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The Effect of Window Size on Pathologists' Search for Rare Elements in a Digital Pathology Setting. 窗口大小对病理学家在数字病理设置中搜索稀有元素的影响。
Pub Date : 2025-01-02 DOI: 10.5858/arpa.2024-0378-OA
Alana Lopes, Sean Rasmussen, Bojana Djordjevic, Jose A Gomez, Maria Florencia Mora, Anurag Sharma, Joanna C Walsh, Bret Wehrli, Aaron D Ward, Matthew J Cecchini

Context.—: Digital pathology requires pathologists to assess tissue digitally rather than on an analog microscope, which has been the mainstay tool for tissue assessment for more than a century. The impact of different digital interaction configurations on pathologists' performance is not well understood. This work focuses on the impact of the display window size for diagnostic assessment.

Objective.—: To determine the effect of digital image viewer window size on pathologists' diagnostic performance when searching for tumors in lymph nodes while under a time limit.

Design.—: Six pathologists assessed 8 breast lymph node whole slide images using 4 digital image viewer window sizes (8, 14, 24, and 32 inches) for tumors in lymph nodes while under a time limit. Eye-gaze data were collected. Pathologists were subsequently asked to rate their preference of window sizes.

Results.—: The fraction of window not covered with foveated vision was significantly associated with window size ranging from 43% for 32 inches to 5% for 8 inches (P < .001). There was no statistically significant relationship between the number of false negatives or assessment time and window size (P = .21 and P = .28, respectively). The distance traversed per panning instance ranged from 301 pixels for 32-inch to 193 pixels for 8-inch windows (P = .002). All pathologists preferred the largest window size as it provided more context for diagnostic assessment.

Conclusions.—: Window size does not significantly affect pathologists' diagnostic performance when searching for tumors in lymph nodes. However, pathologists adapted their slide navigation approach to accommodate the amount of context the window size permitted.

上下文。数字病理学要求病理学家以数字方式评估组织,而不是在模拟显微镜上,一个多世纪以来,模拟显微镜一直是组织评估的主要工具。不同数字交互配置对病理学家表现的影响尚不清楚。本工作主要研究显示窗口大小对诊断评估的影响。-:确定数字图像查看器窗口大小对病理学家在一定时间内搜索淋巴结肿瘤诊断性能的影响。-: 6名病理学家在限定时间内使用4种数字图像查看器窗口尺寸(8、14、24和32英寸)评估8张乳腺淋巴结全切片图像。收集眼球注视数据。病理学家随后被要求评价他们对窗口大小的偏好。-:未被注视视力覆盖的窗户比例与窗户尺寸显著相关,范围从32英寸的43%到8英寸的5% (P < 0.001)。假阴性数或评估时间与窗口大小之间无统计学意义(P = 0.21和P = 0.28)。每个平移实例遍历的距离从32英寸的301像素到8英寸窗口的193像素不等(P = 0.002)。所有病理学家都倾向于选择最大的窗口大小,因为它为诊断评估提供了更多的背景。-:窗口大小对病理学家寻找淋巴结肿瘤的诊断效果无显著影响。然而,病理学家调整了他们的幻灯片导航方法,以适应窗口大小允许的上下文数量。
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引用次数: 0
Plexiform Fibromyxoma. Plexiform Fibromyxoma .
Pub Date : 2025-01-02 DOI: 10.5858/arpa.2024-0254-RA
Julianne Szczepanski, Maria Westerhoff, Shula Schechter

Context.—: Plexiform fibromyxomas are uncommon gastrointestinal neoplasms that have histologic and molecular features that overlap with other gastrointestinal mesenchymal tumors and present a diagnostic challenge for surgical pathologists.

Objective.—: To provide a review of the clinicopathologic, morphologic, immunohistochemical, and molecular features of plexiform fibromyxomas, with a brief discussion of key features that aid in differential diagnosis.

Data sources.—: Analysis of the pertinent literature (PubMed) and clinical practice experience based on institutional and consultation materials.

Conclusions.—: Plexiform fibromyxoma is a rare benign gastrointestinal mesenchymal tumor. Diagnosis is primarily based on morphology, immunohistochemistry, and the exclusion of other gastrointestinal mesenchymal tumors from the differential diagnosis.

上下文。丛状纤维黏液瘤是一种罕见的胃肠道肿瘤,其组织学和分子特征与其他胃肠道间质肿瘤重叠,是外科病理学家诊断的一个挑战。综述丛状纤维黏液瘤的临床病理、形态学、免疫组织化学和分子特征,并简要讨论有助于鉴别诊断的关键特征。数据源。-:对相关文献(PubMed)和基于机构和咨询材料的临床实践经验进行分析。丛状纤维黏液瘤是一种罕见的良性胃肠道间质肿瘤。诊断主要基于形态学,免疫组织化学,并从鉴别诊断中排除其他胃肠道间质肿瘤。
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引用次数: 0
Age- and Sex-Dynamic Fluctuations and Reference Intervals for Alkaline Phosphatase Among the Spanish Population. 西班牙人口碱性磷酸酶的年龄和性别动态波动及参考区间。
Pub Date : 2025-01-01 DOI: 10.5858/arpa.2023-0335-OA
Laura Castells Vilella, Paula Sánchez-Pintos, José Félix Muñiz Llama, Matías Gámez Martínez, María Luz Couce, Jordi Antón

Context.—: Interpretation of alkaline phosphatase (ALP) activity is essential for the diagnosis of certain diseases. ALP changes during life and may vary between different populations.

Objective.—: To establish reference intervals (RIs) and percentile charts for ALP activity in the Spanish population through a multicentric observational study and to compare the RIs to those defined in other countries.

Design.—: A total of 662 350 ALP measurements from individuals ages 0 to 99 years from 9 Spanish tertiary care centers collected between 2020 and 2022 were analyzed. This study is the largest published on this topic in the literature to date.

Results.—: Continuous percentile charts for ALP according to sex and age were established which can be used as RIs. Higher levels are reached during the first weeks of life. In puberty, a differential evolution is observed in both sexes, reaching a peak at 10 to 13 years of age in boys and remaining stable in girls at this age. Significant differences were also observed in adults, higher in men between ages 20 and 49 years and between ages 50 and 79 years in women, as reported in some countries.

Conclusions.—: ALP activity follows an age- and sex-dependent fluctuation with geographic differences. It is important to have appropriate reference values for each population in order to allow for a correct diagnostic interpretation and early diagnosis of diseases related to ALP abnormalities.

背景解读碱性磷酸酶(ALP)活性对诊断某些疾病至关重要。ALP 在人的一生中会发生变化,在不同人群中也会有所不同:通过一项多中心观察研究,确定西班牙人群中 ALP 活性的参考区间(RIs)和百分位图,并将 RIs 与其他国家确定的 RIs 进行比较:分析了 2020 年至 2022 年期间从西班牙 9 个三级医疗中心收集的 0 至 99 岁人群的 662 350 次 ALP 测量结果。这项研究是迄今为止发表的文献中规模最大的一项研究:根据性别和年龄建立了连续的 ALP 百分位图,可用作相关指数。生命最初几周的ALP水平较高。在青春期,男女两性的变化有所不同,男孩在 10-13 岁时达到峰值,而女孩在这个年龄段保持稳定。在成人中也观察到显著差异,如一些国家报告的那样,男性在 20 至 49 岁之间,女性在 50 至 79 岁之间,ALP 活性较高:结论:ALP 活性随年龄和性别波动,并存在地域差异。重要的是,每个人群都要有适当的参考值,以便正确诊断和早期诊断与 ALP 异常有关的疾病。
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引用次数: 0
Tissue Prior to the Initial Hematoxylin-Eosin Section Demonstrates Value as an Alternative Source of DNA for Molecular Testing. 在初始苏木精-伊红切片之前的组织证明了作为分子测试DNA的替代来源的价值。
Pub Date : 2024-12-31 DOI: 10.5858/arpa.2024-0222-OA
Peter Sabatini, Robert Ta, Melanie Peralta, Melanie Anderson, Shehnaz Khan, Rosetta Belcastro, Andrea Arruda, Mark David Minden, Michael Cabanero, Anca Prica, Tong Zhang, Robert Kridel, Tracy Stockley, Daniel Xia

Context.—: Small biopsies are used for histologic, immunophenotypic, cytogenetic, molecular genetic, and other ancillary studies. Occasionally, this diagnostic tissue is exhausted before molecular testing can be performed.

Objective.—: To investigate a simple banking protocol for currently discarded tissues trimmed off prior to the initial hematoxylin-eosin section, as an alternative source of DNA for molecular studies.

Design.—: Mock biopsies of lung adenocarcinomas, benign testes, and B-cell lymphomas were constructed from biobank blocks; these simulated biopsies were assessed via epidermal growth factor receptor (EGFR) p.L858R droplet digital polymerase chain reaction (PCR), Biomed B-cell clonality testing by PCR, or a custom next-generation sequencing panel for lymphomas. For each cancer mock biopsy, DNA amounts and molecular test results from the "trimmings" samples were compared to data from corresponding molecular samples acquired via a "standard" clinical protocol.

Results.—: The data show that although trimmings samples usually contained less DNA than standard samples, both sample classes generally had sufficient DNA for testing and produced essentially identical molecular results. A single sample showed low-level carryover contamination on droplet digital PCR testing.

Conclusions.—: Tissue trimmings banked by using the studied protocol demonstrated value as a potential alternative sample for molecular testing.

上下文。小型活组织检查用于组织学、免疫表型、细胞遗传学、分子遗传学和其他辅助研究。有时,在进行分子检测之前,该诊断组织已耗尽。-:研究一种简单的储存方案,用于在初始苏木精-伊红切片之前修剪的当前丢弃的组织,作为分子研究的另一种DNA来源。-:利用生物库块构建肺腺癌、良性睾丸和b细胞淋巴瘤的模拟活检;这些模拟活检通过表皮生长因子受体(EGFR) p.L858R液滴数字聚合酶链反应(PCR)、Biomed b细胞克隆检测或定制的下一代淋巴瘤测序面板进行评估。对于每个癌症模拟活检,将“修剪”样本的DNA数量和分子检测结果与通过“标准”临床方案获得的相应分子样本的数据进行比较。-:数据显示,虽然修剪样品通常比标准样品含有更少的DNA,但两类样品通常具有足够的DNA进行测试,并产生基本相同的分子结果。单个样品在液滴数字PCR检测中显示出低水平的携带性污染。-:使用所研究的方案储存的组织切屑显示了作为分子测试的潜在替代样品的价值。
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引用次数: 0
Prognostic Implications of the Bethesda System in Fine-Needle Aspiration for Follicular Thyroid Carcinoma. Bethesda系统细针穿刺治疗滤泡性甲状腺癌的预后意义。
Pub Date : 2024-12-30 DOI: 10.5858/arpa.2024-0304-OA
Hyunju Park, Young Lyun Oh, Myoung Kyoung Kim, Soo Yeon Hahn, Jun-Ho Choe, Man Ki Chung, Bogyeong Han, Sun Wook Kim, Jae Hoon Chung, Tae Hyuk Kim

Context.—: Fine-needle aspiration is an effective tool for sampling thyroid nodules; its results are classified according to the Bethesda System for Reporting Thyroid Cytopathology (BSRTC), whose categories define malignancy risks.

Objective.—: To compare the histologic outcomes and disease-free survival (DFS) with the preceding BSRTC categories, we hypothesized that the initial cytologic categories may reflect long-term outcomes in follicular thyroid carcinoma (FTC), similar to those observed in papillary thyroid carcinoma.

Design.—: This retrospective study enrolled 134 patients with FTC who underwent preoperative cytology between April 2011 and December 2020. Results were classified into 6 categories according to the BSRTC: nondiagnostic, benign, atypia of uncertain significance (AUS), follicular neoplasm (FN), suspicious for malignancy, or malignant.

Results.—: Overall, 8 of 134 patients (6.0%) were categorized as having a nondiagnostic FTC, 35 of 134 (26.1%) as benign, 51 of 134 (38.1%) as AUS, and 40 of 134 (29.9%) as FN. No lesions were classified as suspicious for malignancy or malignant. The nondiagnostic, AUS, and FN categories were associated with a progressively higher risk of vascular invasion, disease recurrence, and high-risk FTC, based on the 2022 World Health Organization classification (P for trend = .01, .01, and .01, respectively). Disease-free survival was lower in the FN group (log-rank P = .01).

Conclusions.—: The initial BSRTC results may reflect not only the risk of malignancy but also the presence of vascular invasion and poor prognosis when the thyroid nodule is diagnosed as FTC. These results may provide prognostic information for therapeutic decision-making and clinical management of FTC.

上下文。-:细针穿刺是甲状腺结节取样的有效工具;其结果根据Bethesda甲状腺细胞病理学报告系统(BSRTC)进行分类,其分类定义了恶性肿瘤风险。为了比较组织学结果和无病生存期(DFS)与之前的BSRTC分类,我们假设初始细胞学分类可能反映滤泡性甲状腺癌(FTC)的长期结果,类似于甲状腺乳头状癌的观察结果。-:这项回顾性研究纳入了134例FTC患者,他们在2011年4月至2020年12月期间接受了术前细胞学检查。结果根据BSRTC分为6类:非诊断性、良性、意义不确定异型(AUS)、滤泡性肿瘤(FN)、可疑恶性、恶性。总体而言,134例患者中有8例(6.0%)被归类为非诊断性FTC, 35例(26.1%)为良性,51例(38.1%)为AUS, 40例(29.9%)为FN。未发现可疑恶性或恶性病变。根据2022年世界卫生组织的分类,非诊断性、AUS和FN分类与血管侵犯、疾病复发和高风险FTC的风险逐渐升高相关(趋势P分别= 0.01、0.01和0.01)。FN组无病生存率较低(log-rank P = 0.01)。-:当甲状腺结节被诊断为FTC时,最初的BSRTC结果可能不仅反映了恶性肿瘤的风险,还反映了存在血管侵犯和预后不良。这些结果可为FTC的治疗决策和临床管理提供预后信息。
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引用次数: 0
Clinical Molecular Testing for Clonal Relatedness of Second Melanoma Tumors. 第二代黑色素瘤克隆相关性的临床分子检测。
Pub Date : 2024-12-26 DOI: 10.5858/arpa.2024-0267-OA
Jaclyn M Plotzke, David Manthei, Douglas R Fullen, May P Chan, Scott C Bresler, Hong Xiao, Aleodor A Andea, Paul W Harms

Context.—: Patients with melanoma can develop second tumors representing either metastases or new primary melanoma. This distinction has profound implications for management. Although clinicopathologic features are often sufficient, molecular assays can support the presence or absence of clonal relatedness in challenging cases. However, the potential for false-positive and false-negative results in this context is not well described.

Objective.—: To evaluate clinical molecular assays used to determine whether melanoma tumors represent primary-metastasis pairs or unrelated tumors.

Design.—: We identified clinical cases at our institution in which paired melanocytic tumors were analyzed for clonal relatedness by molecular assays. Results were compared against data sets and/or controls to establish the likelihood that paired tumors were clonally related.

Results.—: In total, 12 pairs were evaluated by single-nucleotide polymorphism (SNP) array, targeted next-generation sequencing (NGS), or both. SNP array predicted relatedness in 5 of 9 cases and unrelatedness in 4 cases. In SNP comparisons, whole-chromosomal and arm-level changes were often nonspecific (coincidentally similar between unrelated tumors). Targeted NGS predicted relatedness in 2 of 4 cases and unrelatedness in 1 case, and was equivocal/noncontributory in 1 case. For targeted NGS, nonspecific (coincidentally similar) results were related to recurrent oncogenic drivers or pairs lacking detected oncogene mutations.

Conclusions.—: The genome-wide analysis provided by SNP array was optimal for assessment of clonality. Targeted NGS can be informative but may be equivocal in some cases. The choice of assay may rely upon considerations including the amount of DNA, likelihood of distinctive mutations, and need for therapeutic target identification.

上下文。-:黑色素瘤患者可以发展第二肿瘤,代表转移或新的原发性黑色素瘤。这种区别对管理有着深远的影响。虽然临床病理特征往往是足够的,分子分析可以支持克隆相关性的存在或不存在的挑战的情况下。然而,在这种情况下假阳性和假阴性结果的可能性并没有得到很好的描述。-:评价用于确定黑色素瘤肿瘤是否代表原发转移对或不相关肿瘤的临床分子分析。-:我们确定了我们机构的临床病例,其中配对黑色素细胞肿瘤通过分子测定分析克隆相关性。将结果与数据集和/或对照进行比较,以确定配对肿瘤具有克隆相关性的可能性。-:通过单核苷酸多态性(SNP)阵列、靶向下一代测序(NGS)或两者同时评估12对。SNP阵列预测9例中有5例有相关性,4例无相关性。在SNP比较中,全染色体和臂水平的变化通常是非特异性的(巧合的是,不相关的肿瘤之间相似)。靶向NGS预测4例中2例有相关性,1例无相关性,1例不明确或无贡献。对于靶向NGS,非特异性(巧合相似)结果与复发性致癌驱动因子或缺乏检测到的癌基因突变对有关。-: SNP阵列提供的全基因组分析是评估克隆性的最佳方法。有针对性的NGS可以提供信息,但在某些情况下可能模棱两可。测定方法的选择可能取决于考虑因素,包括DNA的数量,独特突变的可能性,以及治疗目标识别的需要。
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引用次数: 0
Online Portal Use of Pathology Reports in Patients With Solid Tumors. 实体肿瘤患者病理报告的在线门户使用。
Pub Date : 2024-12-26 DOI: 10.5858/arpa.2024-0327-OA
Amber Y Bo, Yee Chung Cheng, Ben George, Deepak Kilari, Jonathan R Thompson, Julie M Jorns

Context.—: Patients can now immediately review pathology reports via online health portals.

Objective.—: To better characterize patient perceptions of pathology report helpfulness and preferences for access of pathology reports via a patient portal.

Design.—: Semistructured interviews were conducted with oncology patients with breast, endocrine, gastrointestinal, genitourinary, and thoracic malignancies. Patient demographic information, cancer type, question responses, and thematically grouped comments were statistically analyzed.

Results.—: Among 230 patients, there was equal sex distribution (116 of 230, 50.4% female; 114 of 230, 49.6% male). Patients who viewed or had a support member view their reports in the portal (172 of 230; 74.8%) differed from those who did not (58 of 230; 25.2%) only in perception of helpfulness (P < .001) of the report. Difficulty understanding medical terminology was the most frequently cited challenge among both those who found the reports helpful (30 of 160; 18.75%) and not helpful (31 of 46; 67.4%). Most patients (196 of 230; 85.2%) preferred immediate release of results, even if the news was bad, whereas some (34 of 230; 14.7%) would opt out of immediate release for fear of misunderstanding (11 of 34; 32.4%) or receiving distressing information from reading the report (23 of 34; 67.6%).

Conclusions.—: Options for portal flexibility (ie, patient choice of opting for immediate release of some, but not all, results), patient-centered pathology reports, educational materials, clinician preparation of patients, and tailored patient support are strategies that can help more patients benefit from reviewing pathology report information.

上下文。-:患者现在可以通过在线健康门户网站立即查看病理报告。-:更好地描述患者对病理报告有用性的看法,以及通过患者门户访问病理报告的偏好。-:对患有乳腺、内分泌、胃肠道、泌尿生殖系统和胸部恶性肿瘤的肿瘤患者进行半结构化访谈。对患者人口统计信息、癌症类型、问题回答和主题分组评论进行统计分析。-: 230例患者中,性别分布均匀(230例中116例,女性50.4%;230人中114人(49.6%男性)。查看或有支持成员在门户网站查看他们的报告的患者(230人中有172人;74.8%)与没有(230人中有58人;25.2%)仅在报告的“乐于助人”感知上(P < 0.001)。在发现报告有帮助的两个人中,理解医学术语困难是最常提到的挑战(160人中有30人;18.75%)和无帮助(46人中有31人;67.4%)。大多数患者(196 / 230;85.2%的受访者表示,即使是坏消息,也希望立即公布结果。14.7%)会因为害怕误解而选择不立即释放(34人中有11人;32.4%)或从阅读报告中获得令人不安的信息(34人中有23人;67.6%) .Conclusions。-:门户灵活性选项(即患者选择立即释放部分结果,但不是全部结果),以患者为中心的病理报告,教育材料,临床医生对患者的准备以及量身定制的患者支持是可以帮助更多患者从审查病理报告信息中受益的策略。
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引用次数: 0
Technical Competency Assessment of Peripheral Blood Smears: Tools and Trends Learned From 2 College of American Pathologists Q-Probes Studies. 外周血涂片的技术能力评估:从美国病理学家q探针研究学会的工具和趋势。
Pub Date : 2024-12-24 DOI: 10.5858/arpa.2024-0259-CP
Jeffrey A Vos, Girish Venkataraman, Liuyan Jennifer Jiang, Barbara J Blond, Suzanne Coulter, Rhona J Souers

Context.—: Morphologic evaluation of peripheral blood smears provides valuable information to diagnose and manage a variety of hematologic disorders.

Objective.—: To measure the competency of the technical staff in the morphologic evaluation of peripheral blood smears and provide performance trends.

Design.—: Participating technologists accessed 10 whole slide-imaged peripheral blood smears through a web-based imaging tool in 2 separate studies. Participants performed a 100-cell differential and morphologic evaluation for each slide image. Grading criteria, determined by 3 hematopathologists, were weighted according to their clinical significance (score range, 0-100 for each case). Each institution and participant answered a questionnaire to assess the impact of current practices and educational programs on competency scores.

Results.—: A total of 776 technologists from 92 institutions participated in study 1 and 1495 technologists from 179 institutions participated in study 2. Median performance scores for institutions were 78.9 and 87.6 for studies 1 and 2, respectively, encompassing a range of hematologic disorders. Based on results of the questionnaire for study 1, higher performance scores were seen when institutions required a specific number of continuing education credits per year through an agency (P = .005). In study 2, institutions with remediation procedures following a failed competency demonstrated higher performance scores (P = .03).

Conclusions.—: Medical technologist competency of peripheral blood smears improves with level of experience and is positively impacted through attending educational programs. Whole slide images offer a convenient means of assessing technical competence and provide data to allow institutions to appropriately focus their procedures and educational efforts.

上下文。目的:外周血涂片的形态学评价为各种血液病的诊断和治疗提供有价值的信息。-:衡量技术人员在外周血涂片形态学评估方面的能力,并提供绩效趋势。-:参与研究的技术人员通过基于网络的成像工具在两项独立的研究中获取了10张完整的外周血涂片。参与者对每张幻灯片图像进行了100个细胞的差异和形态学评估。评分标准由3名血液病理学家根据其临床意义进行加权(评分范围为0-100)。每个机构和参与者都回答了一份问卷,以评估当前实践和教育计划对能力得分的影响。-:共有来自92间机构的776名技术人员参与研究一,而来自179间机构的1495名技术人员参与研究二。在研究1和研究2中,机构的平均表现得分分别为78.9和87.6,包括一系列血液系统疾病。根据研究1的问卷调查结果,当机构每年通过代理机构要求特定数量的继续教育学分时,表现得分更高(P = 0.005)。在研究2中,在失效胜任力后采取补救措施的机构表现出更高的绩效得分(P = .03)。-:医学技术人员外周血涂片的能力随着经验水平的提高而提高,并通过参加教育项目而受到积极影响。整个幻灯片图像提供了一种方便的评估技术能力的手段,并提供数据,使机构能够适当地集中其程序和教育工作。
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引用次数: 0
The Significance of Detecting an Unusual Myeloblast Immunophenotype in a Presumptive Clinical Diagnosis of Myelodysplastic Syndromes. 检测异常成髓细胞免疫表型在骨髓增生异常综合征推定临床诊断中的意义。
Pub Date : 2024-12-23 DOI: 10.5858/arpa.2024-0228-OA
Fnu Sameeta, Wei Wang, Fatima Zahra Jelloul, Okechukwu V Nwogbo, Beenu Thakral, Jie Xu, Shaoying Li, Chi Young Ok, Guilin Tang, Fuli Jia, L Jeffrey Medeiros, Sanam Loghavi, Jeffrey L Jorgensen, Sa A Wang

Context.—: Blasts in myelodysplastic syndromes (MDSs) typically have a primitive myeloid immunophenotype (CD34+CD117+CD13+CD33+HLA-DR+). On rare occasions, blasts were found to be CD34 negative or minimally expressed in a presumptive MDS.

Objective.—: To investigate the occurrence of these cases, and to examine any unique molecular genetic features, and clinical relevance.

Design.—: Over 2000 flow cytometry immunophenotyping tests for MDS performed during a 5-year period were retrospectively reviewed. Chronic myelomonocytic leukemia and overt acute myeloid leukemia (AML) (≥20% blasts) were excluded.

Results.—: Approximately 800 cases had abnormal myeloblasts consistent with myeloid neoplasms; 96% of cases showed a typical primitive phenotype, but 31 patients (4%) had unusual blasts that were either completely or partially negative for CD34. Of the latter, recurrent genetic abnormalities were identified in 13 (42%) including 10 with nucleophosmin 1 (NPM1) mutation, 1 with lysine methyltransferase 2A (KMT2A) rearrangement, and 2 with t(3;5)(q25.3;q35.1)/NPM1::myeloid leukemia factor 1 (MLF1). These cases were classified as MDS prior to the 2022 classifications, but 9 of 13 (69%) and 7 of 13 (52%) cases would be reclassified as AML according to the 5th edition of the World Health Organization classification and the International Consensus Classification, respectively. Eight cases (26%) had multihit tumor protein p53 (TP53) mutation, and 6 of them were ultimately diagnosed as or quickly evolved to pure erythroid leukemia. Of the remaining 10 cases, 4 uncharacteristically had no detectable molecular genetic abnormalities.

Conclusions.—: Our data show that, if a presumptive MDS shows a nonprimitive blast phenotype, caution is needed to rule out AML with recurrent genetic abnormality with an oligoblastic presentation, high-risk myeloid neoplasms with double-hit TP53 mutation with abnormal erythroid proliferation, and MDS with molecular-genetic and clinical features more akin to AML.

上下文。-:骨髓增生异常综合征(mds)中的母细胞通常具有原始骨髓免疫表型(CD34+CD117+CD13+CD33+HLA-DR+)。在极少数情况下,在假定的mds中发现CD34阴性或最低表达。-:调查这些病例的发生情况,并检查任何独特的分子遗传特征及其临床相关性。-:回顾性回顾了5年期间进行的2000多项MDS流式细胞术免疫分型试验。排除慢性髓细胞白血病和急性髓细胞白血病(AML)(≥20%原细胞)。-:约800例患者存在与髓系肿瘤相符的异常成髓细胞;96%的病例表现为典型的原始表型,但31例(4%)患者具有不寻常的原细胞,CD34完全或部分阴性。在后者中,13例(42%)发现复发性遗传异常,包括10例核磷蛋白1 (NPM1)突变,1例赖氨酸甲基转移酶2A (KMT2A)重排,2例t(3;5)(q25.3;q35.1)/NPM1::髓系白血病因子1 (MLF1)。这些病例在2022年分类之前被归类为MDS,但根据世界卫生组织第5版分类和国际共识分类,13例中有9例(69%)和13例中有7例(52%)将分别被重新归类为AML。8例(26%)发生多打肿瘤蛋白p53 (TP53)突变,其中6例最终诊断为或迅速发展为纯红细胞白血病。在其余10例中,4例异常地没有可检测到的分子遗传异常。-:我们的数据显示,如果假定的MDS表现为非原始母细胞表型,则需要谨慎排除具有复发性遗传异常并具有少母细胞表现的AML,具有双击TP53突变并异常红细胞增殖的高危髓系肿瘤,以及具有更类似于AML的分子遗传学和临床特征的MDS。
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引用次数: 0
Deployment of a Machine Learning Algorithm in a Real-World Cohort for Quality Control Monitoring of Human Epidermal Growth Factor-2-Stained Clinical Specimens in Breast Cancer. 在真实世界队列中部署机器学习算法,用于乳腺癌中人类表皮生长因子-2染色临床标本的质量控制监测。
Pub Date : 2024-12-18 DOI: 10.5858/arpa.2024-0111-OA
Benjamin Glass, Michel E Vandenberghe, Surya Teja Chavali, Syed Ashar Javed, Murray Resnick, Harsha Pokkalla, Hunter Elliott, Sudha Rao, Shamira Sridharan, Jacqueline A Brosnan-Cashman, Ilan Wapinski, Michael Montalto, Andrew H Beck, Craig Barker

Context.—: Precise determination of biomarker status is necessary for clinical trial enrollment and endpoint analyses, as well as for optimal treatment determination in real-world practice. However, variabilities may be introduced into this process due to the processing of clinical specimens by different laboratories and assessment by distinct pathologists. Machine learning tools have the potential to minimize inconsistencies, although their use is not presently widespread.

Objective.—: To assess the applicability of machine learning to the quality control process for biomarker scoring in oncology, we developed and validated an automated machine learning model to be applied as a quality control tool for monitoring the assessment of human epidermal growth factor-2 (HER2).

Design.—: The model was trained using whole slide images from multiple sources to quantify HER2 expression and measure immunohistochemistry stain intensity, tumor area, and the presence of artifacts or ductal carcinoma in situ across breast cancer phenotypes. The quality control tool was deployed in a real-world cohort of HER2-stained breast cancer sample images collected from routine diagnostic practice to evaluate trends in HER2 testing quality indicators and between pathology laboratories.

Results.—: Automated image analysis for HER2 scoring is consistent and reliable using this algorithm. Deployment of the HER2 quality control tool across 3 clinical laboratories revealed interlaboratory variability in HER2 scoring and inconsistencies in data reporting.

Conclusions.—: These results support the future incorporation of quality control algorithms for real-time monitoring of clinical laboratories contributing to clinical trials in oncology and in the real-world setting of HER2 immunohistochemistry testing in local clinical laboratories and hospitals.

上下文。-:生物标志物状态的精确测定对于临床试验入组和终点分析,以及在现实实践中确定最佳治疗是必要的。然而,由于不同实验室对临床标本的处理和不同病理学家的评估,可能会在这一过程中引入变数。机器学习工具有可能将不一致性降到最低,尽管它们的使用目前还没有得到广泛应用。为了评估机器学习在肿瘤生物标志物评分质量控制过程中的适用性,我们开发并验证了一个自动机器学习模型,该模型将被用作监测人类表皮生长因子-2 (HER2)评估的质量控制工具。-:使用来自多个来源的整张幻灯片图像对模型进行训练,以量化HER2表达,并测量免疫组织化学染色强度、肿瘤面积以及各种乳腺癌表型中伪影或导管原位癌的存在。质量控制工具应用于从常规诊断实践中收集的HER2染色乳腺癌样本图像的真实队列中,以评估HER2检测质量指标和病理实验室之间的趋势。-:使用该算法进行HER2评分的自动图像分析是一致和可靠的。在3个临床实验室中部署HER2质量控制工具,揭示了HER2评分在实验室间的差异和数据报告的不一致性。-:这些结果支持未来将质量控制算法纳入临床实验室的实时监测,有助于肿瘤学临床试验和当地临床实验室和医院的HER2免疫组织化学测试的现实环境。
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Archives of pathology & laboratory medicine
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