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Machine learning predictive models and risk factors for lymph node metastasis in non-small cell lung cancer. 非小细胞肺癌淋巴结转移的机器学习预测模型和风险因素。
IF 2.6 3区 医学 Q2 RESPIRATORY SYSTEM Pub Date : 2024-10-22 DOI: 10.1186/s12890-024-03345-7
Bo Wu, Yihui Zhu, Zhuozheng Hu, Jiajun Wu, Weijun Zhou, Maoyan Si, Xiying Cao, Zhicheng Wu, Wenxiong Zhang

Background: The prognosis of non-small cell lung cancer (NSCLC) is substantially affected by lymph node metastasis (LNM), but there are no noninvasive, inexpensive methods of relatively high accuracy available to predict LNM in NSCLC patients.

Methods: Clinical data on NSCLC patients were obtained from the Surveillance, Epidemiology, and End Results (SEER) database. Risk factors for LNM were recognized LASSO and multivariate logistic regression. Six predictive models were constructed with machine learning based on risk factors. The area under the receiver operating characteristic curve (AUC) was used to assess the performance of the model. Subgroup analysis with different T-stages was performed on an optimal model. A webpage LNM risk calculator for optimal model was built using the Shinyapps.io platform.

Results: We enrolled 64,012 NSCLC patients, of whom 26,611 (41.57%) had LNM. Using multivariate logistic regression, we finally identified 10 independent risk factors for LNM: age, sex, race, histology, primary site, grade, T stage, M stage, tumor size, and bone metastases. GLM is the optimal model among all six machine learning models in both the training and validation cohorts. Subgroup analyses revealed that GLM has good predictability for populations with different T staging. A webpage LNM risk calculator based on GLM was posted on the shinyapps.io platform ( https://wubopredict.shinyapps.io/dynnomapp/ ).

Conclusion: The predictive model based on GLM can be used to precisely predict the probability of LNM in NSCLC patients, which was proven effective in all subgroup analyses according to T staging.

背景:非小细胞肺癌(NSCLC)的预后受到淋巴结转移(LNM)的严重影响,但目前还没有准确性相对较高的无创、廉价方法来预测 NSCLC 患者的淋巴结转移:方法:从监测、流行病学和最终结果(SEER)数据库中获取 NSCLC 患者的临床数据。对LNM的风险因素进行了LASSO和多变量逻辑回归识别。根据风险因素通过机器学习构建了六个预测模型。接受者操作特征曲线下面积(AUC)用于评估模型的性能。根据最佳模型对不同 T 分期进行了分组分析。我们使用 Shinyapps.io 平台建立了一个网页版 LNM 风险计算器:我们招募了64012名NSCLC患者,其中26611人(41.57%)患有LNM。通过多变量逻辑回归,我们最终确定了LNM的10个独立风险因素:年龄、性别、种族、组织学、原发部位、分级、T期、M期、肿瘤大小和骨转移。在训练组和验证组中,GLM 是所有六个机器学习模型中的最佳模型。亚组分析显示,GLM 对不同 T 分期的人群具有良好的预测能力。基于GLM的LNM风险计算器网页已发布在shinyapps.io平台上( https://wubopredict.shinyapps.io/dynnomapp/ )。结论:结论:基于GLM的预测模型可用于精确预测NSCLC患者发生LNM的概率,在根据T分期进行的所有亚组分析中均被证明有效。
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引用次数: 0
Economic burden of short-acting beta-2 agonist (SABA) overuse among asthma patients in Türkiye: a cost analysis with respect to the updated GINA treatment recommendations. 土耳其哮喘患者过度使用短效β2受体激动剂(SABA)造成的经济负担:根据最新的 GINA 治疗建议进行的成本分析。
IF 2.6 3区 医学 Q2 RESPIRATORY SYSTEM Pub Date : 2024-10-21 DOI: 10.1186/s12890-024-03327-9
Arzu Yorgancıoğlu, Kurtuluş Aksu, Ceyhun Cura, Yiğit Yaman, Melda Dinç, Simten Malhan

Background: This cost of illness study aimed to determine economic burden of short-acting β2-agonist (SABA) overuse in Türkiye from payer perspective with respect to the updated GINA 2022 treatment recommendations.

Methods: A total of 3,034,879 asthma patients comprised the study population, via estimations extrapolated from the Türkiye arm of the global SABINA III study. The economic burden (costs related to the drug use and severe exacerbations) was compared in subgroups of overall (≥ 0 canisters/year) vs. GINA-recommended (0-2 canisters/year, hypothetical population) SABA use and in subgroups of appropriate use (0-2 canisters/year, real population) vs. overuse (≥ 3 canisters/year) of SABA with extrapolation of SABINA Türkiye data to the Türkiye asthma population.

Results: Recommended SABA use was predicted to prevent 127,505 of 157,512 severe exacerbations per year in mild asthma patients and 2,668,916 of 3,262,800 severe exacerbations per year in moderate-severe asthma patients. Annual cost burden of not applying recommended SABA use (overall [≥ 0 canisters/year] vs. GINA-recommended [0-2 canisters/year] SABA use) in mild asthma and moderate-severe asthma patients was calculated to be €20.43 million and €427.65 million in terms of severe exacerbations, and to be €829,352 and €7.20 million in terms of drug costs, respectively. The total annual economic burden arising from not applying recommended SABA use was estimated to be €456.11 million. Appropriate use (0-2 canisters/year) vs. overuse (≥ 3 canisters/year) of SABA was associated with decreased frequency of severe exacerbations per year in mild asthma (from 129,878 to 27,634) and moderate-severe asthma (from 2,834,611 to 428,189) patients. SABA overuse in mild and moderate-severe asthma patients was estimated to yield an additional annual cost of €16.38 million and €385.59 million, respectively in terms of severe exacerbations, and a total €11.30 million additional drug cost. The overall annual economic burden arising from SABA overuse was estimated to be €413.27 million.

Conclusions: The estimated annual total economic burden arising from not applying recommended SABA use (€456.11 million) and SABA overuse (€413.27 million) with respect to the updated GINA 2022 treatment recommendations indicates the substantial cost burden of SABA overuse to the Turkish National Health System, corresponding up to 26% of the total direct cost of asthma reported in our country.

背景:这项疾病成本研究旨在根据最新的 GINA 2022 治疗建议,从支付方的角度确定土耳其过度使用短效 β2-激动剂 (SABA) 所造成的经济负担:根据全球 SABINA III 研究中土耳其研究组的估算,共有 3,034,879 名哮喘患者参与研究。通过将 SABINA Türkiye 数据外推至土耳其哮喘人群,比较了总体(≥ 0 罐/年)与 GINA 推荐(0-2 罐/年,假设人群)SABA 使用亚组和适当使用(0-2 罐/年,实际人群)与过度使用(≥ 3 罐/年)SABA 亚组的经济负担(与药物使用和严重恶化相关的成本):根据预测,推荐使用 SABA 可预防轻度哮喘患者每年 157,512 例严重恶化中的 127,505 例,以及中度严重哮喘患者每年 3,262,800 例严重恶化中的 2,668,916 例。根据计算,在轻度哮喘和中度重度哮喘患者中,不使用推荐的 SABA(总体[≥0 罐/年]与 GINA 推荐的[0-2 罐/年]SABA 使用)所造成的年度成本负担在严重恶化方面分别为 2,043 万欧元和 4.2765 亿欧元,在药物成本方面分别为 829,352 欧元和 720 万欧元。据估计,不使用推荐的 SABA 所造成的年度经济负担总额为 4.5611 亿欧元。适当使用(0-2 罐/年)与过度使用(≥ 3 罐/年)SABA 与轻度哮喘(从 129878 例减少到 27634 例)和中度重度哮喘(从 2834611 例减少到 428189 例)患者每年严重恶化的频率减少有关。据估计,轻度哮喘和中度重度哮喘患者过度使用 SABA 后,每年因严重哮喘加重而产生的额外费用分别为 1638 万欧元和 3.8559 亿欧元,额外药物费用共计 1130 万欧元。据估计,SABA 过度使用造成的年度总经济负担为 4.1327 亿欧元:根据最新的 GINA 2022 治疗建议,未按建议使用 SABA(4.5611 亿欧元)和过度使用 SABA(4.1327 亿欧元)造成的年度总经济负担估算表明,过度使用 SABA 对土耳其国家卫生系统造成了巨大的成本负担,相当于我国报告的哮喘直接成本总额的 26%。
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引用次数: 0
Correlation between CT-based phenotypes and serum biomarker in interstitial lung diseases. 间质性肺病的 CT 表型与血清生物标记物之间的相关性。
IF 2.6 3区 医学 Q2 RESPIRATORY SYSTEM Pub Date : 2024-10-19 DOI: 10.1186/s12890-024-03344-8
Beomsu Shin, You Jin Oh, Jonghun Kim, Sung Goo Park, Kyung Soo Lee, Ho Yun Lee

Background: The quantitative analysis of computed tomography (CT) and Krebs von den Lungen-6 (KL-6) serum level has gained importance in the diagnosis, monitoring, and prognostication of interstitial lung disease (ILD). However, the associations between quantitative analysis of CT and serum KL-6 level remain poorly understood.

Methods: In this retrospective observational study conducted at tertiary hospital between June 2020 and March 2022, quantitative analysis of CT was performed using the deep learning-based method including reticulation, ground glass opacity (GGO), honeycombing, and consolidation. We investigated the associations between CT-based phenotypes and serum KL-6 measured within three months of the CT scan. Furthermore, we evaluated the performance of the combined CT-based phenotypes and KL-6 levels in predicting hospitalizations due to respiratory reasons of ILD patients.

Results: A total of 131 ILD patients (104 males) with a median age of 67 years were included in this study. Reticulation, GGO, honeycombing, and consolidation extents showed a positive correlation with KL-6 levels. [Reticulation, correlation coefficient (r) = 0.567, p < 0.001; GGO, r = 0.355, p < 0.001; honeycombing, r = 0.174, p = 0.046; and consolidation, r = 0.446, p < 0.001]. Additionally, the area under the ROC of the combined reticulation and KL-6 for hospitalizations due to respiratory reasons was 0.810 (p < 0.001).

Conclusions: Quantitative analysis of CT features and serum KL-6 levels ascertained a positive correlation between the two. In addition, the combination of reticulation and KL-6 shows potential for predicting hospitalizations of ILD patients due to respiratory causes. The combination of reticulation, focusing on phenotypic change in lung parenchyma, and KL-6, as an indicator of lung injury extent, could be helpful for monitoring and predicting the prognosis of various types of ILD.

背景:计算机断层扫描(CT)和克雷布斯-冯登肺素-6(KL-6)血清水平的定量分析在间质性肺病(ILD)的诊断、监测和预后方面具有重要意义。然而,人们对 CT 定量分析与血清 KL-6 水平之间的关系仍然知之甚少:在这项于 2020 年 6 月至 2022 年 3 月期间在三级医院进行的回顾性观察研究中,使用基于深度学习的方法对 CT 进行了定量分析,包括网状结构、磨玻璃不透明(GGO)、蜂窝状和固结。我们研究了基于 CT 的表型与 CT 扫描后三个月内测量的血清 KL-6 之间的关联。此外,我们还评估了基于 CT 的表型和 KL-6 水平在预测 ILD 患者因呼吸原因住院方面的综合表现:本研究共纳入 131 名 ILD 患者(104 名男性),中位年龄为 67 岁。网状结构、GGO、蜂窝状和固缩程度与 KL-6 水平呈正相关。[网状结构,相关系数(r)= 0.567,p 结论:KL-6 水平与网状结构、GGO、蜂窝组织和巩固程度呈正相关:CT 特征和血清 KL-6 水平的定量分析确定了两者之间的正相关性。此外,结合网状结构和 KL-6 预测因呼吸系统原因导致的 ILD 患者的住院情况也具有潜力。网状结构侧重于肺实质的表型变化,而KL-6则是肺损伤程度的指标,两者的结合有助于监测和预测各种类型ILD的预后。
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引用次数: 0
Plasma fibrinogen level is independent risk factor associated with the incidence of pulmonary infection in patients with spinal cord injury: a retrospective cohort study. 血浆纤维蛋白原水平是与脊髓损伤患者肺部感染发病率相关的独立风险因素:一项回顾性队列研究。
IF 2.6 3区 医学 Q2 RESPIRATORY SYSTEM Pub Date : 2024-10-18 DOI: 10.1186/s12890-024-03332-y
Jinlong Zhang, Cheng Wang, Chengqi He

Background: Patients with spinal cord injury (SCI) are at higher risk of developing pulmonary infection (PI), and plasma fibrinogen level may be an independent risk factor for PI. However, the relationship between fibrinogen level and PI incidence in the SCI population remains unclear. This study aimed to elucidate the association between plasma fibrinogen level and the occurrence of PI among SCI patients.

Methods: We conducted a retrospective analysis of 576 SCI patients admitted to the Rehabilitation Medicine Department between January 1, 2017, and December 31, 2021. Following exclusions, 491 patients were included in the final analysis, with 139 PI cases identified.

Results: Surgery, level of injury and chest comorbidities were covariates in the relationship between fibrinogen level and PI incidence. Other identified potential risk factors for PI included age, D-dimer level, urinary tract infections (UTI), deep vein thrombosis (DVT), anticoagulant therapy, injury mechanism, and the American Spinal Injury Association Impairment Scale (AIS) grades. After adjusting for these factors, we found that for every 1 g/L increase in fibrinogen level, the risk of developing PI increased by 18% (HR = 1.18, P = 0.011), and indicating a positive linear relationship between fibrinogen level and PI incidence.

Conclusion: Plasma fibrinogen was an independent risk factor for PI in patients with SCI, especially for AIS-B and C grades. Proactive management of fibrinogen level after admission to rehabilitation medicine department could be crucial in reducing the incidence of PI in this vulnerable population.

Clinical trial number: Not applicable.

背景:脊髓损伤(SCI)患者发生肺部感染(PI)的风险较高,而血浆纤维蛋白原水平可能是肺部感染的一个独立风险因素。然而,SCI人群中纤维蛋白原水平与肺部感染发病率之间的关系仍不清楚。本研究旨在阐明 SCI 患者血浆纤维蛋白原水平与 PI 发生率之间的关系:我们对 2017 年 1 月 1 日至 2021 年 12 月 31 日期间康复医学科收治的 576 名 SCI 患者进行了回顾性分析。经过排除,491 名患者被纳入最终分析,其中发现 139 例 PI:手术、损伤程度和胸部合并症是影响纤维蛋白原水平与PI发生率之间关系的协变量。其他已确定的 PI 潜在风险因素包括年龄、D-二聚体水平、尿路感染 (UTI)、深静脉血栓形成 (DVT)、抗凝治疗、损伤机制和美国脊柱损伤协会损伤量表 (AIS) 等级。在对这些因素进行调整后,我们发现纤维蛋白原水平每增加 1 克/升,发生 PI 的风险就会增加 18%(HR = 1.18,P = 0.011),这表明纤维蛋白原水平与 PI 发生率之间存在正线性关系:结论:血浆纤维蛋白原是SCI患者发生PI的独立危险因素,尤其是AIS-B和C级患者。在康复医学科入院后,积极控制纤维蛋白原水平对于降低这一弱势群体的PI发生率至关重要:临床试验编号:不适用。
{"title":"Plasma fibrinogen level is independent risk factor associated with the incidence of pulmonary infection in patients with spinal cord injury: a retrospective cohort study.","authors":"Jinlong Zhang, Cheng Wang, Chengqi He","doi":"10.1186/s12890-024-03332-y","DOIUrl":"https://doi.org/10.1186/s12890-024-03332-y","url":null,"abstract":"<p><strong>Background: </strong>Patients with spinal cord injury (SCI) are at higher risk of developing pulmonary infection (PI), and plasma fibrinogen level may be an independent risk factor for PI. However, the relationship between fibrinogen level and PI incidence in the SCI population remains unclear. This study aimed to elucidate the association between plasma fibrinogen level and the occurrence of PI among SCI patients.</p><p><strong>Methods: </strong>We conducted a retrospective analysis of 576 SCI patients admitted to the Rehabilitation Medicine Department between January 1, 2017, and December 31, 2021. Following exclusions, 491 patients were included in the final analysis, with 139 PI cases identified.</p><p><strong>Results: </strong>Surgery, level of injury and chest comorbidities were covariates in the relationship between fibrinogen level and PI incidence. Other identified potential risk factors for PI included age, D-dimer level, urinary tract infections (UTI), deep vein thrombosis (DVT), anticoagulant therapy, injury mechanism, and the American Spinal Injury Association Impairment Scale (AIS) grades. After adjusting for these factors, we found that for every 1 g/L increase in fibrinogen level, the risk of developing PI increased by 18% (HR = 1.18, P = 0.011), and indicating a positive linear relationship between fibrinogen level and PI incidence.</p><p><strong>Conclusion: </strong>Plasma fibrinogen was an independent risk factor for PI in patients with SCI, especially for AIS-B and C grades. Proactive management of fibrinogen level after admission to rehabilitation medicine department could be crucial in reducing the incidence of PI in this vulnerable population.</p><p><strong>Clinical trial number: </strong>Not applicable.</p>","PeriodicalId":9148,"journal":{"name":"BMC Pulmonary Medicine","volume":"24 1","pages":"520"},"PeriodicalIF":2.6,"publicationDate":"2024-10-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11487796/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142457968","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Silicosis predicts drug resistance and retreatment among tuberculosis patients in India: a secondary data analysis from Khambhat, Gujarat (2006-2022). 矽肺病可预测印度结核病患者的耐药性和再治疗情况:对古吉拉特邦坎巴特(Khambhat)的二手数据分析(2006-2022 年)。
IF 2.6 3区 医学 Q2 RESPIRATORY SYSTEM Pub Date : 2024-10-18 DOI: 10.1186/s12890-024-03338-6
Mihir P Rupani

Background: India, with the highest global burden of tuberculosis (TB) and drug-resistant TB, aims to eliminate TB by 2025. Yet, limited evidence exists on drug resistance patterns and retreatment among patients with silico-tuberculosis. This study explores these patterns and assesses the impact of silicosis on TB retreatment in India.

Methods: This secondary data analysis stems from a larger retrospective cohort study conducted in Khambhat, Gujarat, between January 2006 and February 2022. It included 138 patients with silico-tuberculosis and 2,610 TB patients without silicosis. Data from the Nikshay TB information portal were linked with silicosis diagnosis reports from the Pneumoconiosis Board using the unique Nikshay ID as the linking variable. Drug-resistant TB was defined as resistance to any anti-TB drug recorded in Nikshay. Retreatment refers to TB patients who have previously undergone anti-TB treatment for one month or more and need further treatment. Recurrent TB denotes patients who were previously declared cured or had completed treatment but later tested positive for microbiologically confirmed TB. Multivariable logistic regression was used to determine the impact of co-prevalent silicosis on drug resistance and retreatment.

Results: Patients with silico-tuberculosis showed a higher proportion of retreatment compared to those without silicosis (55% vs. 23%, p < 0.001). Notably, 28% of patients with silico-tuberculosis were recurrent TB cases, compared to 11% among those without silicosis. Regarding drug resistance, the silico-tuberculosis group exhibited a higher rate (6% vs. 3%), largely due to rifampicin resistance (5% vs. 2%, p = 0.022). Co-prevalent silicosis was associated with a 2.5 times greater risk of drug-resistant TB (adjusted OR 2.5, 95% CI, 1.1-5.3; p = 0.021). Additionally, patients with silico-tuberculosis had a fourfold increased risk of retreatment for TB (adjusted OR 4, 95% CI, 3-6; p < 0.001).

Conclusions: Co-prevalent silicosis significantly elevates the risk of drug resistance, recurrence, and retreatment among TB patients in India. This study indicates a need for improved treatment protocols and suggests that future research should focus on randomized controlled trials to evaluate appropriate anti-TB regimen and duration of therapy for this high-risk group. Given India's goal to eliminate TB by 2025, addressing the challenges posed by silico-tuberculosis is critical.

背景:印度是全球结核病和耐药性结核病负担最重的国家,其目标是到 2025 年消除结核病。然而,关于矽肺患者的耐药模式和再治疗的证据却很有限。本研究探讨了这些模式,并评估了矽肺对印度结核病再治疗的影响:这项二手数据分析源于 2006 年 1 月至 2022 年 2 月期间在古吉拉特邦 Khambhat 进行的一项大型回顾性队列研究。研究对象包括 138 名矽肺病人和 2610 名非矽肺病人。使用唯一的 Nikshay ID 作为连接变量,将 Nikshay 结核病信息门户网站的数据与尘肺病委员会的矽肺诊断报告连接起来。耐药结核病的定义是对 Nikshay 中记录的任何抗结核药物产生耐药性。再治疗是指曾接受一个月或以上抗结核治疗并需要进一步治疗的结核病患者。复发肺结核指之前已被宣布治愈或已完成治疗,但后来经微生物学确证肺结核检测呈阳性的患者。采用多变量逻辑回归法来确定共患矽肺对耐药性和再治疗的影响:结果:与无矽肺病患者相比,有矽肺病的患者接受再治疗的比例更高(55% 对 23%,P 结论:有矽肺病的患者接受再治疗的比例更高,P在印度,同时患有矽肺病的肺结核患者耐药、复发和再治疗的风险大大增加。这项研究表明,有必要改进治疗方案,并建议未来的研究应侧重于随机对照试验,以评估针对这一高风险群体的适当抗结核治疗方案和疗程。鉴于印度的目标是到 2025 年消除结核病,因此应对硅结核病带来的挑战至关重要。
{"title":"Silicosis predicts drug resistance and retreatment among tuberculosis patients in India: a secondary data analysis from Khambhat, Gujarat (2006-2022).","authors":"Mihir P Rupani","doi":"10.1186/s12890-024-03338-6","DOIUrl":"https://doi.org/10.1186/s12890-024-03338-6","url":null,"abstract":"<p><strong>Background: </strong>India, with the highest global burden of tuberculosis (TB) and drug-resistant TB, aims to eliminate TB by 2025. Yet, limited evidence exists on drug resistance patterns and retreatment among patients with silico-tuberculosis. This study explores these patterns and assesses the impact of silicosis on TB retreatment in India.</p><p><strong>Methods: </strong>This secondary data analysis stems from a larger retrospective cohort study conducted in Khambhat, Gujarat, between January 2006 and February 2022. It included 138 patients with silico-tuberculosis and 2,610 TB patients without silicosis. Data from the Nikshay TB information portal were linked with silicosis diagnosis reports from the Pneumoconiosis Board using the unique Nikshay ID as the linking variable. Drug-resistant TB was defined as resistance to any anti-TB drug recorded in Nikshay. Retreatment refers to TB patients who have previously undergone anti-TB treatment for one month or more and need further treatment. Recurrent TB denotes patients who were previously declared cured or had completed treatment but later tested positive for microbiologically confirmed TB. Multivariable logistic regression was used to determine the impact of co-prevalent silicosis on drug resistance and retreatment.</p><p><strong>Results: </strong>Patients with silico-tuberculosis showed a higher proportion of retreatment compared to those without silicosis (55% vs. 23%, p < 0.001). Notably, 28% of patients with silico-tuberculosis were recurrent TB cases, compared to 11% among those without silicosis. Regarding drug resistance, the silico-tuberculosis group exhibited a higher rate (6% vs. 3%), largely due to rifampicin resistance (5% vs. 2%, p = 0.022). Co-prevalent silicosis was associated with a 2.5 times greater risk of drug-resistant TB (adjusted OR 2.5, 95% CI, 1.1-5.3; p = 0.021). Additionally, patients with silico-tuberculosis had a fourfold increased risk of retreatment for TB (adjusted OR 4, 95% CI, 3-6; p < 0.001).</p><p><strong>Conclusions: </strong>Co-prevalent silicosis significantly elevates the risk of drug resistance, recurrence, and retreatment among TB patients in India. This study indicates a need for improved treatment protocols and suggests that future research should focus on randomized controlled trials to evaluate appropriate anti-TB regimen and duration of therapy for this high-risk group. Given India's goal to eliminate TB by 2025, addressing the challenges posed by silico-tuberculosis is critical.</p>","PeriodicalId":9148,"journal":{"name":"BMC Pulmonary Medicine","volume":"24 1","pages":"522"},"PeriodicalIF":2.6,"publicationDate":"2024-10-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11490045/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142457970","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Risk factors for Pseudomonas aeruginosa isolation in chronic obstructive pulmonary disease: a systematic review and meta-analysis. 慢性阻塞性肺病铜绿假单胞菌分离的风险因素:系统回顾和荟萃分析。
IF 2.6 3区 医学 Q2 RESPIRATORY SYSTEM Pub Date : 2024-10-18 DOI: 10.1186/s12890-024-03309-x
Yuyu Zhang, Nini Zhang, Tingting Li, Lanrui Jing, Yu Wang, Wei Ge

Background: Pseudomonas aeruginosa (PA) isolation in patients with chronic obstructive pulmonary disease (COPD) has been associated with a poor prognosis. This meta-analysis aimed to determine significant risk factors for PA isolation among patients with COPD.

Methods: A systematic literature retrieval from PubMed, Embase, Web of Science and China National Knowledge Infrastructure (CNKI) was conducted, including studies from January 2003 to September 2024. Case-control and cohort studies exploring the risk factors for PA isolation in patients with COPD were included in this analysis. A random-effects model was applied to estimate the pooled adjusted odds ratio (paOR) or hazard ratio (paHR) with the corresponding 95% confidence intervals (CI).

Results: Thirteen eligible studies with a total of 25,802 participants were included in this meta-analysis. Prior systemic steroid therapy (paOR: 2.67; 95% CI: 1.29-5.53; P = 0.008), previous antibiotic treatment (paOR: 2.83; 95% CI: 1.14-6.97; P = 0.02), high "Body mass index, airflow Obstruction, Dyspnea, Exercise capacity" (BODE) index (paOR: 4.13; 95% CI: 1.67-10.23; P = 0.002), 6-min walking distance (6MWD) < 250 m (paOR: 4.27; 95% CI: 2.59-7.01; P < 0.001), COPD assessment test (CAT) score > 20 points (paOR: 2.49; 95% CI: 1.46-4.23; P = 0.001), hypoproteinemia (paOR: 2.62; 95%CI: 1.32-5.19; P = 0.006), hospitalizations in the previous year (paOR: 3.74; 95%CI: 1.22-11.49; P = 0.021), Bronchiectasis (paOR = 4.81; 95% CI: 3.66-6.33; P < 0.001) and prior PA isolation (paOR: 16.39; 95% CI: 7.65-35.10; P < 0.001) were associated with PA isolation in patients with COPD.

Conclusions: Our study identified nine risk factors associated with an increased risk of PA isolation in COPD patients. These findings are significant for the early identification of patients at risk for PA isolation, which might contribute to reducing mortality and improving clinical outcomes.

背景:慢性阻塞性肺疾病(COPD)患者铜绿假单胞菌(PA)分离与不良预后有关。这项荟萃分析旨在确定慢性阻塞性肺病患者中铜绿假单胞菌分离的重要风险因素:从 PubMed、Embase、Web of Science 和中国国家知识基础设施(CNKI)中进行了系统的文献检索,包括 2003 年 1 月至 2024 年 9 月期间的研究。本次分析纳入了探讨慢性阻塞性肺病患者PA隔离风险因素的病例对照和队列研究。采用随机效应模型来估算汇总调整后的几率比(paOR)或危险比(paHR)以及相应的95%置信区间(CI):本次荟萃分析共纳入了 13 项符合条件的研究,共有 25802 名参与者。曾接受全身类固醇治疗(paOR:2.67;95% CI:1.29-5.53;P = 0.008)、曾接受抗生素治疗(paOR:2.83;95% CI:1.14-6.97;P = 0.02)、"体重指数、气流阻塞、呼吸困难、运动能力"(BODE)指数高(paOR:4.13;95% CI:1.67-10.23;P = 0.002)、6 分钟步行距离(6MWD)20 分(paOR:2.49;95% CI:1.46-4.23;P = 0.001)、低蛋白血症(paOR:2.62;95%CI:1.32-5.19;P = 0.006)、前一年住院(paOR:3.74;95%CI:1.22-11.49;P = 0.021)、支气管扩张(paOR = 4.81;95% CI:3.66-6.33;P 结论:我们的研究发现了九个与支气管扩张相关的风险因素,它们分别是:(1)支气管扩张;(2)支气管扩张;(3)支气管扩张;(4)支气管扩张;(5)支气管扩张;(6)支气管扩张;(7)支气管扩张;(8)支气管扩张;(9)支气管扩张:我们的研究发现了与慢性阻塞性肺病患者 PA 隔离风险增加相关的九个风险因素。这些发现对早期识别有 PA 隔离风险的患者意义重大,可能有助于降低死亡率和改善临床预后。
{"title":"Risk factors for Pseudomonas aeruginosa isolation in chronic obstructive pulmonary disease: a systematic review and meta-analysis.","authors":"Yuyu Zhang, Nini Zhang, Tingting Li, Lanrui Jing, Yu Wang, Wei Ge","doi":"10.1186/s12890-024-03309-x","DOIUrl":"10.1186/s12890-024-03309-x","url":null,"abstract":"<p><strong>Background: </strong>Pseudomonas aeruginosa (PA) isolation in patients with chronic obstructive pulmonary disease (COPD) has been associated with a poor prognosis. This meta-analysis aimed to determine significant risk factors for PA isolation among patients with COPD.</p><p><strong>Methods: </strong>A systematic literature retrieval from PubMed, Embase, Web of Science and China National Knowledge Infrastructure (CNKI) was conducted, including studies from January 2003 to September 2024. Case-control and cohort studies exploring the risk factors for PA isolation in patients with COPD were included in this analysis. A random-effects model was applied to estimate the pooled adjusted odds ratio (paOR) or hazard ratio (paHR) with the corresponding 95% confidence intervals (CI).</p><p><strong>Results: </strong>Thirteen eligible studies with a total of 25,802 participants were included in this meta-analysis. Prior systemic steroid therapy (paOR: 2.67; 95% CI: 1.29-5.53; P = 0.008), previous antibiotic treatment (paOR: 2.83; 95% CI: 1.14-6.97; P = 0.02), high \"Body mass index, airflow Obstruction, Dyspnea, Exercise capacity\" (BODE) index (paOR: 4.13; 95% CI: 1.67-10.23; P = 0.002), 6-min walking distance (6MWD) < 250 m (paOR: 4.27; 95% CI: 2.59-7.01; P < 0.001), COPD assessment test (CAT) score > 20 points (paOR: 2.49; 95% CI: 1.46-4.23; P = 0.001), hypoproteinemia (paOR: 2.62; 95%CI: 1.32-5.19; P = 0.006), hospitalizations in the previous year (paOR: 3.74; 95%CI: 1.22-11.49; P = 0.021), Bronchiectasis (paOR = 4.81; 95% CI: 3.66-6.33; P < 0.001) and prior PA isolation (paOR: 16.39; 95% CI: 7.65-35.10; P < 0.001) were associated with PA isolation in patients with COPD.</p><p><strong>Conclusions: </strong>Our study identified nine risk factors associated with an increased risk of PA isolation in COPD patients. These findings are significant for the early identification of patients at risk for PA isolation, which might contribute to reducing mortality and improving clinical outcomes.</p>","PeriodicalId":9148,"journal":{"name":"BMC Pulmonary Medicine","volume":"24 1","pages":"521"},"PeriodicalIF":2.6,"publicationDate":"2024-10-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11487921/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142457969","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Number of involved nodal stations predicts survival in small cell lung cancer. 受累结节的数量可预测小细胞肺癌患者的生存期。
IF 2.6 3区 医学 Q2 RESPIRATORY SYSTEM Pub Date : 2024-10-17 DOI: 10.1186/s12890-024-03313-1
Han Zhang, Cong Jiang, Dongliang Bian, Jing Zhang, Yuming Zhu, Jie Dai, Gening Jiang

Background: In small cell lung cancer (SCLC), the pathological N category is identical to it in non-small cell lung cancer (NSCLC) and remains unchanged over a decade. Here we verified the discriminability of number of involved nodal stations (nS) in SCLC and compared its efficacy in predicting survival with currently used pathological nodal (pN) staging.

Methods: We retrospectively analyzed the patients who received operations and were pathologically diagnosed as SCLC at Shanghai Pulmonary Hospital between 2009 and 2019. X-tile software was adopted to determine optimal cut-off values for nS groups. Kaplan-Meier method and Cox regression analysis were used to compare survival between different groups. Decision curve analysis (DCA) was employed to evaluate the standardized net benefit.

Results: A total of 369 patients were included. The median number of sampled stations was 6 (range 3-11), and the median number of positive stations was 1 (range 0-7). The optimal cutoff for nS groups was: nS0 (no station involved), nS1-2 (one or two stations involved), and nS ≥ 3 (three or more stations involved). Overall survival (OS) and relapse-free survival (RFS) were statistically different among all adjacent categories within the nS classification (p < 0.001, for both OS and RFS between each two subgroups), but survival curves for subgroups in pN overlapped (OS, p = 0.067; RFS, p = 0.068, pN2 vs. pN1). After adjusting for other confounders, nS was a prognostic indicator for OS and RFS. The DCA revealed that nS had improved predictive capability than pN.

Conclusions: Our cohort study demonstrated that the nS might serve as a superior indicator to predict survival than pN in SCLC and was worth considering in the future definition of the N category.

背景:在小细胞肺癌(SCLC)中,病理N分期与非小细胞肺癌(NSCLC)的N分期相同,且十多年来一直未变。在此,我们验证了受累结节站数(nS)在小细胞肺癌中的可鉴别性,并将其在预测生存率方面的功效与目前使用的病理结节(pN)分期进行了比较:我们回顾性分析了2009年至2019年期间在上海市肺科医院接受手术并经病理诊断为SCLC的患者。采用X-tile软件确定nS组的最佳临界值。采用 Kaplan-Meier 法和 Cox 回归分析比较不同组间的生存率。采用决策曲线分析法(DCA)评估标准化净获益:结果:共纳入 369 名患者。取样站的中位数为 6 个(范围 3-11),阳性站的中位数为 1 个(范围 0-7)。nS 组的最佳分界线为:nS0(未涉及任何站点)、nS1-2(涉及一个或两个站点)和 nS≥3 (涉及三个或更多站点)。总生存期(OS)和无复发生存期(RFS)在 nS 分类中的所有相邻类别中均存在统计学差异(P 结论:我们的队列研究表明,nS 0 和 nS ≥ 3 是导致癌症复发的主要因素:我们的队列研究表明,在预测 SCLC 患者的生存率方面,nS 可能是比 pN 更优越的指标,值得在今后定义 N 类别时加以考虑。
{"title":"Number of involved nodal stations predicts survival in small cell lung cancer.","authors":"Han Zhang, Cong Jiang, Dongliang Bian, Jing Zhang, Yuming Zhu, Jie Dai, Gening Jiang","doi":"10.1186/s12890-024-03313-1","DOIUrl":"https://doi.org/10.1186/s12890-024-03313-1","url":null,"abstract":"<p><strong>Background: </strong>In small cell lung cancer (SCLC), the pathological N category is identical to it in non-small cell lung cancer (NSCLC) and remains unchanged over a decade. Here we verified the discriminability of number of involved nodal stations (nS) in SCLC and compared its efficacy in predicting survival with currently used pathological nodal (pN) staging.</p><p><strong>Methods: </strong>We retrospectively analyzed the patients who received operations and were pathologically diagnosed as SCLC at Shanghai Pulmonary Hospital between 2009 and 2019. X-tile software was adopted to determine optimal cut-off values for nS groups. Kaplan-Meier method and Cox regression analysis were used to compare survival between different groups. Decision curve analysis (DCA) was employed to evaluate the standardized net benefit.</p><p><strong>Results: </strong>A total of 369 patients were included. The median number of sampled stations was 6 (range 3-11), and the median number of positive stations was 1 (range 0-7). The optimal cutoff for nS groups was: nS0 (no station involved), nS1-2 (one or two stations involved), and nS ≥ 3 (three or more stations involved). Overall survival (OS) and relapse-free survival (RFS) were statistically different among all adjacent categories within the nS classification (p < 0.001, for both OS and RFS between each two subgroups), but survival curves for subgroups in pN overlapped (OS, p = 0.067; RFS, p = 0.068, pN2 vs. pN1). After adjusting for other confounders, nS was a prognostic indicator for OS and RFS. The DCA revealed that nS had improved predictive capability than pN.</p><p><strong>Conclusions: </strong>Our cohort study demonstrated that the nS might serve as a superior indicator to predict survival than pN in SCLC and was worth considering in the future definition of the N category.</p>","PeriodicalId":9148,"journal":{"name":"BMC Pulmonary Medicine","volume":"24 1","pages":"519"},"PeriodicalIF":2.6,"publicationDate":"2024-10-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11487922/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142457958","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Optimal first-line treatment for EGFR-mutated NSCLC: a comparative analysis of osimertinib and second-generation EGFR-TKIs. 表皮生长因子受体突变 NSCLC 的最佳一线治疗:奥西替尼与第二代表皮生长因子受体-TKIs 的比较分析。
IF 2.6 3区 医学 Q2 RESPIRATORY SYSTEM Pub Date : 2024-10-16 DOI: 10.1186/s12890-024-03336-8
Hsu-Yuan Chen, Chia-Hung Chen, Wei-Chih Liao, Yu-Chao Lin, Hung-Jen Chen, Te-Chun Hsia, Wen-Chien Cheng, Chih-Yen Tu

Background: Osimertinib is an irreversible third-generation epidermal growth factor receptor (EGFR) tyrosine kinase inhibitor (TKI). It is the preferred first-line treatment for EGFR-mutated non-small cell lung cancer (NSCLC) compared to first-generation EGFR-TKIs. However, limited research has compared its clinical effectiveness with second-generation (2nd G) EGFR-TKIs.

Materials and methods: This study recruited patients diagnosed with stage IIIb-IV EGFR-mutated NSCLC who received first-line treatment with either 2nd G EGFR-TKIs (afatinib and dacomitinib) or osimertinib between April 2020 and April 2023.

Results: The final analysis included 168 patients, of whom 113 received 2nd G EGFR-TKIs (afatinib or dacomitinib) and 55 received osimertinib. The median progression-free survival (PFS) did not differ significantly between 2nd G EGFR-TKIs and osimertinib (del 19: 17.6 months; L858R: 20.0 months vs. 28.3 months, p = 0.081). In patients with the EGFR exon 19 deletion, osimertinib conferred a longer median PFS (28.3 vs. 17.6 months, p = 0.118) and time to treatment failure (30.2 vs. 22.7 months, p = 0.722) than 2nd G EGFR-TKIs. However, the differences were not statistically significant. In patients with with the EGFR exon 19 deletion and central nervous system metastasis, the median PFS did not differ significantly between those treated with osimertinib (14.3 months) and those treated with 2nd G EGFR-TKIs (17.6 months; p = 0.881). Multivariate regression analysis revealed that the NSCLC stage was the only independent negative predictor of PFS. The treatment patterns in the second line also differed significantly between groups (p = 0.008).

Conclusions: This study found comparable effectiveness between osimertinib and 2nd G EGFR-TKIs as first-line treatment for advanced EGFR-mutated NSCLC, with only the NSCLC stage identified as a negative predictor of PFS. However, whether the different second-line treatments affect overall survival should be examined.

背景奥希替尼是一种不可逆的第三代表皮生长因子受体(EGFR)酪氨酸激酶抑制剂(TKI)。与第一代表皮生长因子受体酪氨酸激酶抑制剂相比,它是表皮生长因子受体突变非小细胞肺癌(NSCLC)的首选一线治疗药物。然而,将其与第二代(2nd G)EGFR-TKIs的临床疗效进行比较的研究还很有限:本研究招募了被诊断为IIIb-IV期EGFR突变NSCLC患者,这些患者在2020年4月至2023年4月期间接受了第二代G EGFR-TKIs(阿法替尼和达科米替尼)或奥西莫替尼的一线治疗:最终分析包括168名患者,其中113人接受了第2代G类EGFR-TKIs(阿法替尼或达科米替尼)治疗,55人接受了奥希替尼治疗。第2代EGFR-TKIs和奥希替尼的中位无进展生存期(PFS)没有显著差异(del 19:17.6个月;L858R:20.0个月 vs. 28.3个月,p = 0.081)。在表皮生长因子受体外显子19缺失患者中,奥希替尼的中位生存期(28.3个月 vs. 17.6个月,p = 0.118)和治疗失败时间(30.2个月 vs. 22.7个月,p = 0.722)均长于第2种G类表皮生长因子受体-TKIs。然而,这些差异在统计学上并不显著。在表皮生长因子受体外显子19缺失和中枢神经系统转移的患者中,接受奥希替尼治疗的患者(14.3个月)和接受第2代G型表皮生长因子受体-TKIs治疗的患者(17.6个月;p = 0.881)的中位PFS没有显著差异。多变量回归分析显示,NSCLC分期是PFS的唯一独立负预测因子。二线治疗模式在组间也有显著差异(P = 0.008):本研究发现,奥希替尼和二线G EGFR-TKIs作为晚期EGFR突变NSCLC的一线治疗,疗效相当,只有NSCLC分期被认为是PFS的负向预测因素。然而,不同的二线治疗是否会影响总生存期还需要进一步研究。
{"title":"Optimal first-line treatment for EGFR-mutated NSCLC: a comparative analysis of osimertinib and second-generation EGFR-TKIs.","authors":"Hsu-Yuan Chen, Chia-Hung Chen, Wei-Chih Liao, Yu-Chao Lin, Hung-Jen Chen, Te-Chun Hsia, Wen-Chien Cheng, Chih-Yen Tu","doi":"10.1186/s12890-024-03336-8","DOIUrl":"https://doi.org/10.1186/s12890-024-03336-8","url":null,"abstract":"<p><strong>Background: </strong>Osimertinib is an irreversible third-generation epidermal growth factor receptor (EGFR) tyrosine kinase inhibitor (TKI). It is the preferred first-line treatment for EGFR-mutated non-small cell lung cancer (NSCLC) compared to first-generation EGFR-TKIs. However, limited research has compared its clinical effectiveness with second-generation (2<sup>nd</sup> G) EGFR-TKIs.</p><p><strong>Materials and methods: </strong>This study recruited patients diagnosed with stage IIIb-IV EGFR-mutated NSCLC who received first-line treatment with either 2<sup>nd</sup> G EGFR-TKIs (afatinib and dacomitinib) or osimertinib between April 2020 and April 2023.</p><p><strong>Results: </strong>The final analysis included 168 patients, of whom 113 received 2<sup>nd</sup> G EGFR-TKIs (afatinib or dacomitinib) and 55 received osimertinib. The median progression-free survival (PFS) did not differ significantly between 2<sup>nd</sup> G EGFR-TKIs and osimertinib (del 19: 17.6 months; L858R: 20.0 months vs. 28.3 months, p = 0.081). In patients with the EGFR exon 19 deletion, osimertinib conferred a longer median PFS (28.3 vs. 17.6 months, p = 0.118) and time to treatment failure (30.2 vs. 22.7 months, p = 0.722) than 2<sup>nd</sup> G EGFR-TKIs. However, the differences were not statistically significant. In patients with with the EGFR exon 19 deletion and central nervous system metastasis, the median PFS did not differ significantly between those treated with osimertinib (14.3 months) and those treated with 2nd G EGFR-TKIs (17.6 months; p = 0.881). Multivariate regression analysis revealed that the NSCLC stage was the only independent negative predictor of PFS. The treatment patterns in the second line also differed significantly between groups (p = 0.008).</p><p><strong>Conclusions: </strong>This study found comparable effectiveness between osimertinib and 2<sup>nd</sup> G EGFR-TKIs as first-line treatment for advanced EGFR-mutated NSCLC, with only the NSCLC stage identified as a negative predictor of PFS. However, whether the different second-line treatments affect overall survival should be examined.</p>","PeriodicalId":9148,"journal":{"name":"BMC Pulmonary Medicine","volume":"24 1","pages":"517"},"PeriodicalIF":2.6,"publicationDate":"2024-10-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11481380/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142457967","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Correction: A comparative analysis of lung function and spirometry parameters in genotype-controlled natives living at low and high altitude. 更正:对生活在低海拔和高海拔地区的基因型受控土著人的肺功能和肺活量参数进行比较分析。
IF 2.6 3区 医学 Q2 RESPIRATORY SYSTEM Pub Date : 2024-10-16 DOI: 10.1186/s12890-024-03282-5
Esteban Ortiz-Prado, Sebastián Encalada, Johanna Mosquera, Katherine Simbaña-Rivera, Lenin Gomez-Barreno, Diego Duta, Israel Ochoa, Juan S Izquierdo-Condoy, Eduardo Vasconez, German Burgos, Manuel Calvopiña, Ginés Viscor
{"title":"Correction: A comparative analysis of lung function and spirometry parameters in genotype-controlled natives living at low and high altitude.","authors":"Esteban Ortiz-Prado, Sebastián Encalada, Johanna Mosquera, Katherine Simbaña-Rivera, Lenin Gomez-Barreno, Diego Duta, Israel Ochoa, Juan S Izquierdo-Condoy, Eduardo Vasconez, German Burgos, Manuel Calvopiña, Ginés Viscor","doi":"10.1186/s12890-024-03282-5","DOIUrl":"https://doi.org/10.1186/s12890-024-03282-5","url":null,"abstract":"","PeriodicalId":9148,"journal":{"name":"BMC Pulmonary Medicine","volume":"24 1","pages":"518"},"PeriodicalIF":2.6,"publicationDate":"2024-10-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11481591/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142457953","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The severity assessment and nucleic acid turning-negative-time prediction in COVID-19 patients with COPD using a fused deep learning model. 利用融合深度学习模型对 COVID-19 慢性阻塞性肺病患者进行严重程度评估和核酸转阴时间预测。
IF 2.6 3区 医学 Q2 RESPIRATORY SYSTEM Pub Date : 2024-10-14 DOI: 10.1186/s12890-024-03333-x
Yanhui Liu, Wenxiu Zhang, Mengzhou Sun, Xiaoyun Liang, Lu Wang, Jiaqi Zhao, Yongquan Hou, Haina Li, Xiaoguang Yang

Background: Previous studies have shown that patients with pre-existing chronic obstructive pulmonary diseases (COPD) were more likely to be infected with coronavirus disease (COVID-19) and lead to more severe lung lesions. However, few studies have explored the severity and prognosis of COVID-19 patients with different phenotypes of COPD.

Purpose: The aim of this study is to investigate the value of the deep learning and radiomics features for the severity evaluation and the nucleic acid turning-negative time prediction in COVID-19 patients with COPD including two phenotypes of chronic bronchitis predominant patients and emphysema predominant patients.

Methods: A total of 281 patients were retrospectively collected from Hohhot First Hospital between October 2022 and January 2023. They were divided to three groups: COVID-19 group of 95 patients, COVID-19 with emphysema group of 94 patients, COVID-19 with chronic bronchitis group of 92 patients. All patients underwent chest computed tomography (CT) scans and recorded clinical data. The U-net model was pretrained to segment the pulmonary involvement area on CT images and the severity of pneumonia were evaluated by the percentage of pulmonary involvement volume to lung volume. The 107 radiomics features were extracted by pyradiomics package. The Spearman method was employed to analyze the correlation of the data and visualize it through a heatmap. Then we establish a deep learning model (model 1) and a fusion model (model 2) combined deep learning with radiomics features to predict nucleic acid turning-negative time.

Results: COVID-19 patients with emphysema was lowest in the lymphocyte count compared to COVID-19 patients and COVID-19 companied with chronic bronchitis, and they have the most extensive range of pulmonary inflammation. The lymphocyte count was significantly correlated with pulmonary involvement and the time for nucleic acid turning negative (r=-0.145, P < 0.05). Importantly, our results demonstrated that model 2 achieved an accuracy of 80.9% in predicting nucleic acid turning-negative time.

Conclusion: The pre-existing emphysema phenotype of COPD severely aggravated the pulmonary involvement of COVID-19 patients. Deep learning and radiomics features may provide more information to accurately predict the nucleic acid turning-negative time, which is expected to play an important role in clinical practice.

背景:以往的研究表明,原有慢性阻塞性肺疾病(COPD)的患者更容易感染冠状病毒病(COVID-19)并导致更严重的肺部病变。目的:本研究旨在探讨深度学习和放射组学特征对COVID-19慢性阻塞性肺疾病患者的严重程度评估和核酸转阴时间预测的价值,包括慢性支气管炎为主和肺气肿为主两种表型:方法:回顾性收集2022年10月至2023年1月期间呼和浩特市第一医院收治的281例COVID-19患者。他们被分为三组:COVID-19组95人,COVID-19伴肺气肿组94人,COVID-19伴慢性支气管炎组92人。所有患者均接受了胸部计算机断层扫描(CT)并记录了临床数据。对 U-net 模型进行预训练,以分割 CT 图像上的肺部受累区域,并通过肺部受累体积占肺体积的百分比来评估肺炎的严重程度。通过 pyradiomics 软件包提取了 107 个放射组学特征。采用斯皮尔曼方法分析数据的相关性,并通过热图将其可视化。然后建立深度学习模型(模型1)和深度学习与放射组学特征相结合的融合模型(模型2)来预测核酸转阴时间:COVID-19肺气肿患者的淋巴细胞数与COVID-19患者和COVID-19慢性支气管炎患者相比最低,且肺部炎症范围最广。淋巴细胞计数与肺部受累程度和核酸转阴时间有明显相关性(r=-0.145,P 结论:淋巴细胞计数与肺部受累程度和核酸转阴时间有明显相关性(r=-0.145,P 结论):COPD 原有的肺气肿表型严重加重了 COVID-19 患者的肺部受累。深度学习和放射组学特征可为准确预测核酸转阴时间提供更多信息,有望在临床实践中发挥重要作用。
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引用次数: 0
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BMC Pulmonary Medicine
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