectional study. A validated block-format 125-item semiquantitative food frequency questionnaire (FFQ) was used to obtain usual food intakes, and MetS was defined according to the International Diabetes Federation (IDF) and American Heart Association (AHA)/National Heart, Lung, and Blood Institute (NHLBI) criteria. Results: MetS was prevalent in 13.8% of participants. Mean age of the study participants was 46.58 ± 8.82 years, and mean body mass index (BMI) was 25.02 ± 4.60 kg/m2. Mean dietary insulin index (DII) and dietary insulin load (DIL) were 63.15 ± 7.57 and 168.253 ± 52.09, respectively. In the crude model, men in the highest DIL quartile were more likely to have hyperglycemia than those in the lowest quartile (OR: 1.75, 95% CI: 1.12-2.73, p trend = 0.04). This association remained significant and was even stronger after adjusting for potential confounders in model I (OR: 3.64, 95% CI: 1.57-8.47, p trend = 0.005) and further adjustment for BMI in model II (OR: 3.61, 95% CI: 1.55-8.44, p trend = 0.006). Conclusions: In healthy men, adherence to a high-DIL diet may be associated with a greater likelihood of having hyperglycemia. No statistically significant association was observed between insulin indices and the odds of having MetS.

目的:不同食物诱发餐后高胰岛素血症的可能性可能与代谢综合征(MetS)的发病有关。我们的目的是评估伊朗大量成年人膳食胰岛素指数与 MetS 之间的关联。研究方法本横断面研究共纳入了 6356 名 35-70 岁的成年人。采用经过验证的125个项目的块状半定量食物频率问卷(FFQ)来获取通常的食物摄入量,并根据国际糖尿病联合会(IDF)和美国心脏协会(AHA)/美国国家心肺血液研究所(NHLBI)的标准来定义MetS。结果显示13.8%的参与者患有 MetS。研究参与者的平均年龄为 46.58 ± 8.82 岁,平均体重指数(BMI)为 25.02 ± 4.60 kg/m2。膳食胰岛素指数(DII)和膳食胰岛素负荷(DIL)的平均值分别为(63.15 ± 7.57)和(168.253 ± 52.09)。在粗略模型中,DIL最高四分位数的男性比DIL最低四分位数的男性更容易出现高血糖(OR:1.75,95% CI:1.12-2.73,P趋势=0.04)。在模型 I 中调整潜在混杂因素(OR:3.64,95% CI:1.57-8.47,p 趋势 = 0.005)和在模型 II 中进一步调整体重指数(OR:3.61,95% CI:1.55-8.44,p 趋势 = 0.006)后,这种关联性仍然明显,甚至更强。结论在健康男性中,坚持高 DIL 饮食可能与患高血糖的可能性增加有关。胰岛素指数与患 MetS 的几率之间没有明显的统计学关联。
{"title":"The High-Dietary Insulin Load Score Is Associated With Elevated Level of Fasting Blood Sugar in Iranian Adult Men: Results From Fasa PERSIAN Cohort Study.","authors":"Seyede Hamide Rajaie, Sayyed Saeid Khayyatzadeh, Shiva Faghih, Yaser Mansoori, Mohammad Mehdi Naghizadeh, Mojtaba Farjam, Reza Homayounfar, Hassan Mozaffari-Khosravi","doi":"10.1155/2024/6991072","DOIUrl":"10.1155/2024/6991072","url":null,"abstract":"<p><p><b>Aim:</b> The potential of different foods to induce postprandial hyperinsulinemia may be involved in the development of metabolic syndrome (MetS). We aimed to evaluate the association between dietary insulin indices and MetS in a large population of adults in Iran. <b>Methods:</b> A total of 6356 adults aged 35-70 years were included in the present cross-sectional study. A validated block-format 125-item semiquantitative food frequency questionnaire (FFQ) was used to obtain usual food intakes, and MetS was defined according to the International Diabetes Federation (IDF) and American Heart Association (AHA)/National Heart, Lung, and Blood Institute (NHLBI) criteria. <b>Results:</b> MetS was prevalent in 13.8% of participants. Mean age of the study participants was 46.58 ± 8.82 years, and mean body mass index (BMI) was 25.02 ± 4.60 kg/m<sup>2</sup>. Mean dietary insulin index (DII) and dietary insulin load (DIL) were 63.15 ± 7.57 and 168.253 ± 52.09, respectively. In the crude model, men in the highest DIL quartile were more likely to have hyperglycemia than those in the lowest quartile (OR: 1.75, 95% CI: 1.12-2.73, <i>p</i> trend = 0.04). This association remained significant and was even stronger after adjusting for potential confounders in model I (OR: 3.64, 95% CI: 1.57-8.47, <i>p</i> trend = 0.005) and further adjustment for BMI in model II (OR: 3.61, 95% CI: 1.55-8.44, <i>p</i> trend = 0.006). <b>Conclusions:</b> In healthy men, adherence to a high-DIL diet may be associated with a greater likelihood of having hyperglycemia. No statistically significant association was observed between insulin indices and the odds of having MetS.</p>","PeriodicalId":9007,"journal":{"name":"BioMed Research International","volume":null,"pages":null},"PeriodicalIF":2.6,"publicationDate":"2024-07-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11265942/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141750978","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
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