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Establishing an AI model and application for automated capsule endoscopy recognition based on convolutional neural networks (with video). 建立基于卷积神经网络的胶囊内镜自动识别人工智能模型及应用(附视频)。
IF 2.5 3区 医学 Q2 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2024-11-06 DOI: 10.1186/s12876-024-03482-7
Jian Chen, Kaijian Xia, Zihao Zhang, Yu Ding, Ganhong Wang, Xiaodan Xu

Background: Although capsule endoscopy (CE) is a crucial tool for diagnosing small bowel diseases, the need to process a vast number of images imposes a significant workload on physicians, leading to a high risk of missed diagnoses. This study aims to develop an artificial intelligence (AI) model and application based on convolutional neural networks that can automatically recognize various lesions in small bowel capsule endoscopy.

Methods: Three small bowel capsule endoscopy datasets were used for AI model training, validation, and testing, encompassing 12 categories of images. The model's performance was evaluated using metrics such as AUC, sensitivity, specificity, precision, accuracy, and F1 score to select the best model. A human-machine comparison experiment was conducted using the best model and endoscopists with varying levels of experience. Model interpretability was analyzed using Grad-CAM and SHAP techniques. Finally, a clinical application was developed based on the best model using PyQt5 technology.

Results: A total of 34,303 images were included in this study. The best model, MobileNetv3-large, achieved a weighted average sensitivity of 87.17%, specificity of 98.77%, and an AUC of 0.9897 across all categories. The application developed based on this model performed exceptionally well in comparison with endoscopists, achieving an accuracy of 87.17% and a processing speed of 75.04 frames per second, surpassing endoscopists of varying experience levels.

Conclusion: The AI model and application developed based on convolutional neural networks can quickly and accurately identify 12 types of small bowel lesions. With its high sensitivity, this system can effectively assist physicians in interpreting small bowel capsule endoscopy images.Future studies will validate the AI system for video evaluations and real-world clinical integration.

背景:尽管胶囊内镜(CE)是诊断小肠疾病的重要工具,但需要处理大量图像给医生带来了巨大的工作量,导致漏诊的风险很高。本研究旨在开发一种基于卷积神经网络的人工智能(AI)模型和应用,它能自动识别小肠胶囊内镜检查中的各种病变:方法: 使用三个小肠胶囊内窥镜数据集进行人工智能模型的训练、验证和测试,包括 12 类图像。使用 AUC、灵敏度、特异性、精确度、准确度和 F1 分数等指标对模型的性能进行评估,以选出最佳模型。使用最佳模型和具有不同经验水平的内窥镜医师进行了人机对比实验。使用 Grad-CAM 和 SHAP 技术分析了模型的可解释性。最后,在最佳模型的基础上,使用 PyQt5 技术开发了一个临床应用:本研究共收录了 34,303 幅图像。最佳模型 MobileNetv3-large 在所有类别中的加权平均灵敏度为 87.17%,特异度为 98.77%,AUC 为 0.9897。基于该模型开发的应用程序与内镜医师相比表现优异,准确率达到 87.17%,处理速度达到每秒 75.04 帧,超过了不同经验水平的内镜医师:结论:基于卷积神经网络开发的人工智能模型和应用程序可以快速准确地识别 12 种小肠病变。该系统灵敏度高,能有效协助医生解读小肠胶囊内镜图像。未来的研究将验证该人工智能系统在视频评估和实际临床整合方面的有效性。
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引用次数: 0
The impact of relaxing the requirements for dyspeptic Symptom Onset frequency or duration in Rome IV Criteria on the Symptom Pattern and diagnosis of functional dyspepsia. 放宽罗马 IV 标准中对消化不良症状发作频率或持续时间的要求对症状模式和功能性消化不良诊断的影响。
IF 2.5 3区 医学 Q2 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2024-11-05 DOI: 10.1186/s12876-024-03486-3
Jinsheng Wang, Junhao Wu, Xiaohua Hou, Lei Zhang

Background: The Rome IV criteria for functional dyspepsia (FD) has strict requirements for symptom frequency and onset duration, making it difficult for patients to meet these criteria in clinical practice. This study aimed to investigate the impact of relaxing the Rome IV criteria on the diagnosis and symptom pattern of FD.

Methods: A cross-sectional, multi-center study was conducted involving 2935 consecutive broadly defined FD patients without positive findings on upper gastrointestinal endoscopy or routine examinations. Questionnaires were used to collect demographic and upper gastrointestinal symptom data. Symptom pattern was compared between Rome IV criteria defined FD patients and those defined by relaxed Rome IV criteria.

Results: Only 22.2% of broadly defined FD patients rigorously fulfilled Rome IV criteria. No significant difference was found for proportion of patients with dyspeptic symptoms, dysmotility-like symptoms, reflux-like symptoms, as well as severity and onset frequency of dyspeptic symptoms (all P > 0.05), between patients who didn't fulfill Rome IV criteria for FD solely due to a duration of 3-6 months and Rome IV criteria defined FD patients. Patients with broadly defined postprandial distress syndrome (PDS) who didn't fulfill Rome IV criteria solely due to a symptom frequency of 1-2 days per week had significantly lower symptom severity (P < 0.001), but similar postprandial symptom characteristics compared to those defined by the Rome IV criteria.

Conclusions: A symptom duration criterion of 3 months may be sufficient for diagnosing FD. Reducing the symptom onset frequency to no less than 1 day per week in the Rome IV criteria for PDS does not affect its postprandial symptom characteristics.

背景:功能性消化不良(FD)的罗马IV标准对症状频率和发病持续时间有严格要求,这使得患者在临床实践中很难达到这些标准。本研究旨在探讨放宽罗马 IV 标准对功能性消化不良的诊断和症状模式的影响:这项横断面多中心研究涉及 2935 名连续的广义 FD 患者,他们在上消化道内窥镜检查或常规检查中均未发现阳性结果。研究采用问卷调查的方式收集人口统计学和上消化道症状数据。结果发现,只有22.2%的广义FD患者有上消化道症状:结果:广义 FD 患者中只有 22.2% 严格符合罗马 IV 标准。仅因病程为 3-6 个月而不符合罗马 IV 标准的 FD 患者与罗马 IV 标准定义的 FD 患者之间,在消化不良症状、运动障碍样症状、反流样症状的患者比例以及消化不良症状的严重程度和发病频率方面均无明显差异(均为 P > 0.05)。广义的餐后不适综合征(PDS)患者如果仅因每周 1-2 天的症状频率而不符合罗马 IV 标准,则其症状严重程度明显较低(P 结论:餐后不适综合征的症状持续时间标准为 3 个月:3个月的症状持续时间标准可能足以诊断FD。将 PDS 的罗马 IV 标准中的症状发作频率降至每周不少于 1 天并不会影响其餐后症状特征。
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引用次数: 0
Correction: Effect and potential mechanism of oncometabolite succinate promotes distant metastasis of colorectal cancer by activating STAT3. 更正:琥珀酸酯通过激活 STAT3 促进结直肠癌远处转移的作用和潜在机制。
IF 2.5 3区 医学 Q2 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2024-11-05 DOI: 10.1186/s12876-024-03478-3
Jiangnan Yu, Hong Yang, Lin Zhang, Suye Ran, Qing Shi, Pailan Peng, Qi Liu, Lingyu Song
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引用次数: 0
Blood lipid profiles associated with metastatic sites in advanced gastric cancer. 与晚期胃癌转移部位相关的血脂特征
IF 2.5 3区 医学 Q2 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2024-11-04 DOI: 10.1186/s12876-024-03479-2
Hui Zhang, Yiming Liu, Li Feng, Long Wang, Jing Han, Xue Zhang, Yudong Wang, Dan Li, Jiayin Liu, Yan Liu, Hui Jin, Zhisong Fan

Background: This study explored the correlation between peripheral blood lipid levels and clinicopathological parameters in patients with advanced gastric cancer (GC), focusing on changes in lipid levels during disease progression.

Methods: Pathological features and serum lipid profiles of 179 patients with stage III-IV gastric adenocarcinoma were analyzed. Lipid parameters examined included total cholesterol (TC), triglycerides (TG), high-density lipoprotein cholesterol (HDL-C), low-density lipoprotein cholesterol (LDL-C), very low-density lipoprotein cholesterol (VLDL-C), apolipoprotein AI (Apo AI), apolipoprotein B (Apo B), lipoprotein(a) (Lp(a)), among others. The total cholesterol-lymphocyte score (TL score) and BMI were also calculated. The association between lipid parameters and clinicopathological characteristics such as age, gender, family history, and metastasis sites was assessed.

Results: In GC patients, females had higher TG levels than males. Patients with peritoneal metastasis had significantly lower levels of TC, LDL-C, Apo B, and B/A ratio. Those with lung metastasis exhibited higher LDL-C levels and lower levels of VLDL-C. No significant associations were found between lipid levels and metastasis to distant lymph nodes, liver, or bone. Female patients with ovarian metastasis had significantly lower VLDL-C levels. Multivariate analysis revealed low TC as an independent risk factor for peritoneal metastasis, high LDL-C and low VLDL-C levels for lung metastasis, and younger age and low VLDL-C for ovarian metastasis.

Conclusion: Specific blood lipid levels are significantly associated with metastatic sites in advanced gastric cancer. Lipid profiles could serve as potential biomarkers for predicting metastatic sites in GC patients.

背景:本研究探讨了晚期胃癌(GC)患者外周血脂水平与临床病理参数的相关性:本研究探讨了晚期胃癌(GC)患者外周血脂水平与临床病理参数之间的相关性,重点关注疾病进展过程中血脂水平的变化:分析了179例III-IV期胃癌患者的病理特征和血清脂质谱。检查的血脂参数包括总胆固醇(TC)、甘油三酯(TG)、高密度脂蛋白胆固醇(HDL-C)、低密度脂蛋白胆固醇(LDL-C)、极低密度脂蛋白胆固醇(VLDL-C)、载脂蛋白AI(载脂蛋白AI)、载脂蛋白B(载脂蛋白B)、脂蛋白(a)(Lp(a))等。此外,还计算了总胆固醇-淋巴细胞评分(TL 评分)和体重指数。评估了血脂参数与年龄、性别、家族史和转移部位等临床病理特征之间的关联:结果:在 GC 患者中,女性的 TG 水平高于男性。腹膜转移患者的TC、LDL-C、载脂蛋白B和B/A比值水平明显较低。肺转移患者的 LDL-C 水平较高,VLDL-C 水平较低。未发现血脂水平与远处淋巴结、肝脏或骨骼转移之间存在明显关联。卵巢转移的女性患者的 VLDL-C 水平明显较低。多变量分析显示,低TC是腹膜转移的独立危险因素,高LDL-C和低VLDL-C水平是肺转移的独立危险因素,年龄较小和低VLDL-C是卵巢转移的独立危险因素:结论:特定的血脂水平与晚期胃癌的转移部位密切相关。结论:特定的血脂水平与晚期胃癌的转移部位明显相关,血脂谱可作为预测胃癌患者转移部位的潜在生物标志物。
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引用次数: 0
Association between the triglyceride to high density lipoprotein cholesterol ratio and the incidence of metabolic dysfunction-associated fatty liver disease: a retrospective cohort study. 甘油三酯与高密度脂蛋白胆固醇比率与代谢功能障碍相关性脂肪肝发病率之间的关系:一项回顾性队列研究。
IF 2.5 3区 医学 Q2 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2024-11-01 DOI: 10.1186/s12876-024-03471-w
Xiangming Ma, Jianguo Jia, Haozhe Cui, Jing Zhou, Fei Tian, Jingtao Yang, Yali Zhang, Jiaying Dai, Liying Cao

Background: The triglyceride to high density lipoprotein cholesterol ratio (TG/HDL-C) is a confirmed predictive factor for insulin resistance and is suggested to be closely related to metabolic dysfunction-associated fatty liver disease (MAFLD), but previous research is inconclusive. The association between TG/HDL-C and MAFLD incidence was further explored in this large-sample, long-term retrospective cohort study.

Methods: Individuals who participated in the Kailuan Group health examination from July 2006 to December 2007 (n = 49,518) were included. Data from anthropometric and biochemical indices, epidemiological surveys, and liver ultrasound examinations were collected and analysed statistically, focusing on the association between TG/HDL-C and the incidence of MAFLD.

Results: During a mean follow-up period of 7.62 ± 3.99 years, 24,838 participants developed MAFLD. The cumulative MAFLD incidence rates associated with the first to fourth quartiles of TG/HDL-C were 59.16%, 65.04%, 71.27%, and 79.28%, respectively. The multivariate Cox proportional hazards regression model revealed that the hazard ratios (HRs) (95% CIs) for MAFLD in the second, third, and fourth quartiles were 1.20 (1.16-1.25), 1.50 (1.45-1.56), and 2.02 (1.95-2.10) (P for trend < 0.05), respectively, and the HR (95% CI) corresponding to an increase of one standard deviation in TG/HDL-C was 1.10 (1.09-1.11) (P < 0.05). Subsequent subgroup and sensitivity analyses yielded results similar to those of the main analyses.

Conclusions: TG/HDL-C is independently associated with MAFLD risk, with higher TG/HDL-C indicating greater MAFLD risk.

背景:甘油三酯与高密度脂蛋白胆固醇比值(TG/HDL-C)是胰岛素抵抗的确证预测因素,并被认为与代谢功能障碍相关性脂肪肝(MAFLD)密切相关,但以往的研究尚无定论。这项大样本、长期回顾性队列研究进一步探讨了 TG/HDL-C 与 MAFLD 发病率之间的关系:方法:纳入 2006 年 7 月至 2007 年 12 月参加开滦集团健康体检的人群(n = 49,518 人)。研究收集了人体测量和生化指标、流行病学调查以及肝脏超声检查的数据,并进行了统计分析,重点研究了TG/HDL-C与MAFLD发病率之间的关系:结果:在平均 7.62 ± 3.99 年的随访期间,有 24 838 名参与者患上了 MAFLD。与 TG/HDL-C 第一至第四四分位数相关的 MAFLD 累计发病率分别为 59.16%、65.04%、71.27% 和 79.28%。多变量 Cox 比例危险回归模型显示,第二、第三和第四四分位数的 MAFLD 危险比(HRs)(95% CIs)分别为 1.20(1.16-1.25)、1.50(1.45-1.56)和 2.02(1.95-2.10)(P 为趋势结论):TG/HDL-C与MAFLD风险独立相关,TG/HDL-C越高表明MAFLD风险越大。
{"title":"Association between the triglyceride to high density lipoprotein cholesterol ratio and the incidence of metabolic dysfunction-associated fatty liver disease: a retrospective cohort study.","authors":"Xiangming Ma, Jianguo Jia, Haozhe Cui, Jing Zhou, Fei Tian, Jingtao Yang, Yali Zhang, Jiaying Dai, Liying Cao","doi":"10.1186/s12876-024-03471-w","DOIUrl":"10.1186/s12876-024-03471-w","url":null,"abstract":"<p><strong>Background: </strong>The triglyceride to high density lipoprotein cholesterol ratio (TG/HDL-C) is a confirmed predictive factor for insulin resistance and is suggested to be closely related to metabolic dysfunction-associated fatty liver disease (MAFLD), but previous research is inconclusive. The association between TG/HDL-C and MAFLD incidence was further explored in this large-sample, long-term retrospective cohort study.</p><p><strong>Methods: </strong>Individuals who participated in the Kailuan Group health examination from July 2006 to December 2007 (n = 49,518) were included. Data from anthropometric and biochemical indices, epidemiological surveys, and liver ultrasound examinations were collected and analysed statistically, focusing on the association between TG/HDL-C and the incidence of MAFLD.</p><p><strong>Results: </strong>During a mean follow-up period of 7.62 ± 3.99 years, 24,838 participants developed MAFLD. The cumulative MAFLD incidence rates associated with the first to fourth quartiles of TG/HDL-C were 59.16%, 65.04%, 71.27%, and 79.28%, respectively. The multivariate Cox proportional hazards regression model revealed that the hazard ratios (HRs) (95% CIs) for MAFLD in the second, third, and fourth quartiles were 1.20 (1.16-1.25), 1.50 (1.45-1.56), and 2.02 (1.95-2.10) (P for trend < 0.05), respectively, and the HR (95% CI) corresponding to an increase of one standard deviation in TG/HDL-C was 1.10 (1.09-1.11) (P < 0.05). Subsequent subgroup and sensitivity analyses yielded results similar to those of the main analyses.</p><p><strong>Conclusions: </strong>TG/HDL-C is independently associated with MAFLD risk, with higher TG/HDL-C indicating greater MAFLD risk.</p>","PeriodicalId":9129,"journal":{"name":"BMC Gastroenterology","volume":"24 1","pages":"389"},"PeriodicalIF":2.5,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11528993/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142563732","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
ICG-r15 predicts esophageal varices in compensated liver cirrhosis: a noninvasive approach. ICG-r15 预测代偿期肝硬化食管静脉曲张:一种无创方法。
IF 2.5 3区 医学 Q2 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2024-11-01 DOI: 10.1186/s12876-024-03407-4
Xu Han, Xiao-Jing Cheng, Min Gao, Chun-Yan Wang, Li-Li Zhao, Yong-Feng Yang, Jia Li

Objective: The aim of our study was to evaluate the indocyanine green (ICG) retention test as a noninvasive marker of esophageal varices(EV).

Methods: The clinical data of patients diagnosed with compensated liver cirrhosis in Tianjin Second People's Hospital between January 2018 and January 2021 were analysed with SPSS 23.0.

Result: A total of 144 patients (88 M/56 F, 51.7 ± 11.06 years) were enrolled. The ICG retention at 15 min(ICG-r15), PVD, TBIL, Cholinesterase(CHE), AST to ALT ratio(ARR), APRI, splenic area, Lok index, Park index and liver stiffness measurement in the absent or small EV group were lower than those in the medium or large EV group, while the ICG disappareance rate(ICG-K), Effective hepatic blood flow(EHBF), ALB, PLT, and Platelet to Spleen Diameter Ratio(PSDR) were higher, and the differences were significant (P < 0.05). ICG-r15, splenic area, APRI and PLT were independent predictors for medium or large esophageal varices (OR = 1.115, 1.025, 0.281, and 0.987, respectively,P < 0.05). The predictive value of ICG-r15 for medium or large varices was 17.95%, the specificity was 0.849, and the sensitivity was 0.662, the AUROC was 0.815. The cut-off value of PLT for M/L EV was 113.5, and the specificity and sensitivity were 0.616 and 0.887, the AUROC was 0.759. The AUROC of ICG-r15 combined with PLT was 0.866, which was more superior than others.

Conclusion: Although we are far from the replacement of endoscopy, ICG-r15 combined with PLT seems to be able to identify patients with medium or large EV in patients with compensated liver cirrhosis.

研究目的我们的研究旨在评估吲哚菁绿(ICG)保留试验作为食管静脉曲张(EV)无创标记物的作用:采用SPSS 23.0对天津市第二人民医院2018年1月至2021年1月期间确诊的肝硬化代偿期患者的临床资料进行分析:共纳入144例患者(88男/56女,51.7±11.06岁)。无EV组或小EV组的15分钟ICG留存率(ICG-r15)、PVD、TBIL、胆碱酯酶(CHE)、AST与ALT比值(ARR)、APRI、脾脏面积、Lok指数、Park指数和肝硬度测量值均低于中EV组或大EV组、而 ICG 消失率(ICG-K)、有效肝血流量(EHBF)、ALB、PLT 和血小板与脾脏直径比(PSDR)则较高,且差异有显著性(P 结论:虽然我们的研究还远不能取代 EV 的治疗,但我们认为 EV 的治疗可以在肝硬化的治疗中发挥重要作用:尽管ICG-r15和PLT还远不能取代内镜检查,但它们似乎能识别代偿期肝硬化患者中的中型或大型EV患者。
{"title":"ICG-r15 predicts esophageal varices in compensated liver cirrhosis: a noninvasive approach.","authors":"Xu Han, Xiao-Jing Cheng, Min Gao, Chun-Yan Wang, Li-Li Zhao, Yong-Feng Yang, Jia Li","doi":"10.1186/s12876-024-03407-4","DOIUrl":"10.1186/s12876-024-03407-4","url":null,"abstract":"<p><strong>Objective: </strong>The aim of our study was to evaluate the indocyanine green (ICG) retention test as a noninvasive marker of esophageal varices(EV).</p><p><strong>Methods: </strong>The clinical data of patients diagnosed with compensated liver cirrhosis in Tianjin Second People's Hospital between January 2018 and January 2021 were analysed with SPSS 23.0.</p><p><strong>Result: </strong>A total of 144 patients (88 M/56 F, 51.7 ± 11.06 years) were enrolled. The ICG retention at 15 min(ICG-r15), PVD, TBIL, Cholinesterase(CHE), AST to ALT ratio(ARR), APRI, splenic area, Lok index, Park index and liver stiffness measurement in the absent or small EV group were lower than those in the medium or large EV group, while the ICG disappareance rate(ICG-K), Effective hepatic blood flow(EHBF), ALB, PLT, and Platelet to Spleen Diameter Ratio(PSDR) were higher, and the differences were significant (P < 0.05). ICG-r15, splenic area, APRI and PLT were independent predictors for medium or large esophageal varices (OR = 1.115, 1.025, 0.281, and 0.987, respectively,P < 0.05). The predictive value of ICG-r15 for medium or large varices was 17.95%, the specificity was 0.849, and the sensitivity was 0.662, the AUROC was 0.815. The cut-off value of PLT for M/L EV was 113.5, and the specificity and sensitivity were 0.616 and 0.887, the AUROC was 0.759. The AUROC of ICG-r15 combined with PLT was 0.866, which was more superior than others.</p><p><strong>Conclusion: </strong>Although we are far from the replacement of endoscopy, ICG-r15 combined with PLT seems to be able to identify patients with medium or large EV in patients with compensated liver cirrhosis.</p>","PeriodicalId":9129,"journal":{"name":"BMC Gastroenterology","volume":"24 1","pages":"390"},"PeriodicalIF":2.5,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11529008/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142563735","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Construction of a combined prognostic model for pancreatic ductal adenocarcinoma based on deep learning and digital pathology images. 基于深度学习和数字病理图像构建胰腺导管腺癌综合预后模型。
IF 2.5 3区 医学 Q2 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2024-10-31 DOI: 10.1186/s12876-024-03469-4
Kaixin Hu, Chenyang Bian, Jiayin Yu, Dawei Jiang, Zhangjun Chen, Fengqing Zhao, Huangbao Li

Background: Deep learning has made significant advancements in the field of digital pathology, and the integration of multiple models has further improved accuracy. In this study, we aimed to construct a combined prognostic model using deep learning-extracted features from digital pathology images of pancreatic ductal adenocarcinoma (PDAC) alongside clinical predictive indicators and to explore its prognostic value.

Methods: A retrospective analysis was conducted on 142 postoperative pathologically confirmed PDAC cases. These cases were divided into training (n = 114) and testing sets (n = 28) at an 8:2 ratio. Tumor whole-slide imaging features were extracted and screened to construct a pathological risk model based on a pre-trained deep learning model. Clinical and pathological data from the training set were used to select independent predictive factors for PDAC and establish a clinical risk model using LASSO, univariate, and multivariate Cox regression analyses. Based on the pathological and clinical risk models, a combined model was developed. The Harrell concordance index (C-index) was computed to assess the predictive performance of each model for PDAC survival prognosis.

Results: For the training and testing sets, the C-index values for the clinical risk model were 0.76 and 0.75, respectively; for the pathological risk model, they were 0.82 and 0.73, respectively; and for the combined model, they were 0.86 and 0.77, respectively. The combined model exhibited appropriate calibration at 1-, 3-, and 5-year time points, as well as a superior area under the curve of the receiver operating characteristic curve and clinical net benefit compared to the single models.

Conclusions: Integrating the pathological and clinical risk models may provide a higher predictive value for survival prognosis.

背景:深度学习在数字病理学领域取得了重大进展,多种模型的整合进一步提高了准确性。在本研究中,我们旨在利用深度学习从胰腺导管腺癌(PDAC)数字病理图像中提取的特征,结合临床预测指标构建一个综合预后模型,并探讨其预后价值:对142例术后病理确诊的PDAC病例进行了回顾性分析。这些病例按 8:2 的比例分为训练集(n = 114)和测试集(n = 28)。根据预先训练好的深度学习模型,提取并筛选肿瘤全切片成像特征,构建病理风险模型。利用训练集中的临床和病理数据选择 PDAC 的独立预测因素,并使用 LASSO、单变量和多变量 Cox 回归分析建立临床风险模型。在病理和临床风险模型的基础上,建立了一个综合模型。计算了哈雷尔一致性指数(C-index),以评估每个模型对PDAC生存预后的预测性能:结果:在训练集和测试集中,临床风险模型的 C-index 值分别为 0.76 和 0.75;病理风险模型的 C-index 值分别为 0.82 和 0.73;综合模型的 C-index 值分别为 0.86 和 0.77。与单一模型相比,综合模型在1年、3年和5年时间点均表现出适当的校准,接收者操作特征曲线下面积和临床净获益也更优:结论:整合病理和临床风险模型可为生存预后提供更高的预测价值。
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引用次数: 0
Endoscopic morphology of gastric MALT lymphoma correlate with API2/MALT1 fusion and predict treatment response after helicobacter pylori eradication. 胃 MALT 淋巴瘤的内镜形态与 API2/MALT1 融合相关,并可预测幽门螺杆菌根除后的治疗反应。
IF 2.5 3区 医学 Q2 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2024-10-31 DOI: 10.1186/s12876-024-03476-5
Bing-Can Yang, Hai-Lin Yan, Xin-Yue Luo, Yu-Qiang Liu, Jin-Lin Yang, Zhu Wang

Background: The presence of API2/MALT1 fusion in gastric mucosa-associated lymphoid tissue (MALT) lymphoma predicts poor response to Helicobacter pylori (Hp) eradication therapy. This study aimed to assess the correlation between endoscopic morphology of MALT lymphoma and API2/MALT1 fusion and evaluate treatment response to Hp eradication based on morphological subtypes.

Methods: A retrospective review was conducted on patients diagnosed with gastric MALT lymphoma between January 2011 and December 2022. Endoscopic morphology was categorized as superficial, non-superficial, or mixed type. The superficial type was further classified into gastritis superficial lesion and localized superficial lesion based on border clarity. Logistic regression models evaluated the impact of clinical and endoscopic characteristics on anti-Hp therapy effectiveness.

Results: Among the 114 patients included, 93 (81.6%) were Hp-positive, and API2/MALT1 fusion was detected in 58 (50.9%) cases, The superficial type was the predominate morphology (73/114, 64%). The regular arrangement of collecting venules (RAC) sign was noted in 21 (18.4%) cases. In superficial subtypes, the RAC signs were more frequently observed in localized lesion than gastritis lesion (35.6% vs. 7.1%, p = 0.01). and the superficial localized lesion was more common in individuals with positive API/MALT1 fusion than negative ones (76.9% vs. 44.1%, p = 0.01). Following Hp eradication, the remission rate for localized lesion was 34.3%, significantly lower than for gastritis lesion (66.7%, p = 0.01). Both endoscopic morphology (OR = 0.26, 95% CI 0.09-0.75) and API2-MALT1 fusion (OR = 14.29, 95% CI 4.19-48.67) impacted the efficacy of anti-Hp therapy. However, multivariate analysis identified API2-MALT1 fusion as the only independent predictor of treatment outcome (OR = 12.18, 95% CI 3.49-42.55, p < 0.001).

Conclusion: Gastric MALT lymphomas with superficial-type morphology, particularly those with defined borders resembling early gastric cancer, were associated with API2/MALT1 fusion and a lower remission rate after Hp eradication therapy. This suggests that endoscopic morphology, along with API2/MALT1 fusion status, could help predict the therapeutic response, with API2/MALT1 fusion serving as a critical indicator of treatment resistance.

背景:胃黏膜相关淋巴组织(MALT)淋巴瘤中API2/MALT1融合的存在预示着幽门螺杆菌(Hp)根除疗法的不良反应。本研究旨在评估MALT淋巴瘤内镜形态与API2/MALT1融合之间的相关性,并根据形态亚型评估根除Hp治疗的反应:对2011年1月至2022年12月期间确诊的胃MALT淋巴瘤患者进行回顾性研究。内镜形态分为浅表型、非浅表型和混合型。浅表型又根据边界清晰度分为胃炎浅表病变和局部浅表病变。逻辑回归模型评估了临床和内镜特征对抗 HP 治疗效果的影响:在纳入的 114 例患者中,93 例(81.6%)Hp 阳性,58 例(50.9%)检测到 API2/MALT1 融合,浅表型是主要形态(73/114,64%)。有 21 个病例(18.4%)出现集合静脉规则排列(RAC)征。在浅表亚型中,局部病变比胃炎病变更常观察到 RAC 征(35.6% 对 7.1%,P = 0.01),浅表局部病变在 API/MALT1 融合阳性者中比阴性者更常见(76.9% 对 44.1%,P = 0.01)。根除Hp后,局部病变的缓解率为34.3%,明显低于胃炎病变(66.7%,P = 0.01)。内镜形态(OR = 0.26,95% CI 0.09-0.75)和 API2-MALT1 融合(OR = 14.29,95% CI 4.19-48.67)都会影响抗 Hp 治疗的效果。然而,多变量分析发现,API2-MALT1 融合是治疗结果的唯一独立预测因子(OR = 12.18,95% CI 3.49-42.55,P 结论:API2-MALT1 融合是胃 MALT 淋巴瘤治疗结果的唯一独立预测因子:具有浅表型形态的胃MALT淋巴瘤,尤其是边界清晰、类似早期胃癌的胃MALT淋巴瘤,与API2/MALT1融合和根除Hp治疗后较低的缓解率有关。这表明,内镜形态与API2/MALT1融合状态有助于预测治疗反应,而API2/MALT1融合则是治疗耐药的关键指标。
{"title":"Endoscopic morphology of gastric MALT lymphoma correlate with API2/MALT1 fusion and predict treatment response after helicobacter pylori eradication.","authors":"Bing-Can Yang, Hai-Lin Yan, Xin-Yue Luo, Yu-Qiang Liu, Jin-Lin Yang, Zhu Wang","doi":"10.1186/s12876-024-03476-5","DOIUrl":"10.1186/s12876-024-03476-5","url":null,"abstract":"<p><strong>Background: </strong>The presence of API2/MALT1 fusion in gastric mucosa-associated lymphoid tissue (MALT) lymphoma predicts poor response to Helicobacter pylori (Hp) eradication therapy. This study aimed to assess the correlation between endoscopic morphology of MALT lymphoma and API2/MALT1 fusion and evaluate treatment response to Hp eradication based on morphological subtypes.</p><p><strong>Methods: </strong>A retrospective review was conducted on patients diagnosed with gastric MALT lymphoma between January 2011 and December 2022. Endoscopic morphology was categorized as superficial, non-superficial, or mixed type. The superficial type was further classified into gastritis superficial lesion and localized superficial lesion based on border clarity. Logistic regression models evaluated the impact of clinical and endoscopic characteristics on anti-Hp therapy effectiveness.</p><p><strong>Results: </strong>Among the 114 patients included, 93 (81.6%) were Hp-positive, and API2/MALT1 fusion was detected in 58 (50.9%) cases, The superficial type was the predominate morphology (73/114, 64%). The regular arrangement of collecting venules (RAC) sign was noted in 21 (18.4%) cases. In superficial subtypes, the RAC signs were more frequently observed in localized lesion than gastritis lesion (35.6% vs. 7.1%, p = 0.01). and the superficial localized lesion was more common in individuals with positive API/MALT1 fusion than negative ones (76.9% vs. 44.1%, p = 0.01). Following Hp eradication, the remission rate for localized lesion was 34.3%, significantly lower than for gastritis lesion (66.7%, p = 0.01). Both endoscopic morphology (OR = 0.26, 95% CI 0.09-0.75) and API2-MALT1 fusion (OR = 14.29, 95% CI 4.19-48.67) impacted the efficacy of anti-Hp therapy. However, multivariate analysis identified API2-MALT1 fusion as the only independent predictor of treatment outcome (OR = 12.18, 95% CI 3.49-42.55, p < 0.001).</p><p><strong>Conclusion: </strong>Gastric MALT lymphomas with superficial-type morphology, particularly those with defined borders resembling early gastric cancer, were associated with API2/MALT1 fusion and a lower remission rate after Hp eradication therapy. This suggests that endoscopic morphology, along with API2/MALT1 fusion status, could help predict the therapeutic response, with API2/MALT1 fusion serving as a critical indicator of treatment resistance.</p>","PeriodicalId":9129,"journal":{"name":"BMC Gastroenterology","volume":"24 1","pages":"388"},"PeriodicalIF":2.5,"publicationDate":"2024-10-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11529213/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142557139","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Body posture can modulate liver stiffness measured by transient elastography: a prospective observational study. 身体姿势可调节瞬态弹性成像测量的肝脏硬度:一项前瞻性观察研究。
IF 2.5 3区 医学 Q2 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2024-10-31 DOI: 10.1186/s12876-024-03473-8
Zi-Hao Huang, Miao-Qin Deng, Yangmin Lin, Chen-Hui Ye, Ming-Hua Zheng, Yong-Ping Zheng

Background: Non-invasive measurement of liver stiffness (LS), traditionally performed in the supine position, has been established to assess liver fibrosis. However, fibrosis degree is not the sole determinant of LS, necessitating the identification of relevant confounders. One often-overlooked factor is body posture, and it remains unclear whether normal daily postures interfere with LS irrespective of fibrosis. A prospective two-group comparison study was conducted to investigate the relationship between posture and LS.

Methods: Sixty-two adults participated, divided into two groups: patients with chronic liver disease and healthy controls. Both groups were assessed using transient elastography (TE) under the supine, seated, and standing postures. Randomization was applied to the order of the two upright postures. A two-way mixed ANOVA was conducted to assess the posture-dependence of LS and its variations between two groups.

Results: Results showed that posture differentially affected LS depending on the presence of liver fibrosis. In 31 healthy individuals (baseline LS range: 3.5-6.8 kPa), a transition from the supine (5.0 ± 1.0 kPa) to seated (5.7 ± 1.4 kPa; p = 0.036) or standing (6.2 ± 1.7 kPa; p = 0.002) positions increased LS, indicating liver stiffening. Conversely, in 31 patients with varying fibrosis stages (baseline LS range: 8.8-38.2 kPa), posture decreased LS from the supine (15.9 ± 7.3 kPa) to seated (13.8 ± 6.2 kPa; p < 0.001) or standing (13.9 ± 6.2 kPa; p = 0.001) positions. No significant difference in LS was observed between the seated and standing positions in both groups (control group: 5.7 vs. 6.2 kPa, p = 0.305; patient group: 13.8 vs. 13.9 kPa, p = 1). Additionally, different postures did not elicit significant changes in the success rate (supine, 98.6 ± 4%; seated, 97.6 ± 6%; standing, 99.1 ± 3%; p = 0.258) and IQR/median value (supine, 25 ± 8%; seated, 29 ± 15%; standing, 29 ± 12%; p = 0.117), implying no impact on both measurement feasibility and reliability.

Conclusions: We demonstrated, for the first time, the feasibility of utilizing upright postures as an alternative measurement protocol for TE. We further unravel a previously unrecognized role of transitioning between different postures to assist the diagnosis of cirrhosis. The findings suggested that daily physiological activity of postural changes suffices to alter LS. Therefore, body positioning should be standardized and carefully considered when interpreting LS.

背景:肝脏僵硬度(LS)的无创测量传统上是在仰卧位进行的,已被确定用于评估肝纤维化。然而,肝纤维化程度并不是决定肝硬度的唯一因素,因此需要确定相关的混杂因素。一个经常被忽视的因素是身体姿势,目前仍不清楚无论肝纤维化程度如何,正常的日常姿势是否会干扰LS。我们进行了一项前瞻性两组比较研究,以调查姿势与 LS 之间的关系:62名成人参加了研究,分为两组:慢性肝病患者和健康对照组。两组均在仰卧、坐姿和站姿下使用瞬态弹性成像(TE)进行评估。两种直立姿势的顺序采用随机排列。采用双向混合方差分析评估 LS 的姿势依赖性及其在两组之间的变化:结果显示,肝纤维化程度不同,姿势对LS的影响也不同。在 31 名健康人(基线 LS 范围:3.5-6.8 kPa)中,从仰卧位(5.0 ± 1.0 kPa)过渡到坐位(5.7 ± 1.4 kPa; p = 0.036)或站立位(6.2 ± 1.7 kPa; p = 0.002)会增加 LS,表明肝脏变硬。相反,在 31 位不同肝纤维化阶段的患者中(基线 LS 范围:8.8-38.2 kPa),从仰卧位(15.9 ± 7.3 kPa)到坐位(13.8 ± 6.2 kPa;p 结论:我们首次证明了肝脏僵化的程度:我们首次证明了利用直立姿势作为 TE 替代测量方案的可行性。我们进一步揭示了以前未被认识到的在不同姿势之间转换的作用,以协助肝硬化的诊断。研究结果表明,姿势变化的日常生理活动足以改变LS。因此,在解释 LS 时,身体定位应标准化并仔细考虑。
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引用次数: 0
Causal relationship between hypothyroidism and ulcerative colitis: a bidirectional Mendelian randomization study. 甲状腺功能减退症与溃疡性结肠炎之间的因果关系:一项双向孟德尔随机研究。
IF 2.5 3区 医学 Q2 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2024-10-30 DOI: 10.1186/s12876-024-03461-y
Yumeng Yang, Jianhui Li, Xin Wang, Jing Ma

Objective: Ulcerative colitis (UC) and Hashimoto's thyroiditis frequently cooccur in patients with multiple autoimmune conditions, but the specific association between UC and hypothyroidism is unknown. We used Mendelian randomization (MR) methods to determine the causal relationship between UC and hypothyroidism.

Methods: We obtained single nucleotide polymorphisms (SNPs) related to ulcerative colitis (UC) and hypothyroidism from genome-wide association studies (GWAS) available in the public database of the Integrated Epidemiology Unit (IEU). To assess the causal relationship between UC and hypothyroidism, we employed MR-Egger, weighted median, inverse variance weighted (IVW), simple mode, and weighted mode methods. Sensitivity analyses were performed using Cochran's Q test, the horizontal pleiotropy test, and the leave-one-out (LOO) method to assess the reliability of the MR data. The genes corresponding to instrumental variables (IVs) were subjected to Gene Ontology (GO) functional annotation, Kyoto Encyclopedia of the Genome (KEGG) pathway enrichment analysis, and protein-protein interaction (PPI) analysis to explore the mechanisms behind the causal relationships at the gene level.

Results: Forward MR analysis indicated that hypothyroidism was associated with an increased risk of UC (IVW: P = 0.02, OR = 9.71, 95% confidence interval (CI) = 1.36-69.46). In contrast, reverse MR did not demonstrate a causal relationship between UC and hypothyroidism (IVW: P = 0.53). Sensitivity analysis proved the reliability of the results. The PPI network revealed CD247, CD80, and STAT4 as central genes. GO and KEGG analyses revealed significant enrichment of the T cell, gamma interferon (IFN-γ), and programmed cell death-1 (PD-1)/programmed cell death ligand-1 (PD-L1) pathways.

Conclusion: Hypothyroidism was a risk factor for UC. The balance of T-cell differentiation played an important role in the process of hypothyroidism-induced UC, and IL-21 might be the key to finding a cure. Enrichment of PD-1/PD-L1 might attenuate inflammation by suppressing the immune action of T cells.

目的:溃疡性结肠炎(UC)和桥本氏甲状腺炎经常同时出现在多种自身免疫性疾病患者中,但UC和甲状腺功能减退症之间的具体关系尚不清楚。我们采用孟德尔随机化(MR)方法确定了UC与甲状腺功能减退症之间的因果关系:我们从综合流行病学单位(IEU)公共数据库中的全基因组关联研究(GWAS)中获得了与溃疡性结肠炎(UC)和甲状腺功能减退症相关的单核苷酸多态性(SNPs)。为了评估 UC 与甲状腺功能减退症之间的因果关系,我们采用了 MR-Egger、加权中位数、逆方差加权(IVW)、简单模式和加权模式方法。为了评估MR数据的可靠性,我们使用Cochran's Q检验、水平多向性检验和leave-one-out(LOO)方法进行了敏感性分析。对工具变量(IV)对应的基因进行了基因本体(GO)功能注释、京都基因组百科全书(KEGG)通路富集分析和蛋白-蛋白相互作用(PPI)分析,以探索基因水平因果关系背后的机制:正向MR分析表明,甲状腺功能减退症与UC风险增加有关(IVW:P = 0.02,OR = 9.71,95%置信区间(CI)= 1.36-69.46)。相比之下,反向 MR 并未证明 UC 与甲状腺功能减退之间存在因果关系(IVW:P = 0.53)。敏感性分析证明了结果的可靠性。PPI 网络显示 CD247、CD80 和 STAT4 是中心基因。GO和KEGG分析显示,T细胞、γ干扰素(IFN-γ)和程序性细胞死亡-1(PD-1)/程序性细胞死亡配体-1(PD-L1)通路显著富集:结论:甲状腺机能减退是UC的一个危险因素。结论:甲状腺机能减退是UC的危险因素,T细胞分化的平衡在甲状腺机能减退诱发UC的过程中起着重要作用,而IL-21可能是找到治愈方法的关键。PD-1/PD-L1的富集可能会抑制T细胞的免疫作用,从而减轻炎症。
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引用次数: 0
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