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Immunoinflammatory evidence of rheumatoid arthritis caused by COVID-19. COVID-19引起的类风湿性关节炎的免疫炎症证据。
IF 4.3 2区 生物学 Q1 BIOLOGY Pub Date : 2025-06-10 DOI: 10.1186/s40659-025-00620-7
Zhiqiang Shao, Dan Xia, Liang Zhou, Zonghan Xu, Jiaqian Wang

Purpose: The relationship between coronavirus disease 2019 (COVID-19) and rheumatoid arthritis (RA) remains uncertain. We aimed to assess the association between COVID-19 and RA through immune inflammation.

Methods: First, we conducted a meta-analysis on the risk of COVID-19 infection, hospitalization rate, and mortality rate for patients with RA. Then, Mendelian randomization (MR) was used to evaluate the causal relationship between COVID-19 and RA, and further analyzed the cytokines and immune cells in COVID-19 and RA. Finally, we obtained microarray datasets of COVID-19, RA patients, and normal controls from the GEO database. And performed functional, pathway enrichment, and immune cell infiltration analysis on differentially expressed genes between each group.

Results: The meta-analysis results suggested that the hospitalization rate and mortality rate of RA patients infected with COVID-19 were higher than those of the control population. MR analysis showed a positive correlation between COVID-19 infection and RA. We also found that interleukin 13 was associated with RA and COVID-19 infection. CD27 on IgD + CD24 + B cells and CD3 on CD39 + CD8 + T cells are common immune cell phenotypes in two diseases. In addition, COVID-19 function is enriched in immune responses mediated by leukocytes and neutrophils, while RA is significantly enriched in the proliferation of T and B lymphocytes. The results of immune cell infiltration showed that both diseases had more neutrophils and fewer CD8 T cells.

Conclusion: There are many similarities between COVID-19 and RA in immune inflammatory responses such as cytokines and immune cells. COVID-19 may lead to the development of RA through immune inflammation.

目的:2019冠状病毒病(COVID-19)与类风湿关节炎(RA)的关系尚不确定。我们旨在通过免疫炎症评估COVID-19与RA之间的关系。方法:首先,我们对RA患者的COVID-19感染风险、住院率和死亡率进行meta分析。然后采用孟德尔随机化(Mendelian randomization, MR)方法评估COVID-19与RA的因果关系,并进一步分析COVID-19与RA的细胞因子和免疫细胞。最后,我们从GEO数据库中获得了COVID-19、RA患者和正常人的微阵列数据集。并对各组差异表达基因进行功能、途径富集和免疫细胞浸润分析。结果:meta分析结果显示,感染COVID-19的RA患者住院率和死亡率均高于对照组。MR分析显示COVID-19感染与RA呈正相关。我们还发现白细胞介素13与RA和COVID-19感染有关。IgD + CD24 + B细胞上的CD27和CD39 + CD8 + T细胞上的CD3是两种疾病中常见的免疫细胞表型。此外,COVID-19的功能在白细胞和中性粒细胞介导的免疫应答中富集,而RA在T淋巴细胞和B淋巴细胞的增殖中显著富集。免疫细胞浸润结果显示两种疾病均有较多的中性粒细胞和较少的CD8 T细胞。结论:COVID-19与RA在细胞因子、免疫细胞等免疫炎症反应上有许多相似之处。COVID-19可能通过免疫炎症导致RA的发展。
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引用次数: 0
Alternative strategies based on transgenic Drosophila melanogaster for the functional characterization of insect Ionotropic Receptors. 基于转基因黑胃果蝇昆虫嗜离子受体功能表征的替代策略。
IF 4.6 2区 生物学 Q1 BIOLOGY Pub Date : 2025-06-09 DOI: 10.1186/s40659-025-00619-0
Cristina M Crava, William B Walker, Alberto Maria Cattaneo

Background: Insect Ionotropic Receptors (IRs) are a relatively uncharted territory. Some studies have documented IR activation by recording neuronal activity in situ, others by their heterologous expression in Xenopus oocytes or mis-expressing IRs from Drosophila melanogaster or from the related D. sechellia into the D. melanogaster "ionotropic receptor decoder" neuron, which lacks the endogenous tuning receptor subunit but expresses IR-coreceptors.

Results: In this study, we first made use of Drosophila olfactory sensory neurons (OSNs) different from the "ionotropic receptor decoder", demonstrating that by replacing or introducing IRs alongside the native D. melanogaster ones, functional heteromeric complexes can be formed. IR41a1 from the lepidopteran Cydia pomonella exhibits binding to polyamines and the IR75d from the dipteran Drosophila suzukii binds hexanoic acid. Secondly, expressing D. suzukii's putative acid sensor IR64a into the "ionotropic receptor decoder" of D. melanogaster inhibits the response to the main activators of neighboring neurons from the same sensillum, despite that IR64a does not respond to acids. In situ hybridization on the antennae of D. suzukii unveils wide expression of IR64a in neurons proximal to the sacculus. Structural modeling analysis does not explain its absence of binding to acids; conversely, this approach identifies key amino acids features explaining the binding of hexanoic acid by IR75d. Finally, we have also explored alternative methods to heterologously express IRs based on Human Embryonic Kidney cells (HEK293). Despite observing correct expression of IRs in transfected cells through immunohistochemistry experiments, this approach did not achieve successful deorphanization of these receptors.

Conclusion: Our findings highlight the potential use of Drosophila OSNs as a valuable tool for functional characterization of IRs from different insect species: for the first time, we have provided evidence of IR-functionalities within alternative OSNs from the Drosophila's "ionotropic receptor decoder" neuron to functionally characterize and deorphanize IRs from lineages that are evolutionarily distant from the D. melanogaster subgroup, contributing to the understanding of chemosensory modalities in D. suzukii and C. pomonella, two globally significant agricultural pests. Additionally, the unsuccessful deorphanization in HEK cells highlights the complex requirements for IR functionality, supporting the use of Drosophila OSNs as a more suitable expression system.

背景:昆虫嗜离子受体(IRs)是一个相对未知的领域。一些研究通过原位记录神经元活性来证明IR激活,另一些研究通过在非洲蟾卵细胞中异源表达或将来自黑腹果蝇或相关黑腹果蝇的IR错误表达到黑腹果蝇的“嗜离子受体解码器”神经元中来证明IR激活,该神经元缺乏内源性调节受体亚基,但表达IR辅助受体。结果:在本研究中,我们首次利用不同于“嗜离子受体解码器”的果蝇嗅觉感觉神经元(OSNs),证明通过替换或引入ir与天然果蝇嗅觉感觉神经元一起,可以形成功能性的异质复合物。鳞翅目Cydia pomonella的IR41a1与多胺结合,而来自双翅目果蝇suzukii的IR75d与己酸结合。其次,将铃木氏线虫假定的酸传感器IR64a表达到黑腹d.m anogaster的“嗜离子受体解码器”中,尽管IR64a对酸没有反应,但抑制了对来自同一感觉器的邻近神经元的主要激活剂的反应。对铃木氏夜蛾触角的原位杂交揭示了IR64a在小囊近端神经元中的广泛表达。结构模型分析不能解释其不与酸结合;相反,这种方法确定了解释IR75d与己酸结合的关键氨基酸特征。最后,我们还探索了基于人胚胎肾细胞(HEK293)异源表达IRs的替代方法。尽管通过免疫组织化学实验观察到转染细胞中IRs的正确表达,但这种方法并没有成功地实现这些受体的去孤儿化。结论:我们的研究结果突出了果蝇的生理活性因子作为一种有价值的工具,可以用于不同昆虫物种的生理活性因子的功能表征。我们首次在果蝇的“嗜离子受体解码器”神经元中提供了ir -功能的证据,以从功能上表征和去孤儿化来自进化上远离黑腹果蝇亚群的谱系的ir,有助于理解两种全球重要的农业害虫——苏氏弓形虫和pomonella的化学感觉模式。此外,HEK细胞中不成功的去孤儿化突出了对IR功能的复杂要求,支持使用果蝇OSNs作为更合适的表达系统。
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引用次数: 0
Detection of KPC-producing Enterobacterales species in wastewater samples from the Gran Concepción Metropolitan area, Chile. 智利Gran Concepción都市地区废水样品中产kpc肠杆菌的检测。
IF 4.3 2区 生物学 Q1 BIOLOGY Pub Date : 2025-06-07 DOI: 10.1186/s40659-025-00612-7
Franco Ilabaca-Carrasco, Carlos Peña-Raddatz, Claudia Torres-Bustos, Mauricio Hernández-Cea, Guillermo Nourdin-Galindo, Pablo Saldivia-Flandez, Cristian Vargas, Elard Koch, Helia Bello-Toledo, Gerardo González-Rocha, Andrés Opazo-Capurro

Background: Carbapenemase-mediated resistance to carbapenems is a significant public health concern due to its potential for widespread dissemination. The KPC family of carbapenemases, encoded by the blaKPC gene and often associated with Tn4401-like transposons, is particularly important for its ability to be transferred through diverse plasmid types. In Chile, KPC-producing Gram-negative bacteria have been detected in clinical settings; however, their occurrence in wastewater (WW) remains unknown. This study addresses this gap by characterizing carbapenem-resistant Enterobacterales isolates from a wastewater treatment plant (WWTP) in the Gran Concepción Metropolitan Area, Chile.

Results: This study identifies three carbapenem-resistant Enterobacterales isolates, namely Klebsiella pasteurii M2/A/C/34, Klebsiella pneumoniae subsp. pneumoniae M3/A/M/3, and Citrobacter freundii sensu stricto. M4/A/C/32, all exhibiting multidrug-resistant profiles and carrying the blaKPC-2 gene encoding KPC-like carbapenemases. These isolates also possessed genes for extended-spectrum β-lactamases (ESBLs) and aminoglycoside-modifying enzymes (AMEs). Sequence typing revealed that M2/A/C/34, M3/A/M/3, and M4/A/C/32 belonged to novel sequence types, specifically ST470, ST273, and ST214, respectively. All isolates carried plasmids belonging to groups commonly associated with ARGs, including IncF, IncP, and IncA. Both Klebsiella isolates (M2/A/C/34 and M3/A/M/3) carried the class 1 integron (intl1) gene. Phylogenomic analysis reveals that M2/A/C/34 is related to strains from China and Pakistan, while M3/A/M/3 shares similarities with a strain from Germany, indicating their potential dissemination.

Conclusions: This study represents the first detection of carbapenem-resistant Enterobacterales carrying blaKPC-2 in Chilean WW, including the novel identification of K. pasteurii. These findings emphasize the critical role of genomic surveillance in WW under the One Health framework, enabling the monitoring of carbapenemase-producing bacteria and associated ARGs. Sustained surveillance efforts are essential to comprehend the dynamics of antibiotic resistance in environmental reservoirs and to develop strategies for its containment and mitigation.

背景:碳青霉烯酶介导的碳青霉烯类耐药是一个重要的公共卫生问题,因为它可能广泛传播。碳青霉烯酶KPC家族由blaKPC基因编码,通常与tn4401样转座子相关,其通过不同质粒类型转移的能力尤为重要。在智利,在临床环境中发现了产生kpc的革兰氏阴性细菌;然而,它们在废水中的分布情况尚不清楚。本研究通过表征从智利Gran Concepción都市地区的污水处理厂(WWTP)分离的耐碳青霉烯类肠杆菌来解决这一空白。结果:本研究鉴定出3株耐碳青霉烯类肠杆菌,分别为巴氏克雷伯菌M2/A/C/34、肺炎克雷伯菌亚群;肺炎菌M3/A/M/3和严格的弗氏柠檬酸杆菌。M4/A/C/32,均表现出多重耐药特征,并携带编码kpc样碳青霉烯酶的blaKPC-2基因。这些分离物还具有广谱β-内酰胺酶(ESBLs)和氨基糖苷修饰酶(AMEs)的基因。序列分型结果表明,M2/A/C/34、M3/A/M/3和M4/A/C/32分别为ST470、ST273和ST214,属于新型序列类型。所有分离株携带的质粒都属于通常与ARGs相关的类群,包括IncF、IncP和IncA。两株克雷伯菌(M2/A/C/34和M3/A/M/3)均携带1类整合子(int1)基因。系统发育分析表明,M2/A/C/34与来自中国和巴基斯坦的菌株有亲缘关系,M3/A/M/3与来自德国的菌株有相似性,提示它们具有传播潜力。结论:本研究首次在智利WW检测到携带blaKPC-2的碳青霉烯耐药肠杆菌,包括新鉴定的巴氏克雷伯菌。这些发现强调了在同一个健康框架下,基因组监测在WW中的关键作用,能够监测产生碳青霉烯酶的细菌和相关的ARGs。持续的监测工作对于了解环境储存库中抗生素耐药性的动态以及制定遏制和减轻其耐药性的战略至关重要。
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引用次数: 0
Knockout of bcas3 gene causes neurodevelopment defects in zebrafish. 敲除bcas3基因导致斑马鱼神经发育缺陷。
IF 4.3 2区 生物学 Q1 BIOLOGY Pub Date : 2025-06-06 DOI: 10.1186/s40659-025-00615-4
Huihui Liu, Nianyi Sun, Zhenxing Liu, Jinze Li, Xianqin Zhang
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引用次数: 0
Harnessing genetic diversity in wheat to enhance grain nutrition and yield for biofortification breeding. 利用小麦遗传多样性提高籽粒营养和产量,进行生物强化育种。
IF 4.3 2区 生物学 Q1 BIOLOGY Pub Date : 2025-06-04 DOI: 10.1186/s40659-025-00606-5
Sadia Hakeem, Zulfiqar Ali, Muhammad Abu Bakar Saddique, Muhammad Habib-Ur-Rahman, Martin Wiehle
<p><strong>Background: </strong>Iron (Fe) and zinc (Zn) deficiencies affect more than two billion people globally. Moreover, phytic acid (PA), an essential phosphorus storage molecule, acts at the same time as an inhibitor of Fe and Zn, forming insoluble complexes; thus, there is a need for balanced compositions of these three substances. Biofortification breeding in staple food crops to combat malnutrition is a straightforward approach. However, evaluating the genetic diversity of the gene pool and the trade-offs between grain nutrients and morphophysiological and yield traits is important. Grain colour is influenced by nutrient composition, including that of minerals such as iron. Therefore, diverse germplasms of 813 genotypes, including Triticum aestivum, Triticum durum, and Triticosecale, were screened for grain colour. A core collection of 26 genotypes was evaluated for the micronutrient concentration over two growing seasons. Further, five contrasting genotypes were chosen to estimate the bioavailability of Fe and Zn.</p><p><strong>Results: </strong>High diversity of grain Fe (31-54 mg kg<sup>-1</sup>) and Zn (15-38 mg kg<sup>-1</sup>) was found among the genotypes. High heritability estimates (> 80%) and genetic advance as a percentage of the mean (GAM; > 20) for quality traits indicated strong genetic control supported by a strong positive correlation between grain colour and micronutrients. For morphophysiological and yield traits, moderate heritability and GAM indicated that genotypic and environmental factors contributed to the inheritance of these traits. Overall, the Fe and Zn concentrations and their bio-availabilities were highest for bread wheat (34-52 mg kg<sup>-1</sup> Fe, 25-37 mg kg<sup>-1</sup> Zn, 5 PA:Fe and 7 PA:Zn molar ratios), followed by Triticosecale (44-46 mg kg<sup>-1</sup>, 27-30 mg kg<sup>-1</sup> Zn, 6 PA:Fe and 9 PA:Zn molar ratios) and durum wheat (36-48 mg kg<sup>-1</sup> Fe, 24-31 mg kg<sup>-1</sup> Zn, 8 PA:Fe and 13 PA:Zn molar ratios).</p><p><strong>Conclusions: </strong>The desirable genotypes (E-1 coded as TA87, for example) with characteristics of amber/yellow grain colour, high grain yield (5020 kg ha<sup>-1</sup>), Fe (51 mg kg<sup>-1</sup>), Zn (37 mg kg<sup>-1</sup>) and low PA:Fe and Zn ratios (5.3 and 7.4, respectively) should be selected for future breeding programs. The study paves the way to simplify the biofortification breeding efforts by identifying (i) grain colour as a potential morphological marker for Fe, (ii) enhanced bioavailability in bread wheat compared to durum and triticale, (iii) mineral concentration and yield can be improved simultaneously to combat malnutrition without yield penalty. However, the association of grain nutrients and colour should be evaluated in diverse environments to assess stability and heritability of the marker trait as well as nutrients. This information will aid in the selection of suitable breeding approaches for biofortification and yield enhancement fo
背景:铁(Fe)和锌(Zn)缺乏症影响着全球超过20亿人。此外,植酸(PA)是一种必需的磷储存分子,同时作为铁和锌的抑制剂,形成不溶性配合物;因此,有必要平衡这三种物质的组成。在主要粮食作物中进行生物强化育种以对抗营养不良是一种直截了当地的方法。然而,评估基因库的遗传多样性以及籽粒养分与形态生理和产量性状之间的权衡是重要的。谷物颜色受营养成分的影响,包括铁等矿物质的成分。为此,对小麦(Triticum aestivum)、硬粒小麦(Triticum durum)和小麦(triticcoscalale)等813个不同基因型的种质进行了籽色筛选。在两个生长季节中,对26个基因型的核心收集进行了微量营养素浓度评估。此外,选择5个不同的基因型来评估铁和锌的生物利用度。结果:籽粒铁(31 ~ 54 mg kg-1)和锌(15 ~ 38 mg kg-1)在不同基因型间差异较大。品质性状的高遗传率估计(bbb80 %)和遗传进步占平均值的百分比(GAM; bbb20 %)表明,籽粒颜色和微量营养素之间存在强烈的正相关关系,这支持了强烈的遗传控制。在形态生理和产量性状方面,遗传力中等,GAM水平较高,表明基因型和环境因素对这些性状的遗传有一定影响。总体而言,面包小麦(34-52 mg kg-1 Fe、25-37 mg kg-1 Zn、5 PA:Fe和7 PA:Zn摩尔比)的铁和锌浓度及其生物利用度最高,其次是黑麦(44-46 mg kg-1、27-30 mg kg-1 Zn、6 PA:Fe和9 PA:Zn摩尔比)和硬粒小麦(36-48 mg kg-1 Fe、24-31 mg kg-1 Zn、8 PA:Fe和13 PA:Zn摩尔比)。结论:在未来的育种计划中,应选择具有琥珀色/黄色、高产量(5020 kg ha-1)、高铁(51 mg kg-1)、高锌(37 mg kg-1)、低PA:Fe和Zn比值(分别为5.3和7.4)的理想基因型(例如编码为TA87的E-1)。该研究通过确定(i)谷物颜色作为铁的潜在形态标记,(ii)与硬粒小麦和小黑麦相比,面包小麦的生物利用度更高,(iii)矿物质浓度和产量可以同时提高,在不影响产量的情况下对抗营养不良,从而为简化生物强化育种工作铺平了道路。然而,应该在不同的环境中评估谷物营养物质和颜色的关系,以评估标记性状和营养物质的稳定性和遗传力。这些信息将有助于选择合适的生物强化育种方法和提高产量,以改善粮食安全。
{"title":"Harnessing genetic diversity in wheat to enhance grain nutrition and yield for biofortification breeding.","authors":"Sadia Hakeem, Zulfiqar Ali, Muhammad Abu Bakar Saddique, Muhammad Habib-Ur-Rahman, Martin Wiehle","doi":"10.1186/s40659-025-00606-5","DOIUrl":"10.1186/s40659-025-00606-5","url":null,"abstract":"&lt;p&gt;&lt;strong&gt;Background: &lt;/strong&gt;Iron (Fe) and zinc (Zn) deficiencies affect more than two billion people globally. Moreover, phytic acid (PA), an essential phosphorus storage molecule, acts at the same time as an inhibitor of Fe and Zn, forming insoluble complexes; thus, there is a need for balanced compositions of these three substances. Biofortification breeding in staple food crops to combat malnutrition is a straightforward approach. However, evaluating the genetic diversity of the gene pool and the trade-offs between grain nutrients and morphophysiological and yield traits is important. Grain colour is influenced by nutrient composition, including that of minerals such as iron. Therefore, diverse germplasms of 813 genotypes, including Triticum aestivum, Triticum durum, and Triticosecale, were screened for grain colour. A core collection of 26 genotypes was evaluated for the micronutrient concentration over two growing seasons. Further, five contrasting genotypes were chosen to estimate the bioavailability of Fe and Zn.&lt;/p&gt;&lt;p&gt;&lt;strong&gt;Results: &lt;/strong&gt;High diversity of grain Fe (31-54 mg kg&lt;sup&gt;-1&lt;/sup&gt;) and Zn (15-38 mg kg&lt;sup&gt;-1&lt;/sup&gt;) was found among the genotypes. High heritability estimates (&gt; 80%) and genetic advance as a percentage of the mean (GAM; &gt; 20) for quality traits indicated strong genetic control supported by a strong positive correlation between grain colour and micronutrients. For morphophysiological and yield traits, moderate heritability and GAM indicated that genotypic and environmental factors contributed to the inheritance of these traits. Overall, the Fe and Zn concentrations and their bio-availabilities were highest for bread wheat (34-52 mg kg&lt;sup&gt;-1&lt;/sup&gt; Fe, 25-37 mg kg&lt;sup&gt;-1&lt;/sup&gt; Zn, 5 PA:Fe and 7 PA:Zn molar ratios), followed by Triticosecale (44-46 mg kg&lt;sup&gt;-1&lt;/sup&gt;, 27-30 mg kg&lt;sup&gt;-1&lt;/sup&gt; Zn, 6 PA:Fe and 9 PA:Zn molar ratios) and durum wheat (36-48 mg kg&lt;sup&gt;-1&lt;/sup&gt; Fe, 24-31 mg kg&lt;sup&gt;-1&lt;/sup&gt; Zn, 8 PA:Fe and 13 PA:Zn molar ratios).&lt;/p&gt;&lt;p&gt;&lt;strong&gt;Conclusions: &lt;/strong&gt;The desirable genotypes (E-1 coded as TA87, for example) with characteristics of amber/yellow grain colour, high grain yield (5020 kg ha&lt;sup&gt;-1&lt;/sup&gt;), Fe (51 mg kg&lt;sup&gt;-1&lt;/sup&gt;), Zn (37 mg kg&lt;sup&gt;-1&lt;/sup&gt;) and low PA:Fe and Zn ratios (5.3 and 7.4, respectively) should be selected for future breeding programs. The study paves the way to simplify the biofortification breeding efforts by identifying (i) grain colour as a potential morphological marker for Fe, (ii) enhanced bioavailability in bread wheat compared to durum and triticale, (iii) mineral concentration and yield can be improved simultaneously to combat malnutrition without yield penalty. However, the association of grain nutrients and colour should be evaluated in diverse environments to assess stability and heritability of the marker trait as well as nutrients. This information will aid in the selection of suitable breeding approaches for biofortification and yield enhancement fo","PeriodicalId":9084,"journal":{"name":"Biological Research","volume":"58 1","pages":"33"},"PeriodicalIF":4.3,"publicationDate":"2025-06-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12135563/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144214902","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Graphene nanoplatelets enhance neuronal differentiation of human bone marrow mesenchymal stem cells. 石墨烯纳米血小板增强人骨髓间充质干细胞的神经元分化。
IF 4.3 2区 生物学 Q1 BIOLOGY Pub Date : 2025-05-30 DOI: 10.1186/s40659-025-00616-3
Gulsah Sevimli, Eda Kus, Gulin Baran, Mahya Marashian, Nasrollah Tabatabaei, Nur Mustafaoglu

Stem cell technology plays a key role in advancing the understanding of neurological treatments and developing disease models that mimic human conditions. Differentiation of human bone marrow mesenchymal stem cells (hBMSCs) into neurons shows promise for treating neurodegenerative diseases. However, improving the functionality of these nerve cells remains a challenge. Graphene nanoplatelets (GNPs), with their excellent conductivity and biocompatibility, can enhance neuronal differentiation. This study examines the effect of GNPs on hBMSC differentiation. Cells cultured with varying GNP concentrations were assessed at 4 and 7 days using RT-qPCR and immunocytochemistry for neuronal markers MAP2, Nestin, and Tuj1. Results show that GNPs enhance marker expression and promote differentiation. Lower GNP concentrations maintained viability, while higher concentrations were detrimental. Morphological changes and increased fluorescence were observed with a 0.4 µg/ml GNP coating. Calcium imaging with Fluo4-AM indicated increased neuronal activity, underscoring GNPs' role in neuronal maturation. These findings suggest GNPs can drive stem cell differentiation toward neurons, offering new therapeutic potential for neurodegenerative diseases.

干细胞技术在促进对神经治疗的理解和开发模仿人类状况的疾病模型方面发挥着关键作用。人骨髓间充质干细胞(hBMSCs)分化成神经元显示出治疗神经退行性疾病的希望。然而,改善这些神经细胞的功能仍然是一个挑战。石墨烯纳米血小板(GNPs)具有良好的导电性和生物相容性,可以促进神经元的分化。本研究探讨GNPs对hBMSC分化的影响。采用RT-qPCR和免疫细胞化学方法,在4天和7天对不同GNP浓度培养的细胞进行神经元标记物MAP2、Nestin和Tuj1的检测。结果表明,GNPs增强了标志物的表达,促进了分化。较低的国民生产总值浓度维持生存能力,而较高的浓度则有害。0.4µg/ml GNP包被可观察到形态学改变和荧光增强。Fluo4-AM钙显像显示神经元活性增加,强调GNPs在神经元成熟中的作用。这些发现表明GNPs可以驱动干细胞向神经元分化,为神经退行性疾病提供新的治疗潜力。
{"title":"Graphene nanoplatelets enhance neuronal differentiation of human bone marrow mesenchymal stem cells.","authors":"Gulsah Sevimli, Eda Kus, Gulin Baran, Mahya Marashian, Nasrollah Tabatabaei, Nur Mustafaoglu","doi":"10.1186/s40659-025-00616-3","DOIUrl":"10.1186/s40659-025-00616-3","url":null,"abstract":"<p><p>Stem cell technology plays a key role in advancing the understanding of neurological treatments and developing disease models that mimic human conditions. Differentiation of human bone marrow mesenchymal stem cells (hBMSCs) into neurons shows promise for treating neurodegenerative diseases. However, improving the functionality of these nerve cells remains a challenge. Graphene nanoplatelets (GNPs), with their excellent conductivity and biocompatibility, can enhance neuronal differentiation. This study examines the effect of GNPs on hBMSC differentiation. Cells cultured with varying GNP concentrations were assessed at 4 and 7 days using RT-qPCR and immunocytochemistry for neuronal markers MAP2, Nestin, and Tuj1. Results show that GNPs enhance marker expression and promote differentiation. Lower GNP concentrations maintained viability, while higher concentrations were detrimental. Morphological changes and increased fluorescence were observed with a 0.4 µg/ml GNP coating. Calcium imaging with Fluo4-AM indicated increased neuronal activity, underscoring GNPs' role in neuronal maturation. These findings suggest GNPs can drive stem cell differentiation toward neurons, offering new therapeutic potential for neurodegenerative diseases.</p>","PeriodicalId":9084,"journal":{"name":"Biological Research","volume":"58 1","pages":"32"},"PeriodicalIF":4.3,"publicationDate":"2025-05-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12123866/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144186547","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Correction: Small extracellular vesicles enhance the survival of Sca-1+ cardiac stem cells against ROS-induced ischemic-reoxygenation injury in vitro. 更正:细胞外小泡可提高Sca-1+心脏干细胞体外抗ros诱导的缺血-再氧化损伤的存活率。
IF 4.3 2区 生物学 Q1 BIOLOGY Pub Date : 2025-05-29 DOI: 10.1186/s40659-025-00611-8
Radwa A Mehanna, Hagar Elkafrawy, Marwa M Essawy, Samar S Ibrahim, Ashraf K Awaad, Nehal A Khalil, Marwa A Kholief, Abeer Sallam, Heba A Hamed, Mona A Barkat, Mohamed F ElKady, Eman H Thabet
{"title":"Correction: Small extracellular vesicles enhance the survival of Sca-1+ cardiac stem cells against ROS-induced ischemic-reoxygenation injury in vitro.","authors":"Radwa A Mehanna, Hagar Elkafrawy, Marwa M Essawy, Samar S Ibrahim, Ashraf K Awaad, Nehal A Khalil, Marwa A Kholief, Abeer Sallam, Heba A Hamed, Mona A Barkat, Mohamed F ElKady, Eman H Thabet","doi":"10.1186/s40659-025-00611-8","DOIUrl":"10.1186/s40659-025-00611-8","url":null,"abstract":"","PeriodicalId":9084,"journal":{"name":"Biological Research","volume":"58 1","pages":"31"},"PeriodicalIF":4.3,"publicationDate":"2025-05-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12121023/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144181140","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Decoding a novel non-enzymatic protein acetylation mechanism in sperm that is essential for fertilizing potential. 解码精子中对受精潜力至关重要的一种新的非酶蛋白乙酰化机制。
IF 4.3 2区 生物学 Q1 BIOLOGY Pub Date : 2025-05-29 DOI: 10.1186/s40659-025-00613-6
María Iniesta-Cuerda, Jan Nevoral, Dario Krapf, Julián Garde, Ana Josefa Soler-Valls, Marc Yeste

Background: Protein acetylation has emerged as essential for sperm function, attracting considerable attention recently. Acetylation, typically mediated by lysine acetyltransferases, involves attaching an acetyl group from acetyl-coenzyme A to lysine residues in proteins. Under alkaline conditions, however, acetylation can occur with minimal enzymatic involvement, primarily due to an elevated pH. As sperm migrate towards the ampulla, they experience increasing intracellular pH (pHi) while undergoing two crucial processes for fertilization: capacitation and the acrosome reaction (AR). Whereas the involvement of acetylating enzymes in these events has been partially investigated, the potential for non-enzymatic acetylation driven by the pHi alkalinization remains unknown.

Results: This study examined protein acetylation (acLys) levels in sperm incubated under capacitating conditions at pH 7.2 and pH 9.0, the latter condition potentially promoting non-enzymatic acetylation. To more precisely investigate the occurrence of non-enzymatic acetylation events, acetyltransferase activity was selectively attenuated using a specific cocktail of inhibitors. The functional implications of these conditions were assessed by examining key fertilization-related sperm attributes, including motility during capacitation and the ability to initiate the AR. Results demonstrated that alkaline conditions elevated basal acLys levels even with reduced acetyltransferase activity (P < 0.05), indicative of non-enzymatic acetylation. α-tubulin, particularly in the midpiece of the sperm flagellum, was identified as a specific target of this modification, correlating with diminished motility during capacitation. Following the AR, acLys levels in the head and midpiece decreased (P < 0.05) under conditions promoting non-enzymatic acetylation, accompanied by reductions in intracellular and acrosomal pH. In contrast, acLys levels and pH in the sperm head incubated under standard capacitating conditions (pH 7.2) remained stable. Sperm exposed to conditions conducive to non-enzymatic acetylation exhibited an impaired ability to trigger the AR (P < 0.05) compared to those maintained at pH 7.2. Notably, diminished acetylase activity emerged as a key factor impairing the maintenance of intracellular and acrosomal pH levels attained during capacitation, even under a pH of 9.0.

Conclusion: This study provides novel evidence for the occurrence of non-enzymatic acetylation in sperm, linked to the modulation of α-tubulin acetylation levels and motility during capacitation. Additionally, it suggests that acetyltransferase activity may play a crucial role in regulating intracellular and acrosomal pH levels in capacitated sperm, facilitating the AR.

背景:蛋白质乙酰化在精子功能中起着至关重要的作用,近年来引起了广泛关注。乙酰化通常由赖氨酸乙酰转移酶介导,涉及将乙酰辅酶A的乙酰基连接到蛋白质中的赖氨酸残基上。然而,在碱性条件下,乙酰化可以在很少的酶参与下发生,主要是由于pH升高。当精子向壶腹迁移时,它们经历了细胞内pH (pHi)的增加,同时经历了受精的两个关键过程:获能和顶体反应(AR)。尽管乙酰化酶在这些事件中的作用已被部分研究,但由pHi碱化驱动的非酶乙酰化的可能性仍然未知。结果:本研究检测了在pH 7.2和pH 9.0的能化条件下培养的精子中蛋白质乙酰化(acLys)水平,后者可能促进非酶乙酰化。为了更精确地研究非酶乙酰化事件的发生,乙酰转移酶活性被选择性地减弱,使用一种特定的抑制剂鸡尾酒。通过检查与受精相关的关键精子属性,包括获能过程中的运动能力和启动AR的能力,评估了这些条件的功能含义。结果表明,碱性条件提高了基础acLys水平,即使乙酰转移酶活性降低(P)。这项研究为精子中非酶乙酰化的发生提供了新的证据,该乙酰化与α-微管蛋白乙酰化水平的调节和获能过程中的运动性有关。此外,这表明乙酰转移酶活性可能在调节获能精子细胞内和顶体pH水平,促进AR中起关键作用。
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引用次数: 0
Mesenchymal stem cells reduce the genotoxic effect of lead acetate in the testis of male rats and induce testicular cellular proliferation indicated by 16S rRNA sequence, increase the proliferation marker Ki-67 and a reduction in the apoptosis marker caspase-3. 间充质干细胞可降低醋酸铅对雄性大鼠睾丸的遗传毒性作用,通过16S rRNA序列显示可诱导睾丸细胞增殖,增加增殖标志物Ki-67,降低凋亡标志物caspase-3。
IF 4.3 2区 生物学 Q1 BIOLOGY Pub Date : 2025-05-27 DOI: 10.1186/s40659-025-00614-5
Mohamed Allam, Yahia A Amin, Samer S Fouad, Rana A Ali, Mariam A Fawy, Maha Abd-El Baki Ahmed, Rana Toghan, Lobna A Ali

Background: Lead is a ubiquitous environmental and industrial pollutant with worldwide health problems. Lead acetate toxicity induces both genotoxic effects and apoptosis. The present study aimed to investigate the usage of mesenchymal stem cells (MSCs) in the treatment of the genotoxic effect of lead acetate (LA) in the testis and its effect on the expression of the apoptosis marker caspase-3 and the proliferation marker Ki-67 in the injured testicular tissue.

Methods: Twenty-one adult male rats were used in this investigation (7 rats/group). Group I received saline and served as the control group (ctrl group); Group II received lead acetate (100 mg/kg) and was called the LA group; Group III received both lead acetate (100 mg/kg) and MSCs (1 × 106 cells/rat) and was called the LA-MSCs group. Body and testis weight, plus semen analysis, were performed in all groups. Reproductive hormones, serotonin, and cortisol were determined in sera. Additionally, oxidative/antioxidative status and lead acetate-induced genetic variations were investigated. Immunohistochemical staining for the proliferation marker Ki-67 and the apoptosis marker caspase-3 was also performed.

Results: revealed that the weight of the body and testis and semen parameters (sperm count, viability, and motility) of the LA group exhibited significant reduction compared to the Ctrl and the LA-MSCs group. In addition, the LA group showed reproductive hormonal imbalance and an increase in oxidative stress biomarkers compared to the LA-MSCs group that showed a significant improvement in these parameters. Compared to the ctrl group, the LA group showed a highly genetic distance value (0.0031), while the LA-MSCs group showed a low genetic distance value (0.0019). This illustrated that the LA-MSCs group exhibited reduced genetic variation induced by LA compared to the LA group. Histological evaluation indicated the presence of severe diffuse degeneration and necrosis in the spermatocytes in the LA group compared to the control one, while co-treatment by MSCs induced significant reduction in these degenerative changes. Immunohistochemical investigation revealed increased expression of the caspase-3 antibody in the testicular tissue of the LA group, while it is significantly decreased in the LA- MSCs group. In contrast, the KI67 antibody revealed a significant decrease in its expression in the LA group, while it was significantly increased in the LA-MSCs group after treatment by MSCs.

Conclusions: It can be concluded that the MSCs are a potential therapeutic for the treatment of testicular dysfunction induced by LA through the reduction of oxidative stress, genotoxic effect, and apoptosis marker caspase-3, and an increase in the proliferation marker Ki-67 in the testicular tissue associated with restoration of hormonal imbalance.

背景:铅是一种普遍存在的环境污染物和工业污染物,是世界性的健康问题。醋酸铅毒性诱导细胞凋亡和基因毒性作用。本研究旨在探讨间充质干细胞(MSCs)治疗醋酸铅(LA)对睾丸损伤组织中凋亡标志物caspase-3和增殖标志物Ki-67表达的影响。方法:选用成年雄性大鼠21只(7只/组)。第一组给予生理盐水治疗,作为对照组(ctrl组);II组给予醋酸铅(100 mg/kg),称为LA组;III组同时给予醋酸铅(100 mg/kg)和MSCs (1 × 106个细胞/大鼠),称为LA-MSCs组。各组均进行体重、睾丸重及精液分析。测定血清中的生殖激素、血清素和皮质醇。此外,还研究了氧化/抗氧化状态和醋酸铅诱导的遗传变异。同时对增殖标志物Ki-67和凋亡标志物caspase-3进行免疫组化染色。结果:与对照组和LA- mscs组相比,LA组的体重、睾丸和精液参数(精子数量、活力和活动力)均显著降低。此外,与LA- mscs组相比,LA组表现出生殖激素失衡和氧化应激生物标志物的增加,LA- mscs组在这些参数上显示出显着改善。与对照组相比,LA组遗传距离值高(0.0031),LA- mscs组遗传距离值低(0.0019)。这说明LA- mscs组与LA组相比,LA诱导的遗传变异减少。组织学评估显示,与对照组相比,LA组的精母细胞存在严重的弥漫性变性和坏死,而MSCs联合治疗可显著减少这些退行性变化。免疫组化结果显示,LA组睾丸组织中caspase-3抗体的表达增加,而LA- MSCs组则明显降低。相比之下,KI67抗体在LA组中表达显著降低,而在LA-MSCs组中经MSCs处理后表达显著升高。结论:MSCs通过降低氧化应激、基因毒性效应、凋亡标志物caspase-3、增加睾丸组织中与激素失衡恢复相关的增殖标志物Ki-67,是治疗LA所致睾丸功能障碍的潜在药物。
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引用次数: 0
Heterozygous deletion of exon 17 of the Kit gene impairs mouse spermatogenesis by attenuating MAPK-ERK signaling. Kit基因外显子17的杂合缺失通过减弱MAPK-ERK信号通路而损害小鼠精子发生。
IF 4.3 2区 生物学 Q1 BIOLOGY Pub Date : 2025-05-13 DOI: 10.1186/s40659-025-00609-2
Siyuan Lin, Min Yang, Weipeng Zhu, Changqi Yang, Yaosheng Chen, Peiqing Cong, Xiaohong Liu, Zuyong He

Background: A splice mutation that causes skipping of exon 17 in the KIT gene is a major reason for the dominant white phenotype of pigs. Exon 17 of the KIT gene may be related to differences in testis size and sperm quality among different pig breeds. Investigating the effects of exon 17 of the KIT gene on spermatogonia differentiation and testicular development is essential for understanding the genetic causes of reduced fertility and semen quality in pigs. To better understand the effects of the splice mutation of KIT on porcine spermatogenesis, we described an exon 17 deletion mouse model (Kit D17/+) constructed by simulating splice mutations in KIT for functional verification.

Results: Deletion of exon 17 of Kit severely impaired the differentiation of spermatogonia and promoted the apoptosis of germ cells, resulting in testicular dysplasia and decreased sperm quality and male fertility. Further transcriptomic analysis revealed inhibited expression of genes involved in meiosis and spermatogenesis and attenuated MAPK-ERK signaling in the testicular tissues of Kit D17/+ mice. The attenuated MAPK-ERK signaling caused by impaired Kit phosphorylation was confirmed by western blotting.

Conclusions: Our study demonstrated that deletion of exon 17 of Kit severely impaired spermatogenesis and testicular development, leading to decreased semen quality and male fertility. These findings verified the function of exon 17 in the Kit gene and provide a theoretical basis for improving the semen quality of dominant white pigs through correction of the splice mutation of KIT.

背景:导致KIT基因外显子17跳变的剪接突变是猪显性白色表型的主要原因。KIT基因外显子17可能与不同猪种睾丸大小和精子质量的差异有关。研究KIT基因外显子17对精原细胞分化和睾丸发育的影响,对于了解猪生育能力和精液质量下降的遗传原因至关重要。为了更好地了解KIT剪接突变对猪精子发生的影响,我们通过模拟KIT剪接突变构建了外显子17缺失小鼠模型(KIT D17/+)进行功能验证。结果:Kit外显子17缺失严重损害精原细胞分化,促进生殖细胞凋亡,导致睾丸发育不良,精子质量下降,男性生育能力下降。进一步的转录组学分析显示,Kit D17/+小鼠睾丸组织中参与减数分裂和精子发生的基因表达受到抑制,MAPK-ERK信号通路减弱。western blotting证实Kit磷酸化受损导致MAPK-ERK信号减弱。结论:我们的研究表明,Kit外显子17的缺失严重损害了精子发生和睾丸发育,导致精液质量下降和男性生育能力下降。这些发现验证了Kit基因外显子17的功能,为通过修正Kit剪接突变来提高优势白猪精液质量提供了理论依据。
{"title":"Heterozygous deletion of exon 17 of the Kit gene impairs mouse spermatogenesis by attenuating MAPK-ERK signaling.","authors":"Siyuan Lin, Min Yang, Weipeng Zhu, Changqi Yang, Yaosheng Chen, Peiqing Cong, Xiaohong Liu, Zuyong He","doi":"10.1186/s40659-025-00609-2","DOIUrl":"10.1186/s40659-025-00609-2","url":null,"abstract":"<p><strong>Background: </strong>A splice mutation that causes skipping of exon 17 in the KIT gene is a major reason for the dominant white phenotype of pigs. Exon 17 of the KIT gene may be related to differences in testis size and sperm quality among different pig breeds. Investigating the effects of exon 17 of the KIT gene on spermatogonia differentiation and testicular development is essential for understanding the genetic causes of reduced fertility and semen quality in pigs. To better understand the effects of the splice mutation of KIT on porcine spermatogenesis, we described an exon 17 deletion mouse model (Kit <sup>D17/+</sup>) constructed by simulating splice mutations in KIT for functional verification.</p><p><strong>Results: </strong>Deletion of exon 17 of Kit severely impaired the differentiation of spermatogonia and promoted the apoptosis of germ cells, resulting in testicular dysplasia and decreased sperm quality and male fertility. Further transcriptomic analysis revealed inhibited expression of genes involved in meiosis and spermatogenesis and attenuated MAPK-ERK signaling in the testicular tissues of Kit <sup>D17/+</sup> mice. The attenuated MAPK-ERK signaling caused by impaired Kit phosphorylation was confirmed by western blotting.</p><p><strong>Conclusions: </strong>Our study demonstrated that deletion of exon 17 of Kit severely impaired spermatogenesis and testicular development, leading to decreased semen quality and male fertility. These findings verified the function of exon 17 in the Kit gene and provide a theoretical basis for improving the semen quality of dominant white pigs through correction of the splice mutation of KIT.</p>","PeriodicalId":9084,"journal":{"name":"Biological Research","volume":"58 1","pages":"28"},"PeriodicalIF":4.3,"publicationDate":"2025-05-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12070560/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143954040","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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Biological Research
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