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Deciphering the role of SAMHD1 in endometrial cancer progression. 破解 SAMHD1 在子宫内膜癌进展中的作用。
IF 5.7 2区 生物学 Q1 BIOLOGY Pub Date : 2024-10-11 DOI: 10.1186/s13062-024-00525-7
Ping Qiang, Ying Chen, Yang Shao, Qicheng Deng, Songyuan Xu, Weipei Zhu

Background: Endometrial cancer (EC) presents significant clinical challenges due to its heterogeneity and complex pathophysiology. SAMHD1, known for its role as a deoxynucleotide triphosphate triphosphohydrolase, has been implicated in the progression of various cancers, including EC. This study focuses on elucidating the role of SAMHD1 in EC through its impact on TRIM27-mediated PTEN ubiquitination.

Results: Utilizing a combination of bioinformatics and cellular biology techniques, we investigated the interactions among SAMHD1, TRIM27, and PTEN. Our findings reveal that SAMHD1 modulates PTEN ubiquitination via TRIM27, impacting key pathways involved in EC pathogenesis. These interactions suggest a critical mechanism by which SAMHD1 could influence tumor behavior and progression in EC.

Conclusions: The results from this study underscore the potential of targeting the SAMHD1-TRIM27-PTEN axis as a therapeutic strategy in EC. By providing new insights into the molecular mechanisms underlying EC progression, our research supports the development of novel therapeutic approaches that could contribute to improve treatment strategies for patients with EC.

背景:子宫内膜癌(EC)因其异质性和复杂的病理生理学而给临床带来了巨大挑战。SAMHD1是一种脱氧核苷酸三磷酸三磷酸水解酶,与包括子宫内膜癌在内的多种癌症的进展有关。本研究的重点是通过SAMHD1对TRIM27介导的PTEN泛素化的影响,阐明其在EC中的作用:结果:我们结合生物信息学和细胞生物学技术,研究了SAMHD1、TRIM27和PTEN之间的相互作用。我们的研究结果表明,SAMHD1通过TRIM27调节PTEN的泛素化,从而影响涉及EC发病机制的关键通路。这些相互作用表明,SAMHD1是影响EC肿瘤行为和进展的关键机制:本研究结果强调了靶向 SAMHD1-TRIM27-PTEN 轴作为 EC 治疗策略的潜力。我们的研究为了解EC进展的分子机制提供了新的视角,有助于开发新的治疗方法,从而改善EC患者的治疗策略。
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引用次数: 0
Deciphering MOSPD1's impact on breast cancer progression and therapeutic response. 解密 MOSPD1 对乳腺癌进展和治疗反应的影响。
IF 5.7 2区 生物学 Q1 BIOLOGY Pub Date : 2024-10-05 DOI: 10.1186/s13062-024-00531-9
Yiling Jiang, Hailong Li, Sixuan Wu, Baohong Jiang, Lijun Zeng, Yuanbin Tang, Lunqi Luo, Lianjie Ouyang, Wei Du, Yuehua Li

Background: Motile Sperm Domain-Containing Protein 1 (MOSPD1) has been implicated in breast cancer (BC) pathophysiology, but its exact role remains unclear. This study aimed to assess MOSPD1 expression levels in BC versus normal tissues and investigate its diagnostic potential.

Methods: MOSPD1 expression was analyzed in BC and normal tissues, with Receiver Operating Characteristic analysis for diagnostic evaluation. Validation was performed using immunohistochemistry. Functional studies included tumor growth assays, MOSPD1 suppression and overexpression experiments, and testing BC cell responses to anti-PD-L1 therapy.

Results: MOSPD1 expression was significantly higher in BC samples than normal tissues, correlating with poor clinical outcomes in BC patients. MOSPD1 suppression inhibited tumor growth, while overexpression accelerated it. Silencing MOSPD1 enhanced BC cell sensitivity to anti-PD-L1 therapy and decreased Th2 cell activity. In vivo experiments supported these findings, showing the impact of MOSPD1 on tumor growth and response to therapy.

Conclusions: Elevated MOSPD1 levels in BC suggest its potential as a biomarker for adverse outcomes. Targeting MOSPD1, particularly with anti-PD-L1 therapy, may effectively inhibit BC tumor growth and modulate immune responses. This study emphasizes the significance of MOSPD1 in BC pathophysiology and highlights its promise as a therapeutic target.

背景:含精子结构域的运动蛋白1(MOSPD1)与乳腺癌(BC)的病理生理学有关,但其确切作用仍不清楚。本研究旨在评估MOSPD1在乳腺癌与正常组织中的表达水平,并探讨其诊断潜力:方法:分析 MOSPD1 在 BC 和正常组织中的表达,并利用接收者操作特征分析进行诊断评估。采用免疫组化方法进行验证。功能研究包括肿瘤生长实验、MOSPD1抑制和过表达实验,以及测试BC细胞对抗PD-L1疗法的反应:结果:MOSPD1在BC样本中的表达明显高于正常组织,与BC患者的不良临床预后相关。抑制MOSPD1可抑制肿瘤生长,而过表达则会加速肿瘤生长。沉默MOSPD1可增强BC细胞对抗PD-L1疗法的敏感性,并降低Th2细胞的活性。体内实验支持了这些发现,显示了MOSPD1对肿瘤生长和治疗反应的影响:结论:BC 中 MOSPD1 水平的升高表明它有可能成为不良后果的生物标志物。以MOSPD1为靶点,尤其是使用抗PD-L1疗法,可有效抑制BC肿瘤的生长并调节免疫反应。这项研究强调了MOSPD1在BC病理生理学中的重要性,并突出了其作为治疗靶点的前景。
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引用次数: 0
Shaping root architecture: towards understanding the mechanisms involved in lateral root development. 塑造根系结构:了解侧根发育的相关机制。
IF 5.7 2区 生物学 Q1 BIOLOGY Pub Date : 2024-10-02 DOI: 10.1186/s13062-024-00535-5
Kavya Yalamanchili, Joop E M Vermeer, Ben Scheres, Viola Willemsen

Plants have an amazing ability to adapt to their environment, and this extends beyond biochemical responses and includes developmental changes that help them better exploit resources and survive. The plasticity observed in individual plant morphology is associated with robust developmental pathways that are influenced by environmental factors. However, there is still much to learn about the mechanisms behind the formation of the root system. In Arabidopsis thaliana, the root system displays a hierarchical structure with primary and secondary roots. The process of lateral root (LR) organogenesis involves multiple steps, including LR pre-patterning, LR initiation, LR outgrowth, and LR emergence. The study of root developmental plasticity in Arabidopsis has led to significant progress in understanding the mechanisms governing lateral root formation. The importance of root system architecture lies in its ability to shape the distribution of roots in the soil, which affects the plant's ability to acquire nutrients and water. In Arabidopsis, lateral roots originate from pericycle cells adjacent to the xylem poles known as the xylem-pole-pericycle (XPP). The positioning of LRs along the primary root is underpinned by a repetitive pre-patterning mechanism that establishes primed sites for future lateral root formation. In a subset of primed cells, the memory of a transient priming stimulus leads to the formation of stable pre-branch sites and the establishment of founder cell identity. These founder cells undergo a series of highly organized periclinal and anticlinal cell divisions and expansion to form lateral root primordia. Subsequently, LRP emerges through three overlying cell layers of the primary root, giving rise to fully developed LRs. In addition to LRs Arabidopsis can also develop adventitious lateral roots from the primary root in response to specific stress signals such as wounding or environmental cues. Overall, this review creates an overview of the mechanisms governing root lateral root formation which can be a stepping stone to improved crop yields and a better understanding of plant adaptation to changing environments.

植物具有惊人的适应环境的能力,这种能力不仅包括生化反应,还包括帮助它们更好地利用资源和生存的发育变化。在植物个体形态中观察到的可塑性与受环境因素影响的强大发育途径有关。然而,关于根系形成背后的机制,我们还有很多东西要学习。在拟南芥中,根系显示出主根和次生根的分层结构。侧根(LR)的器官发生过程涉及多个步骤,包括侧根的前期形成、侧根的萌发、侧根的生长和侧根的出现。对拟南芥根系发育可塑性的研究在了解侧根形成机制方面取得了重大进展。根系结构的重要性在于它能够塑造根系在土壤中的分布,从而影响植物获取养分和水分的能力。在拟南芥中,侧根起源于木质部两极附近的周细胞,称为木质部-极-周细胞(XPP)。侧根沿主根的定位是由一种重复性的预规划机制支持的,这种机制为未来侧根的形成建立了初始位置。在一部分前导细胞中,对瞬时前导刺激的记忆导致形成稳定的前分支位点,并建立创始细胞身份。这些始基细胞经过一系列高度有序的周缘和反周缘细胞分裂和扩增,形成侧根原基。随后,LRP 穿过主根的三个上覆细胞层,形成发育完全的侧根。除侧根外,拟南芥还能根据特定的胁迫信号(如伤口或环境线索)从主根上长出不定侧根。总之,本综述概述了根侧根形成的机制,这可以成为提高作物产量和更好地了解植物适应不断变化的环境的垫脚石。
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引用次数: 0
Immune-response gene 1 deficiency aggravates inflammation-triggered cardiac dysfunction by inducing M1 macrophage polarization and aggravating Ly6Chigh monocyte recruitment. 免疫反应基因 1 缺乏症会通过诱导 M1 巨噬细胞极化和加剧 Ly6Chigh 单核细胞募集,加重炎症引发的心脏功能障碍。
IF 5.7 2区 生物学 Q1 BIOLOGY Pub Date : 2024-09-30 DOI: 10.1186/s13062-024-00521-x
Song Shen, Jianhui Li, Zhonghai Wei, Yihai Liu, Lina Kang, Rong Gu, Xuan Sun, Biao Xu, QiaoLing Li

The immune response gene 1 (IRG1) and its metabolite itaconate are implicated in modulating inflammation and oxidative stress, with potential relevance to sepsis-induced myocardial dysfunction (SIMD). This study investigates their roles in SIMD using both in vivo and in vitro models. Mice were subjected to lipopolysaccharide (LPS)-induced sepsis, and cardiac function was assessed in IRG1 knockout (IRG1-/-) and wild-type mice. Exogenous 4-octyl itaconate (4-OI) supplementation was also examined for its protective effects. In vitro, bone marrow-derived macrophages and RAW264.7 cells were treated with 4-OI following Nuclear factor, erythroid 2 like 2 (NRF2)-small interfering RNA administration to elucidate the underlying mechanisms. Our results indicate that IRG1 deficiency exacerbates myocardial injury during sepsis, while 4-OI administration preserves cardiac function and reduces inflammation. Mechanistic insights reveal that 4-OI activates the NRF2/HO-1 pathway, promoting macrophage polarization and attenuating inflammation. These findings underscore the protective role of the IRG1/itaconate axis in SIMD and suggest a therapeutic potential for 4-OI in modulating macrophage responses.

免疫反应基因 1(IRG1)及其代谢产物它肯酸与炎症和氧化应激的调节有关,可能与败血症诱发的心肌功能障碍(SIMD)有关。本研究利用体内和体外模型研究了它们在 SIMD 中的作用。小鼠接受脂多糖(LPS)诱导的败血症治疗,并对IRG1基因敲除(IRG1-/-)和野生型小鼠的心功能进行评估。同时还检测了外源性伊它康酸 4-辛酯(4-OI)的保护作用。在体外,骨髓衍生巨噬细胞和RAW264.7细胞在核因子红细胞2样2(NRF2)-小干扰RNA给药后用4-OI处理,以阐明其潜在机制。我们的研究结果表明,IRG1 缺乏会加重脓毒症期间的心肌损伤,而 4-OI 的施用可保护心脏功能并减轻炎症反应。机理研究发现,4-OI 可激活 NRF2/HO-1 通路,促进巨噬细胞极化并减轻炎症反应。这些发现强调了 IRG1/itaconate 轴在 SIMD 中的保护作用,并表明 4-OI 在调节巨噬细胞反应方面具有治疗潜力。
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引用次数: 0
The role of adipose tissue-derived stromal cells, macrophages and bioscaffolds in cutaneous wound repair. 脂肪组织基质细胞、巨噬细胞和生物支架在皮肤伤口修复中的作用。
IF 5.7 2区 生物学 Q1 BIOLOGY Pub Date : 2024-09-29 DOI: 10.1186/s13062-024-00534-6
S Gandolfi, A Sanouj, B Chaput, A Coste, B Sallerin, A Varin

Skin healing is a complex and dynamic physiological process that follows mechanical alteration of the skin barrier. Under normal conditions, this complex process can be divided into at least three continuous and overlapping phases: an inflammatory reaction, a proliferative phase that leads to tissue reconstruction and a phase of tissue remodeling. Macrophages critically contribute to the physiological cascade for tissue repair. In fact, as the inflammatory phase progresses, macrophage gene expression gradually shifts from pro-inflammatory M1-like to pro-resolutive M2-like characteristics, which is critical for entry into the repair phase. A dysregulation in this macrophage' shift phenotype leads to the persistence of the inflammatory phase. Mesenchymal stromal cells and specifically the MSC-derived from adipose tissue (ADSCs) are more and more use to treat inflammatory diseases and several studies have demonstrated that ADSCs promote the wound healing thanks to their neoangiogenic, immunomodulant and regenerative properties. In several studies, ADSCs and macrophages have been injected directly into the wound bed, but the delivery of exogenous cells directly to the wound raise the problem of cell engraftment and preservation of pro-resolutive phenotype and viability of the cells. Complementary approaches have therefore been explored, such as the use of biomaterials enriched with therapeutic cell to improve cell survival and function. This review will present a background of the current scaffold models, using adipose derived stromal-cells and macrophage as therapeutic cells for wound healing, through a discussion on the potential impact for future applications in skin regeneration. According to the PRISMA statement, we resumed data from investigations reporting the use ADSCs and bioscaffolds and data from macrophages behavior with functional biomaterials in wound healing models. In the era of tissue engineering, functional biomaterials, that can maintain cell delivery and cellular viability, have had a profound impact on the development of dressings for the treatment of chronic wounds. Promising results have been showed in pre-clinical reports using ADSCs- and macrophages-based scaffolds to accelerate and to improve the quality of the cutaneous healing.

皮肤愈合是皮肤屏障发生机械性改变后的一个复杂而动态的生理过程。在正常情况下,这一复杂的过程至少可分为三个连续而重叠的阶段:炎症反应阶段、导致组织重建的增殖阶段和组织重塑阶段。巨噬细胞对组织修复的生理级联起着至关重要的作用。事实上,随着炎症阶段的进展,巨噬细胞的基因表达逐渐从促炎症的 M1 类特征转变为促复原的 M2 类特征,这对进入修复阶段至关重要。巨噬细胞的这种表型转变失调会导致炎症期的持续。间充质基质细胞,特别是源自脂肪组织的间充质干细胞(ADSCs)越来越多地被用于治疗炎症性疾病,多项研究表明,ADSCs具有新血管生成、免疫调节和再生特性,可促进伤口愈合。有几项研究将 ADSCs 和巨噬细胞直接注射到伤口床,但将外源性细胞直接注射到伤口会引起细胞接种、保持细胞的亲溶表型和活力等问题。因此,人们探索了一些补充方法,如使用富含治疗细胞的生物材料来提高细胞的存活率和功能。本综述将介绍目前使用脂肪基质细胞和巨噬细胞作为治疗细胞促进伤口愈合的支架模型的背景,并讨论其对未来皮肤再生应用的潜在影响。根据 PRISMA 声明,我们恢复了报告使用 ADSCs 和生物支架的研究数据,以及在伤口愈合模型中使用功能性生物材料的巨噬细胞行为数据。在组织工程时代,能维持细胞输送和细胞活力的功能性生物材料对治疗慢性伤口的敷料开发产生了深远的影响。临床前报告显示,使用以 ADSCs 和巨噬细胞为基础的支架可以加速皮肤愈合并提高愈合质量,结果令人欣喜。
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引用次数: 0
Correction: Reprogramming hematopoietic stem cell metabolism in lung cancer: glycolysis, oxidative phosphorylation, and the role of 2-DG. 更正:肺癌造血干细胞新陈代谢重编程:糖酵解、氧化磷酸化和 2-DG 的作用。
IF 5.7 2区 生物学 Q1 BIOLOGY Pub Date : 2024-09-20 DOI: 10.1186/s13062-024-00527-5
Ziqi Guo, Yaping Liu, Xin Li, Yuying Huang, Zuping Zhou, Cheng Yang
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引用次数: 0
ZFP64 drives glycolysis-mediated stem cell-like properties and tumorigenesis in breast cancer ZFP64 驱动糖酵解介导的乳腺癌干细胞样特性和肿瘤发生
IF 5.5 2区 生物学 Q1 BIOLOGY Pub Date : 2024-09-18 DOI: 10.1186/s13062-024-00533-7
Jiayi Sun, Jinquan Liu, Yudong Hou, Jianheng Bao, Teng Wang, Longbi Liu, Yidan Zhang, Rui Zhong, Zhenxuan Sun, Yan Ye, Jintao Liu
Breast cancer (BC) is a great clinical challenge because of its aggressiveness and poor prognosis. Zinc Finger Protein 64 (ZFP64), as a transcriptional factor, is responsible for the development and progression of cancers. This study aims to investigate whether ZFP64 regulates stem cell-like properties and tumorigenesis in BC by the glycolytic pathway. It was demonstrated that ZFP64 was overexpressed in BC specimens compared to adjacent normal tissues, and patients with high ZFP64 expression had shorter overall survival and disease-free survival. The analysis of the association of ZFP64 expression with clinicopathological characteristics showed that high ZFP64 expression is closely associated with N stage, TNM stage, and progesterone receptor status. Knockdown of ZFP64 suppressed the viability and colony formation capacity of BC cells by CCK8 and colony formation assays. The subcutaneous xenograft models revealed that ZFP64 knockdown reduced the volume of formatted tumors, and decreased Ki67 expression in tumors. The opposite effects on cell proliferation and tumorigenesis were demonstrated by ZFP64 overexpression. Furthermore, we suggested that the stem cell-like properties of BC cells were inhibited by ZFP64 depletion, as evidenced by the decreased size and number of formatted mammospheres, the downregulated expressions of OCT4, Nanog, and SOX2 proteins, as well as the reduced proportion of CD44+/CD24− subpopulations. Mechanistically, glycolysis was revealed to mediate the effect of ZFP64 using mRNA-seq analysis. Results showed that ZFP64 knockdown blocked the glycolytic process, as indicated by decreasing glycolytic metabolites, inhibiting glucose consumption, and reducing lactate and ATP production. As a transcription factor, we identified that ZFP64 was directly bound to the promoters of glycolysis-related genes (ALDOC, ENO2, HK2, and SPAG4), and induced the transcription of these genes by ChIP and dual-luciferase reporter assays. Blocking the glycolytic pathway by the inhibition of glycolytic enzymes ENO2/HK2 suppressed the high proliferation and stem cell-like properties of BC cells induced by ZFP64 overexpression. These data support that ZFP64 promotes stem cell-like properties and tumorigenesis of BC by activating glycolysis in a transcriptional mechanism.
乳腺癌(BC)因其侵袭性强、预后差而成为临床上的一大难题。锌指蛋白64(ZFP64)作为一种转录因子,对癌症的发生和发展负有责任。本研究旨在探讨ZFP64是否通过糖酵解途径调控BC的干细胞样特性和肿瘤发生。研究表明,与邻近的正常组织相比,ZFP64在BC标本中过表达,ZFP64高表达的患者总生存期和无病生存期较短。ZFP64表达与临床病理特征的关联分析表明,ZFP64的高表达与N分期、TNM分期和孕激素受体状态密切相关。通过CCK8和集落形成试验,敲除ZFP64抑制了BC细胞的活力和集落形成能力。皮下异种移植模型显示,ZFP64的敲除减少了成形肿瘤的体积,并降低了肿瘤中Ki67的表达。ZFP64过表达则对细胞增殖和肿瘤发生产生了相反的影响。此外,我们还发现,BC细胞的干细胞样特性受到了ZFP64耗竭的抑制,这表现在成形乳球的大小和数量减少,OCT4、Nanog和SOX2蛋白的表达下调,以及CD44+/CD24-亚群比例降低。mRNA-seq分析揭示了糖酵解介导ZFP64效应的机制。结果显示,ZFP64基因敲除阻断了糖酵解过程,表现为糖酵解代谢产物减少、葡萄糖消耗受到抑制、乳酸和ATP生成减少。作为一种转录因子,我们发现 ZFP64 直接与糖酵解相关基因(ALDOC、ENO2、HK2 和 SPAG4)的启动子结合,并通过 ChIP 和双荧光素酶报告实验诱导了这些基因的转录。通过抑制糖酵解酶ENO2/HK2阻断糖酵解途径,抑制了ZFP64过表达诱导的BC细胞的高增殖和干细胞样特性。这些数据支持ZFP64在转录机制中通过激活糖酵解促进BC的干细胞样特性和肿瘤发生。
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引用次数: 0
ARMCX1 inhibits lung adenocarcinoma progression by recruiting FBXW7 for c-Myc degradation ARMCX1 通过招募 FBXW7 降解 c-Myc 抑制肺腺癌的发展
IF 5.5 2区 生物学 Q1 BIOLOGY Pub Date : 2024-09-16 DOI: 10.1186/s13062-024-00532-8
Zhe Hu, Yilin Wu, Xiaoou Sun, Yanli Tong, Houkuang Qiu, Enqing Zhuo
Armadillo Repeat Containing X-Linked 1 (ARMCX1), a member of the ARM Repeat X-linked protein family, exerts inhibitory function in various tumors. However, its biological role in lung adenocarcinoma (LUAD) and the underlying molecular mechanisms require further exploration. LUAD tissue microarrays and bioinformatic databases were used to evaluate the relationship between ARMCX1 and clinicopathological features. The influence of ARMCX1 on LUAD cell proliferation, migration, and invasion in vitro was determined by colony formation, CCK-8, EdU incorporation, cell cycle, wound healing, and Transwell assays. The impact of ARMCX1 on LUAD cell growth and metastasis in vivo was determined by subcutaneously transplanted tumor and pulmonary metastasis assays. Western blot, immunoprecipitation, immunofluorescence, cycloheximide, and proteasome inhibitor assays were finally conducted to explore the potential underlying molecular mechanisms. ARMCX1 expression was downregulated in clinical LUAD samples due to which patient prognoses were poor. Functional experiments indicated that ARMCX1 overexpression inhibited the growth and metastasis of LUAD cells in vitro and in vivo. The molecular mechanism suggested that ARMCX1 recruits the E3 ubiquitin ligase FBXW7 for mediating ubiquitinated degradation of c-Myc, suppressing its nuclear accumulation, and ultimately inactivating cell cycle and epithelial-mesenchymal transition (EMT) signals. ARMCX1 inhibits LUAD cell proliferation and metastasis by interacting with c-Myc and enhancing its ubiquitination and degradation. Consequently, it can act as a tumor suppressor in this disease. These results suggest that ARMCX1 is a potential target in the treatment of LUAD.
犰狳重复含X连锁蛋白1(ARMCX1)是ARM重复X连锁蛋白家族的成员,在多种肿瘤中发挥抑制作用。然而,它在肺腺癌(LUAD)中的生物学作用及其潜在的分子机制还需要进一步探索。研究人员利用 LUAD 组织芯片和生物信息数据库评估了 ARMCX1 与临床病理特征之间的关系。通过菌落形成、CCK-8、EdU掺入、细胞周期、伤口愈合和Transwell试验确定了ARMCX1对体外LUAD细胞增殖、迁移和侵袭的影响。ARMCX1对LUAD细胞体内生长和转移的影响是通过皮下移植肿瘤和肺转移试验确定的。最后进行了 Western 印迹、免疫沉淀、免疫荧光、环己亚胺和蛋白酶体抑制剂检测,以探索潜在的分子机制。ARMCX1在临床LUAD样本中表达下调,导致患者预后不良。功能实验表明,ARMCX1的过表达抑制了LUAD细胞在体外和体内的生长和转移。分子机制表明,ARMCX1可招募E3泛素连接酶FBXW7,介导c-Myc的泛素化降解,抑制其核积累,最终使细胞周期和上皮-间质转化(EMT)信号失活。ARMCX1 通过与 c-Myc 相互作用,增强其泛素化和降解,从而抑制 LUAD 细胞的增殖和转移。因此,ARMCX1 可在该疾病中发挥肿瘤抑制因子的作用。这些结果表明,ARMCX1 是治疗 LUAD 的潜在靶点。
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引用次数: 0
Glucose deprivation-induced disulfidptosis in human nucleus pulposus cells: a novel pathological mechanism of intervertebral disc degeneration 葡萄糖剥夺诱导的人髓核细胞二硫化:椎间盘退化的一种新病理机制
IF 5.5 2区 生物学 Q1 BIOLOGY Pub Date : 2024-09-12 DOI: 10.1186/s13062-024-00528-4
Shaobo Wu, Jin Wang, Minglin Wang, Kaisheng Zhou, Dageng Huang, Yilei Zhang, Haihong Zhang
Limited supply of certain nutrients and deregulation of nucleus pulposus (NP) plays a key role in the pathogenesis of intervertebral disc degeneration (IVDD). However, whether nutrient deprivation-induced cell death, particularly disulfidptosis, contributes to the depletion of NP cells and the development of IVDD, is unknown. RNA-seq, single-cell RNA-seq, and Genome-wide DNA methylation datasets of nucleus pulposus tissue were collected for bioinformatic analysis. Predictive models of disulfidptosis related genes in IVDD were constructed by machine learning and their differential expression was analyzed. In addition, we performed cell subsets identification analysis, cell-cell communications analysis, and functional enrichment analysis of key genes in the core subset based on single-cell RNA-seq data of NP tissues isolated from one normal sample and one IVDD sample. Finally, glucose deprivation-induced disulfidptosis in human NP cells (HNPCs) was verified by various cell death inhibitors and disulfidptosis-related molecular markers. We found the disulfidptosis signal was significantly activated in the IVDD group. Using single-cell RNA-seq analysis, we focused on the chondrocytes and found that disulfidptosis-related genes significantly highly expressed in the IVDD C4 chondrocyte subset, which was identified as a new disulfidptosis-associated cell subset. Correlation analysis revealed the negative correlation between SLC7A11 (driving gene of disulfidptosis) and the glucose transporter GLUTs (SLC2A1-4) family genes (suppressing genes of disulfidptosis) in the IVDD group. We also found obvious cell death in HNPC upon glucose starvation, while employment of various cell death inhibitors could not inhibit glucose starvation-induced death in HNPCs. Moreover, the accumulation of disulfide bonds in cytoskeletal proteins was indicated by slowed migration in non-reducible protein blotting experiments. 2-DG, a key disulfidptosis inhibitor, significantly rescued cell death caused by glucose starvation through lowering the NADP+/NADPH ratio. We validated the occurrence of disulfidptosis in HPNCs and identified a novel disulfidptosis-associated cell subset, followed by experimental verification of disulfidptosis in a glucose-limited context to mimic a fall in nutrient supply during the development disc degeneration. These findings provided new insights into the pathological mechanisms of IVDD and encourage us to explore potential therapeutic targets involved in the regulation of disulfidptosis for the prevention of intervertebral disc degeneration.
某些营养物质的有限供应和髓核失调在椎间盘变性(IVDD)的发病机制中起着关键作用。然而,营养匮乏诱导的细胞死亡(尤其是二硫化硫)是否导致了髓核细胞的耗竭和 IVDD 的发展尚不清楚。研究人员收集了核团组织的RNA-seq、单细胞RNA-seq和全基因组DNA甲基化数据集进行生物信息学分析。通过机器学习构建了IVDD中二硫化相关基因的预测模型,并对其差异表达进行了分析。此外,我们还基于从一个正常样本和一个 IVDD 样本中分离出的 NP 组织的单细胞 RNA-seq 数据,对核心亚组中的关键基因进行了细胞亚组识别分析、细胞-细胞通讯分析和功能富集分析。最后,通过各种细胞死亡抑制剂和二硫化相关分子标记物验证了葡萄糖剥夺诱导的人NP细胞(HNPCs)二硫化。我们发现,IVDD组的二硫化硫信号被明显激活。通过单细胞RNA-seq分析,我们聚焦于软骨细胞,发现二硫化相关基因在IVDD C4软骨细胞亚群中明显高表达,并将其鉴定为一个新的二硫化相关细胞亚群。相关性分析表明,在IVDD组中,SLC7A11(二硫化硫的驱动基因)与葡萄糖转运体GLUTs(SLC2A1-4)家族基因(二硫化硫的抑制基因)呈负相关。我们还发现,在葡萄糖饥饿时,HNPC 的细胞明显死亡,而使用各种细胞死亡抑制剂并不能抑制葡萄糖饥饿诱导的 HNPC 死亡。此外,细胞骨架蛋白中二硫键的积累在非还原蛋白印迹实验中表现为迁移减慢。2-DG是一种关键的二硫键抑制剂,它能通过降低NADP+/NADPH比率显著缓解葡萄糖饥饿导致的细胞死亡。我们验证了二硫化硫在HPNCs中的存在,并发现了一个新的与二硫化硫相关的细胞亚群,随后在葡萄糖受限的情况下对二硫化硫进行了实验验证,以模拟椎间盘变性发展过程中营养供应的下降。这些发现为了解椎间盘突出症的病理机制提供了新的视角,并鼓励我们探索调控二硫化硫过程以预防椎间盘变性的潜在治疗靶点。
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引用次数: 0
Regulating ferroptosis by non-coding RNAs in hepatocellular carcinoma 肝细胞癌中的非编码 RNA 对铁突变的调控
IF 5.5 2区 生物学 Q1 BIOLOGY Pub Date : 2024-09-12 DOI: 10.1186/s13062-024-00530-w
Lijie Sun, Hongfei Cao, Yanzhe Wang, Hongquan Wang
Ferroptosis, a unique type of regulated cell death plays a vital role in inhibiting tumour malignancy and has presented new opportunities for treatment of therapy in hepatocellular carcinoma. Accumulating studies indicate that epigenetic modifications by non-coding RNAs, including microRNAs, long noncoding RNAs, and circular RNAs, can determine cancer cell vulnerability to ferroptosis in HCC. The present review first summarize the updated core molecular mechanisms of ferroptosis. We then provide a concised overview of epigenetic modification of ferroptosis in HCC. Finally, we review the recent progress in understanding of the ncRNA-mediated regulated mechanisms on ferroptosis in HCC. The review will promote our understanding of the ncRNA-mediated epigenetic regulatory mechanisms modulating ferroptosis in malignancy of HCC, highlighting a novel strategies for treatment of HCC through targeting ncRNA-ferroptosis axis.
铁突变是一种独特的调节性细胞死亡类型,在抑制肿瘤恶变方面发挥着重要作用,并为肝细胞癌的治疗提供了新的机会。不断积累的研究表明,非编码 RNA(包括 microRNA、长非编码 RNA 和环状 RNA)的表观遗传学修饰可决定 HCC 中癌细胞对铁突变的易感性。本综述首先总结了最新的铁变态反应核心分子机制。然后,我们简明扼要地概述了 HCC 中铁细胞凋亡的表观遗传修饰。最后,我们回顾了最近在了解 ncRNA 介导的 HCC 铁凋亡调控机制方面取得的进展。这篇综述将促进我们对 ncRNA 介导的表观遗传调控机制在 HCC 恶性肿瘤中调节铁凋亡的理解,并强调了通过靶向 ncRNA- 铁凋亡轴治疗 HCC 的新策略。
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引用次数: 0
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Biology Direct
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