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Erratum notice for: "Unlocking the molecular realm: advanced approaches for identifying clinically and environmentally relevant bacteria" [Braz J Med Biol Res 2023: 56, e12894]. [J].中国生物医学工程学报,2011,(2):1 - 4。
IF 1.9 4区 医学 Q2 BIOLOGY Pub Date : 2024-12-02 DOI: 10.1590/1414-431X2024e12894erratum

[This corrects the article doi: 10.1590/1414-431X2023e12894].

[这更正了文章doi: 10.1590/1414-431X2023e12894]。
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引用次数: 0
Machine learning approaches and genetic determinants that influence the development of type 2 diabetes mellitus: a genetic association study in Brazilian patients. 机器学习方法和影响2型糖尿病发展的遗传决定因素:巴西患者的遗传关联研究
IF 1.9 4区 医学 Q2 BIOLOGY Pub Date : 2024-12-02 eCollection Date: 2024-01-01 DOI: 10.1590/1414-431X2024e13957
K F Santos, L P Assunção, R S Santos, A A S Reis

This genetic association study including 120 patients with type 2 diabetes mellitus (T2DM) and 166 non-diabetic individuals aimed to investigate the association of polymorphisms in the genes GSTM1 and GSTT1 (gene deletion), GSTP1 (rs1695), ACE (rs4646994), ACE2 (rs2285666), VEGF-A (rs28357093), and MTHFR (rs1801133) with the development of T2DM in the population of Goiás, Brazil. Additionally, the combined effects of these polymorphisms and the possible differences between sexes in susceptibility to the disease were evaluated. Finally, machine learning models were integrated to select the main risk characteristics for the T2DM diagnosis. Risk associations were found for the GSTT1-null genotype in the non-stratified sample and females, and for mutant C allele of the VEGF-A rs28357093 polymorphism in the non-stratified sample. Furthermore, an association of heterozygous (AG) and mutant (GG) GSTP1 genotypes was observed when combined with GSTT1-null. Machine learning approaches corroborated the results found. Therefore, these results suggested that GSTT1 and GSTP1 polymorphisms may contribute to T2DM susceptibility in a Brazilian sample.

这项遗传关联研究包括120例2型糖尿病(T2DM)患者和166例非糖尿病个体,旨在研究巴西Goiás人群中GSTM1和GSTT1(基因缺失)、GSTP1 (rs1695)、ACE (rs4646994)、ACE2 (rs2285666)、VEGF-A (rs28357093)和MTHFR (rs1801133)基因多态性与T2DM发生的关系。此外,这些多态性的综合影响和对疾病易感性的性别之间可能的差异进行了评估。最后,结合机器学习模型选择T2DM诊断的主要风险特征。在非分层样本和女性中发现了GSTT1-null基因型的风险关联,在非分层样本中发现了VEGF-A rs28357093多态性突变基因C的风险关联。此外,当与GSTT1-null组合时,观察到杂合型(AG)和突变型(GG) GSTP1基因型的关联。机器学习方法证实了发现的结果。因此,这些结果表明,GSTT1和GSTP1多态性可能与巴西样本中的T2DM易感性有关。
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引用次数: 0
Deoxycholic acid aggravates necrotizing enterocolitis through downregulation of mesenchymal-epithelial transition factor expression. 脱氧胆酸通过下调间充质上皮过渡因子表达加重坏死性小肠结肠炎。
IF 1.9 4区 医学 Q2 BIOLOGY Pub Date : 2024-12-02 eCollection Date: 2024-01-01 DOI: 10.1590/1414-431X2024e14046
Hongfu Li, Jiahao Lai, Dongfan Xiao, Dabin Huang, Yinchun Zhang, Xia Gu, Fei Li, Hu Hao

Bile acids are closely associated with necrotizing enterocolitis (NEC), and their accumulation has cytotoxic effects on cells. However, the specific bile acid subtype involved in NEC and its underlying mechanisms remains poorly understood, limiting the therapeutic potential of bile acids as treatment targets. In the present study, deoxycholic acid (DCA) accumulation in the intestinal lumen exacerbated NEC-induced intestinal damage. DCA suppressed the expression of mesenchymal-epithelial transition factor (MET), a proto-oncogene located on chromosome 7q31.2 that encodes c-Met, in the mouse intestine through transcription factors and increased nuclear translocation of p-STAT3. MET is a receptor tyrosine kinase that participates in cell proliferation and migration processes. Increasing concentrations of DCA downregulated MET expression and reduced the proliferation and migration of intestinal epithelial cells in vitro. MET knockdown reduced the proliferation and migration of intestinal epithelial cells but increased STAT3 phosphorylation. These findings indicated that MET mediated STAT3 involvement in intestinal epithelial cell proliferation and migration, demonstrating that the inhibitory effect of DCA on MET disrupted this process. These results elucidated the damaging effects and mechanisms of DCA accumulation in NEC, providing new insights into the use of DCA as a therapeutic target for NEC.

胆汁酸与坏死性小肠结肠炎(NEC)密切相关,其积累对细胞具有细胞毒性作用。然而,涉及NEC的特定胆汁酸亚型及其潜在机制仍然知之甚少,限制了胆汁酸作为治疗靶点的治疗潜力。在本研究中,去氧胆酸(DCA)在肠腔内的积累加重了nec诱导的肠道损伤。DCA通过转录因子和增加p-STAT3的核易位抑制小鼠肠内间充质上皮过渡因子(MET)的表达,MET是位于染色体7q31.2上编码c-Met的原癌基因。MET是一种受体酪氨酸激酶,参与细胞增殖和迁移过程。在体外实验中,增加DCA浓度可下调MET表达,减少肠上皮细胞的增殖和迁移。MET敲低降低了肠上皮细胞的增殖和迁移,但增加了STAT3磷酸化。这些发现表明MET介导STAT3参与肠上皮细胞的增殖和迁移,表明DCA对MET的抑制作用破坏了这一过程。这些结果阐明了DCA在NEC中积累的损伤作用和机制,为使用DCA作为NEC的治疗靶点提供了新的见解。
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引用次数: 0
Effects of imposed and self-selected exercise on perceptual and affective responses, muscle function, quality, and functionality of strength training in older women and men: a randomized trial. 强加和自我选择运动对老年女性和男性力量训练的感知和情感反应、肌肉功能、质量和功能的影响:一项随机试验。
IF 1.9 4区 医学 Q2 BIOLOGY Pub Date : 2024-12-02 eCollection Date: 2024-01-01 DOI: 10.1590/1414-431X2024e13968
E D S A Garcia, S S Ferreira, R Lazzarotto, J K F da Silva, P C B Bento

The objective of the present randomized trial was to verify the effect of twelve weeks of strength training with self-selected and imposed loads on muscle function, functionality, muscle quality, and perceptual and affective responses in elderly men and women. Twenty-four volunteers were divided into two groups of 12 individuals each: self-selected group (SS) (8 women, 4 men; mean age=66.92±6.18 years) and imposed group (IMP) (8 women, 4 men; mean age=65.33±2.42 years). The strength exercise program lasted 12 weeks (3 d/w). All exercises were performed on machines. The SS group was instructed to select a weight that would allow them to complete three sets of 10 repetitions, while the IMP group had the load imposed by the researchers following the exercise prescription model recommended by American College of Sports Medicine (ACSM). Rated perceived exertion (RPE) and affective responses were recorded at the end of each session. Muscle function, functionality, and muscle quality were assessed before and after the intervention. Both groups demonstrated similar improvements in strength and functional capacity. Furthermore, the SS group reported lower RPE and higher affective responses compared to the IMP group at 8-12 weeks. In summary, the findings from this study highlighted the effectiveness of both IMP and SS intensity resistance training programs in enhancing muscle strength and functional capacity among older adults.

本随机试验的目的是验证12周自我选择和强加负荷的力量训练对老年男性和女性肌肉功能、功能、肌肉质量以及感知和情感反应的影响。24名志愿者被分为两组,每组12人:自我选择组(SS)(8名女性,4名男性;平均年龄=66.92±6.18岁)和强加组(IMP)(女性8人,男性4人;平均年龄=65.33±2.42岁)。力量训练计划持续12周(3 d/w)。所有的锻炼都在机器上进行。SS组被要求选择一个可以让他们完成三组10次重复的重量,而IMP组的负荷是由研究人员根据美国运动医学学院(ACSM)推荐的运动处方模型施加的。在每个疗程结束时,记录受试者的感知运动强度(RPE)和情感反应。在干预前后评估肌肉功能、功能性和肌肉质量。两组在力量和功能能力方面表现出相似的改善。此外,在8-12周时,与IMP组相比,SS组报告了更低的RPE和更高的情感反应。总之,这项研究的结果强调了IMP和SS强度阻力训练计划在增强老年人肌肉力量和功能能力方面的有效性。
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引用次数: 0
Bioinformatic features and immunological response of recombinant antigen CTLA4-IgV-EgG1Y162 against Echinococcus granulosus. 重组抗原 CTLA4-IgV-EgG1Y162 对抗肉芽肿棘球蚴的生物信息学特征和免疫反应
IF 1.9 4区 医学 Q2 BIOLOGY Pub Date : 2024-11-25 eCollection Date: 2024-01-01 DOI: 10.1590/1414-431X2024e13139
Shangqi Zhao, Yanmin Li, Huifang Kong, Yanxia Zhou, Wentao Zhou, Jia Zheng, Qiaoqiao Gong, Chunbao Cao, Jianbing Ding, Xiaotao Zhou

Cystic echinococcosis (CE) is a zoonotic disease caused by the infection of Echinococcus granulosus (E. granulosus) larva. Currently, blocking the pathogenic cycle chain through immunoprophylaxis has become the main research direction. EgG1Y162 protein has good antigenicity and immunogenicity and is therefore a good candidate molecule for E. granulosus vaccine. Mature T cells express CTLA-4 on their surface, and its extracellular IgV region binds efficiently to the B7 molecules on antigen-presenting cells to deliver negative signals. We designed and prepared a recombinant vaccine by fusing CTLA-4IgV to the EgG1Y162 protein to exploit its binding properties. Bioinformatic methods were used to analyze the structure and epitopes of the proposed recombinant vaccine. The placement of 16 amino acids (GTDDDDKAMADIGSEF) between the CTLA-4IgV and EgG1Y162 using the skeleton structure of pET30a plasmid did not affect the correct folding of the proteins. When the recombinant proteins were co-cultured with bone marrow-induced dendritic cells (DC), the protein CTLA-4IgV-EgG1Y162 promoted its binding to DC and increased the percentage of DC maturation compared with protein EgG1Y162 in vitro and in vivo. Compared to EgG1Y162, CTLA-4IgV-EgG1Y162 promoted the proliferation of lymphocytes in spleen and the release of interferon (IFN)-γ and interleukin (IL)-4 by those lymphocytes in vitro, while it also promoted the release of protective antibodies in the serum of immunized mice in vivo. These findings indicated that the designed recombinant vaccine, CTLA-4IgV-EgG1Y162, can provide new ideas for the optimization and improvement of vaccines against E. granulosus.

囊性棘球蚴病(CE)是一种由颗粒棘球蚴感染引起的人畜共患疾病。目前,通过免疫预防阻断致病循环链已成为主要研究方向。EgG1Y162 蛋白具有良好的抗原性和免疫原性,因此是肉毒梭菌疫苗的良好候选分子。成熟的T细胞表面表达CTLA-4,其胞外IgV区可与抗原递呈细胞上的B7分子有效结合,传递负信号。我们将 CTLA-4IgV 与 EgG1Y162 蛋白融合,利用其结合特性设计并制备了重组疫苗。我们使用生物信息学方法分析了拟议重组疫苗的结构和表位。利用 pET30a 质粒的骨架结构在 CTLA-4IgV 和 EgG1Y162 之间放置 16 个氨基酸(GTDDDDKAMADIGSEF)不会影响蛋白质的正确折叠。当重组蛋白与骨髓诱导的树突状细胞(DC)共培养时,与蛋白EgG1Y162相比,蛋白CTLA-4IgV-EgG1Y162促进了与DC的结合,并提高了DC在体外和体内的成熟比例。与 EgG1Y162 相比,CTLA-4IgV-EgG1Y162 能促进脾脏中淋巴细胞的增殖以及这些淋巴细胞在体外释放干扰素(IFN)-γ 和白细胞介素(IL)-4,同时还能促进免疫小鼠血清中保护性抗体的释放。这些研究结果表明,所设计的重组疫苗CTLA-4IgV-EgG1Y162可为优化和改进肉毒杆菌疫苗提供新思路。
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引用次数: 0
Optimizing genomic DNA extraction from long-term preserved formalin-fixed and paraffin-embedded lung cancer and lymph node tissues. 优化从长期保存的福尔马林固定和石蜡包埋肺癌及淋巴结组织中提取基因组 DNA。
IF 1.9 4区 医学 Q2 BIOLOGY Pub Date : 2024-11-25 eCollection Date: 2024-01-01 DOI: 10.1590/1414-431X2024e14095
C S Faria, C M Baldavira, F R R Mangone, M E M Agati, L D Kulikowski, M A Nagai, E C T do Nascimento, E S de Mello, V L Capelozzi, L Antonangelo

Personalized therapy in lung cancer (LC) has revolutionized routine histopathology and cytopathology, emphasizing the importance of obtaining adequate material for molecular studies to support oncological decisions. Adaptations of cytologic sample preparations offer benefits for molecular testing, yet their potential remains underutilized. A significant number of LC cases is identified through specimens of aspiration or exfoliative cytology. Improving screening approaches and optimizing tissue utilization for biomarker research are crucial for effective LC management. The utilization of formalin-fixed, paraffin-embedded (FFPE) tumor tissues has become standard practice in clinical and epidemiological genetic research. However, current techniques require not only a standardized sample fixation and storage but also sufficient genetic material to yield reliable results. In this study, we utilized the Qiagen GeneRead® DNA FFPE kit with an adapted protocol for two extraction methods: one involved cutting FFPE blocks and the other involved scraping tissue from slides used for histochemical and cytological analysis. Our findings emphasized the importance of increasing the number of FFPE sections, heat deparaffinization, and adjusting proteinase K digestion time to enhance genomic DNA (gDNA) yields. Notably, scraping tissue from slides yielded superior results compared to the standard FFPE protocol. A median of 2.82 and 4.34 DNA yields for tumor and lymph node, respectively, were obtained. Our results demonstrated the feasibility of this adapted protocol for gDNA extraction in clinical and epidemiological studies. We recommend scraping tissue from slides as a reliable source of gDNA and suggest fine-tuning proteinase K digestion time and heat exposure based on the input tissue volume.

肺癌的个性化治疗彻底改变了常规组织病理学和细胞病理学,强调了为分子研究获取足够材料以支持肿瘤决策的重要性。细胞学样本制备的改良为分子检测带来了好处,但其潜力仍未得到充分利用。大量 LC 病例是通过抽吸或脱落细胞学标本确定的。改进筛查方法和优化组织利用以进行生物标记物研究对有效的 LC 管理至关重要。使用福尔马林固定、石蜡包埋(FFPE)肿瘤组织已成为临床和流行病学基因研究的标准做法。然而,目前的技术不仅需要标准化的样本固定和储存,还需要足够的遗传物质才能获得可靠的结果。在这项研究中,我们使用了Qiagen GeneRead® DNA FFPE试剂盒,并调整了两种提取方法的方案:一种是切割FFPE块,另一种是从用于组织化学和细胞学分析的载玻片上刮取组织。我们的研究结果强调了增加FFPE切片数量、热去石墨化和调整蛋白酶K消化时间对提高基因组DNA(gDNA)产量的重要性。值得注意的是,与标准的 FFPE 方案相比,从切片上刮取组织的效果更好。肿瘤和淋巴结的DNA产量中位数分别为2.82和4.34。我们的研究结果表明,在临床和流行病学研究中采用这种改良方案提取 gDNA 是可行的。我们建议从切片中刮取组织作为 gDNA 的可靠来源,并建议根据输入的组织体积微调蛋白酶 K 消化时间和加热时间。
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引用次数: 0
Changes in cerebral glucose metabolism among mild long COVID patients: an [18F]FDG PET/CT study. 轻度长程COVID患者脑葡萄糖代谢的变化:[18F]FDG PET/CT研究。
IF 1.9 4区 医学 Q2 BIOLOGY Pub Date : 2024-11-25 eCollection Date: 2024-01-01 DOI: 10.1590/1414-431X2024e14228
J S Sakamoto, L E Lopes-Santos, K J C C de Lacerda, A C Trevisan, L Alexandre-Santos, O Y Fukumori, F Bellissimo-Rodrigues, L Wichert-Ana

COVID-19, caused by SARS-CoV-2, presents diverse symptoms, including neurological manifestations. This study investigated COVID-19's neurological sequelae, focusing on the central nervous system's involvement through cerebral glycolytic metabolism assessed via PET/CT. Twenty-two patients with mild long COVID cognitive symptoms and 20 healthy volunteers without cognitive, psychiatric, or neurological impairments and no history of COVID-19 infection underwent cerebral PET/CT scans using [18F]FDG to assess cerebral metabolism. The study meticulously evaluated the uptake of [18F]FDG in various brain regions, employing the CortexID Suite software for quantitative analysis. The analysis focused on identifying areas of hypometabolism and hypermetabolism, indicative of altered glucose metabolism possibly related to COVID-19's neurological impact. No statistically significant differences were found between the mild COVID and healthy groups. Although our sample was too small to generate a statistical difference between groups, future studies should explore some findings, such as hypometabolism in 15 regions and hypermetabolism in 11 regions in the mild COVID group. These changes, especially in areas linked to executive functions, sensory perception, and emotional regulation, suggest nuanced alterations in brain function. Our study did not find significant glycolytic metabolic changes in patients with mild long COVID. However, areas of glycolytic hypometabolism and hypermetabolism found in some patients showed biological plausibility with the cognitive and affective symptoms they presented. Future investigations with a larger sample size should be correlated with neuropsychological and neuropsychiatric examinations to confirm this relationship.

由 SARS-CoV-2 引起的 COVID-19 表现出多种症状,包括神经系统表现。本研究调查了 COVID-19 的神经系统后遗症,重点是通过 PET/CT 评估脑糖酵解代谢对中枢神经系统的影响。22 名有轻度长 COVID 认知症状的患者和 20 名无认知、精神或神经损伤且无 COVID-19 感染史的健康志愿者接受了脑 PET/CT 扫描,使用 [18F]FDG 评估脑代谢。研究采用 CortexID Suite 软件进行定量分析,细致评估了不同脑区对 [18F]FDG 的摄取情况。分析的重点是确定代谢低下和代谢亢进的区域,这表明葡萄糖代谢的改变可能与 COVID-19 对神经系统的影响有关。轻度 COVID 组和健康组之间没有发现明显的统计学差异。虽然我们的样本太少,无法得出组间的统计学差异,但未来的研究应探讨一些发现,如轻度 COVID 组中 15 个区域代谢低下,11 个区域代谢亢进。这些变化,尤其是与执行功能、感官知觉和情绪调节有关的区域的变化,表明大脑功能发生了细微的改变。我们的研究没有发现轻度长程COVID患者体内有明显的糖代谢变化。然而,在一些患者身上发现的糖代谢不足和糖代谢亢进区域与他们表现出的认知和情感症状具有生物学上的合理性。今后的研究应将更多样本与神经心理学和神经精神病学检查联系起来,以证实这种关系。
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引用次数: 0
PMEPA1 promotes gastric cancer cell proliferation by regulating the ubiquitin-mediated degradation of 14-3-3σ and promoting cell cycle progression. PMEPA1通过调节泛素介导的14-3-3σ降解和促进细胞周期进展来促进胃癌细胞增殖。
IF 1.9 4区 医学 Q2 BIOLOGY Pub Date : 2024-11-25 eCollection Date: 2024-01-01 DOI: 10.1590/1414-431X2024e13985
Heyuan Huang, Ruizheng Sun, Yi Xu, Renchao Liu, Zihua Chen

Gastric cancer (GC) remains a global health challenge due to its heterogeneity and diverse regional epidemiology. Treatment for advanced GC often requires chemotherapy, whose effects are closely associated with the cell cycle. This association highlights the critical need to understand cell cycle regulators that can influence the effectiveness of chemotherapy. Bioinformatics analyses were performed on transcriptome data from a hospital cohort and on a publicly available database. Flow cytometry was used for cell cycle analysis. The interaction of PMEPA1 with 14-3-3σ was confirmed by coimmunoprecipitation and immunofluorescence staining. Western blot analysis was performed following inhibition of protein synthesis and degradation to assess 14-3-3σ protein stability, while ubiquitination was evaluated after treatment with the proteasome inhibitor MG132. High PMEPA1 expression was detected in GC tissues and was correlated with poor prognosis. In vitro overexpression of PMEPA1 promoted GC cell proliferation, while knockdown of PMEPA1 inhibited cell proliferation and induced G2/M arrest. In vivo study showed that overexpressing PMEPA1 promoted tumor growth, while knocking down PMEPA1 inhibited tumor growth, as indicated by the level of the proliferation marker Ki67. 14-3-3σ was identified as a downstream target of PMEPA1. PMEPA1 binds to 14-3-3σ and promoted its degradation by facilitating its ubiquitination. Overexpression of PMEPA1 increased its interactions with TTC3 and 14-3-3σ, increased 14-3-3σ ubiquitination, and reduced 14-3-3σ stability, and the opposite effects were observed after PMEPA1 knockdown. PMEPA1 recruited TTC3, allowing the ubiquitination of 14-3-3σ and leading to its degradation, thus promoting cell cycle progression in GC.

由于胃癌(GC)的异质性和不同地区的流行病学,它仍然是一项全球性的健康挑战。晚期胃癌的治疗通常需要化疗,而化疗的效果与细胞周期密切相关。这种关联凸显了了解细胞周期调节因子对化疗效果影响的迫切需要。我们对来自医院队列和公开数据库的转录组数据进行了生物信息学分析。流式细胞仪用于细胞周期分析。通过共沉淀和免疫荧光染色证实了PMEPA1与14-3-3σ的相互作用。在抑制蛋白合成和降解后进行了 Western 印迹分析,以评估 14-3-3σ 蛋白的稳定性,而在蛋白酶体抑制剂 MG132 处理后则评估了泛素化情况。在 GC 组织中检测到了 PMEPA1 的高表达,并与不良预后相关。体外过表达 PMEPA1 促进 GC 细胞增殖,而敲除 PMEPA1 则抑制细胞增殖并诱导 G2/M 停滞。体内研究表明,过表达 PMEPA1 会促进肿瘤生长,而敲除 PMEPA1 则会抑制肿瘤生长,这可以从增殖标志物 Ki67 的水平看出。14-3-3σ被确定为PMEPA1的下游靶标。PMEPA1与14-3-3σ结合,并通过促进其泛素化来促进其降解。过表达PMEPA1增加了它与TTC3和14-3-3σ的相互作用,增加了14-3-3σ的泛素化,降低了14-3-3σ的稳定性,而敲除PMEPA1后则观察到相反的效果。PMEPA1招募了TTC3,使14-3-3σ泛素化并导致其降解,从而促进了GC的细胞周期进展。
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引用次数: 0
Diagnostic and prognostic value of the gasdermins in gastric cancer. 胃癌气敏蛋白的诊断和预后价值。
IF 1.9 4区 医学 Q2 BIOLOGY Pub Date : 2024-11-25 eCollection Date: 2024-01-01 DOI: 10.1590/1414-431X2024e13817
Yeqiong Xu, Jie Chen, Ping Wang, Huanhuan Chen, Yilin Zhao, Xuexian Cao, Chuandan Wan, Yulan Gu

Pyroptosis has attracted attention due to its role in various cancers. Recently, gasdermins (GSDMs) involved in pyroptosis have been reported to be associated with several types of cancers. However, the role of GSDMs expression in the diagnosis and prognosis of gastric cancer (GC) is still not well understood. We analyzed the transcriptional and prognostic information and the role of GSDMs in patients with GC from TIMER, UALCAN, Human Protein Atlas (HPA), GEPIA, and Kaplan-Meier Plotter databases. The cBioPortal platform was used to discover the genetic alterations, significance, and networks of GSDMs. Furthermore, STRING, Cytoscape, and TIMER were used to explore functional enrichment and immunomodulation. GSDMB, GSDMC, GSDMD, and GSDME were more highly expressed in GC than in normal tissues in the TIMER database. Moreover, survival analyses in two databases showed that high expression of GSDME was related to shorter overall survival (OS) in patients with GC. Additionally, functional enrichment revealed that GSDMs may be involved in endopeptidase activity, peptidase regulatory activity, and cysteine peptidase activity. GSDMs correlated with infiltration levels of immune cells in GC, and GSDME correlated with the infiltrating level of CD4+ T, CD8+ T, neutrophils, macrophages, and dendritic cells. This study indicated the potential diagnostic and prognostic value of GSDMs in GC. Our results showed that GSDME could play a significant oncogenic role in GC diagnosis and prognosis. However, our bioinformatics analyses should be validated in further prospective studies.

由于在各种癌症中的作用,热蛋白沉积引起了人们的关注。最近,有报道称参与化脓过程的气敏蛋白(GSDMs)与多种癌症有关。然而,GSDMs的表达在胃癌(GC)的诊断和预后中的作用仍不甚明了。我们分析了 TIMER、UALCAN、人类蛋白质图谱(HPA)、GEPIA 和 Kaplan-Meier Plotter 数据库中的转录和预后信息以及 GSDMs 在胃癌患者中的作用。cBioPortal 平台用于发现 GSDMs 的基因改变、意义和网络。此外,还利用 STRING、Cytoscape 和 TIMER 来探索功能富集和免疫调节。在TIMER数据库中,GSDMB、GSDMC、GSDMD和GSDME在GC中的表达高于正常组织。此外,两个数据库的生存分析表明,GSDME的高表达与GC患者较短的总生存期(OS)有关。此外,功能富集显示 GSDMs 可能参与了内肽酶活性、肽酶调节活性和半胱氨酸肽酶活性。GSDMs 与 GC 免疫细胞的浸润水平相关,GSDME 与 CD4+ T、CD8+ T、中性粒细胞、巨噬细胞和树突状细胞的浸润水平相关。这项研究表明,GSDMs 在 GC 中具有潜在的诊断和预后价值。我们的研究结果表明,GSDME 在 GC 的诊断和预后中可发挥重要的致癌作用。然而,我们的生物信息学分析还需要在进一步的前瞻性研究中加以验证。
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引用次数: 0
Poricoic acid A attenuates renal fibrosis by inhibiting endoplasmic reticulum stress-mediated apoptosis. 茯苓酸 A 可通过抑制内质网应激介导的细胞凋亡减轻肾脏纤维化。
IF 1.9 4区 医学 Q2 BIOLOGY Pub Date : 2024-11-25 eCollection Date: 2024-01-01 DOI: 10.1590/1414-431X2024e14249
Hui Zhao, Tian Liu, Chang-E Yang, Yue-Huan Hu, Yan Niu, Sheng-Ping Lei, Lin Chen, Ming-Xia Zhang

Renal fibrosis is a common manifestation in the progression of chronic kidney disease (CKD) to kidney failure. Currently, there is no available therapy to prevent the progression of renal fibrosis. Poricoic acid A (PAA) isolated from Poria cocos shows notable antifibrotic effects. However, its potential mechanism is still unclear. This study aimed to evaluate the effects and the potential mechanisms of PAA against renal fibrosis. A mouse model of renal fibrosis was established using unilateral ureteral obstruction (UUO). We showed that PAA administration significantly alleviated renal lesions and collagen deposition in UUO mice. Mice with UUO resulted in epithelial-to-mesenchymal transition (EMT) and the activation of endoplasmic reticulum stress (ERS) in the renal tissues, while PAA treatment significantly inhibited EMT and ERS activation. Additionally, PAA markedly alleviated ERS-mediated apoptosis in UUO mice. Molecular docking results indicated that PAA stably combined to GRP78 and ATF4. In conclusion, these results demonstrated that PAA possesses a significant bioactivity against renal fibrosis and its treatment mechanism might be the inhibition of ERS-mediated apoptosis.

肾脏纤维化是慢性肾脏病(CKD)发展到肾衰竭的常见表现。目前,还没有可用的疗法来预防肾脏纤维化的发展。从茯苓中分离出的茯苓酸 A(PAA)具有显著的抗纤维化作用。然而,其潜在机制仍不清楚。本研究旨在评估 PAA 抗肾脏纤维化的效果和潜在机制。我们利用单侧输尿管梗阻(UUO)建立了小鼠肾脏纤维化模型。结果表明,服用 PAA 能明显减轻 UUO 小鼠的肾脏病变和胶原沉积。UUO 小鼠导致肾组织上皮细胞向间质转化(EMT)和内质网应激(ERS)的激活,而 PAA 治疗可明显抑制 EMT 和 ERS 的激活。此外,PAA 还能明显缓解 ERS 介导的 UUO 小鼠细胞凋亡。分子对接结果表明,PAA 能稳定地与 GRP78 和 ATF4 结合。总之,这些结果表明 PAA 对肾脏纤维化具有显著的生物活性,其治疗机制可能是抑制 ERS 介导的细胞凋亡。
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Brazilian Journal of Medical and Biological Research
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