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Did Moldenhawera flowers evolve through mimicry with oil-producing Malpighiaceae? Moldenhawera花是通过模仿产油的Malpighiaceae进化而来的吗?
IF 1.6 4区 生物学 Pub Date : 2023-11-29 DOI: 10.1007/s40415-023-00961-1
Luciano Paganucci de Queiroz, Jorge Antonio Silva Costa, Cristiana Barros Nascimento Costa

Floral mimicry is a captivating phenomenon wherein flowers imitate traits of other plants to attract specific pollinators. The Caesalpinioideae legumes in general have relatively unspecialized flowers, which has allowed the development of disparate morphologies adapted to different groups of pollinators. This study describes the pollination of Moldenhawera nutans L.P. Queiroz, G.P. Lewis & Allkin, and explores its potential floral mimicry toward Malpighiaceae flowers. Our investigation revealed that M. nutans is pollinated by bees of the genera Centris and Xylocopa. It also presents compelling evidence supporting the hypothesis of floral mimicry, including striking similarities in floral display, shared oil-collecting pollinators, oil collection behavior in M. nutans despite the absence of oil production, and the reliance on exogenous pollen for reproduction. These findings suggest that species of Centris visit M. nutans flowers under the mistaken impression of oil availability, subsequently transitioning to pollen collection. We explored other potential cases of floral mimicry with Malpighiaceae in the Caesalpinioideae legumes by optimizing the Malpighiaceae-like floral display on a dated phylogeny of this subfamily. However, current information does not allow us to determine whether the similarities in floral morphology represent cases of floral mimicry, phylogenetic inertia, or simple convergence. Hypothesis tests are suggested that can guide the study of these fascinating evolutionary processes in the group.

花的模仿是一种迷人的现象,花模仿其他植物的特征来吸引特定的传粉者。豆科植物通常有相对不特殊的花,这使得不同的形态发展适应不同的传粉者群体。本研究描述了Moldenhawera nutans L.P. Queiroz, G.P. Lewis &Allkin,并探索其潜在的花模仿的malpipiiaceae花。我们的调查表明,大鼠是由Centris属和Xylocopa属的蜜蜂传粉的。它还提供了令人信服的证据来支持花的模仿假说,包括在花的展示、共享的采油传粉媒介、在不产油的情况下在M. nutans中采集油的行为以及对外源花粉的依赖方面的惊人相似性。这些发现表明,Centris物种在油的可用性的错误印象下访问胡桃花,随后过渡到花粉收集。我们通过优化该亚科malpiighiaceae类花的系统发育,探索了该亚科中与malpiighiaceae类花相似的其他潜在案例。然而,目前的信息还不能让我们确定花形态的相似性是否代表了花的模仿,系统发育惰性,或简单的趋同。假设检验的建议,可以指导研究这些迷人的进化过程的群体。
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引用次数: 0
Genome-wide characterization and expression analysis of cyclic nucleotide-gated ion channels (CNGCs) gene family in Arabidopsis thaliana L. and Helianthus annuus L. for drought stress 干旱胁迫下拟南芥和向日葵环核苷酸门控离子通道(CNGCs)基因家族的全基因组特征及表达分析
IF 1.6 4区 生物学 Pub Date : 2023-11-29 DOI: 10.1007/s40415-023-00957-x
Sadaf Oranab, Hafiz Muhammad Ahmad, Sajid Fiaz, Athar Hussain, Muhammad Rizwan, Shazia Arif, Saira Ishaq, Shahnaz Zakia, Asmaa M. Abushady, Itoh Kimiko, Kotb A. Attia

Cyclic nucleotide-gated ion channels (CNGCs) genes play an important role to tolerate the abiotic stress tolerance in crop plants. The present study was designed to compare the molecular aspects of CNCG genes in Arabidopsis thaliana L. and Helianthus annuus L. using various computational tools. Through protein blast analysis, we identified nine CNGCs in H. annuus and subcellular locations indicated that these genes were unevenly distributed in various cellular components. The phylogenetic analysis of CNGCs genes was conducted among of A. thaliana, H. annuus, Gossypium hirsutum L., Brassica oleracea L. and Brassica rapa L. It was noted that in phylogenetic tree CNCG proteins of these crops were divided into four clads. Expression profiling of RNA-seq-data indicated that HanCNGC16 and HanCNGC15 play putative role under drought stress. The cis-regulatory analysis also identified several stress-responsive elements in HanCNGCs. The comparative genomics provided insights into the evolutionary history, duplication, divergence, gene gain and loss, species relationship, and structural diversity of CNGC in five species. These findings will not only provide widespread implications of CNGCs for their roles under drought stress in various crop species but also provided a reference study for the CNGC gene family in H. annuus.

环核苷酸门控离子通道(CNGCs)基因在作物抗非生物胁迫中起着重要作用。本研究旨在利用各种计算工具比较拟南芥(Arabidopsis thaliana L.)和向日葵(Helianthus annuus L.) CNCG基因的分子特征。通过蛋白母细胞分析,我们在黄杨中鉴定出9个CNGCs,亚细胞位置表明这些基因在不同细胞组分中的分布不均匀。对拟南芥(a.thaliana)、棉花(H. annus)、毛棉(Gossypium hirsutum L.)、甘蓝(Brassica ereracea L.)和油菜(Brassica rapa L.)的CNCG基因进行了系统发育分析,发现这些作物的CNCG蛋白在系统发育树上可划分为4个支系。rna -seq数据的表达谱分析表明,hangngc16和hangngc15可能在干旱胁迫下发挥作用。顺式调控分析还在hangngcs中发现了几个应激响应元件。比较基因组学对5个物种CNGC的进化史、复制、分化、基因得失、物种关系和结构多样性等方面进行了深入研究。这些研究结果不仅为CNGC基因在干旱胁迫下在不同作物中的作用提供了广泛的启示,也为棉蚜CNGC基因家族的研究提供了参考。
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引用次数: 0
Anatomical features of pollinia and caudicle in Epidendrum (Orchidaceae; Epidendroideae) 附着兰属植物花粉和茎的解剖特征Epidendroideae)
IF 1.6 4区 生物学 Pub Date : 2023-11-27 DOI: 10.1007/s40415-023-00963-z
Mariana Ferreira Alves, Fabio Pinheiro, Karen Lúcia Gama De Toni, José Fernando Andrade Baumgratz

The structural diversity of pollinia is one of the most relevant characters for the species classification in Orchidaceae. In this study, we analyzed the development of the pollinia and caudicle in Epidendrum species belonging to the subgenus Amphyglottium, one of the groups with the most variable morphology of the genus. These species have different pollination strategies (e.g., presence vs. absence of nectar) and grow in different types of habitat. Floral buds and flowers at anthesis were collected, and the usual methodology for performing anatomical studies, scanning microscopy, and confocal microscopy following established protocols. Our investigations revealed that the studied species have bithecal anthers and each theca has two pollinia and two caudicles. No interspecific variation was observed regarding the formation of the male gametophyte, indicating that is a stable character for the genus: the archesporial cells undergo a meiotic process that originates microspores, which remain united in tetrad and pass through asymmetric mitosis to form viable pollen grains. The caudicle is of the appendicular type and shows the male gametophyte formation.

花粉结构多样性是兰科植物物种分类的重要特征之一。本研究分析了附着兰属(Amphyglottium)亚属中形态变化最大的类群之一——附着兰(Epidendrum)的传粉器和尾柄的发育情况。这些物种有不同的授粉策略(例如,有无花蜜),生长在不同类型的栖息地。花蕾和花在花期被收集,通常的方法进行解剖研究,扫描显微镜和共聚焦显微镜下建立的协议。我们的调查表明,所研究的物种具有双掌花药,每个花药有两个传粉器和两个茎。雄性配子体的形成没有发现种间变异,表明这是该属的一个稳定特征:孢原细胞经历减数分裂过程,产生小孢子,小孢子保持四分体的统一,并通过不对称有丝分裂形成可活的花粉粒。尾柄为附属型,显示雄性配子体的形成。
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引用次数: 0
Effect of calcium on improving zinc tolerance in hydroponically grown Mentha longifolia L. through modulation of metabolic pathways and ion homeostasis 钙通过调节代谢途径和离子稳态对水培薄荷耐锌性的影响
IF 1.6 4区 生物学 Pub Date : 2023-11-23 DOI: 10.1007/s40415-023-00956-y
Giti Barzin, Neda Azadnafs, Roya Bishehkolaei

The purpose of this research was to examine the impacts of varying levels of Ca concentrations (0, 5, and 10 mM) on mint plants (Mentha longifolia L.) cultivated hydroponically, specifically under conditions of zinc (Zn) toxicity (300, and 600 μM). Various aspects, including chlorophyll and proline metabolisms, defense mechanisms (antioxidant and glyoxalase systems), ion balance, and sulfur assimilation process, were examined to assess the effects. Zn treatment resulted in the initiation of oxidative stress, hindered nutrient absorption, and led to an increase in Zn leaf concentration. These effects together contributed to the impairment of the photosynthesis apparatus and a subsequent decrease in the growth of mint seedlings. However, adding Ca by modulating proline and chlorophyll metabolisms raised proline and chlorophyll levels. Ca treatment (especially 10 mM) reduced methylglyoxal (31.1 and 38%), malondialdehyde (44.9 and 42.1%), and hydrogen peroxide (31.2 and 48.5%) levels and electrolyte leakage (22 and 30.6%) in Zn-stressed plants by strengthening the antioxidant machinery. The application of Ca by attenuating Zn amount and facilitating the uptake of mineral nutrients maintained the ionic balance under Zn toxicity. Ca addition resulted in the upregulation of enzymes associated with the sulfur metabolism, leading to elevated amounts of cysteine, glutathione, and phytochelatins. Therefore, our findings point out that Ca increased the adaptation of mint seedlings during Zn phytotoxicity by modulating proline and chlorophyll metabolism, reinforcing the antioxidant capacity, maintaining ionic homeostasis, and inducing the sulfur assimilation mechanism.

本研究的目的是研究不同钙浓度(0、5和10 mM)对水培薄荷植物(Mentha longifolia L.)的影响,特别是在锌(Zn)毒性(300和600 μM)条件下。研究了叶绿素和脯氨酸代谢、防御机制(抗氧化和乙二醛酶系统)、离子平衡和硫同化过程等各个方面的影响。锌处理引发了氧化胁迫,阻碍了养分的吸收,导致叶片锌浓度升高。这些影响共同导致了光合作用装置的损伤和随后薄荷幼苗生长的下降。然而,通过调节脯氨酸和叶绿素代谢来添加钙可以提高脯氨酸和叶绿素水平。Ca处理(特别是10 mM)通过增强抗氧化机制,降低了锌胁迫植物体内甲基乙二醛(31.1和38%)、丙二醛(44.9和42.1%)、过氧化氢(31.2和48.5%)水平和电解质泄漏(22和30.6%)。钙通过减少锌用量和促进矿质养分的吸收来维持锌中毒下的离子平衡。钙的添加导致与硫代谢相关的酶的上调,导致半胱氨酸、谷胱甘肽和植物螯合蛋白的含量升高。因此,我们的研究结果表明,钙通过调节脯氨酸和叶绿素代谢、增强抗氧化能力、维持离子稳态和诱导硫同化机制,提高了薄荷幼苗对锌毒害的适应能力。
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引用次数: 0
Biosynthesis, functional perspectives, and agricultural applications of strigolactones 独角子内酯的生物合成、功能展望及农业应用
IF 1.6 4区 生物学 Pub Date : 2023-11-20 DOI: 10.1007/s40415-023-00958-w
Ramkumar Samynathan, Baskar Venkidasamy, Mohammad Ali Shariati, Pandiyan Muthuramalingam, Muthu Thiruvengadam

Strigolactones (SLs) are carotenoid-derived terpenoid lactones. Natural SLs are grouped into two types, namely, strigol-type and orobanchol-type, and 20 SLs have been identified from different plant kingdoms or species. The more stable SLs, called GR24, derived synthetically, were utilized for the investigation of SL responses. SLs are crucial endogenous plant hormones that play a multifactorial role in plant and rhizosphere interactions by controlling mycorrhization and lateral shoot branching. SLs participate in the organization of plant architecture by reducing bud outgrowth in addition to various morphological and developmental processes, collectively with other plant growth hormones such as auxins, cytokinins, gibberellins, and abscisic acid. Strigolactones regulate root growth and structure by inhibiting lateral root production and enhancing root hair elongation. Targeted genetic engineering of SL biosynthetic genes leads to potential alterations in rooting and vegetative systems and assists in generating plants that are more appropriate to different adverse environmental conditions, such as drought, salt stress, cold, and water deficit. The present review provides a clear outline of the structure, type, biosynthesis, and signaling mechanisms of SLs. In addition, their potential functions in plant growth, development, and response to stress conditions are also discussed.

独角孤内酯(SLs)是类胡萝卜素衍生的萜类内酯。天然SLs可分为双曲醇型和八曲醇型两种类型,在不同的植物界或物种中鉴定出20种SLs。合成的更稳定的SLs称为GR24,用于研究SL响应。SLs是一种重要的植物内源激素,通过控制菌根化和芽侧分枝在植物与根际相互作用中起多因子作用。SLs除了参与多种形态和发育过程外,还与生长素、细胞分裂素、赤霉素、脱落酸等其他植物生长激素共同参与植物结构的组织。独角甾内酯通过抑制侧根产生和提高根毛伸长来调节根的生长和结构。对SL生物合成基因进行针对性的基因工程改造,可以改变植物的根系和营养系统,并有助于产生更适合不同不利环境条件(如干旱、盐胁迫、寒冷和缺水)的植物。本文综述了SLs的结构、类型、生物合成和信号机制。此外,还讨论了它们在植物生长发育和逆境响应中的潜在功能。
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引用次数: 0
The complete chloroplast genome of rabbiteye blueberry (Vaccinium ashei) and comparison with other Vaccinium species 兔眼蓝莓(vacinium ashei)叶绿体全基因组及其与其他蓝莓品种的比较
IF 1.6 4区 生物学 Pub Date : 2023-11-16 DOI: 10.1007/s40415-023-00954-0
Haiyan Yang, Chunhong Zhang, Yaqiong Wu, Wenlong Wu, Lianfei Lyu, Weilin Li

In order to clarify the characteristics of the chloroplast (cp) genome of Vaccinium ashei Reade cv. ‘brightwell’ and understand its phylogenetic status, the whole cp genome of this sepcies was sequenced and assembled, and its genome structure, gene composition, and signs of adaptation were analyzed. The cp genome has a quadripartite structure with a size of 176,115 bp and a total GC content of 36.81%. The length of large single copy (LSC) region, small single copy (SSC) region and two inverted repeat (IR) regions was 106,029 bp, 3004 bp, and 33,541 bp, respectively. It has a total of 103 genes, containing 74 protein-coding genes, 25 tRNA genes and 4 rRNA genes. A total of 187 SSR sites were observed, with the largest number of mononucleotides in the repeat type, accounting for 72% of the total. By comparing with related Vaccinium genotypes, 25 single nucleotide polymorphisms (SNPs) and 35 insertion/deletions (Indels) were identified. Highly variable regions such as trnM-psaI, trnD-psbM, psbJ-psbB, psaA-trnQ, clpP-rpoA, rpl36-rps8, rpl16-rps3, and trnM-trnL intergenic spacers may be used as candidate markers for intraspecific differentiation. The Ka/Ks calculations showed that the two genes (psbJ and psbT) were strongly positively selected. Phylogenetic results reflected that the Vaccinium genus was clustered into two clades, and V. ashei was more closely related to V. uliginosum. These results provide a reference for the development of molecular markers, phylogeny, cp genome evolution and variety breeding of Vaccinium.

摘要为了阐明白痘(vacinium ashei Reade cv)叶绿体基因组的特征。对该物种的cp全基因组进行了测序和组装,并对其基因组结构、基因组成和适应特征进行了分析。cp基因组为四分体结构,全长176,115 bp,总GC含量为36.81%。大单拷贝(LSC)区、小单拷贝(SSC)区和两个反向重复(IR)区长度分别为106,029 bp、3004 bp和33,541 bp。它共有103个基因,其中包含74个蛋白质编码基因,25个tRNA基因和4个rRNA基因。共观察到187个SSR位点,重复型单核苷酸最多,占总数的72%。通过比较相关的vacinium基因型,鉴定出25个单核苷酸多态性(snp)和35个插入/缺失(Indels)。高度可变的区域如trnM-psaI、trnD-psbM、psbJ-psbB、psaA-trnQ、clpP-rpoA、rpl36-rps8、rpl16-rps3和trnM-trnL基因间间隔可以作为种内分化的候选标记。Ka/Ks计算表明,psbJ和psbT两个基因被强正向选择。系统发育结果表明,牛痘属可划分为两个支系,与牛痘属的亲缘关系更为密切。研究结果可为Vaccinium的分子标记开发、系统发育、cp基因组进化和品种选育提供参考。
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引用次数: 0
Molecular insights into the genetic diversity and population structure of Artemisia annua L. as revealed by insertional polymorphisms. 插入多态性揭示的黄花蒿遗传多样性和种群结构的分子见解。
IF 1.4 4区 生物学 Q3 PLANT SCIENCES Pub Date : 2023-01-01 Epub Date: 2023-01-03 DOI: 10.1007/s40415-022-00860-x
Hossein Abbasi Holasou, Negar Valizadeh, Seyyed Abolghasem Mohammadi

The knowledge about the level of genetic diversity and population structure in natural populations of Artemisia annua L. is a primary step in breeding programs for development of new cultivars with higher artemisinin level and better quality of secondary metabolites composition. We used PCR-based "retrotransposon-microsatellite amplified polymorphisms" (REMAPs) to study insertional polymorphism in A. annua genome to assess genetic variability and population structure in a collection of 118 accessions collected from north and northwest of Iran. Twenty-five primer combinations of 10 retrotransposon and seven ISSR primers amplified a total of 693 clear and unambiguous fragments in the studied accessions. The average number of bands, polymorphic bands, polymorphism, effective number of alleles, Shannon's information index and expected heterozygosity were 27.72, 24.76, 88.14%, 1.47, 0.42 and 0.28, respectively. The analysis of molecular variance revealed high genetic variation present within sampled geographical regions. Distance-based cluster analysis assigned the studied accessions into four clusters according to their geographical origin, which were also confirmed by principal coordinate analysis. In model-based Bayesian clustering, the maximum value of Δk was obtained when the collection of 118 assayed A. annua accessions assigned into two subgroups (K = 2). The results showed the high genetic variation in the collection of Iranian sweet wormwood which revealed by REMAP markers indicating the reliability and efficiency of this marker system for analysis of genetic diversity and population structure of A. annua.

Supplementary information: The online version contains supplementary material available at 10.1007/s40415-022-00860-x.

了解黄花蒿(Artemisia annua L.)自然种群的遗传多样性水平和种群结构是育种计划的首要步骤,有助于培育青蒿素水平更高、次生代谢物成分质量更好的新栽培品种。我们利用基于 PCR 的 "反转座子-微卫星扩增多态性"(REMAPs)研究了黄花蒿基因组中的插入多态性,以评估从伊朗北部和西北部收集的 118 个品种的遗传变异性和种群结构。由 10 个反转座子引物和 7 个 ISSR 引物组成的 25 个引物组合共扩增出 693 个清晰明确的片段。平均条带数、多态性条带数、多态性、有效等位基因数、香农信息指数和预期杂合度分别为 27.72、24.76、88.14%、1.47、0.42 和 0.28。分子变异分析表明,采样地理区域内存在较高的遗传变异。基于距离的聚类分析根据地理起源将所研究的入选品种分为四个聚类,主坐标分析也证实了这一点。在基于模型的贝叶斯聚类分析中,当将 118 个检测的 A. annua 入选品种分为两个亚组(K = 2)时,Δk 的值最大。结果表明,REMAP 标记揭示了伊朗艾属植物的高度遗传变异,表明该标记系统在分析艾属植物遗传多样性和种群结构方面的可靠性和高效性:在线版本包含补充材料,可查阅 10.1007/s40415-022-00860-x。
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引用次数: 0
Complete chloroplast genome of Boesenbergia rotunda and a comparative analysis with members of the family Zingiberaceae. 圆叶姜叶绿体全基因组及其与姜科植物的比较分析。
IF 1.6 4区 生物学 Pub Date : 2022-01-01 Epub Date: 2022-10-26 DOI: 10.1007/s40415-022-00845-w
Yvonne Jing Mei Liew, Kah-Ooi Chua, Hoi-Sen Yong, Sze-Looi Song, Kok-Gan Chan

Boesenbergia rotunda (L.) Mansf. is a medically important ginger species of the family Zingiberaceae but its genomic information on molecular phylogeny and identification is scarce. In this work, the chloroplast genome of B. rotunda was sequenced, characterized and compared to the other Zingiberaceae species to provide chloroplast genetic resources and to determine its phylogenetic position in the family. The chloroplast genome of B. rotunda was 163,817 bp in length and consisted of a large single-copy (LSC) region of 88,302 bp, a small single-copy (SSC) region of 16,023 bp and a pair of inverted repeats (IRA and IRB) of 29,746 bp each. The chloroplast genome contained 113 unique genes, including 79 protein-coding genes, 30 transfer RNA (tRNA) genes and four ribosomal RNA (rRNA) genes. Several genes had atypical start codons, while most amino acids exhibited biased usage of synonymous codons. Comparative analyses with various chloroplast genomes of Zingiberaceae taxa revealed several highly variable regions (psbK-psbI, trnT-GGU-psbD, rbcL-accD, ndhF-rpl32, and ycf1) in the LSC and SSC regions in the chloroplast genome of B. rotunda that could be utilized as molecular markers for DNA barcoding and species delimitation. Phylogenetic analyses based on shared protein-coding genes revealed that B. rotunda formed a distinct lineage with B. kingii Mood & L.M.Prince, in a subclade that also contained the genera Kaempferia and Zingiber. These findings constitute the first chloroplast genome information of B. rotunda that could be a reference for phylogenetic analysis and identification of genus Boesenbergia within the Zingiberaceae family.

Supplementary information: The online version contains supplementary material available at 10.1007/s40415-022-00845-w.

圆形大厅(L.)Mansf。是姜科重要的药用姜种,但其分子系统发育和鉴定的基因组信息较少。本研究通过对圆形姜的叶绿体基因组进行测序、鉴定,并与其他姜科植物进行比较,以提供叶绿体遗传资源,确定其在姜科植物中的系统发育位置。圆螺旋藻叶绿体基因组全长163,817 bp,由88,302 bp的大单拷贝(LSC)区、16,023 bp的小单拷贝(SSC)区和29,746 bp的一对反向重复序列(IRA和IRB)组成。叶绿体基因组包含113个独特基因,其中蛋白质编码基因79个,tRNA基因30个,核糖体RNA基因4个。一些基因具有非典型启动密码子,而大多数氨基酸表现出同义密码子的偏见使用。通过与姜科不同分类群叶绿体基因组的比较分析,发现圆形圆菇叶绿体基因组LSC区和SSC区有几个高度可变的区域(psbK-psbI、trnT-GGU-psbD、rbcL-accD、ndhF-rpl32和ycf1),可作为DNA条形码和物种划分的分子标记。基于共同蛋白编码基因的系统发育分析表明,圆形圆孢杆菌与b.k inoii Mood和l.m.p prince在一个亚枝上形成了一个独特的谱系,该亚枝还包括山奈属和姜属。这些发现构成了圆叶姜属植物的第一个叶绿体基因组信息,可为姜科黄叶姜属植物的系统发育分析和鉴定提供参考。补充信息:在线版本包含补充资料,提供地址:10.1007/s40415-022-00845-w。
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引用次数: 1
The value of virtual natural history collections for botanical instruction in these times of the COVID-19 pandemic. 在COVID-19大流行时期,虚拟自然历史藏品对植物学教学的价值。
IF 1.6 4区 生物学 Pub Date : 2020-01-01 Epub Date: 2020-10-19 DOI: 10.1007/s40415-020-00663-y
J Hugo Cota-Sánchez
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引用次数: 5
Genetic diversity and population structure of Urochloa grass accessions from Tanzania using simple sequence repeat (SSR) markers. 利用SSR标记分析坦桑尼亚黑草种质资源的遗传多样性和群体结构。
IF 1.6 4区 生物学 Pub Date : 2018-01-01 Epub Date: 2018-07-24 DOI: 10.1007/s40415-018-0482-8
S O Kuwi, M Kyalo, C K Mutai, A Mwilawa, J Hanson, A Djikeng, S R Ghimire

Urochloa (syn.-Brachiaria s.s.) is one of the most important tropical forages that transformed livestock industries in Australia and South America. Farmers in Africa are increasingly interested in growing Urochloa to support the burgeoning livestock business, but the lack of cultivars adapted to African environments has been a major challenge. Therefore, this study examines genetic diversity of Tanzanian Urochloa accessions to provide essential information for establishing a Urochloa breeding program in Africa. A total of 36 historical Urochloa accessions initially collected from Tanzania in 1985 were analyzed for genetic variation using 24 SSR markers along with six South American commercial cultivars. These markers detected 407 alleles in the 36 Tanzania accessions and 6 commercial cultivars. Markers were highly informative with an average polymorphic information content of 0.79. The analysis of molecular variance revealed high genetic variation within individual accessions in a species (92%), fixation index of 0.05 and gene flow estimate of 4.77 showed a low genetic differentiation and a high level of gene flow among populations. An unweighted neighbor-joining tree grouped the 36 accessions and six commercial cultivars into three main clusters. The clustering of test accessions did not follow geographical origin. Similarly, population structure analysis grouped the 42 tested genotypes into three major gene pools. The results showed the Urochloa brizantha (A. Rich.) Stapf population has the highest genetic diversity (I = 0.94) with high utility in the Urochloa breeding and conservation program. As the Urochloa accessions analyzed in this study represented only 3 of 31 regions of Tanzania, further collection and characterization of materials from wider geographical areas are necessary to comprehend the whole Urochloa diversity in Tanzania.

尾藻(学名:brachiaria s.s.)是改变了澳大利亚和南美洲畜牧业的最重要的热带牧草之一。非洲的农民越来越有兴趣种植尿藻,以支持蓬勃发展的畜牧业,但缺乏适应非洲环境的品种一直是一个主要挑战。因此,本研究考察了坦桑尼亚乌克洛伊虫的遗传多样性,为在非洲建立乌克洛伊虫育种计划提供了必要的信息。利用24个SSR标记和6个南美商业品种,对1985年在坦桑尼亚采集的36份历史尿毒病种质进行了遗传变异分析。这些标记在36份坦桑尼亚材料和6个商品品种中检测到407个等位基因。标记信息丰富,平均多态性信息含量为0.79。分子变异分析表明,同一种内的遗传变异较高(92%),固定指数为0.05,基因流估计为4.77,表明种群间的遗传分化程度较低,基因流水平较高。一个不加权的邻居连接树将36个材料和6个商品品种分为3个主要集群。测试资料的聚类不遵循地理来源。同样,群体结构分析将42个测试基因型分为三个主要基因库。结果表明:毛斑尿藻(A. Rich;该种群遗传多样性最高(I = 0.94),具有较高的利用价值。由于本研究分析的Urochloa资料仅代表坦桑尼亚31个地区中的3个,因此有必要进一步收集和表征来自更广泛地理区域的材料,以了解坦桑尼亚整个Urochloa多样性。
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引用次数: 7
期刊
Brazilian Journal of Botany
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